DK957556 |
Clone id |
TST39A01NGRL0028_K23 |
Library |
TST39 |
Length |
611 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0028_K23. 5' end sequence. |
Accession |
DK957556 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL2849Contig1 |
Sequence |
GAAATTCTGTAGAAAAGTACCCTGCGTATCCATATCAGAGAAAAGTCCGTCGCCCTCTGC TGCGGCGCACCTGCGAGGCTTCAAAAACTGCTGTGCACCTGCGAGGCTTGCAAGCGACGT GTGTTGCAGCACACTGCTGCTACGCACCTACAACCTGGGATTTGGGGCCTGAGCGAACTT GTACCTGCGGCCAGCTGCAAACTGTGTTTTATCTATGTATCTGCAGGGTTTGGTGACTGA GTTTTGACTGTCCAGACAGGTCTATTGGAGTATGTGGCTTTGAAACCGTACACTCCTTCA CTTGAATCAATGGCAGCTTTAATCGATGGGTTGCCAGATGCTGTTGCCTTGCAGTGCCTA GCACGAGTGCCACTTAGTAGTCATCCTTTCATGAGGGCTGTCAATCGTGCTTGGAGATCT CATCTTTGCAGTGAGGAGTTTTATAAACTGAGAGACGAAACAGGAAGCTCTGAGGAATGG CTATACGTCTCTGCACGTGACCCAGATAACGTCTGGCAGGCTTTTGACCCATCCTGCAAT CGCTGGTTTACCGTACCTATTGTACCCTCGTCAGTAAAACATCTTTCAAATTTTGGGACT GCAGCACTTGG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9M1W7 |
Definition |
sp|Q9M1W7|FBK78_ARATH F-box/Kelch-repeat protein At3g63220 OS=Arabidopsis thaliana |
Align length |
98 |
Score (bit) |
119.0 |
E-value |
2.0e-26 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9PAC1 |
Definition |
tr|A9PAC1|A9PAC1_POPTR Putative uncharacterized protein OS=Populus trichocarpa |
Align length |
99 |
Score (bit) |
113.0 |
E-value |
1.0e-23 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK957556|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0028_K23, 5' (611 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9PAC1|A9PAC1_POPTR Putative uncharacterized protein OS=Popul... 113 1e-23 tr|Q338Q9|Q338Q9_ORYSJ Os10g0388200 protein OS=Oryza sativa subs... 105 3e-21 tr|B8A742|B8A742_ORYSI Putative uncharacterized protein OS=Oryza... 105 3e-21 tr|A3C4B2|A3C4B2_ORYSJ Putative uncharacterized protein OS=Oryza... 105 3e-21 tr|A9SV66|A9SV66_PHYPA Predicted protein OS=Physcomitrella paten... 94 5e-18 tr|B6T7I5|B6T7I5_MAIZE Kelch-like protein 14 OS=Zea mays PE=2 SV=1 94 6e-18 tr|A9RUV9|A9RUV9_PHYPA Predicted protein OS=Physcomitrella paten... 89 3e-16 tr|A9S9R5|A9S9R5_PHYPA Predicted protein OS=Physcomitrella paten... 87 1e-15 tr|Q7XES2|Q7XES2_ORYSJ Os10g0409900 protein OS=Oryza sativa subs... 84 6e-15 tr|B8BGS5|B8BGS5_ORYSI Putative uncharacterized protein OS=Oryza... 84 6e-15 tr|A3C4N2|A3C4N2_ORYSJ Putative uncharacterized protein OS=Oryza... 84 6e-15 tr|A0SHK1|A0SHK1_ORYRU Kelch-motif containing protein (Fragment)... 84 6e-15 tr|A0SHJ8|A0SHJ8_ORYRU Kelch-motif containing protein (Fragment)... 84 6e-15 tr|A0SHJ6|A0SHJ6_ORYRU Kelch-motif containing protein (Fragment)... 84 6e-15 tr|A0SHJ5|A0SHJ5_ORYRU Kelch-motif containing protein (Fragment)... 84 6e-15 tr|A0SHJ4|A0SHJ4_ORYSI Kelch-motif containing protein (Fragment)... 84 6e-15 tr|A0SHJ3|A0SHJ3_ORYSI Kelch-motif containing protein (Fragment)... 84 6e-15 tr|A0SHJ1|A0SHJ1_ORYSI Kelch-motif containing protein (Fragment)... 84 6e-15 tr|A0SHJ0|A0SHJ0_ORYSJ Kelch-motif containing protein (Fragment)... 84 6e-15 tr|A0SHI9|A0SHI9_ORYSJ Kelch-motif containing protein (Fragment)... 84 6e-15 tr|A0SHI8|A0SHI8_ORYSJ Kelch-motif containing protein (Fragment)... 84 6e-15 tr|A0SHI7|A0SHI7_ORYSJ Kelch-motif containing protein (Fragment)... 84 6e-15 tr|A0SHI5|A0SHI5_ORYNI Kelch-motif containing protein (Fragment)... 84 6e-15 tr|A0SHI3|A0SHI3_9ORYZ Kelch-motif containing protein (Fragment)... 84 6e-15 tr|A0SHI1|A0SHI1_ORYLO Kelch-motif containing protein (Fragment)... 84 6e-15 tr|A0SHI0|A0SHI0_9ORYZ Kelch-motif containing protein (Fragment)... 84 6e-15 tr|A0SHH9|A0SHH9_9ORYZ Kelch-motif containing protein (Fragment)... 84 6e-15 tr|A0SHH8|A0SHH8_9ORYZ Kelch-motif containing protein (Fragment)... 84 6e-15 tr|A0SHH7|A0SHH7_9ORYZ Kelch-motif containing protein (Fragment)... 84 6e-15 tr|Q8S6N3|Q8S6N3_ORYSJ Os10g0363600 protein OS=Oryza sativa subs... 83 1e-14
>tr|A9PAC1|A9PAC1_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 345
Score = 113 bits (282), Expect = 1e-23 Identities = 48/99 (48%), Positives = 73/99 (73%) Frame = +1
Query: 310 MAALIDGLPDAVALQCLARVPLSSHPFMRAVNRAWRSHLCSEEFYKLRDETGSSEEWLYV 489 M+ LI+GLPDAVA++C+ARVP HP + V+R+WR+ + S E +K R E GS+E+ L V Sbjct: 1 MSELIEGLPDAVAIRCIARVPFYLHPKLELVSRSWRAVVRSPELFKARQEVGSAEDLLCV 60
Query: 490 SARDPDNVWQAFDPSCNRWFTVPIVPSSVKHLSNFGTAA 606 A DP+N+WQ +DP + W T+P++PS ++HL++FG + Sbjct: 61 CAFDPENLWQLYDPHRDLWITLPVLPSKIRHLAHFGVVS 99
>tr|Q338Q9|Q338Q9_ORYSJ Os10g0388200 protein OS=Oryza sativa subsp. japonica GN=Os10g0388200 PE=2 SV=1 Length = 347
Score = 105 bits (261), Expect = 3e-21 Identities = 44/100 (44%), Positives = 74/100 (74%) Frame = +1
Query: 310 MAALIDGLPDAVALQCLARVPLSSHPFMRAVNRAWRSHLCSEEFYKLRDETGSSEEWLYV 489 M+ LIDGLP+ VALQCLARVP SHP ++ V +WR+ + + E K+R++ ++E+ L V Sbjct: 2 MSTLIDGLPNEVALQCLARVPFLSHPVLQMVCHSWRASVRNGELSKVRNQISATEDLLCV 61
Query: 490 SARDPDNVWQAFDPSCNRWFTVPIVPSSVKHLSNFGTAAL 609 A +P+N+WQ +DP ++W T+P++PS +++++ FG A++ Sbjct: 62 LAFEPENMWQLYDPLRDKWITLPVMPSQIRNIARFGVASV 101
>tr|B8A742|B8A742_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_01663 PE=4 SV=1 Length = 346
Score = 105 bits (261), Expect = 3e-21 Identities = 44/100 (44%), Positives = 74/100 (74%) Frame = +1
Query: 310 MAALIDGLPDAVALQCLARVPLSSHPFMRAVNRAWRSHLCSEEFYKLRDETGSSEEWLYV 489 M+ LIDGLP+ VALQCLARVP SHP ++ V +WR+ + + E K+R++ ++E+ L V Sbjct: 1 MSTLIDGLPNEVALQCLARVPFLSHPVLQMVCHSWRASVRNGELSKVRNQISATEDLLCV 60
Query: 490 SARDPDNVWQAFDPSCNRWFTVPIVPSSVKHLSNFGTAAL 609 A +P+N+WQ +DP ++W T+P++PS +++++ FG A++ Sbjct: 61 LAFEPENMWQLYDPLRDKWITLPVMPSQIRNIARFGVASV 100
>tr|A3C4B2|A3C4B2_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_030134 PE=4 SV=1 Length = 376
Score = 105 bits (261), Expect = 3e-21 Identities = 44/100 (44%), Positives = 74/100 (74%) Frame = +1
Query: 310 MAALIDGLPDAVALQCLARVPLSSHPFMRAVNRAWRSHLCSEEFYKLRDETGSSEEWLYV 489 M+ LIDGLP+ VALQCLARVP SHP ++ V +WR+ + + E K+R++ ++E+ L V Sbjct: 1 MSTLIDGLPNEVALQCLARVPFLSHPVLQMVCHSWRASVRNGELSKVRNQISATEDLLCV 60
Query: 490 SARDPDNVWQAFDPSCNRWFTVPIVPSSVKHLSNFGTAAL 609 A +P+N+WQ +DP ++W T+P++PS +++++ FG A++ Sbjct: 61 LAFEPENMWQLYDPLRDKWITLPVMPSQIRNIARFGVASV 100
>tr|A9SV66|A9SV66_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_188742 PE=4 SV=1 Length = 352
Score = 94.4 bits (233), Expect = 5e-18 Identities = 40/96 (41%), Positives = 62/96 (64%) Frame = +1
Query: 310 MAALIDGLPDAVALQCLARVPLSSHPFMRAVNRAWRSHLCSEEFYKLRDETGSSEEWLYV 489 M+ LI+GLPD V LQCLAR+PLS + ++ V ++W + + S E R + EEWL+V Sbjct: 1 MSGLIEGLPDMVTLQCLARLPLSQYRSLQLVCKSWHAAVRSSELVHFRKALCTQEEWLFV 60
Query: 490 SARDPDNVWQAFDPSCNRWFTVPIVPSSVKHLSNFG 597 P VW+A+DP N+W +P++P+S+ +L +G Sbjct: 61 CGHTPKKVWEAYDPLANKWSLLPVLPTSIINLEGYG 96
>tr|B6T7I5|B6T7I5_MAIZE Kelch-like protein 14 OS=Zea mays PE=2 SV=1 Length = 342
Score = 94.0 bits (232), Expect = 6e-18 Identities = 37/86 (43%), Positives = 64/86 (74%) Frame = +1
Query: 352 QCLARVPLSSHPFMRAVNRAWRSHLCSEEFYKLRDETGSSEEWLYVSARDPDNVWQAFDP 531 +CLARVP HP ++ V R+WR+ +CS E K+R++ G++EE L V A +P+N+WQ +DP Sbjct: 10 KCLARVPFLFHPTLQLVCRSWRASVCSGELLKIRNQIGTTEELLCVLAFEPENMWQLYDP 69
Query: 532 SCNRWFTVPIVPSSVKHLSNFGTAAL 609 ++W T+P++PS +++++ FG A++ Sbjct: 70 LRDKWITLPVMPSQIRNIARFGVASV 95
>tr|A9RUV9|A9RUV9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_70860 PE=4 SV=1 Length = 431
Score = 88.6 bits (218), Expect = 3e-16 Identities = 44/104 (42%), Positives = 60/104 (57%), Gaps = 2/104 (1%) Frame = +1
Query: 304 ESMAALIDGLPDAVALQCLARVPLSSHPFMRAVNRAWRSHLCSEEFYKLRDETGSSEEWL 483 E LI LPD +AL CLARVP + H + AV R+WR L + FY +R E +EEWL Sbjct: 17 EPYRGLIPSLPDELALLCLARVPRAQHAVLSAVCRSWRRLLQTGVFYDIRQELSLTEEWL 76
Query: 484 YVSARDPD--NVWQAFDPSCNRWFTVPIVPSSVKHLSNFGTAAL 609 ++ +D NVW +DP NRWFT+P +P+ N +A + Sbjct: 77 FLWTQDSSRANVWHGYDPQSNRWFTLPPLPNEQCTAGNSASAVV 120
>tr|A9S9R5|A9S9R5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_163752 PE=4 SV=1 Length = 408
Score = 86.7 bits (213), Expect = 1e-15 Identities = 42/104 (40%), Positives = 58/104 (55%), Gaps = 2/104 (1%) Frame = +1
Query: 304 ESMAALIDGLPDAVALQCLARVPLSSHPFMRAVNRAWRSHLCSEEFYKLRDETGSSEEWL 483 E LI LPD +A CLARVP + H + AV R+WR L S Y +R E +EEWL Sbjct: 45 EPHQGLIPALPDELARLCLARVPRAQHALLSAVCRSWRLLLQSRVLYDIRQELSLAEEWL 104
Query: 484 YVSARDPD--NVWQAFDPSCNRWFTVPIVPSSVKHLSNFGTAAL 609 ++ +D NVW +DP NRWF +P +P+ + N +A + Sbjct: 105 FLWTQDMSRANVWHGYDPQSNRWFALPAIPNEQRTAGNSASAVV 148
>tr|Q7XES2|Q7XES2_ORYSJ Os10g0409900 protein OS=Oryza sativa subsp. japonica GN=Os10g0409900 PE=2 SV=1 Length = 442
Score = 84.0 bits (206), Expect = 6e-15 Identities = 42/103 (40%), Positives = 55/103 (53%), Gaps = 2/103 (1%) Frame = +1
Query: 307 SMAALIDGLPDAVALQCLARVPLSSHPFMRAVNRAWRSHLCSEEFYKLRDETGSSEEWLY 486 + A L+ GLPD +A+ CL RVP HP +R V + W L +Y LR G +EEW+Y Sbjct: 78 TQAPLLPGLPDDLAIACLIRVPRVEHPNLRIVCKRWNRLLSGNYYYSLRKRNGMAEEWVY 137
Query: 487 VSARDPDN--VWQAFDPSCNRWFTVPIVPSSVKHLSNFGTAAL 609 V RD + W AFDP W ++P VP+ FG A L Sbjct: 138 VFKRDREGKISWHAFDPLHQLWKSLPPVPAEYSEALGFGCAVL 180
>tr|B8BGS5|B8BGS5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_33535 PE=4 SV=1 Length = 441
Score = 84.0 bits (206), Expect = 6e-15 Identities = 42/103 (40%), Positives = 55/103 (53%), Gaps = 2/103 (1%) Frame = +1
Query: 307 SMAALIDGLPDAVALQCLARVPLSSHPFMRAVNRAWRSHLCSEEFYKLRDETGSSEEWLY 486 + A L+ GLPD +A+ CL RVP HP +R V + W L +Y LR G +EEW+Y Sbjct: 77 TQAPLLPGLPDDLAIACLIRVPRVEHPNLRIVCKRWNRLLSGNYYYSLRKRNGMAEEWVY 136
Query: 487 VSARDPDN--VWQAFDPSCNRWFTVPIVPSSVKHLSNFGTAAL 609 V RD + W AFDP W ++P VP+ FG A L Sbjct: 137 VFKRDREGKISWHAFDPLHQLWKSLPPVPAEYSEALGFGCAVL 179
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