| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK957560|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0028_L03, 5'
(642 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q0CR95|PABP_ASPTN Polyadenylate-binding protein, cytoplasmic ... 124 3e-28
sp|Q4WK03|PABP_ASPFU Polyadenylate-binding protein, cytoplasmic ... 124 3e-28
sp|A1D4K4|PABP_NEOFI Polyadenylate-binding protein, cytoplasmic ... 123 7e-28
sp|Q2UK72|PABP_ASPOR Polyadenylate-binding protein, cytoplasmic ... 123 7e-28
sp|A2Q848|PABP_ASPNC Polyadenylate-binding protein, cytoplasmic ... 122 2e-27
sp|A1CRM1|PABP_ASPCL Polyadenylate-binding protein, cytoplasmic ... 122 2e-27
sp|Q0U1G2|PABP_PHANO Polyadenylate-binding protein, cytoplasmic ... 120 6e-27
sp|Q1DXH0|PABP_COCIM Polyadenylate-binding protein, cytoplasmic ... 119 1e-26
sp|Q7S6N6|PABP_NEUCR Polyadenylate-binding protein, cytoplasmic ... 119 1e-26
sp|A4QUF0|PABP_MAGGR Polyadenylate-binding protein, cytoplasmic ... 119 1e-26
sp|Q2GSX8|PABP_CHAGB Polyadenylate-binding protein, cytoplasmic ... 119 1e-26
sp|Q5B630|PABP_EMENI Polyadenylate-binding protein, cytoplasmic ... 118 3e-26
sp|Q5KBW2|PABP_CRYNE Polyadenylate-binding protein, cytoplasmic ... 116 1e-25
sp|Q6FKG4|PABP_CANGA Polyadenylate-binding protein, cytoplasmic ... 116 1e-25
sp|P42731|PABP2_ARATH Polyadenylate-binding protein 2 OS=Arabido... 116 1e-25
sp|A5DM21|PABP_PICGU Polyadenylate-binding protein, cytoplasmic ... 113 7e-25
sp|A5DW14|PABP_LODEL Polyadenylate-binding protein, cytoplasmic ... 113 7e-25
sp|P31209|PABP_SCHPO Polyadenylate-binding protein, cytoplasmic ... 113 1e-24
sp|Q6IP09|PABPB_XENLA Polyadenylate-binding protein 1-B OS=Xenop... 112 1e-24
sp|Q9EPH8|PABP1_RAT Polyadenylate-binding protein 1 OS=Rattus no... 112 1e-24
sp|P29341|PABP1_MOUSE Polyadenylate-binding protein 1 OS=Mus mus... 112 1e-24
sp|P11940|PABP1_HUMAN Polyadenylate-binding protein 1 OS=Homo sa... 112 1e-24
sp|P61286|PABP1_BOVIN Polyadenylate-binding protein 1 OS=Bos tau... 112 1e-24
sp|P04147|PABP_YEAST Polyadenylate-binding protein, cytoplasmic ... 111 4e-24
sp|Q13310|PABP4_HUMAN Polyadenylate-binding protein 4 OS=Homo sa... 111 4e-24
sp|Q9H361|PABP3_HUMAN Polyadenylate-binding protein 3 OS=Homo sa... 111 4e-24
sp|Q5R8F7|PABP1_PONAB Polyadenylate-binding protein 1 OS=Pongo a... 111 4e-24
sp|Q5AI15|PABP_CANAL Polyadenylate-binding protein, cytoplasmic ... 110 5e-24
sp|Q5JQF8|PAP1M_HUMAN Polyadenylate-binding protein 1-like 2 OS=... 110 6e-24
sp|Q6BI95|PABP_DEBHA Polyadenylate-binding protein, cytoplasmic ... 110 8e-24
>sp|Q0CR95|PABP_ASPTN Polyadenylate-binding protein, cytoplasmic and
nuclear OS=Aspergillus terreus (strain NIH 2624) GN=pab1
PE=3 SV=1
Length = 753
Score = 124 bits (312), Expect = 3e-28
Identities = 60/93 (64%), Positives = 73/93 (78%)
Frame = +3
Query: 363 SPSQYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQ 542
S SQ S SLYVG+LDPSVTEA LYE+FS +GQV SI+VCRD ++++SLGYAYVNYNN
Sbjct: 41 STSQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTA 100
Query: 543 DASHALELLNFTFVNGKSIRIMHSHRDPSIRKS 641
D ALE LN+T + GK RIM S RDP++RK+
Sbjct: 101 DGERALEDLNYTLIKGKPCRIMWSQRDPALRKT 133
Score = 45.1 bits (105), Expect = 3e-04
Identities = 20/75 (26%), Positives = 44/75 (58%)
Frame = +3
Query: 387 SLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDASHALEL 566
++++ +LD ++ L++ F+ G ++S KV +D S GY +V+Y + A++A++
Sbjct: 137 NVFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETAEAANNAIKH 195
Query: 567 LNFTFVNGKSIRIMH 611
+N +N K + + H
Sbjct: 196 VNGMLLNDKKVFVGH 210
Score = 33.1 bits (74), Expect = 1.3
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +3
Query: 369 SQYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRD 488
S+Y +LYV +L + + +L E+F+ G + S KV RD
Sbjct: 327 SKYQGVNLYVKNLTDDIDDEKLREMFAPYGTITSAKVMRD 366
>sp|Q4WK03|PABP_ASPFU Polyadenylate-binding protein, cytoplasmic and
nuclear OS=Aspergillus fumigatus GN=pab1 PE=3 SV=1
Length = 753
Score = 124 bits (312), Expect = 3e-28
Identities = 60/93 (64%), Positives = 73/93 (78%)
Frame = +3
Query: 363 SPSQYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQ 542
S SQ S SLYVG+LDPSVTEA LYE+FS +GQV SI+VCRD ++++SLGYAYVNYNN
Sbjct: 45 SASQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTA 104
Query: 543 DASHALELLNFTFVNGKSIRIMHSHRDPSIRKS 641
D ALE LN+T + GK RIM S RDP++RK+
Sbjct: 105 DGERALEDLNYTLIKGKPCRIMWSQRDPALRKT 137
Score = 45.1 bits (105), Expect = 3e-04
Identities = 20/75 (26%), Positives = 44/75 (58%)
Frame = +3
Query: 387 SLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDASHALEL 566
++++ +LD ++ L++ F+ G ++S KV +D S GY +V+Y + A++A++
Sbjct: 141 NVFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETAEAANNAIKH 199
Query: 567 LNFTFVNGKSIRIMH 611
+N +N K + + H
Sbjct: 200 VNGMLLNDKKVFVGH 214
Score = 37.4 bits (85), Expect = 0.067
Identities = 32/137 (23%), Positives = 54/137 (39%), Gaps = 46/137 (33%)
Frame = +3
Query: 369 SQYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSK---------------- 500
S+Y +LYV +L V + +L E+FS G + S KV RD ++
Sbjct: 331 SKYQGVNLYVKNLTDDVDDEKLRELFSPFGTITSAKVMRDTVTTGETSESEKEKEKESNK 390
Query: 501 ------------------------------KSLGYAYVNYNNGQDASHALELLNFTFVNG 590
KS G+ +V +++ +AS A+ +N VNG
Sbjct: 391 ENEKEGEEKTEEKPKESEEEPKKTEKKILGKSKGFGFVCFSSPDEASKAVTEMNQRMVNG 450
Query: 591 KSIRIMHSHRDPSIRKS 641
K + + + R +R+S
Sbjct: 451 KPLYVALAQR-KDVRRS 466
>sp|A1D4K4|PABP_NEOFI Polyadenylate-binding protein, cytoplasmic and
nuclear OS=Neosartorya fischeri (strain ATCC 1020 / DSM
3700 / NRRL 181) GN=pab1 PE=3 SV=1
Length = 751
Score = 123 bits (309), Expect = 7e-28
Identities = 59/93 (63%), Positives = 73/93 (78%)
Frame = +3
Query: 363 SPSQYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQ 542
S +Q S SLYVG+LDPSVTEA LYE+FS +GQV SI+VCRD ++++SLGYAYVNYNN
Sbjct: 45 SANQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTA 104
Query: 543 DASHALELLNFTFVNGKSIRIMHSHRDPSIRKS 641
D ALE LN+T + GK RIM S RDP++RK+
Sbjct: 105 DGERALEDLNYTLIKGKPCRIMWSQRDPALRKT 137
Score = 45.1 bits (105), Expect = 3e-04
Identities = 20/75 (26%), Positives = 44/75 (58%)
Frame = +3
Query: 387 SLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDASHALEL 566
++++ +LD ++ L++ F+ G ++S KV +D S GY +V+Y + A++A++
Sbjct: 141 NVFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETAEAANNAIKH 199
Query: 567 LNFTFVNGKSIRIMH 611
+N +N K + + H
Sbjct: 200 VNGMLLNDKKVFVGH 214
Score = 38.1 bits (87), Expect = 0.039
Identities = 32/135 (23%), Positives = 54/135 (40%), Gaps = 44/135 (32%)
Frame = +3
Query: 369 SQYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSK---------------- 500
S+Y +LYV +L V + +L E+FS G + S KV RD ++
Sbjct: 331 SKYQGVNLYVKNLTDDVDDEKLRELFSPFGTITSAKVMRDTVTAGETSESEKEKESNKEN 390
Query: 501 ----------------------------KSLGYAYVNYNNGQDASHALELLNFTFVNGKS 596
KS G+ +V +++ +AS A+ +N VNGK
Sbjct: 391 EKEGEEKTEEKPKESEEEAKKTEKKILGKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKP 450
Query: 597 IRIMHSHRDPSIRKS 641
+ + + R +R+S
Sbjct: 451 LYVALAQR-KDVRRS 464
>sp|Q2UK72|PABP_ASPOR Polyadenylate-binding protein, cytoplasmic and
nuclear OS=Aspergillus oryzae GN=pab1 PE=3 SV=1
Length = 765
Score = 123 bits (309), Expect = 7e-28
Identities = 59/91 (64%), Positives = 72/91 (79%)
Frame = +3
Query: 369 SQYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDA 548
SQ S SLYVG+LDPSVTEA LYE+FS +GQV SI+VCRD ++++SLGYAYVNYNN D
Sbjct: 44 SQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADG 103
Query: 549 SHALELLNFTFVNGKSIRIMHSHRDPSIRKS 641
ALE LN+T + GK RIM S RDP++RK+
Sbjct: 104 ERALEDLNYTLIKGKPCRIMWSQRDPALRKT 134
Score = 45.4 bits (106), Expect = 2e-04
Identities = 20/63 (31%), Positives = 39/63 (61%)
Frame = +3
Query: 384 TSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDASHALE 563
T++Y+ ++D VTE + E+F + G++ S + RD KS G+ +VN++ + A A++
Sbjct: 230 TNVYIKNIDQDVTEEEFRELFEKFGEITSATLSRD-QEGKSRGFGFVNFSTHESAQAAVD 288
Query: 564 LLN 572
+N
Sbjct: 289 EMN 291
Score = 45.1 bits (105), Expect = 3e-04
Identities = 20/75 (26%), Positives = 44/75 (58%)
Frame = +3
Query: 387 SLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDASHALEL 566
++++ +LD ++ L++ F+ G ++S KV +D S GY +V+Y + A++A++
Sbjct: 138 NVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETAEAANNAIKH 196
Query: 567 LNFTFVNGKSIRIMH 611
+N +N K + + H
Sbjct: 197 VNGMLLNDKKVFVGH 211
Score = 33.5 bits (75), Expect = 0.96
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +3
Query: 369 SQYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRD 488
S+Y +LYV +L V + +L E+F G + S KV RD
Sbjct: 328 SKYQGVNLYVKNLTDDVDDEKLRELFGPYGTITSAKVMRD 367
>sp|A2Q848|PABP_ASPNC Polyadenylate-binding protein, cytoplasmic and
nuclear OS=Aspergillus niger (strain CBS 513.88 / FGSC
A1513) GN=pab1 PE=3 SV=1
Length = 731
Score = 122 bits (306), Expect = 2e-27
Identities = 57/87 (65%), Positives = 70/87 (80%)
Frame = +3
Query: 381 STSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDASHAL 560
S SLYVG+LDPSVTEA LYE+FS +GQV SI+VCRD ++++SLGYAYVNYNN D AL
Sbjct: 53 SASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERAL 112
Query: 561 ELLNFTFVNGKSIRIMHSHRDPSIRKS 641
E LN+T + GK RIM S RDP++RK+
Sbjct: 113 EDLNYTLIKGKPCRIMWSQRDPALRKT 139
Score = 45.1 bits (105), Expect = 3e-04
Identities = 20/75 (26%), Positives = 44/75 (58%)
Frame = +3
Query: 387 SLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDASHALEL 566
++++ +LD ++ L++ F+ G ++S KV +D S GY +V+Y + A++A++
Sbjct: 143 NVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETAEAANNAIKH 201
Query: 567 LNFTFVNGKSIRIMH 611
+N +N K + + H
Sbjct: 202 VNGMLLNDKKVFVGH 216
Score = 33.1 bits (74), Expect = 1.3
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +3
Query: 369 SQYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRD 488
S+Y +LYV +L + + +L E+F G + S KV RD
Sbjct: 333 SKYQGVNLYVKNLTDDIDDEKLRELFGPYGTITSAKVMRD 372
>sp|A1CRM1|PABP_ASPCL Polyadenylate-binding protein, cytoplasmic and
nuclear OS=Aspergillus clavatus GN=pab1 PE=3 SV=1
Length = 754
Score = 122 bits (306), Expect = 2e-27
Identities = 57/87 (65%), Positives = 70/87 (80%)
Frame = +3
Query: 381 STSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDASHAL 560
S SLYVG+LDPSVTEA LYE+FS +GQV SI+VCRD ++++SLGYAYVNYNN D AL
Sbjct: 50 SASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERAL 109
Query: 561 ELLNFTFVNGKSIRIMHSHRDPSIRKS 641
E LN+T + GK RIM S RDP++RK+
Sbjct: 110 EDLNYTLIKGKPCRIMWSQRDPALRKT 136
Score = 48.9 bits (115), Expect = 2e-05
Identities = 28/89 (31%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
Frame = +3
Query: 384 TSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDASHALE 563
T++Y+ ++DP VTE + +IF Q G++ S + RD KS G+ +VNY+ + A A++
Sbjct: 232 TNIYIKNIDPDVTEEEFRKIFEQFGEITSATLSRD-PEGKSRGFGFVNYSTHESAQAAVD 290
Query: 564 LLNFTFVNGKSI---RIMHSH-RDPSIRK 638
++ V + + R H R+ +RK
Sbjct: 291 EMHDKEVKTQKLYVGRAQKKHEREEELRK 319
Score = 45.1 bits (105), Expect = 3e-04
Identities = 20/75 (26%), Positives = 44/75 (58%)
Frame = +3
Query: 387 SLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDASHALEL 566
++++ +LD ++ L++ F+ G ++S KV +D S GY +V+Y + A++A++
Sbjct: 140 NVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETAEAANNAIKH 198
Query: 567 LNFTFVNGKSIRIMH 611
+N +N K + + H
Sbjct: 199 VNGMLLNDKKVFVGH 213
Score = 33.5 bits (75), Expect = 0.96
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +3
Query: 369 SQYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRD 488
S+Y +LYV +L V + +L E+F G + S KV RD
Sbjct: 330 SKYQGVNLYVKNLTDDVDDEKLRELFGPYGTITSAKVMRD 369
>sp|Q0U1G2|PABP_PHANO Polyadenylate-binding protein, cytoplasmic and
nuclear OS=Phaeosphaeria nodorum GN=PAB1 PE=3 SV=3
Length = 744
Score = 120 bits (301), Expect = 6e-27
Identities = 55/87 (63%), Positives = 71/87 (81%)
Frame = +3
Query: 381 STSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDASHAL 560
S SLYVG+LDPSVTEA L+E+FS +GQV SI+VCRD ++++SLGYAYVNYN+ +D AL
Sbjct: 47 SASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSSEDGEKAL 106
Query: 561 ELLNFTFVNGKSIRIMHSHRDPSIRKS 641
E LN+T + GK RIM S RDP++RK+
Sbjct: 107 EELNYTVIKGKPCRIMWSQRDPALRKT 133
Score = 45.1 bits (105), Expect = 3e-04
Identities = 20/75 (26%), Positives = 45/75 (60%)
Frame = +3
Query: 387 SLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDASHALEL 566
++++ +LD ++ L++ F+ G ++S KV +D + S GY +V+Y + A++A++
Sbjct: 137 NVFIKNLDHAIDNKALHDTFAAFGNILSCKVAQDELGN-SKGYGFVHYETAEAANNAIKH 195
Query: 567 LNFTFVNGKSIRIMH 611
+N +N K + + H
Sbjct: 196 VNGMLLNEKKVFVGH 210
Score = 44.3 bits (103), Expect = 5e-04
Identities = 28/89 (31%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Frame = +3
Query: 384 TSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDASHALE 563
T++YV ++D VT+ E+F + G + S + RD KS G+ +VNY + A+ A++
Sbjct: 229 TNIYVKNIDLDVTDEDFRELFEKHGDITSASIARDDQG-KSRGFGFVNYIRHEAAAVAVD 287
Query: 564 LLNFTFVNGKSI---RIMHSH-RDPSIRK 638
LN G+ + R H R+ +RK
Sbjct: 288 HLNDIEFKGQKLYVGRAQKKHEREEELRK 316
>sp|Q1DXH0|PABP_COCIM Polyadenylate-binding protein, cytoplasmic and
nuclear OS=Coccidioides immitis GN=PAB1 PE=3 SV=1
Length = 768
Score = 119 bits (299), Expect = 1e-26
Identities = 55/87 (63%), Positives = 70/87 (80%)
Frame = +3
Query: 381 STSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDASHAL 560
S SLYVG+LDPSVTEA L+E+FS +GQV SI+VCRD ++++SLGYAYVNYNN D AL
Sbjct: 54 SASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERAL 113
Query: 561 ELLNFTFVNGKSIRIMHSHRDPSIRKS 641
E LN+T + G+ RIM S RDP++RK+
Sbjct: 114 EDLNYTLIKGRPCRIMWSQRDPALRKT 140
Score = 44.7 bits (104), Expect = 4e-04
Identities = 20/75 (26%), Positives = 43/75 (57%)
Frame = +3
Query: 387 SLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDASHALEL 566
++++ +LD ++ L++ F+ G ++S KV +D S GY +V+Y + A +A++
Sbjct: 144 NVFIKNLDTAIDNKALHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETAEAAQNAIKH 202
Query: 567 LNFTFVNGKSIRIMH 611
+N +N K + + H
Sbjct: 203 VNGMLLNDKKVFVGH 217
Score = 35.0 bits (79), Expect = 0.33
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +3
Query: 369 SQYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRD 488
S+Y +LY+ +L + + +L E+FS G + S KV RD
Sbjct: 335 SKYQGVNLYIKNLSDDIDDEKLRELFSSYGTITSAKVMRD 374
>sp|Q7S6N6|PABP_NEUCR Polyadenylate-binding protein, cytoplasmic and
nuclear OS=Neurospora crassa GN=pab-1 PE=3 SV=1
Length = 764
Score = 119 bits (298), Expect = 1e-26
Identities = 55/93 (59%), Positives = 71/93 (76%)
Frame = +3
Query: 363 SPSQYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQ 542
+P S SLYVG+LDPSVTEA L+E+FSQ+G V SI+VCRD ++++SLGYAYVNYN
Sbjct: 53 APHPQASASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTA 112
Query: 543 DASHALELLNFTFVNGKSIRIMHSHRDPSIRKS 641
D ALE LN+T + G+ RIM S RDP++RK+
Sbjct: 113 DGEKALEELNYTLIKGRPCRIMWSQRDPALRKT 145
Score = 47.4 bits (111), Expect = 6e-05
Identities = 28/90 (31%), Positives = 51/90 (56%), Gaps = 4/90 (4%)
Frame = +3
Query: 384 TSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDASHALE 563
T++YV +++ VT+ + E+F++ G+V S + RD KS G+ +VN+ + A+ A++
Sbjct: 241 TNVYVKNINNEVTDEEFRELFAKFGEVTSSSLARD-QEGKSRGFGFVNFTTHEAAAQAVD 299
Query: 564 LLNFTFVNGKSI---RIMHSH-RDPSIRKS 641
LN G+ + R H R+ +RKS
Sbjct: 300 ELNGKDFRGQDLYVGRAQKKHEREEELRKS 329
Score = 45.1 bits (105), Expect = 3e-04
Identities = 21/75 (28%), Positives = 43/75 (57%)
Frame = +3
Query: 387 SLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDASHALEL 566
++++ +LD ++ L++ F+ G ++S KV +D S GY +V+Y + AS A++
Sbjct: 149 NIFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEHGN-SKGYGFVHYETDEAASQAIKH 207
Query: 567 LNFTFVNGKSIRIMH 611
+N +N K + + H
Sbjct: 208 VNGMLLNEKKVYVGH 222
Score = 37.4 bits (85), Expect = 0.067
Identities = 30/131 (22%), Positives = 54/131 (41%), Gaps = 40/131 (30%)
Frame = +3
Query: 369 SQYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSK---------------- 500
++Y +LY+ +L V + +L +FS+ G + S KV RD + +
Sbjct: 339 NKYQGVNLYIKNLGDDVDDDKLRAMFSEYGPITSAKVMRDSLIEGSEEKDEKDKENKKEG 398
Query: 501 ------------------------KSLGYAYVNYNNGQDASHALELLNFTFVNGKSIRIM 608
KS G+ +V ++N DA+ A+ +N V+GK + +
Sbjct: 399 ETKEEEQNEGSEKKTEKKGDRKLGKSKGFGFVCFSNPDDATKAVTEMNQRMVDGKPLYVA 458
Query: 609 HSHRDPSIRKS 641
+ R +RKS
Sbjct: 459 LAQR-KDVRKS 468
>sp|A4QUF0|PABP_MAGGR Polyadenylate-binding protein, cytoplasmic and
nuclear OS=Magnaporthe grisea GN=PAB1 PE=3 SV=1
Length = 762
Score = 119 bits (298), Expect = 1e-26
Identities = 55/93 (59%), Positives = 71/93 (76%)
Frame = +3
Query: 363 SPSQYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQ 542
+P S SLYVG+LDPSVTEA L+E+FSQ+G V SI+VCRD ++++SLGYAYVNYN
Sbjct: 54 APHPQASASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTA 113
Query: 543 DASHALELLNFTFVNGKSIRIMHSHRDPSIRKS 641
D ALE LN+T + G+ RIM S RDP++RK+
Sbjct: 114 DGEKALEELNYTLIKGRPCRIMWSQRDPALRKT 146
Score = 55.8 bits (133), Expect = 2e-07
Identities = 30/90 (33%), Positives = 54/90 (60%), Gaps = 4/90 (4%)
Frame = +3
Query: 384 TSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDASHALE 563
T++YV +++P VT+ + +F + G V S + RD + KS G+ +VN+ + +DAS A++
Sbjct: 242 TNIYVKNINPEVTDDEFRTLFEKYGDVTSSSLARDQETGKSRGFGFVNFTSHEDASKAVQ 301
Query: 564 LLNFTFVNGKSI---RIMHSH-RDPSIRKS 641
LN +G+++ R H R+ +RKS
Sbjct: 302 ELNEKEFHGQNLYVGRAQKKHEREEELRKS 331
Score = 45.1 bits (105), Expect = 3e-04
Identities = 21/75 (28%), Positives = 44/75 (58%)
Frame = +3
Query: 387 SLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDASHALEL 566
++++ +LD ++ L++ F+ G ++S KV +D + S GY +V+Y + AS A++
Sbjct: 150 NVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQD-ENGNSKGYGFVHYETDEAASQAIKH 208
Query: 567 LNFTFVNGKSIRIMH 611
+N +N K + + H
Sbjct: 209 VNGMLLNEKKVYVGH 223
Score = 38.9 bits (89), Expect = 0.023
Identities = 31/137 (22%), Positives = 55/137 (40%), Gaps = 46/137 (33%)
Frame = +3
Query: 369 SQYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSK---------------- 500
S+Y +LY+ +LD V + +L ++FS+ G + S KV RD +++
Sbjct: 341 SKYQGVNLYIKNLDDEVDDEKLRQLFSEFGPITSAKVMRDSITEPGEEGESKEGEESEKN 400
Query: 501 ------------------------------KSLGYAYVNYNNGQDASHALELLNFTFVNG 590
KS G+ +V + N DA+ A+ +N VN
Sbjct: 401 KENKPEEKEGDDSKPEEKEGEDSKSKSKLGKSKGFGFVCFANPDDATKAVAEMNQRMVNN 460
Query: 591 KSIRIMHSHRDPSIRKS 641
K + + + R +RK+
Sbjct: 461 KPLYVALAQR-KDVRKN 476
|
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK957560|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0028_L03, 5'
(642 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|A9S663|A9S663_PHYPA Predicted protein OS=Physcomitrella paten... 155 3e-36
tr|A9SVZ7|A9SVZ7_PHYPA Predicted protein OS=Physcomitrella paten... 150 8e-35
tr|A9TLC5|A9TLC5_PHYPA Predicted protein OS=Physcomitrella paten... 149 1e-34
tr|Q39953|Q39953_ANEPH Poly(A)-mRNA binding protein OS=Anemia ph... 147 4e-34
tr|A9TPK9|A9TPK9_PHYPA Predicted protein OS=Physcomitrella paten... 144 6e-33
tr|Q9M549|Q9M549_CUCSA Poly(A)-binding protein OS=Cucumis sativu... 137 4e-31
tr|A5BR81|A5BR81_VITVI Putative uncharacterized protein (Chromos... 133 1e-29
tr|B7FM14|B7FM14_MEDTR Putative uncharacterized protein (Fragmen... 130 5e-29
tr|A7PLE6|A7PLE6_VITVI Chromosome chr7 scaffold_20, whole genome... 130 7e-29
tr|P93616|P93616_WHEAT Poly(A)-binding protein OS=Triticum aesti... 129 1e-28
tr|A5B5N0|A5B5N0_VITVI Putative uncharacterized protein (Chromos... 129 2e-28
tr|Q9M6E6|Q9M6E6_TOBAC Poly(A)-binding protein OS=Nicotiana taba... 128 3e-28
tr|A5C1F3|A5C1F3_VITVI Putative uncharacterized protein OS=Vitis... 127 6e-28
tr|Q9AT32|Q9AT32_DAUCA Poly(A)-binding protein OS=Daucus carota ... 125 2e-27
tr|Q6YYV1|Q6YYV1_ORYSJ Os09g0115400 protein OS=Oryza sativa subs... 125 2e-27
tr|A2YYH2|A2YYH2_ORYSI Putative uncharacterized protein OS=Oryza... 125 2e-27
tr|Q7X675|Q7X675_ORYSA OSJNBa0014K14.19 protein OS=Oryza sativa ... 125 3e-27
tr|Q7F8Y1|Q7F8Y1_ORYSJ Os04g0504800 protein OS=Oryza sativa subs... 125 3e-27
tr|B8ARD0|B8ARD0_ORYSI Putative uncharacterized protein OS=Oryza... 125 3e-27
tr|B0XND2|B0XND2_ASPFC Polyadenylate-binding protein OS=Aspergil... 124 4e-27
tr|B8N3I8|B8N3I8_ASPFL Polyadenylate-binding protein OS=Aspergil... 123 8e-27
tr|Q014N8|Q014N8_OSTTA Polyadenylate-binding protein, putative /... 123 1e-26
tr|Q6Z050|Q6Z050_ORYSJ Os08g0314800 protein OS=Oryza sativa subs... 122 1e-26
tr|Q6UUN6|Q6UUN6_ORYSJ Putative poly(A)-binding protein (Putativ... 122 1e-26
tr|B6U4M0|B6U4M0_MAIZE Polyadenylate-binding protein 2 OS=Zea ma... 122 1e-26
tr|A2YTU1|A2YTU1_ORYSI Putative uncharacterized protein OS=Oryza... 122 1e-26
tr|B8MGJ6|B8MGJ6_9EURO Polyadenylate-binding protein OS=Talaromy... 122 1e-26
tr|B6QKP6|B6QKP6_PENMA Polyadenylate-binding protein OS=Penicill... 122 1e-26
tr|A4S0L2|A4S0L2_OSTLU Predicted protein OS=Ostreococcus lucimar... 122 2e-26
tr|B6H844|B6H844_PENCH Pc16g09030 protein OS=Penicillium chrysog... 122 2e-26
>tr|A9S663|A9S663_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_124737 PE=4 SV=1
Length = 439
Score = 155 bits (391), Expect = 3e-36
Identities = 74/93 (79%), Positives = 88/93 (94%)
Frame = +3
Query: 363 SPSQYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQ 542
+P+Q+VSTSLYVGDL+P+V+EAQLYE+FSQVGQVVSI+VCRDL++++SLGY+YVNYNN Q
Sbjct: 17 APTQFVSTSLYVGDLEPNVSEAQLYEMFSQVGQVVSIRVCRDLITRRSLGYSYVNYNNAQ 76
Query: 543 DASHALELLNFTFVNGKSIRIMHSHRDPSIRKS 641
DA+ ALELLNFT VNGK IRIM SHRDPSIRKS
Sbjct: 77 DATRALELLNFTGVNGKPIRIMFSHRDPSIRKS 109
Score = 44.3 bits (103), Expect = 0.006
Identities = 23/83 (27%), Positives = 47/83 (56%)
Frame = +3
Query: 372 QYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDAS 551
+Y +LY+ +LD +V + ++ E+F++ G + S KV RD +S G +V +++ +A+
Sbjct: 302 KYQGVNLYLKNLDDTVDDEKIRELFAEYGTITSCKVMRDHQG-QSKGSGFVAFSSPDEAT 360
Query: 552 HALELLNFTFVNGKSIRIMHSHR 620
A+ +N V K + + + R
Sbjct: 361 RAVTEMNGKMVGNKPLYVALAQR 383
>tr|A9SVZ7|A9SVZ7_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_216291 PE=4 SV=1
Length = 645
Score = 150 bits (378), Expect = 8e-35
Identities = 73/93 (78%), Positives = 84/93 (90%)
Frame = +3
Query: 363 SPSQYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQ 542
+P +VSTSLYVGDL+ +V+EAQLYEIFSQVGQVVSI+VCRDL++++SLGYAYVNYNN Q
Sbjct: 17 APPNFVSTSLYVGDLESTVSEAQLYEIFSQVGQVVSIRVCRDLITRRSLGYAYVNYNNAQ 76
Query: 543 DASHALELLNFTFVNGKSIRIMHSHRDPSIRKS 641
DA+ ALELLNF VNGK IRIM SHRDPSIRKS
Sbjct: 77 DATRALELLNFNAVNGKPIRIMFSHRDPSIRKS 109
Score = 48.1 bits (113), Expect = 4e-04
Identities = 26/83 (31%), Positives = 48/83 (57%)
Frame = +3
Query: 372 QYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDAS 551
+Y +LY+ +LD ++ + +L EIFS+ G +VS KV RD +S G +V +++ +A+
Sbjct: 302 KYQGVNLYLKNLDDTIDDEKLREIFSEYGTIVSCKVMRDPQG-QSRGSGFVAFSSPDEAT 360
Query: 552 HALELLNFTFVNGKSIRIMHSHR 620
A+ +N V K + + + R
Sbjct: 361 RAVTEMNGKMVGSKPLYVALAQR 383
>tr|A9TLC5|A9TLC5_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_170712 PE=4 SV=1
Length = 650
Score = 149 bits (376), Expect = 1e-34
Identities = 70/92 (76%), Positives = 86/92 (93%)
Frame = +3
Query: 366 PSQYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQD 545
P+Q+VSTSLYVGDL+P+V+EAQLYE+F+QVGQVVSI+VCRDL++++SLGYAYVNYN+ QD
Sbjct: 22 PAQFVSTSLYVGDLEPNVSEAQLYELFTQVGQVVSIRVCRDLITRRSLGYAYVNYNSAQD 81
Query: 546 ASHALELLNFTFVNGKSIRIMHSHRDPSIRKS 641
A+ ALELLNF+ +NG IRIM SHRDPSIRKS
Sbjct: 82 ATRALELLNFSVLNGNPIRIMFSHRDPSIRKS 113
Score = 45.1 bits (105), Expect = 0.004
Identities = 24/83 (28%), Positives = 47/83 (56%)
Frame = +3
Query: 372 QYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDAS 551
+Y +LY+ +LD +V + +L E+F+ G + S KV RD +S G +V +++ ++A+
Sbjct: 306 KYQGVNLYLKNLDDTVDDEKLRELFADYGTITSCKVMRDPQG-QSRGSGFVAFSSPEEAT 364
Query: 552 HALELLNFTFVNGKSIRIMHSHR 620
A+ +N V K + + + R
Sbjct: 365 RAVTEMNGKMVGSKPLYVALAQR 387
>tr|Q39953|Q39953_ANEPH Poly(A)-mRNA binding protein OS=Anemia
phyllitidis PE=2 SV=1
Length = 638
Score = 147 bits (372), Expect = 4e-34
Identities = 71/91 (78%), Positives = 81/91 (89%)
Frame = +3
Query: 369 SQYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDA 548
S YV+ SLYVGDLDP V+E++LYE+F+Q+GQVVSI+VCRDLM+KKSLGYAYVNY QDA
Sbjct: 21 SPYVAPSLYVGDLDPDVSESELYEVFNQIGQVVSIRVCRDLMTKKSLGYAYVNYGTHQDA 80
Query: 549 SHALELLNFTFVNGKSIRIMHSHRDPSIRKS 641
S ALELLNFT V GK IRIM+SHRDPSIRKS
Sbjct: 81 SQALELLNFTLVKGKPIRIMYSHRDPSIRKS 111
Score = 40.0 bits (92), Expect = 0.12
Identities = 21/83 (25%), Positives = 45/83 (54%)
Frame = +3
Query: 372 QYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDAS 551
++ +LY+ ++D S+ + +L E+F+ G V S KV + +S+G +V ++ ++A
Sbjct: 303 KFQGVNLYLKNIDDSIDDEKLRELFAVFGTVTSCKVMKSPQG-QSMGSGFVTFSAPEEAM 361
Query: 552 HALELLNFTFVNGKSIRIMHSHR 620
A+ +N V K + + + R
Sbjct: 362 QAVNDMNGKMVGSKPLYVALAQR 384
>tr|A9TPK9|A9TPK9_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_108547 PE=4 SV=1
Length = 647
Score = 144 bits (362), Expect = 6e-33
Identities = 69/93 (74%), Positives = 85/93 (91%)
Frame = +3
Query: 363 SPSQYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQ 542
+P+Q+VSTS+YVGDL+ +V+EAQLYEIFSQ G VVSI+VCRDL++++SLGYAYVNY++ Q
Sbjct: 17 APNQFVSTSVYVGDLEHNVSEAQLYEIFSQTGPVVSIRVCRDLITRRSLGYAYVNYHSAQ 76
Query: 543 DASHALELLNFTFVNGKSIRIMHSHRDPSIRKS 641
DA+ ALELLNFT VNGK IRIM SHRDPS+RKS
Sbjct: 77 DATRALELLNFTPVNGKPIRIMFSHRDPSLRKS 109
Score = 44.7 bits (104), Expect = 0.005
Identities = 23/83 (27%), Positives = 47/83 (56%)
Frame = +3
Query: 372 QYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDAS 551
+Y +LY+ +LD +V + +L E+F++ G + S KV +D +S G +V ++ ++A+
Sbjct: 302 KYQGVNLYLKNLDDAVDDEKLRELFAEYGTITSCKVMKDPQG-QSRGSGFVAFSTPEEAT 360
Query: 552 HALELLNFTFVNGKSIRIMHSHR 620
A+ +N V K + + + R
Sbjct: 361 RAVTEMNTKMVGSKPLYVALAQR 383
>tr|Q9M549|Q9M549_CUCSA Poly(A)-binding protein OS=Cucumis sativus
PE=2 SV=1
Length = 649
Score = 137 bits (346), Expect = 4e-31
Identities = 63/94 (67%), Positives = 83/94 (88%)
Frame = +3
Query: 360 GSPSQYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNG 539
G +Q+V+TSLYVGDLD +VT++QLY++F+QVGQVVS++VCRDL S++SLGY YVNY+N
Sbjct: 21 GGANQHVTTSLYVGDLDVNVTDSQLYDLFNQVGQVVSVRVCRDLTSRRSLGYGYVNYSNP 80
Query: 540 QDASHALELLNFTFVNGKSIRIMHSHRDPSIRKS 641
DAS AL++LNFT +NG IR+M+SHRDPS+RKS
Sbjct: 81 VDASRALDVLNFTPLNGNPIRVMYSHRDPSVRKS 114
Score = 43.9 bits (102), Expect = 0.008
Identities = 25/83 (30%), Positives = 47/83 (56%)
Frame = +3
Query: 372 QYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDAS 551
+Y +LYV +LD S+ + +L E+F+ G + S KV RD + S G +V +++ ++A+
Sbjct: 307 KYQGANLYVKNLDDSIDDDKLKELFTGFGTITSCKVMRD-PNGISRGSGFVAFSSPEEAA 365
Query: 552 HALELLNFTFVNGKSIRIMHSHR 620
AL +N + K + + + R
Sbjct: 366 RALAEMNGRMIVSKPLYVALAQR 388
Score = 43.1 bits (100), Expect = 0.014
Identities = 23/69 (33%), Positives = 40/69 (57%)
Frame = +3
Query: 387 SLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDASHALEL 566
+++V +L + +E L +F + G + S+ V RD KS + +VN+ N DA+ ++E
Sbjct: 209 NVFVKNLAETTSEEDLKNMFGEFGPITSVVVMRD-GEGKSKCFGFVNFENADDAARSVEA 267
Query: 567 LNFTFVNGK 593
LN V+GK
Sbjct: 268 LNGKKVDGK 276
>tr|A5BR81|A5BR81_VITVI Putative uncharacterized protein (Chromosome
chr3 scaffold_8, whole genome shotgun sequence) OS=Vitis
vinifera GN=GSVIVT00036627001 PE=4 SV=1
Length = 648
Score = 133 bits (334), Expect = 1e-29
Identities = 61/91 (67%), Positives = 82/91 (90%)
Frame = +3
Query: 369 SQYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDA 548
+Q+V+TSLYVGDL+ +V ++QLY++FSQ+G VVS++VCRDL +++SLGY YVNY+N QDA
Sbjct: 25 NQFVTTSLYVGDLELNVNDSQLYDLFSQMGAVVSVRVCRDLSTRRSLGYGYVNYSNPQDA 84
Query: 549 SHALELLNFTFVNGKSIRIMHSHRDPSIRKS 641
+ AL++LNFT +NGK IRIM+SHRDPSIRKS
Sbjct: 85 ARALDVLNFTPLNGKPIRIMYSHRDPSIRKS 115
Score = 46.6 bits (109), Expect = 0.001
Identities = 26/83 (31%), Positives = 48/83 (57%)
Frame = +3
Query: 372 QYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDAS 551
++ +LY+ +LD S+ + +L E+F+Q G + S KV RD + S G +V +++ ++AS
Sbjct: 308 KFQGANLYIKNLDDSIGDDKLKELFAQFGTITSCKVMRD-PNGLSRGSGFVAFSSPEEAS 366
Query: 552 HALELLNFTFVNGKSIRIMHSHR 620
AL +N V K + + + R
Sbjct: 367 RALAEMNSKMVVSKPLYVALAQR 389
>tr|B7FM14|B7FM14_MEDTR Putative uncharacterized protein (Fragment)
OS=Medicago truncatula PE=2 SV=1
Length = 494
Score = 130 bits (328), Expect = 5e-29
Identities = 58/92 (63%), Positives = 80/92 (86%)
Frame = +3
Query: 366 PSQYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQD 545
P+Q +TSLYVGDLD VT++QLY++F+Q+GQVVS+++CRDL S++SLGY YVN++N D
Sbjct: 18 PNQLTTTSLYVGDLDHDVTDSQLYDLFNQIGQVVSVRICRDLASQQSLGYGYVNFSNPHD 77
Query: 546 ASHALELLNFTFVNGKSIRIMHSHRDPSIRKS 641
A+ A+++LNFT +N K IRIM+SHRDPS+RKS
Sbjct: 78 AAKAMDVLNFTPLNNKPIRIMYSHRDPSVRKS 109
Score = 49.3 bits (116), Expect = 2e-04
Identities = 27/78 (34%), Positives = 46/78 (58%)
Frame = +3
Query: 372 QYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDAS 551
++ +LY+ +LD SVT+ +L E+FS+ G V S K+ RD S G +V ++ ++A+
Sbjct: 302 KFYGANLYLKNLDDSVTDEKLSELFSEFGTVTSCKILRDPQG-ISRGSGFVAFSTPEEAT 360
Query: 552 HALELLNFTFVNGKSIRI 605
AL +N V GK + +
Sbjct: 361 RALAEMNGKMVAGKPLYV 378
Score = 42.0 bits (97), Expect = 0.032
Identities = 23/62 (37%), Positives = 35/62 (56%)
Frame = +3
Query: 387 SLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDASHALEL 566
++YV +L SVT+ L F + G + S V RD + KS + +VN+ N A+ A+E
Sbjct: 204 NVYVKNLSESVTDDDLKNTFGEYGTITSAVVMRD-VDGKSKCFGFVNFENADAAAEAVEA 262
Query: 567 LN 572
LN
Sbjct: 263 LN 264
>tr|A7PLE6|A7PLE6_VITVI Chromosome chr7 scaffold_20, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00019539001
PE=4 SV=1
Length = 654
Score = 130 bits (327), Expect = 7e-29
Identities = 60/94 (63%), Positives = 80/94 (85%)
Frame = +3
Query: 360 GSPSQYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNG 539
G +Q+VSTSLYVGDL+ +VT++ LY++F Q+G VVS++VCRDL +++SLGY YVNY N
Sbjct: 24 GGGNQFVSTSLYVGDLESNVTDSHLYDLFGQLGPVVSVRVCRDLSTRRSLGYGYVNYGNT 83
Query: 540 QDASHALELLNFTFVNGKSIRIMHSHRDPSIRKS 641
QDA+ AL++LNFT +NGK IRIM+S RDPSIR+S
Sbjct: 84 QDAARALDMLNFTPLNGKPIRIMYSFRDPSIRRS 117
Score = 47.0 bits (110), Expect = 0.001
Identities = 27/83 (32%), Positives = 47/83 (56%)
Frame = +3
Query: 372 QYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDAS 551
++ +LYV +LD S+ + +L E+FS+ G + S KV RD + S G +V ++ ++AS
Sbjct: 310 KFQGLNLYVKNLDDSIADDKLRELFSEFGTITSCKVMRD-PNGISRGSGFVAFSTAEEAS 368
Query: 552 HALELLNFTFVNGKSIRIMHSHR 620
AL +N V K + + + R
Sbjct: 369 RALADMNGKMVASKPLYVALAQR 391
>tr|P93616|P93616_WHEAT Poly(A)-binding protein OS=Triticum aestivum
GN=wheatpab PE=1 SV=1
Length = 651
Score = 129 bits (325), Expect = 1e-28
Identities = 60/91 (65%), Positives = 79/91 (86%)
Frame = +3
Query: 369 SQYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDA 548
S + +TSLYVGDLD SV +AQL+++F+Q+G VVS++VCRD+ S+KSLGYAYVNYN DA
Sbjct: 27 SSFPATSLYVGDLDVSVQDAQLFDVFAQIGGVVSVRVCRDVTSRKSLGYAYVNYNTPADA 86
Query: 549 SHALELLNFTFVNGKSIRIMHSHRDPSIRKS 641
+ ALE+LNFT +NG+ IRIM+S+RDPS+RKS
Sbjct: 87 ARALEMLNFTPINGRPIRIMYSNRDPSLRKS 117
Score = 51.2 bits (121), Expect = 5e-05
Identities = 28/83 (33%), Positives = 48/83 (57%)
Frame = +3
Query: 372 QYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDAS 551
+Y +T+LY+ +LD +V + +L E+F++ G + S KV RD + S G +V + + DAS
Sbjct: 310 KYQNTNLYLKNLDDTVDDEKLRELFAEFGTITSCKVMRD-SNGASRGSGFVAFKSADDAS 368
Query: 552 HALELLNFTFVNGKSIRIMHSHR 620
AL +N V K + + + R
Sbjct: 369 RALAEMNNKMVGNKPLYVALAQR 391
Score = 39.7 bits (91), Expect = 0.16
Identities = 23/70 (32%), Positives = 39/70 (55%)
Frame = +3
Query: 363 SPSQYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQ 542
SP ++YV +L + TE L EIF + G + S+ V RD +S + +VN+ +
Sbjct: 204 SPGNVKFNNVYVKNLAETTTEDDLKEIFGKFGAITSVVVMRD-GDGRSKCFGFVNFESPD 262
Query: 543 DASHALELLN 572
+A+ A++ LN
Sbjct: 263 EAALAVQDLN 272
|