DK957569
Clone id TST39A01NGRL0028_L12
Library
Length 774
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0028_L12. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
GACTATTCTGGCCTTAGAGTATGGAGATGCTAAGAGTTTTCTTGCAGACTTTATTGGACG
CAGCAAAAAGCTCTGCGGTGCAATGACACGGATCCGTGATCGTTTCAGTGTAGCAGAGGT
CTTGATTCAGGTGTTTTTGCGGGTCATTCCAGGAAAGGCGAACAACAAGTTGGTGCTTCT
GTCGAATTCTCAGCGATTGGCTCTTTTAGCTGCATGGGCACCCATGGTTGCGGACCTCAA
GTGTGAGTCCCTTGAGTCTGCATTCAGGCAGCTATTCACCACGTTACCATTGCAAGACCC
TGTGCTCATAGCGCTTGTCAAAGAAGAGACTACCAACCCCCACTTTGGAGATTGCTATGC
ATGGTGGCGCACAAAGTTATTTGAGCGAATGAAGCGCTGTAACAGTGCTCGTGAGGAGAT
TGATTTGGAGGCATCCAACTCTTCCAAGGAGCGGGTCAAGCTCGTGAGTGGAGAGGAATC
ATGAAAACAGATGAGGTAAGTCCCAAGTGCTTTACTTATGTGATTAGATATGAGGCCTGT
GGGCTGTGGTTCAGCCAGCCATCAACAGTCAAAAGTGGAGTGGATTGTGAATCTGCATGT
CAAGCACTTGTACTTTTACCAGTCAATCCTCTTGGTTTATGTTATTGTACATTGAAAAAA
CTTAGTCCATAGAAAAACATACCAATGTTTTTTGGCCAAGCAAAGGTGGAACCCTGGCTT
AAGTGGATGGGCCTTCAAAAACCTTTTTTTTTGGTTTGAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id P47799
Definition sp|P47799|FSHR_HORSE Follicle-stimulating hormone receptor OS=Equus caballus
Align length 60
Score (bit) 31.6
E-value 4.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK957569|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0028_L12, 5'
(758 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P47799|FSHR_HORSE Follicle-stimulating hormone receptor OS=Eq... 32 4.9
sp|Q95179|FSHR_EQUAS Follicle-stimulating hormone receptor OS=Eq... 32 4.9
sp|Q1LVZ2|MARH2_DANRE E3 ubiquitin-protein ligase MARCH2 OS=Dani... 31 6.5
sp|Q7T2L7|I17RD_CHICK Interleukin-17 receptor D OS=Gallus gallus... 31 6.5
sp|P35319|ARACL_STRLI Putative araC-like transcription regulator... 31 6.5
sp|Q03320|ARACL_STRAT Putative araC-like transcription regulator... 31 6.5
sp|Q86I32|Y7617_DICDI Uncharacterized protein DDB_G0275275 OS=Di... 31 8.4

>sp|P47799|FSHR_HORSE Follicle-stimulating hormone receptor OS=Equus
caballus GN=FSHR PE=2 SV=1
Length = 694

Score = 31.6 bits (70), Expect = 4.9
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +2

Query: 308 IALVKEETTNPHFGDCYAWWRTKLFERMKRCNSA--REEIDLEASNSSKERVKLVSGEES 481
+AL++ T P +A WR + E CN + R+E+D+ + ERV L +ES
Sbjct: 262 VALMEANLTYPSHCCAFANWRRQTSELQTTCNKSILRQEVDMTQARG--ERVSLAEDDES 319


>sp|Q95179|FSHR_EQUAS Follicle-stimulating hormone receptor OS=Equus
asinus GN=FSHR PE=2 SV=1
Length = 687

Score = 31.6 bits (70), Expect = 4.9
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +2

Query: 308 IALVKEETTNPHFGDCYAWWRTKLFERMKRCNSA--REEIDLEASNSSKERVKLVSGEES 481
+AL++ T P +A WR + E CN + R+E+D+ + ERV L +ES
Sbjct: 262 VALMEASLTYPSHCCAFANWRQQTSELQTTCNKSILRQEVDMTQARG--ERVSLAEDDES 319


>sp|Q1LVZ2|MARH2_DANRE E3 ubiquitin-protein ligase MARCH2 OS=Danio
rerio GN=march2 PE=2 SV=1
Length = 249

Score = 31.2 bits (69), Expect = 6.5
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -2

Query: 133 HLNQDLCYTETITDPCHCTAELFAASNKVCKKTLSIS 23
H QD+C +E + PC CT L +K LS S
Sbjct: 68 HEGQDVCNSEGLLSPCDCTGTLGTVHKSCLEKWLSSS 104


>sp|Q7T2L7|I17RD_CHICK Interleukin-17 receptor D OS=Gallus gallus
GN=IL17RD PE=2 SV=1
Length = 741

Score = 31.2 bits (69), Expect = 6.5
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = -2

Query: 190 RIRQKHQLVVRLSWNDPQKHLNQDLCYTETITDPCHCTAELFAASN-KVCKKT 35
R+R + ++ + S D QKH+N C+ + D C C L + K+CK++
Sbjct: 353 RLRPRPKVFICYSSKDCQKHINVIQCFAYFLQDFCGCEVALDLWEDLKICKES 405


>sp|P35319|ARACL_STRLI Putative araC-like transcription regulator
OS=Streptomyces lividans PE=4 SV=1
Length = 304

Score = 31.2 bits (69), Expect = 6.5
Identities = 18/56 (32%), Positives = 26/56 (46%)
Frame = -1

Query: 599 HADSQSTPLLTVDGWLNHSPQASYLIT*VKHLGLTSSVFMIPLHSRA*PAPWKSWM 432
HA++ L +D L H P AS LI +HL + V ++ LH P W+
Sbjct: 140 HAETVQWALTAIDQELTHRPMASTLI--AEHLAVIMLVHVLRLHLERAPHAVSGWL 193


>sp|Q03320|ARACL_STRAT Putative araC-like transcription regulator
OS=Streptomyces antibioticus PE=4 SV=1
Length = 303

Score = 31.2 bits (69), Expect = 6.5
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = -1

Query: 599 HADSQSTPLLTVDGWLNHSPQASYLIT*VKHLGLTSSVFMIPLHSRA*PAPWKSWM 432
HA++ L +D L H P AS L+ +HL + + ++ LH P W+
Sbjct: 140 HAEAVQWALTAIDQELTHQPMASTLV--AEHLAVVMLIHVLRLHLERAPDAVSGWL 193


>sp|Q86I32|Y7617_DICDI Uncharacterized protein DDB_G0275275
OS=Dictyostelium discoideum GN=DDB_G0275275 PE=4 SV=1
Length = 542

Score = 30.8 bits (68), Expect = 8.4
Identities = 26/105 (24%), Positives = 46/105 (43%)
Frame = -3

Query: 558 LAEPQPTGLISNHISKALGTYLICFHDSSPLTSLTRSLEELDASKSISSRALLQRFIRSN 379
L E Q +I+NHI+ ++ + + PL + S + + S SS++ L + +
Sbjct: 43 LTEQQQQQIINNHINNSISSENLVI----PLNNYEESPTQSNISSCYSSQSNLSSYSSTG 98

Query: 378 NFVRHHA*QSPKWGLVVSSLTSAMSTGSCNGNVVNSCLNADSRDS 244
+ S +G S+ S S N N+ NS ++ RDS
Sbjct: 99 SL-------SSYYGSNYYHGASSSSISSINSNIANSNSSSTGRDS 136


tr_hit_id Q9Z4X6
Definition tr|Q9Z4X6|Q9Z4X6_STRCO CDA peptide synthetase I OS=Streptomyces coelicolor
Align length 102
Score (bit) 35.0
E-value 5.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK957569|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0028_L12, 5'
(758 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q9Z4X6|Q9Z4X6_STRCO CDA peptide synthetase I OS=Streptomyces ... 35 5.4

>tr|Q9Z4X6|Q9Z4X6_STRCO CDA peptide synthetase I OS=Streptomyces
coelicolor GN=cdaPSI PE=3 SV=1
Length = 7463

Score = 35.0 bits (79), Expect = 5.4
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 9/102 (8%)
Frame = +2

Query: 56 GRSKKLCGAMTRIRDRF--SVAEVLIQVFLRVI------PGKANNKLVLLSNSQRLALL- 208
GRS L GA+ D F S A L++ F+R + PG +++ +L+ S+R +LL
Sbjct: 6284 GRSTGLTGALDFRTDLFDRSTARSLVERFVRTLEAVVADPGVRLSRVPVLTGSERRSLLD 6343

Query: 209 AAWAPMVADLKCESLESAFRQLFTTLPLQDPVLIALVKEETT 334
P++ E L++ +LF L+ P ALV+ TT
Sbjct: 6344 RGTGPLL-----EGLDATLPELFAEQALRTPGAPALVRGGTT 6380