DK957597 [AcEST]

DK957597
Clone id	TST39A01NGRL0028_M16
Library	TST39
Length	487
Definition	Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0028_M16. 5' end sequence.
Accession	DK957597
Tissue type	prothallia with plantlets
Developmental stage	gametophytes with sporophytes
Contig ID	CL792Contig1
Sequence	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGGACGAGCGATCGGCAGGCCACGATG TCGTCGAAGCAGGGTGGTAAAGCCAAACCCTTGAAGGCTCCCAAGGCAGATAAAAAAGAG TACGATGAGAACGAGAAGGCGTTTCTACAGAAAAAAAAGGAGGAAGAGAAGGCTATGAAA GATCTGAAGGCCAAAGCAGCTGGCAAGGCACCTTTGCCGGGTCAGGCTTGAAGAAAAGTG GCAGTGGTGGAAAGAAATGATATTACTAGCAGGCACTTGTGAAAGCACTCCTTTTTTTGT GGCATGTATTATGCACACAGACTGGGATGAAGCGTATAAAGTTTTTAGCCAGTTTATCAT GAGCCCTCTCTTATTAGAGGCCAAGGTACTAGGATGAAGTGGATGTTCTGTTGACCTTGG ATGTAATCATGCCGATGCTTGTGAATAAGTGGTCGTCTTTTATGGCAAAAAAAAAAAAAA AAAAAAA
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	Q9LIL5
Definition	sp\|Q9LIL5\|PP233_ARATH Putative pentatricopeptide repeat-containing protein At3g15200 OS=Arabidopsis thaliana
Align length	28
Score (bit)	29.6
E-value	6.8
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK957597\|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0028_M16, 5' (466 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|Q9LIL5\|PP233_ARATH Putative pentatricopeptide repeat-containi... 30 6.8 >sp\|Q9LIL5\|PP233_ARATH Putative pentatricopeptide repeat-containing protein At3g15200 OS=Arabidopsis thaliana GN=At3g15200 PE=3 SV=1 Length = 523 Score = 29.6 bits (65), Expect = 6.8 Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 1/28 (3%) Frame = +2 Query: 200 LARHLCRVRLEEK-WQWWKEMILLAGTC 280 L +HLC++R EK W+ +EM L G+C Sbjct: 358 LLKHLCKIRRTEKVWELVEEMELKGGSC 385
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK957597\|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0028_M16, 5' (466 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done *** No hits found ****