DK957607 |
Clone id |
TST39A01NGRL0028_N02 |
Library |
TST39 |
Length |
662 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0028_N02. 5' end sequence. |
Accession |
DK957607 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL655Contig1 |
Sequence |
CACTGACTTCCAGCTTCCTGAATCCTATACACCTTCCTAAACAGACGAGCATCACACACA CACACACACACACACACACACACATTCATCTCGCCATGGCCGACGAAGCGCTCATCTATG CCAACGAGAAGGAGCCCGAGACTAAACACGCACACAAGGGCGAGAATGAAGCACATGAAG GTGATGGCGAGACGGTCGTGATCGCGGAGGGGGTGCCCCTCCTTGCCCAGCCCGCTGTAG TTGATACTCCTACTTCTCCGTGGACTACTGGACTATTTTCCTGCTTCGGCAACAACGATG AATTTTTTAGCAGCGATCTCGAAGTCTGTGTGCTGGGCACATTTGCTCCTTGCTTCTTAT ACGCTAGTAATGTGGAACGCCTTCATCCGACAACAGAGAATACCTTAACTAACCATTTCT GTACATATAGTGGGTTATTTTGCCTTGGGAATTTTATCTTTGGCTGTAATGCCTTGGCGC CTTGTTTCTCCAGCGCCAGTCGCACAGAGCTTAGGAGGAAGTACAATCTAATGGGCTCTA GTGAGTGCTTTGCAAAGTCCTGTGGATGTGGTGCTCATTTTGCTGAAAGTAGCGACCGTG AGTGCATGGAGACAGTTGGCGACTTTGCCACCCACTACATATGCCATACATGTGCTCTCT GT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q6NUC1 |
Definition |
sp|Q6NUC1|CNFNA_XENLA Cornifelin homolog A OS=Xenopus laevis |
Align length |
115 |
Score (bit) |
33.5 |
E-value |
1.0 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NLR4 |
Definition |
tr|A9NLR4|A9NLR4_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
181 |
Score (bit) |
163.0 |
E-value |
1.0e-38 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK957607|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0028_N02, 5' (662 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NLR4|A9NLR4_PICSI Putative uncharacterized protein OS=Picea... 163 1e-38 tr|B6TKP2|B6TKP2_MAIZE SAT5 OS=Zea mays PE=2 SV=1 162 2e-38 tr|A9NZR9|A9NZR9_PICSI Putative uncharacterized protein OS=Picea... 162 2e-38 tr|B4FUS3|B4FUS3_MAIZE Putative uncharacterized protein OS=Zea m... 161 4e-38 tr|Q8LF95|Q8LF95_ARATH Putative uncharacterized protein OS=Arabi... 160 7e-38 tr|Q9ZQC8|Q9ZQC8_ARATH Expressed protein (Putative uncharacteriz... 160 9e-38 tr|Q6ULR9|Q6ULR9_PEA SAT5 OS=Pisum sativum PE=2 SV=1 159 1e-37 tr|B7FN28|B7FN28_MEDTR Putative uncharacterized protein OS=Medic... 157 4e-37 tr|B7FMT4|B7FMT4_MEDTR Putative uncharacterized protein (Fragmen... 157 6e-37 tr|A9TS84|A9TS84_PHYPA Predicted protein OS=Physcomitrella paten... 157 7e-37 tr|Q9FYQ0|Q9FYQ0_ORYSJ cDNA clone:J023134D11, full insert sequen... 154 6e-36 tr|B8ADD1|B8ADD1_ORYSI Putative uncharacterized protein OS=Oryza... 154 6e-36 tr|A9P9B1|A9P9B1_POPTR Putative uncharacterized protein OS=Popul... 153 1e-35 tr|A9PIG0|A9PIG0_POPTR Putative uncharacterized protein OS=Popul... 148 3e-34 tr|B7FGM4|B7FGM4_MEDTR Putative uncharacterized protein OS=Medic... 144 4e-33 tr|A9RT54|A9RT54_PHYPA Predicted protein OS=Physcomitrella paten... 138 3e-31 tr|A9RQI4|A9RQI4_PHYPA Predicted protein OS=Physcomitrella paten... 128 3e-28 tr|A5BZQ0|A5BZQ0_VITVI Putative uncharacterized protein OS=Vitis... 66 2e-09 tr|A7PTI7|A7PTI7_VITVI Chromosome chr8 scaffold_29, whole genome... 65 3e-09 tr|B4FHF9|B4FHF9_MAIZE Putative uncharacterized protein OS=Zea m... 63 1e-08 tr|Q8S8T8|Q8S8T8_ARATH Expressed protein (At2g40935) (Putative u... 60 1e-07 tr|B4FF80|B4FF80_MAIZE Putative uncharacterized protein OS=Zea m... 54 7e-06 tr|B6TTK2|B6TTK2_MAIZE ORFX OS=Zea mays PE=2 SV=1 54 1e-05 tr|A7P3S9|A7P3S9_VITVI Chromosome chr1 scaffold_5, whole genome ... 51 7e-05 tr|A5B084|A5B084_VITVI Putative uncharacterized protein OS=Vitis... 51 7e-05 tr|A5AQS6|A5AQS6_VITVI Putative uncharacterized protein OS=Vitis... 51 7e-05 tr|A2ZRL1|A2ZRL1_ORYSJ Putative uncharacterized protein OS=Oryza... 51 7e-05 tr|A2WN89|A2WN89_ORYSI Putative uncharacterized protein OS=Oryza... 51 7e-05 tr|A2ZPH1|A2ZPH1_ORYSJ Putative uncharacterized protein OS=Oryza... 50 1e-04 tr|A9NSX1|A9NSX1_PICSI Putative uncharacterized protein OS=Picea... 50 2e-04
>tr|A9NLR4|A9NLR4_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 222
Score = 163 bits (412), Expect = 1e-38 Identities = 89/181 (49%), Positives = 112/181 (61%), Gaps = 5/181 (2%) Frame = +3
Query: 135 PETKHAHKGEN--EAHEGDGETVVIAEGVPLLAQPAVVDTPTS--PWTTGLFSCFGNNDE 302 P+ + +GE E E G TV +GVP+ V+ +P S W + L +C G NDE Sbjct: 12 PKQEETAQGEAVPEQREAVGWTV---DGVPI-GHGNVMGSPVSRSQWNSSLLACLGRNDE 67
Query: 303 FFSSDLEVCVLGTFAPCFLYASNVERLHPTTENTLTNHFCTYSGLFCLGNFIFGCNALAP 482 F +SDLEVC+LGT PCFLY SNVERL +T T NH YS L+ LG F+FG N LAP Sbjct: 68 FCTSDLEVCLLGTLFPCFLYGSNVERL-TSTPGTFANHCLPYSSLYLLGRFLFGSNCLAP 126
Query: 483 CFSSASRTELRRKYNLMGSSECFAKSCGCGAHFAESSD-RECMETVGDFATHYICHTCAL 659 FS SRT +RR +NL GS E ++SCGC + E + RE E++ DFATH+ CH CAL Sbjct: 127 WFSYPSRTAIRRNFNLEGSCEALSRSCGCCRGYMEDDEQREQCESICDFATHFFCHQCAL 186
Query: 660 C 662 C Sbjct: 187 C 187
>tr|B6TKP2|B6TKP2_MAIZE SAT5 OS=Zea mays PE=2 SV=1 Length = 233
Score = 162 bits (410), Expect = 2e-38 Identities = 88/182 (48%), Positives = 108/182 (59%), Gaps = 1/182 (0%) Frame = +3
Query: 120 ANEKEPETKHAHKGENEAHEGDGETVVIAEGVPLLAQPAVVDTPTSPWTTGLFSCFGNND 299 A+EK P+ A E + DG VV+ E V A V P W +G+ SC G ND Sbjct: 23 ADEKPPQ---APAPEAANYYADGVPVVMGEPVSAHAFGGV---PRESWNSGILSCLGRND 76
Query: 300 EFFSSDLEVCVLGTFAPCFLYASNVERLHPTTENTLTNHFCTYSGLFCLGNFIFGCNALA 479 EF SSD+EVC+LGT APC LY SNVERL + T N Y+GL+ LGN +FG N LA Sbjct: 77 EFCSSDVEVCLLGTVAPCVLYGSNVERL-AAGQGTFANSCLPYTGLYLLGNSLFGWNCLA 135
Query: 480 PCFSSASRTELRRKYNLMGSSECFAKSCGCGAHFAESSD-RECMETVGDFATHYICHTCA 656 P FS +RT +R++YNL GS E F + CGC E + RE +E D ATHY+CH CA Sbjct: 136 PWFSHPTRTAIRQRYNLEGSFEAFTRQCGCCGDLVEDEERREHLEAACDLATHYLCHPCA 195
Query: 657 LC 662 LC Sbjct: 196 LC 197
>tr|A9NZR9|A9NZR9_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 222
Score = 162 bits (409), Expect = 2e-38 Identities = 88/181 (48%), Positives = 112/181 (61%), Gaps = 5/181 (2%) Frame = +3
Query: 135 PETKHAHKGEN--EAHEGDGETVVIAEGVPLLAQPAVVDTPTS--PWTTGLFSCFGNNDE 302 P+ + +GE E E G TV +G+P+ V+ +P S W + L +C G NDE Sbjct: 12 PKQEETAQGEAVPEQREAVGWTV---DGLPI-GHGNVMGSPVSRSQWNSSLLACLGRNDE 67
Query: 303 FFSSDLEVCVLGTFAPCFLYASNVERLHPTTENTLTNHFCTYSGLFCLGNFIFGCNALAP 482 F +SDLEVC+LGT PCFLY SNVERL +T T NH YS L+ LG F+FG N LAP Sbjct: 68 FCTSDLEVCLLGTLFPCFLYGSNVERL-TSTPGTFANHCLPYSSLYLLGRFLFGSNCLAP 126
Query: 483 CFSSASRTELRRKYNLMGSSECFAKSCGCGAHFAESSD-RECMETVGDFATHYICHTCAL 659 FS SRT +RR +NL GS E ++SCGC + E + RE E++ DFATH+ CH CAL Sbjct: 127 WFSYPSRTAIRRNFNLEGSCEALSRSCGCCRGYMEDDEQREQCESICDFATHFFCHQCAL 186
Query: 660 C 662 C Sbjct: 187 C 187
>tr|B4FUS3|B4FUS3_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 233
Score = 161 bits (407), Expect = 4e-38 Identities = 88/182 (48%), Positives = 107/182 (58%), Gaps = 1/182 (0%) Frame = +3
Query: 120 ANEKEPETKHAHKGENEAHEGDGETVVIAEGVPLLAQPAVVDTPTSPWTTGLFSCFGNND 299 A EK P+ A E + DG VV+ E V A V P W +G+ SC G ND Sbjct: 23 AYEKPPQ---APAPEAANYYADGVPVVMGEPVSAHAFGGV---PRESWNSGILSCLGRND 76
Query: 300 EFFSSDLEVCVLGTFAPCFLYASNVERLHPTTENTLTNHFCTYSGLFCLGNFIFGCNALA 479 EF SSD+EVC+LGT APC LY SNVERL + T N Y+GL+ LGN +FG N LA Sbjct: 77 EFCSSDVEVCLLGTVAPCVLYGSNVERL-AAGQGTFANSCLPYTGLYLLGNSLFGWNCLA 135
Query: 480 PCFSSASRTELRRKYNLMGSSECFAKSCGCGAHFAESSD-RECMETVGDFATHYICHTCA 656 P FS +RT +R++YNL GS E F + CGC E + RE +E D ATHY+CH CA Sbjct: 136 PWFSHPTRTAIRQRYNLEGSFEAFTRQCGCCGDLVEDEERREHLEAACDLATHYLCHPCA 195
Query: 657 LC 662 LC Sbjct: 196 LC 197
>tr|Q8LF95|Q8LF95_ARATH Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1 Length = 242
Score = 160 bits (405), Expect = 7e-38 Identities = 80/156 (51%), Positives = 105/156 (67%), Gaps = 3/156 (1%) Frame = +3
Query: 204 AEGVPLLAQPAVVDTPT--SPWTTGLFSCFGNNDEFFSSDLEVCVLGTFAPCFLYASNVE 377 A+G+P+ + +V+ P + W +GLF+C G NDEF SSDLEVC+LG+ APC LY +N E Sbjct: 55 ADGLPV-SHGSVIGEPIRRNQWNSGLFTCLGRNDEFCSSDLEVCLLGSVAPCVLYGTNAE 113
Query: 378 RLHPTTENTLTNHFCTYSGLFCLGNFIFGCNALAPCFSSASRTELRRKYNLMGSSECFAK 557 RL + T +NH TY GL+ +GN +FG N LAP FS +SR+ +RRK+NL GS E + Sbjct: 114 RLG-SAPGTFSNHCLTYLGLYFIGNSLFGWNCLAPWFSYSSRSAIRRKFNLEGSFEAMNR 172
Query: 558 SCG-CGAHFAESSDRECMETVGDFATHYICHTCALC 662 SCG CG + RE +ET DF TH +CHTCALC Sbjct: 173 SCGCCGGCIEDEMQREHLETTCDFVTHVLCHTCALC 208
>tr|Q9ZQC8|Q9ZQC8_ARATH Expressed protein (Putative uncharacterized protein At2g37110) (At2g37110) OS=Arabidopsis thaliana GN=At2g37110 PE=2 SV=1 Length = 242
Score = 160 bits (404), Expect = 9e-38 Identities = 80/156 (51%), Positives = 105/156 (67%), Gaps = 3/156 (1%) Frame = +3
Query: 204 AEGVPLLAQPAVVDTPT--SPWTTGLFSCFGNNDEFFSSDLEVCVLGTFAPCFLYASNVE 377 A+G+P+ + +V+ P + W +GLF+C G NDEF SSDLEVC+LG+ APC LY +N E Sbjct: 55 ADGLPV-SHGSVIGEPIRRNQWNSGLFTCLGRNDEFCSSDLEVCLLGSVAPCVLYGTNAE 113
Query: 378 RLHPTTENTLTNHFCTYSGLFCLGNFIFGCNALAPCFSSASRTELRRKYNLMGSSECFAK 557 RL + T +NH TY GL+ +GN +FG N LAP FS +SR+ +RRK+NL GS E + Sbjct: 114 RLG-SAPGTFSNHCLTYLGLYFVGNSLFGWNCLAPWFSYSSRSAIRRKFNLEGSFEAMNR 172
Query: 558 SCG-CGAHFAESSDRECMETVGDFATHYICHTCALC 662 SCG CG + RE +ET DF TH +CHTCALC Sbjct: 173 SCGCCGGCIEDEMQREHLETTCDFVTHVLCHTCALC 208
>tr|Q6ULR9|Q6ULR9_PEA SAT5 OS=Pisum sativum PE=2 SV=1 Length = 235
Score = 159 bits (402), Expect = 1e-37 Identities = 84/183 (45%), Positives = 108/183 (59%), Gaps = 3/183 (1%) Frame = +3
Query: 123 NEKEPETKHAHKGENEA--HEGDGETVVIAEGVPLLAQPAVVDTPTSPWTTGLFSCFGNN 296 ++++P K A + E H + V IA G ++ QP P SPW + + +C G + Sbjct: 23 HQQQPPPKAAEQPTQEELFHLWTADGVPIAHG-SVMGQPI----PRSPWNSSVCACLGQS 77
Query: 297 DEFFSSDLEVCVLGTFAPCFLYASNVERLHPTTENTLTNHFCTYSGLFCLGNFIFGCNAL 476 D F SSDLEVC+LG+ APC LY SNVERL T NH YSGL+ +GN G N L Sbjct: 78 DHFCSSDLEVCLLGSVAPCVLYGSNVERLGSNNSGTFANHCLHYSGLYVIGNSCCGWNCL 137
Query: 477 APCFSSASRTELRRKYNLMGSSECFAKSCG-CGAHFAESSDRECMETVGDFATHYICHTC 653 AP FS SRT +RR++NL GS E +SCG CG+ + + RE E DFATH+ CH C Sbjct: 138 APWFSYPSRTAIRRRFNLEGSCEALNRSCGCCGSFLEDEAQREQCELACDFATHFFCHAC 197
Query: 654 ALC 662 ALC Sbjct: 198 ALC 200
>tr|B7FN28|B7FN28_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 231
Score = 157 bits (398), Expect = 4e-37 Identities = 84/184 (45%), Positives = 105/184 (57%), Gaps = 6/184 (3%) Frame = +3
Query: 129 KEPETKHAHKGENEAHEGDGETVVIAEGVPL-----LAQPAVVDTPTSPWTTGLFSCFGN 293 K+ + K E + D A+G+P+ + QP P SPW + +C G Sbjct: 18 KQQPPQQPPKAEQTTEQQDRYLGWTADGLPISHGSVMGQPI----PRSPWNSSACACLGQ 73
Query: 294 NDEFFSSDLEVCVLGTFAPCFLYASNVERLHPTTENTLTNHFCTYSGLFCLGNFIFGCNA 473 ND F SSDLEVC+LG+ APC LY SN+ERLH + T NH YSGL+ +GN FG N Sbjct: 74 NDHFCSSDLEVCLLGSVAPCVLYGSNMERLH-SNPGTFGNHCLHYSGLYVIGNPCFGWNC 132
Query: 474 LAPCFSSASRTELRRKYNLMGSSECFAKSCG-CGAHFAESSDRECMETVGDFATHYICHT 650 LAP S SRTE+RR++NL GS E +SCG CG++ RE E DFATH CH Sbjct: 133 LAPWLSYHSRTEIRRRFNLEGSCEALNRSCGCCGSYLENEEQREHYELACDFATHVFCHV 192
Query: 651 CALC 662 CALC Sbjct: 193 CALC 196
>tr|B7FMT4|B7FMT4_MEDTR Putative uncharacterized protein (Fragment) OS=Medicago truncatula PE=2 SV=1 Length = 226
Score = 157 bits (397), Expect = 6e-37 Identities = 83/184 (45%), Positives = 105/184 (57%), Gaps = 6/184 (3%) Frame = +3
Query: 129 KEPETKHAHKGENEAHEGDGETVVIAEGVPL-----LAQPAVVDTPTSPWTTGLFSCFGN 293 K+ + K E + D A+G+P+ + QP P SPW + +C G Sbjct: 18 KQQPPQQPPKAEQTTEQQDRYLGWTADGLPISHGSVMGQPI----PRSPWNSSACACLGQ 73
Query: 294 NDEFFSSDLEVCVLGTFAPCFLYASNVERLHPTTENTLTNHFCTYSGLFCLGNFIFGCNA 473 ND F SSDLEVC+LG+ APC LY +N+ERLH + T NH YSGL+ +GN FG N Sbjct: 74 NDHFCSSDLEVCLLGSVAPCVLYGNNMERLH-SNPGTFGNHCLHYSGLYVIGNSCFGWNC 132
Query: 474 LAPCFSSASRTELRRKYNLMGSSECFAKSCG-CGAHFAESSDRECMETVGDFATHYICHT 650 LAP S SRTE+RR++NL GS E +SCG CG++ RE E DFATH CH Sbjct: 133 LAPWLSYHSRTEIRRRFNLEGSCEALNRSCGCCGSYLENEEQREHYELACDFATHVFCHV 192
Query: 651 CALC 662 CALC Sbjct: 193 CALC 196
>tr|A9TS84|A9TS84_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_197685 PE=4 SV=1 Length = 223
Score = 157 bits (396), Expect = 7e-37 Identities = 85/192 (44%), Positives = 107/192 (55%), Gaps = 2/192 (1%) Frame = +3
Query: 93 AMADEALIYANEKEPETKHAHKGENEAHEGDGETVVIAEGVPLLAQPAVVDTPT--SPWT 266 A+ E Y EKEPETK A E + +GVP+ V+ P SPW+ Sbjct: 14 ALLAECKFYEGEKEPETKDAKLDHYEP--------AVVDGVPVGPPSTVLGAPVPRSPWS 65
Query: 267 TGLFSCFGNNDEFFSSDLEVCVLGTFAPCFLYASNVERLHPTTENTLTNHFCTYSGLFCL 446 T L SCFG+ DE F+SDL+VCV+GTFAPC LY SN+ERL+P E +H YS L+ + Sbjct: 66 TSLLSCFGSFDEHFTSDLQVCVMGTFAPCVLYGSNMERLYPGEEGISRHHCLMYSYLYIM 125
Query: 447 GNFIFGCNALAPCFSSASRTELRRKYNLMGSSECFAKSCGCGAHFAESSDRECMETVGDF 626 G + N LAPC S SR LRRKYNL GS +C C + RE T D Sbjct: 126 GANLLNLN-LAPCISVGSRVALRRKYNLEGSGDC------CFTESGDEESREGFNTFCDV 178
Query: 627 ATHYICHTCALC 662 +H++CH+CALC Sbjct: 179 FSHFVCHSCALC 190
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