DK957644 |
Clone id |
TST39A01NGRL0028_O15 |
Library |
TST39 |
Length |
528 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0028_O15. 5' end sequence. |
Accession |
DK957644 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL4182Contig1 |
Sequence |
TCCACCTCGAAGCACTTCATCGTCGCTCGCTCAACGGATCGGGCGCCATAGCTGGCTCCA TTGTCCTTTCCCTCTCCTTCCTAGCGGGCTTCAGATATGGCGCGTTGATCTTGGGATTCT TTTTCAGCTCCTCCAGACTTACAAAGCATGGAGCTGAAGTCAAGAAGGAATTGGAAGGGG TTGACTACAAACATGGGGGACAACGCAACTGGTATACATTGTTTTTTTGTTTCTGGATGA GATGAATGCATGGCCATCAAAAGTCCTAGGTTTTCAAGCTGGAGGTGTGAATTAGAATGA AATGAATGCATGGCTATCAAAAGTTTAAGTTGGAGGTGTTGATTGTAAGACGCTCTCTTG CCAACGATAATGTCTTGCTGACCGTGACAACTCGTTTACGTATGTTGTCGAATTGTTTGT TTTTGAGCCAAGTAGGTAAAAGAACTACACACTTGTAATTTGATGGAAATTGTAAGACGG TTGGATTGCAGCACTGGGTGTAGATGCATGTACAATTTGAACACTGCC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q96HH6 |
Definition |
sp|Q96HH6|TMM19_HUMAN Transmembrane protein 19 OS=Homo sapiens |
Align length |
70 |
Score (bit) |
63.2 |
E-value |
8.0e-10 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q5QMR4 |
Definition |
tr|Q5QMR4|Q5QMR4_ORYSJ cDNA clone:J013111E19, full insert sequence OS=Oryza sativa subsp. japonica |
Align length |
67 |
Score (bit) |
80.5 |
E-value |
5.0e-14 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK957644|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0028_O15, 5' (528 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q5QMR4|Q5QMR4_ORYSJ cDNA clone:J013111E19, full insert sequen... 80 5e-14 tr|B8A8V9|B8A8V9_ORYSI Putative uncharacterized protein OS=Oryza... 80 8e-14 tr|A7PEW1|A7PEW1_VITVI Chromosome chr11 scaffold_13, whole genom... 77 4e-13 tr|B8A1V2|B8A1V2_MAIZE Putative uncharacterized protein OS=Zea m... 77 7e-13 tr|Q8LF53|Q8LF53_ARATH Putative uncharacterized protein OS=Arabi... 75 2e-12 tr|Q0WP96|Q0WP96_ARATH Putative uncharacterized protein At5g1993... 75 2e-12 tr|A9NSQ5|A9NSQ5_PICSI Putative uncharacterized protein OS=Picea... 74 5e-12 tr|B2RDL2|B2RDL2_HUMAN cDNA, FLJ96665 (Transmembrane protein 19,... 63 8e-09 tr|A2ZTM1|A2ZTM1_ORYSJ Putative uncharacterized protein OS=Oryza... 60 9e-08 tr|A7E3R1|A7E3R1_BOVIN Transmembrane protein 19 OS=Bos taurus GN... 60 9e-08 tr|Q5VRD8|Q5VRD8_ORYSJ Putative uncharacterized protein P0509B06... 59 2e-07 tr|A2WLC0|A2WLC0_ORYSI Putative uncharacterized protein OS=Oryza... 59 2e-07 tr|Q4RGT8|Q4RGT8_TETNG Chromosome undetermined SCAF15092, whole ... 57 4e-07 tr|B4KZP2|B4KZP2_DROMO GI13550 OS=Drosophila mojavensis GN=GI135... 57 4e-07 tr|A7RF39|A7RF39_NEMVE Predicted protein OS=Nematostella vectens... 57 4e-07 tr|Q6IQ88|Q6IQ88_DANRE Transmembrane protein 19 OS=Danio rerio G... 56 1e-06 tr|B4FN83|B4FN83_MAIZE Putative uncharacterized protein OS=Zea m... 56 1e-06 tr|Q9VU64|Q9VU64_DROME CG10171, isoform A OS=Drosophila melanoga... 56 1e-06 tr|Q8IQJ7|Q8IQJ7_DROME CG10171, isoform B OS=Drosophila melanoga... 56 1e-06 tr|Q6AWL9|Q6AWL9_DROME RE14111p OS=Drosophila melanogaster PE=2 ... 56 1e-06 tr|B4PHE2|B4PHE2_DROYA GE20072 OS=Drosophila yakuba GN=GE20072 P... 56 1e-06 tr|B4HGS0|B4HGS0_DROSE GM24600 OS=Drosophila sechellia GN=GM2460... 56 1e-06 tr|B3NHE3|B3NHE3_DROER GG13778 OS=Drosophila erecta GN=GG13778 P... 56 1e-06 tr|Q0JQ74|Q0JQ74_ORYSJ Os01g0178200 protein OS=Oryza sativa subs... 55 2e-06 tr|A5BMK2|A5BMK2_VITVI Putative uncharacterized protein OS=Vitis... 55 2e-06 tr|B4LCH1|B4LCH1_DROVI GJ11909 OS=Drosophila virilis GN=GJ11909 ... 55 3e-06 tr|Q2M024|Q2M024_DROPS GA10130 OS=Drosophila pseudoobscura pseud... 54 6e-06 tr|B4H8Y6|B4H8Y6_DROPE GL15697 OS=Drosophila persimilis GN=GL156... 54 6e-06 tr|Q7Q059|Q7Q059_ANOGA AGAP012271-PA OS=Anopheles gambiae GN=AGA... 52 1e-05 tr|B7PAK4|B7PAK4_IXOSC Transmembrane protein, putative (Fragment... 52 1e-05
>tr|Q5QMR4|Q5QMR4_ORYSJ cDNA clone:J013111E19, full insert sequence OS=Oryza sativa subsp. japonica GN=OSJNBa0094H06.21 PE=2 SV=1 Length = 291
Score = 80.5 bits (197), Expect = 5e-14 Identities = 37/67 (55%), Positives = 51/67 (76%) Frame = +3
Query: 12 ALHRRSLNGSGAIAGSIVLSLSFLAGFRYGALILGFFFSSSRLTKHGAEVKKELEGVDYK 191 A+ RRSL+GSG AG +V+++ G+RYGAL+L FFF+SS+ TK GA+ K+ +E D+K Sbjct: 26 AVRRRSLDGSGGAAGFVVMAIHLACGYRYGALVLAFFFTSSKATKIGADRKRRIED-DFK 84
Query: 192 HGGQRNW 212 GGQRNW Sbjct: 85 EGGQRNW 91
>tr|B8A8V9|B8A8V9_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_02120 PE=4 SV=1 Length = 291
Score = 79.7 bits (195), Expect = 8e-14 Identities = 37/67 (55%), Positives = 51/67 (76%) Frame = +3
Query: 12 ALHRRSLNGSGAIAGSIVLSLSFLAGFRYGALILGFFFSSSRLTKHGAEVKKELEGVDYK 191 A+ RRSL+GSG AG +V+++ G+RYGAL+L FFF+SS+ TK GA+ K+ +E D+K Sbjct: 26 AVRRRSLDGSGGAAGFVVMAIHLACGYRYGALMLAFFFTSSKATKIGADRKRRIED-DFK 84
Query: 192 HGGQRNW 212 GGQRNW Sbjct: 85 EGGQRNW 91
>tr|A7PEW1|A7PEW1_VITVI Chromosome chr11 scaffold_13, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00016810001 PE=4 SV=1 Length = 287
Score = 77.4 bits (189), Expect = 4e-13 Identities = 38/74 (51%), Positives = 51/74 (68%) Frame = +3
Query: 6 LEALHRRSLNGSGAIAGSIVLSLSFLAGFRYGALILGFFFSSSRLTKHGAEVKKELEGVD 185 + + R+SL+ SGA AG VL++ F G+RYGA++L FF +SS+LTK G E KK L D Sbjct: 20 IRSFRRKSLDLSGAFAGFAVLTIHFGVGYRYGAMLLAFFLTSSKLTKFGEE-KKRLVDAD 78
Query: 186 YKHGGQRNWYTLFF 227 +K GGQRNW + F Sbjct: 79 FKEGGQRNWKQVLF 92
>tr|B8A1V2|B8A1V2_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 183
Score = 76.6 bits (187), Expect = 7e-13 Identities = 35/69 (50%), Positives = 52/69 (75%) Frame = +3
Query: 6 LEALHRRSLNGSGAIAGSIVLSLSFLAGFRYGALILGFFFSSSRLTKHGAEVKKELEGVD 185 + A+ RRSL+ SG +AG +V+++ G+RYGAL+L FFFSSS++TK G + K+ +E + Sbjct: 27 VRAVRRRSLDASGGVAGFVVMAVHISCGYRYGALLLAFFFSSSKVTKIGEDHKRRIE-EN 85
Query: 186 YKHGGQRNW 212 +K GGQRNW Sbjct: 86 FKEGGQRNW 94
>tr|Q8LF53|Q8LF53_ARATH Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1 Length = 288
Score = 75.5 bits (184), Expect = 2e-12 Identities = 36/64 (56%), Positives = 51/64 (79%) Frame = +3
Query: 21 RRSLNGSGAIAGSIVLSLSFLAGFRYGALILGFFFSSSRLTKHGAEVKKELEGVDYKHGG 200 R+SL+ SG IAG +V+++ F AGFRYGAL+L FF +SS+LTK G + K+ ++ V++K GG Sbjct: 26 RKSLDLSGGIAGFLVMTIHFTAGFRYGALLLVFFLTSSKLTKVGEDKKRRVD-VEFKEGG 84
Query: 201 QRNW 212 QRNW Sbjct: 85 QRNW 88
>tr|Q0WP96|Q0WP96_ARATH Putative uncharacterized protein At5g19930 OS=Arabidopsis thaliana GN=At5g19930 PE=2 SV=1 Length = 288
Score = 75.5 bits (184), Expect = 2e-12 Identities = 36/64 (56%), Positives = 51/64 (79%) Frame = +3
Query: 21 RRSLNGSGAIAGSIVLSLSFLAGFRYGALILGFFFSSSRLTKHGAEVKKELEGVDYKHGG 200 R+SL+ SG IAG +V+++ F AGFRYGAL+L FF +SS+LTK G + K+ ++ V++K GG Sbjct: 26 RKSLDLSGGIAGFLVMTIHFTAGFRYGALLLVFFLTSSKLTKVGEDKKRRVD-VEFKEGG 84
Query: 201 QRNW 212 QRNW Sbjct: 85 QRNW 88
>tr|A9NSQ5|A9NSQ5_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 287
Score = 73.9 bits (180), Expect = 5e-12 Identities = 35/67 (52%), Positives = 50/67 (74%) Frame = +3
Query: 12 ALHRRSLNGSGAIAGSIVLSLSFLAGFRYGALILGFFFSSSRLTKHGAEVKKELEGVDYK 191 + R S+N SGA AG +V++ + A +R+GAL+L FFF+SS+LTK GAE K+E++ YK Sbjct: 22 SFRRNSVNLSGAFAGFLVMAATITASYRFGALLLVFFFTSSKLTKRGAEKKREID-AHYK 80
Query: 192 HGGQRNW 212 GGQR+W Sbjct: 81 EGGQRDW 87
>tr|B2RDL2|B2RDL2_HUMAN cDNA, FLJ96665 (Transmembrane protein 19, isoform CRA_a) OS=Homo sapiens GN=TMEM19 PE=2 SV=1 Length = 336
Score = 63.2 bits (152), Expect = 8e-09 Identities = 33/70 (47%), Positives = 46/70 (65%) Frame = +3
Query: 15 LHRRSLNGSGAIAGSIVLSLSFLAGFRYGALILGFFFSSSRLTKHGAEVKKELEGVDYKH 194 L ++SL+ SGA+ G +V + +A F + +L FF SSS+LTK EVKK L+ +YK Sbjct: 69 LKKKSLDHSGALGGLVVGFILTIANFSFFTSLLMFFLSSSKLTKWKGEVKKRLDS-EYKE 127
Query: 195 GGQRNWYTLF 224 GGQRNW +F Sbjct: 128 GGQRNWVQVF 137
>tr|A2ZTM1|A2ZTM1_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_001893 PE=4 SV=1 Length = 264
Score = 59.7 bits (143), Expect = 9e-08 Identities = 26/49 (53%), Positives = 37/49 (75%) Frame = +3
Query: 66 LSLSFLAGFRYGALILGFFFSSSRLTKHGAEVKKELEGVDYKHGGQRNW 212 +++ G+RYGAL+L FFF+SS+ TK GA+ K+ +E D+K GGQRNW Sbjct: 1 MAIHLACGYRYGALVLAFFFTSSKATKIGADRKRRIED-DFKEGGQRNW 48
>tr|A7E3R1|A7E3R1_BOVIN Transmembrane protein 19 OS=Bos taurus GN=TMEM19 PE=2 SV=1 Length = 336
Score = 59.7 bits (143), Expect = 9e-08 Identities = 30/68 (44%), Positives = 44/68 (64%) Frame = +3
Query: 21 RRSLNGSGAIAGSIVLSLSFLAGFRYGALILGFFFSSSRLTKHGAEVKKELEGVDYKHGG 200 ++SL+ SGA+ G +V + +A F + ++ FF SSS+LTK E KK L+ +YK GG Sbjct: 71 KKSLDHSGALGGLVVGFILTIANFSFFTSLVTFFLSSSKLTKWKGEAKKHLDS-EYKEGG 129
Query: 201 QRNWYTLF 224 QRNW +F Sbjct: 130 QRNWIQVF 137
|