DK957649 |
Clone id |
TST39A01NGRL0028_O20 |
Library |
TST39 |
Length |
639 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0028_O20. 5' end sequence. |
Accession |
DK957649 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL240Contig1 |
Sequence |
CTCCGCCAAAGCTGAGGCTCATGAAGGTTGGCTACTACGCTGCCCTGCTGGGCATCGCCG CCTTCAGCTGCATGTGGGTTCTTTGGTGGCTCCTCTCCAGCGAGCCCGCCGACTCGCCGG ACGGCCACTACCTGGACCGCCTCGACAAGCACATCCCCTCCCGCTTTTTCCGCACAGATG GCTACTACGGCTCCGTCCTCATCTACCAAAGCGCTCCATTCATCATCGTGGCCCTCCTCA GCCTCGTCGTCGTCGAGCTCAGGAAGAAGTTGAATTCCTCATCAAGCCATGAAACTGAAA AGGGAATAAGCAAAAGCTCTCCAAGTCTCACGACTTACCCGCTCGTGATCAAGAGTTTCA TGGGAGTGCTCACAAGTGCAGACGTTCTCTTCATTCTAGGGATCCTCTTCCTTGTCGCCT ACACTTTTGGGAGACAATGCCACTTGTCCTTCCAAGACCTTGAGAGAGAATATAAGGAGA ACCCTAGCGAATTCGATGACTCTTTGGTGATCATAAAGTTTGCATATGCTGCTTATTACA TGGGACGATCGGCTATGATACCATTTTCTCTGCTTTGGATCCCTGTATCAAGAGGATCTC CTTTCTTAAGATTGATCAACATGCCTTTTGAGCATGCTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9ZLR4 |
Definition |
sp|Q9ZLR4|Y567_HELPJ UPF0118 membrane protein jhp_0514 OS=Helicobacter pylori J99 |
Align length |
123 |
Score (bit) |
34.3 |
E-value |
0.56 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SL39 |
Definition |
tr|A9SL39|A9SL39_PHYPA Ferric reductase-like transmembrane component OS=Physcomitrella patens subsp. patens |
Align length |
191 |
Score (bit) |
84.0 |
E-value |
7.0e-15 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK957649|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0028_O20, 5' (639 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SL39|A9SL39_PHYPA Ferric reductase-like transmembrane compo... 84 7e-15 tr|A7PZM2|A7PZM2_VITVI Chromosome chr15 scaffold_40, whole genom... 69 3e-10 tr|A9S0A4|A9S0A4_PHYPA Ferric reductase like transmembrane compo... 67 9e-10 tr|A9U5F8|A9U5F8_PHYPA Ferric reductase-like transmembrane compo... 67 1e-09 tr|A9RKK9|A9RKK9_PHYPA Ferric reductase like transmembrane compo... 65 5e-09 tr|A7R0A2|A7R0A2_VITVI Chromosome undetermined scaffold_301, who... 60 1e-07 tr|Q6T303|Q6T303_MEDTR Ferric reductase OS=Medicago truncatula G... 59 2e-07 tr|A5C425|A5C425_VITVI Putative uncharacterized protein OS=Vitis... 59 2e-07 tr|B8A3B5|B8A3B5_MAIZE Putative uncharacterized protein OS=Zea m... 58 4e-07 tr|B6SW74|B6SW74_MAIZE Ferric reductase-like transmembrane compo... 58 6e-07 tr|A7PZM1|A7PZM1_VITVI Chromosome chr15 scaffold_40, whole genom... 58 6e-07 tr|A5ATI3|A5ATI3_VITVI Putative uncharacterized protein OS=Vitis... 58 6e-07 tr|Q7XUW2|Q7XUW2_ORYSJ OSJNBa0027P08.6 protein OS=Oryza sativa s... 57 1e-06 tr|Q6PND7|Q6PND7_CUCSA Ferric reductase OS=Cucumis sativus PE=2 ... 57 1e-06 tr|Q6L8G3|Q6L8G3_ORYSJ Ferric reductase OS=Oryza sativa subsp. j... 57 1e-06 tr|Q0JCX7|Q0JCX7_ORYSJ Os04g0444800 protein OS=Oryza sativa subs... 57 1e-06 tr|B8AUC6|B8AUC6_ORYSI Putative uncharacterized protein OS=Oryza... 57 1e-06 tr|A3AU74|A3AU74_ORYSJ Putative uncharacterized protein OS=Oryza... 57 1e-06 tr|A9S7N1|A9S7N1_PHYPA Ferric reductase-like transmembrane compo... 56 2e-06 tr|Q3KTM0|Q3KTM0_ARATH FRO1-like protein OS=Arabidopsis thaliana... 55 3e-06 tr|A7PCT0|A7PCT0_VITVI Chromosome chr17 scaffold_12, whole genom... 55 3e-06 tr|Q2HST1|Q2HST1_MEDTR Ferric reductase-like transmembrane compo... 54 1e-05 tr|Q6EMC0|Q6EMC0_SOLLC Ferric-chelate reductase OS=Solanum lycop... 53 1e-05 tr|A7QG55|A7QG55_VITVI Chromosome undetermined scaffold_91, whol... 53 2e-05 tr|A5BJK1|A5BJK1_VITVI Putative uncharacterized protein OS=Vitis... 53 2e-05 tr|A5BMV8|A5BMV8_VITVI Putative uncharacterized protein OS=Vitis... 52 2e-05 tr|Q9LT99|Q9LT99_ARATH FRO1-like protein; NADPH oxidase-like OS=... 51 5e-05 tr|Q8RWS6|Q8RWS6_ARATH Putative FRO2; NADPH oxidase OS=Arabidops... 50 9e-05 tr|Q000W4|Q000W4_9ROSI Fe(III)-chelate reductase OS=Citrus junos... 50 2e-04 tr|A7QG56|A7QG56_VITVI Chromosome undetermined scaffold_91, whol... 49 2e-04
>tr|A9SL39|A9SL39_PHYPA Ferric reductase-like transmembrane component OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_165498 PE=4 SV=1 Length = 760
Score = 84.0 bits (206), Expect = 7e-15 Identities = 60/191 (31%), Positives = 101/191 (52%), Gaps = 3/191 (1%) Frame = +3
Query: 75 WVLWWLLSSEPADSPDGHYLDRLDKHIPSRFFRTDGYYGSVLIYQSAPFIIVALLSLVVV 254 WV+ W L P D D +++ S+F +G + + S P I+ AL +L+ + Sbjct: 24 WVVEWFLY--PTDRWTSWKADAIEE-TNSKFLELNGPF---FLMWSFPVILFALFALLYL 77
Query: 255 ELRKKLNS---SSSHETEKGISKSSPSLTTYPLVIKSFMGVLTSADVLFILGILFLVAYT 425 E+ ++L + SS + K + L T P+++KS +GVLT D+L I ++F + Sbjct: 78 EVDQRLKAKKESSCTDVPKW-KRVWLRLRTQPILVKSLLGVLTGVDLLVISFVVFATMWI 136
Query: 426 FGRQCHLSFQDLEREYKENPSEFDDSLVIIKFAYAAYYMGRSAMIPFSLLWIPVSRGSPF 605 F + ++++R N + +IK + GR+ +P +LL+IPVSR SPF Sbjct: 137 FVKPLIPMLEEVDR----NTMKPGIDRWMIKVGRVGTWTGRAWYLPMALLFIPVSRNSPF 192
Query: 606 LRLINMPFEHA 638 LRL+N+P+EHA Sbjct: 193 LRLVNLPYEHA 203
>tr|A7PZM2|A7PZM2_VITVI Chromosome chr15 scaffold_40, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00026930001 PE=4 SV=1 Length = 715
Score = 68.6 bits (166), Expect = 3e-10 Identities = 53/198 (26%), Positives = 96/198 (48%), Gaps = 2/198 (1%) Frame = +3
Query: 45 LLGIAAFSCMWVLWWLLSSEPADSPDGHYLDRLDKHIPSRFFRTDGYYGSVLIYQSAPFI 224 LL + C+ VLW ++ P ++ G +L +L S +F G G+ ++ + P + Sbjct: 26 LLLVIFLGCL-VLWVMM---PTNTYRGKWLLQLRAKTDSTYF---GQQGTTMLIYTFPVL 78
Query: 225 IVALLSLVVVELRKKLNSSSSHETEKGISKSSPSLTTY--PLVIKSFMGVLTSADVLFIL 398 A+L V + L KKLN + S + K LT + P ++K +G+++ ++LF + Sbjct: 79 FAAVLGCVYLHLGKKLNDNKSISSPK-----EDRLTVWKKPALVKGPLGIVSMTELLFFV 133
Query: 399 GILFLVAYTFGRQCHLSFQDLEREYKENPSEFDDSLVIIKFAYAAYYMGRSAMIPFSLLW 578 + L+ ++F H FQ +E ++ + L + K AA +G + I + L+ Sbjct: 134 MFIALLVWSFWEYLHNGFQGIEA----TAAKKGEKLWVSKLGAAALRLGLTGNIVLAFLF 189
Query: 579 IPVSRGSPFLRLINMPFE 632 PV+RGS L L + E Sbjct: 190 FPVARGSSILPLFGLTSE 207
>tr|A9S0A4|A9S0A4_PHYPA Ferric reductase like transmembrane component OS=Physcomitrella patens subsp. patens GN=FRO1 PE=4 SV=1 Length = 761
Score = 67.0 bits (162), Expect = 9e-10 Identities = 44/153 (28%), Positives = 81/153 (52%) Frame = +3
Query: 180 GYYGSVLIYQSAPFIIVALLSLVVVELRKKLNSSSSHETEKGISKSSPSLTTYPLVIKSF 359 G G++LI+ APF+++ + S+ +E+ SS K ++ L P++ + Sbjct: 77 GLNGTILIFFGAPFLLLTVFSIASLEV------SSHSPVSKKKARGRAPLKAQPVITEGL 130
Query: 360 MGVLTSADVLFILGILFLVAYTFGRQCHLSFQDLEREYKENPSEFDDSLVIIKFAYAAYY 539 MG++++A++L+I+ L + + F+ E E K P E S+ K + Sbjct: 131 MGMVSAAELLWIVFFLAMCLWIMANYLVPDFKRAETE-KLKPYE---SVWGNKIKFIGLR 186
Query: 540 MGRSAMIPFSLLWIPVSRGSPFLRLINMPFEHA 638 +G ++ +LL++PV+RGS LR I++PFEHA Sbjct: 187 LGFIGIVCLNLLFLPVARGSVMLRAIDIPFEHA 219
>tr|A9U5F8|A9U5F8_PHYPA Ferric reductase-like transmembrane component OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_173734 PE=4 SV=1 Length = 782
Score = 66.6 bits (161), Expect = 1e-09 Identities = 44/150 (29%), Positives = 88/150 (58%) Frame = +3
Query: 189 GSVLIYQSAPFIIVALLSLVVVELRKKLNSSSSHETEKGISKSSPSLTTYPLVIKSFMGV 368 G +L+ ++P +++ LL+++ +E+ ++ + + + +K SL +PL I +MG+ Sbjct: 100 GGLLVLFASPLLVLTLLAIINLEVSSRMVTFNREK-----AKGRASLQKHPLFIGGWMGI 154
Query: 369 LTSADVLFILGILFLVAYTFGRQCHLSFQDLEREYKENPSEFDDSLVIIKFAYAAYYMGR 548 +++A+ L+IL LFLV +T+ +L +D R + + +++ K A ++G Sbjct: 155 VSAAEFLWIL--LFLVMFTWIMGNYL-IRD-SRHFDVTSLKPVETVWSKKLKRTASHLGF 210
Query: 549 SAMIPFSLLWIPVSRGSPFLRLINMPFEHA 638 +I + L++PVSRGS LR +++PFEHA Sbjct: 211 FGLICLNFLFLPVSRGSVLLRALDIPFEHA 240
>tr|A9RKK9|A9RKK9_PHYPA Ferric reductase like transmembrane component OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_115851 PE=4 SV=1 Length = 666
Score = 64.7 bits (156), Expect = 5e-09 Identities = 44/148 (29%), Positives = 74/148 (50%) Frame = +3
Query: 195 VLIYQSAPFIIVALLSLVVVELRKKLNSSSSHETEKGISKSSPSLTTYPLVIKSFMGVLT 374 + + S P I++ +++ + ++++ S + + L T PLV+ F+GVL Sbjct: 1 MFVLYSMPVIVLTIIATAYLAIKQQYPSDLRASWFRRFCRL---LWTRPLVVNEFLGVLN 57
Query: 375 SADVLFILGILFLVAYTFGRQCHLSFQDLEREYKENPSEFDDSLVIIKFAYAAYYMGRSA 554 D+L IL +F+V + + + L NP ++K+ +GR A Sbjct: 58 GFDLLVILSTIFVVLWMVLNELLPQLRSLHG----NPMAG-----LLKWKPIGVVLGRVA 108
Query: 555 MIPFSLLWIPVSRGSPFLRLINMPFEHA 638 ++P SLL IPVSR SP LR I++PFE A Sbjct: 109 VLPISLLLIPVSRSSPILRAIDIPFEQA 136
>tr|A7R0A2|A7R0A2_VITVI Chromosome undetermined scaffold_301, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00011355001 PE=4 SV=1 Length = 735
Score = 60.1 bits (144), Expect = 1e-07 Identities = 41/157 (26%), Positives = 84/157 (53%), Gaps = 4/157 (2%) Frame = +3
Query: 180 GYYGSVLIYQSAPFIIVALLSLVVVELRKKLNSSSSHETEKGISKSSPS--LTTYPLVIK 353 G GS+ + S P +I+A L++V + + + S E ++ + + P L T+P+++ Sbjct: 68 GITGSIFLVFSGPILIIAFLAIVYLVI----SDSGEEELQEKRTSNCPRFRLWTFPVLVD 123
Query: 354 SFMGVLTSADVLFILGILFLVAYTFGRQCHLSFQD--LEREYKENPSEFDDSLVIIKFAY 527 GV+++A+ +GIL + + C + ++ L E+ + PS+ + L++ Sbjct: 124 GPFGVVSAAE---FIGILLFIVFIIWAVCSYTLKNFSLLAEF-QLPSKLECYLML---EL 176
Query: 528 AAYYMGRSAMIPFSLLWIPVSRGSPFLRLINMPFEHA 638 + G + + L++P++RGS LRL+++PFEHA Sbjct: 177 SGLRFGLIGLFCLAFLFLPIARGSVLLRLVDIPFEHA 213
>tr|Q6T303|Q6T303_MEDTR Ferric reductase OS=Medicago truncatula GN=FRO1 PE=2 SV=1 Length = 703
Score = 59.3 bits (142), Expect = 2e-07 Identities = 33/151 (21%), Positives = 76/151 (50%) Frame = +3
Query: 180 GYYGSVLIYQSAPFIIVALLSLVVVELRKKLNSSSSHETEKGISKSSPSLTTYPLVIKSF 359 G G ++ + P +++A L V + + KK ++ S+ E G K ++ P+++K Sbjct: 50 GAQGETILMYTFPVLLIATLGCVYLHIAKKSSNESNIEIRNG-KKHGTTIWNRPMLVKGP 108
Query: 360 MGVLTSADVLFILGILFLVAYTFGRQCHLSFQDLEREYKENPSEFDDSLVIIKFAYAAYY 539 +G+++ ++ F+L + L+ ++F H+ F+ + + +E+ +++ K + Sbjct: 109 LGIVSITEIAFLLMFIALLVWSFTTYLHIGFKTVAK----TAAEYGNTVEQEKLYSVGIW 164
Query: 540 MGRSAMIPFSLLWIPVSRGSPFLRLINMPFE 632 +G I + L+ PV+RGS L + + E Sbjct: 165 LGLVGNICLAFLFFPVTRGSSVLPIFGLTSE 195
>tr|A5C425|A5C425_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_035329 PE=4 SV=1 Length = 694
Score = 58.9 bits (141), Expect = 2e-07 Identities = 41/157 (26%), Positives = 83/157 (52%), Gaps = 4/157 (2%) Frame = +3
Query: 180 GYYGSVLIYQSAPFIIVALLSLVVVELRKKLNSSSSHETEKGISKSSPS--LTTYPLVIK 353 G GS+ + S P +I+A L++V + + + S E ++ + + P L T+P+++ Sbjct: 68 GITGSIFLVFSGPILIIAFLAIVYLVI----SDSGEEELQEKRTSNCPRFRLWTFPVLVD 123
Query: 354 SFMGVLTSADVLFILGILFLVAYTFGRQCHLSFQD--LEREYKENPSEFDDSLVIIKFAY 527 GV+++A+ +GIL + + C + ++ L E+ + PS+ L++ Sbjct: 124 GPFGVVSAAE---FIGILLFIVFIIWAVCSYTLKNFSLLAEF-QLPSKLQCYLML---EL 176
Query: 528 AAYYMGRSAMIPFSLLWIPVSRGSPFLRLINMPFEHA 638 + G + + L++P++RGS LRL+++PFEHA Sbjct: 177 SGLRFGLIGLFCXAFLFLPIARGSVLLRLVDIPFEHA 213
>tr|B8A3B5|B8A3B5_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 760
Score = 58.2 bits (139), Expect = 4e-07 Identities = 44/155 (28%), Positives = 78/155 (50%), Gaps = 2/155 (1%) Frame = +3
Query: 180 GYYGSVLIYQSAPFIIVALLSLVVVELRKKLNSSSSHETEKGISKS-SPSLTTYPLVIKS 356 G G + + SAP +I+ALL+ V + S H EK +S S L T+P+++ Sbjct: 84 GIAGGIFLTFSAPILIIALLAYVYISF-----FPSEHVVEKRKLRSLSFRLWTFPVLVDG 138
Query: 357 FMGVLTSADVLFILGILFLVAYTFGRQCHLSFQDLEREYK-ENPSEFDDSLVIIKFAYAA 533 GV+++ + +GI+ + + + + + + K + PS + L++ Sbjct: 139 PFGVVSAVE---FIGIVLFIVFVVYSMTYYAVEAVSLVSKFDIPSMTESELILDVIGLRL 195
Query: 534 YYMGRSAMIPFSLLWIPVSRGSPFLRLINMPFEHA 638 +G M+ L++PV+RGS LRLI++PFEHA Sbjct: 196 GAVGLFCML---FLFLPVARGSVLLRLIDIPFEHA 227
>tr|B6SW74|B6SW74_MAIZE Ferric reductase-like transmembrane component OS=Zea mays PE=2 SV=1 Length = 760
Score = 57.8 bits (138), Expect = 6e-07 Identities = 44/155 (28%), Positives = 77/155 (49%), Gaps = 2/155 (1%) Frame = +3
Query: 180 GYYGSVLIYQSAPFIIVALLSLVVVELRKKLNSSSSHETEKGISKS-SPSLTTYPLVIKS 356 G G + + SAP +I+ALL+ V + S H EK +S S L T+P+++ Sbjct: 84 GIVGGIFLTFSAPILIIALLAYVYISF-----FPSEHVVEKRKLRSLSFRLWTFPVLVDG 138
Query: 357 FMGVLTSADVLFILGILFLVAYTFGRQCHLSFQDLEREYK-ENPSEFDDSLVIIKFAYAA 533 GV+++ + +GI+ + + + + + K + PS + L++ Sbjct: 139 PFGVVSAVE---FIGIVLFIVFVVYSMTYYAVDAVSLVSKFDIPSMTESELILDVIGLRL 195
Query: 534 YYMGRSAMIPFSLLWIPVSRGSPFLRLINMPFEHA 638 +G M+ L++PV+RGS LRLI++PFEHA Sbjct: 196 GAVGLFCML---FLFLPVARGSVLLRLIDIPFEHA 227
|