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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK957652
Clone id TST39A01NGRL0028_O23
Library
Length 588
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0028_O23. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GGTGAAGGCACGCTCTAACAACGTGAAGCCATGGCGCGCGGTCTCAAGAAACATCTGAAA
CGTCTCAATGCCCCGAGGCACTGGATGCTTGACAAGCTCGGTGGTGCCTTTGCGCCCAAG
CCCTCTGCCGGACCCCATAAGACCAGGGAATGTCTGCCGATGGTTGTCTTGTTGAGGAAT
CGGCTGAAGTATGCCTTGACCTATCGTGAAGTGGTTGCCATTGTGATGCAGCGACTCATC
TCTGTGGATGGGAAAGTAAGGACGGACAAGTGTTACCCTGCTGGGTTTATGGATGTTGTG
TCCATAGCAAAAACCGGAGAGAACTTCCGGTTGCTTTATGATAGCAAAGGAAGATTCACC
TTGCACTCCATAAGCCTTGAAGAGGCTAAGTACAAGCTATGCAAGGTCCGAGCTGCCTGC
TGCGGCGAGAAGGGGATTCCCTACATCACTACATTTGATGGGCGCACCATTCGCTATCCA
GATCCCCTTATCAAGGCCAATGACACCATTAAAATTGAAATTGAGACTGGAAAGGTTGTA
GAGTTCATCAAGTTTGACATTGGCAACATTGTTATGGTTACTGGAGGT
■■Homology search results ■■ -
sp_hit_id Q8VYK6
Definition sp|Q8VYK6|RS43_ARATH 40S ribosomal protein S4-3 OS=Arabidopsis thaliana
Align length 186
Score (bit) 319.0
E-value 6.0e-87
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK957652|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0028_O23, 5'
         (588 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8VYK6|RS43_ARATH 40S ribosomal protein S4-3 OS=Arabidopsis t...   319   6e-87
sp|P46300|RS4_SOLTU 40S ribosomal protein S4 OS=Solanum tuberosu...   319   7e-87
sp|P49204|RS42_ARATH 40S ribosomal protein S4-2 OS=Arabidopsis t...   319   7e-87
sp|Q93VH9|RS41_ARATH 40S ribosomal protein S4-1 OS=Arabidopsis t...   319   7e-87
sp|P46299|RS4_GOSHI 40S ribosomal protein S4 OS=Gossypium hirsut...   317   2e-86
sp|P49398|RS4_ORYSJ 40S ribosomal protein S4 OS=Oryza sativa sub...   317   3e-86
sp|O22424|RS4_MAIZE 40S ribosomal protein S4 OS=Zea mays GN=RPS4...   317   4e-86
sp|O81363|RS4_PRUAR 40S ribosomal protein S4 OS=Prunus armeniaca...   291   2e-78
sp|Q90YS0|RS4_ICTPU 40S ribosomal protein S4 OS=Ictalurus puncta...   287   3e-77
sp|P47961|RS4_CRIGR 40S ribosomal protein S4 OS=Cricetulus grise...   285   2e-76
sp|P79103|RS4_BOVIN 40S ribosomal protein S4 OS=Bos taurus GN=RP...   284   2e-76
sp|P62703|RS4X_RAT 40S ribosomal protein S4, X isoform OS=Rattus...   284   2e-76
sp|P62702|RS4X_MOUSE 40S ribosomal protein S4, X isoform OS=Mus ...   284   2e-76
sp|P62704|RS4X_MESAU 40S ribosomal protein S4, X isoform OS=Meso...   284   2e-76
sp|Q76MY1|RS4X_MACFU 40S ribosomal protein S4, X isoform OS=Maca...   284   2e-76
sp|P62701|RS4X_HUMAN 40S ribosomal protein S4, X isoform OS=Homo...   284   2e-76
sp|P62705|RS4X_FELCA 40S ribosomal protein S4, X isoform OS=Feli...   284   2e-76
sp|Q76N24|RS4X_CERAE 40S ribosomal protein S4, X isoform OS=Cerc...   284   2e-76
sp|Q6PBC4|RS4_XENTR 40S ribosomal protein S4 OS=Xenopus tropical...   283   3e-76
sp|P49401|RS4_XENLA 40S ribosomal protein S4 OS=Xenopus laevis G...   283   5e-76
sp|P47836|RS4_CHICK 40S ribosomal protein S4 OS=Gallus gallus GN...   283   5e-76
sp|Q642H9|RS4X_DANRE 40S ribosomal protein S4, X isoform OS=Dani...   282   1e-75
sp|Q4PMB3|RS4_IXOSC 40S ribosomal protein S4 OS=Ixodes scapulari...   281   1e-75
sp|Q5UAP0|RS4_BOMMO 40S ribosomal protein S4 OS=Bombyx mori GN=R...   280   4e-75
sp|O62739|RS4Y1_MONDO 40S ribosomal protein S4, Y isoform 1 OS=M...   280   5e-75
sp|O62738|RS4X_MONDO 40S ribosomal protein S4, X isoform OS=Mono...   280   5e-75
sp|Q95V34|RS4_SPOFR 40S ribosomal protein S4 OS=Spodoptera frugi...   278   1e-74
sp|Q4GXU6|RS4_CARGR 40S ribosomal protein S4 OS=Carabus granulat...   277   3e-74
sp|Q6GVM7|RS4Y2_PANTR 40S ribosomal protein S4, Y isoform 2 OS=P...   277   3e-74
sp|Q861U9|RS4Y1_PANTR 40S ribosomal protein S4, Y isoform 1 OS=P...   276   4e-74

>sp|Q8VYK6|RS43_ARATH 40S ribosomal protein S4-3 OS=Arabidopsis
           thaliana GN=RPS4D PE=2 SV=2
          Length = 262

 Score =  319 bits (818), Expect = 6e-87
 Identities = 149/186 (80%), Positives = 171/186 (91%)
 Frame = +1

Query: 31  MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSAGPHKTRECLPMVVLLRNRLKYALTYRE 210
           MARGLKKHLKRLNAP+HWMLDKLGGAFAPKPS+GPHK+RECLP+V+++RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60

Query: 211 VVAIVMQRLISVDGKVRTDKCYPAGFMDVVSIAKTGENFRLLYDSKGRFTLHSISLEEAK 390
           V++I+MQR I VDGKVRTDK YPAGFMDVVSI KT ENFRLLYD+KGRF LHSI  EEAK
Sbjct: 61  VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120

Query: 391 YKLCKVRAACCGEKGIPYITTFDGRTIRYPDPLIKANDTIKIEIETGKVVEFIKFDIGNI 570
           +KLCKVR+   G+KGIPY+ T+DGRTIRYPDPLIK NDTIK+++E  K+VEFIKFD+GN+
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEANKIVEFIKFDVGNV 180

Query: 571 VMVTGG 588
           VMVTGG
Sbjct: 181 VMVTGG 186


>sp|P46300|RS4_SOLTU 40S ribosomal protein S4 OS=Solanum tuberosum
           GN=RPS4 PE=2 SV=1
          Length = 264

 Score =  319 bits (817), Expect = 7e-87
 Identities = 146/186 (78%), Positives = 173/186 (93%)
 Frame = +1

Query: 31  MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSAGPHKTRECLPMVVLLRNRLKYALTYRE 210
           MARGLKKHLKRLNAP+HWMLDKLGGAFAPKPS+GPHK+RECLP+V+++RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVIIMRNRLKYALTYRE 60

Query: 211 VVAIVMQRLISVDGKVRTDKCYPAGFMDVVSIAKTGENFRLLYDSKGRFTLHSISLEEAK 390
           V++I+MQR + VDGKVRTDK YPAGFMDVVSI KT ENFRLLYD+KGRF LHS+  EE+K
Sbjct: 61  VISILMQRQVMVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEESK 120

Query: 391 YKLCKVRAACCGEKGIPYITTFDGRTIRYPDPLIKANDTIKIEIETGKVVEFIKFDIGNI 570
           +KLCKVR+   G+KGIPY+ T+DGRTIRYPDPLIKANDTIK+++E+ K+V+FIKFD+GN+
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNV 180

Query: 571 VMVTGG 588
           VMVTGG
Sbjct: 181 VMVTGG 186


>sp|P49204|RS42_ARATH 40S ribosomal protein S4-2 OS=Arabidopsis
           thaliana GN=RPS4B PE=2 SV=4
          Length = 262

 Score =  319 bits (817), Expect = 7e-87
 Identities = 149/186 (80%), Positives = 171/186 (91%)
 Frame = +1

Query: 31  MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSAGPHKTRECLPMVVLLRNRLKYALTYRE 210
           MARGLKKHLKRLNAP+HWMLDKLGGAFAPKPS+GPHK+RECLP+V+++RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60

Query: 211 VVAIVMQRLISVDGKVRTDKCYPAGFMDVVSIAKTGENFRLLYDSKGRFTLHSISLEEAK 390
           V++I+MQR I VDGKVRTDK YPAGFMDVVSI KT ENFRLLYD+KGRF LHSI  EEAK
Sbjct: 61  VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120

Query: 391 YKLCKVRAACCGEKGIPYITTFDGRTIRYPDPLIKANDTIKIEIETGKVVEFIKFDIGNI 570
           +KLCKVR+   G+KGIPY+ T+DGRTIRYPDPLIK NDTIK+++E  K+VEFIKFD+GN+
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNV 180

Query: 571 VMVTGG 588
           VMVTGG
Sbjct: 181 VMVTGG 186


>sp|Q93VH9|RS41_ARATH 40S ribosomal protein S4-1 OS=Arabidopsis
           thaliana GN=RPS4A PE=2 SV=1
          Length = 261

 Score =  319 bits (817), Expect = 7e-87
 Identities = 149/186 (80%), Positives = 171/186 (91%)
 Frame = +1

Query: 31  MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSAGPHKTRECLPMVVLLRNRLKYALTYRE 210
           MARGLKKHLKRLNAP+HWMLDKLGGAFAPKPS+GPHK+RECLP+V+++RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60

Query: 211 VVAIVMQRLISVDGKVRTDKCYPAGFMDVVSIAKTGENFRLLYDSKGRFTLHSISLEEAK 390
           V++I+MQR I VDGKVRTDK YPAGFMDVVSI KT ENFRLLYD+KGRF LHSI  EEAK
Sbjct: 61  VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120

Query: 391 YKLCKVRAACCGEKGIPYITTFDGRTIRYPDPLIKANDTIKIEIETGKVVEFIKFDIGNI 570
           +KLCKVR+   G+KGIPY+ T+DGRTIRYPDPLIK NDTIK+++E  K+VEFIKFD+GN+
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNV 180

Query: 571 VMVTGG 588
           VMVTGG
Sbjct: 181 VMVTGG 186


>sp|P46299|RS4_GOSHI 40S ribosomal protein S4 OS=Gossypium hirsutum
           GN=RPS4 PE=2 SV=1
          Length = 262

 Score =  317 bits (813), Expect = 2e-86
 Identities = 146/186 (78%), Positives = 173/186 (93%)
 Frame = +1

Query: 31  MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSAGPHKTRECLPMVVLLRNRLKYALTYRE 210
           MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPS+GPHK+RECLP++++LRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 211 VVAIVMQRLISVDGKVRTDKCYPAGFMDVVSIAKTGENFRLLYDSKGRFTLHSISLEEAK 390
           V+AI+MQR + VDGKVRTDK YPAGFMDVVSI KT E+FRLLYD+KGRF LH+I+ +E K
Sbjct: 61  VIAILMQRHVMVDGKVRTDKTYPAGFMDVVSIPKTNEDFRLLYDTKGRFCLHAITGDETK 120

Query: 391 YKLCKVRAACCGEKGIPYITTFDGRTIRYPDPLIKANDTIKIEIETGKVVEFIKFDIGNI 570
           +KLCKVR+   G+KGIPY+ T+DGRTIRYPDPLIKANDTIK+++E+ K+V+FIKFD+GN+
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNV 180

Query: 571 VMVTGG 588
           VMVTGG
Sbjct: 181 VMVTGG 186


>sp|P49398|RS4_ORYSJ 40S ribosomal protein S4 OS=Oryza sativa subsp.
           japonica GN=RPS4 PE=2 SV=3
          Length = 265

 Score =  317 bits (812), Expect = 3e-86
 Identities = 144/186 (77%), Positives = 173/186 (93%)
 Frame = +1

Query: 31  MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSAGPHKTRECLPMVVLLRNRLKYALTYRE 210
           MARGLKKHLKRLNAP+HWMLDKLGGAFAPKPS+GPHK+RECLP+++++RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE 60

Query: 211 VVAIVMQRLISVDGKVRTDKCYPAGFMDVVSIAKTGENFRLLYDSKGRFTLHSISLEEAK 390
           V++I+MQR + VDGKVRTDK YPAGFMDV+SI KTGEN+RLLYD+KGRF L S+  E+AK
Sbjct: 61  VISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTGENYRLLYDTKGRFRLQSVKDEDAK 120

Query: 391 YKLCKVRAACCGEKGIPYITTFDGRTIRYPDPLIKANDTIKIEIETGKVVEFIKFDIGNI 570
           +KLCKVR+   G+KGIPY+ T+DGRTIRYPDP+IKANDTIKI++ET K+V+FIKFD+GN+
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPIIKANDTIKIDLETNKIVDFIKFDVGNV 180

Query: 571 VMVTGG 588
           VMVTGG
Sbjct: 181 VMVTGG 186


>sp|O22424|RS4_MAIZE 40S ribosomal protein S4 OS=Zea mays GN=RPS4
           PE=2 SV=1
          Length = 265

 Score =  317 bits (811), Expect = 4e-86
 Identities = 145/186 (77%), Positives = 172/186 (92%)
 Frame = +1

Query: 31  MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSAGPHKTRECLPMVVLLRNRLKYALTYRE 210
           MARGLKKHLKRLNAP+HWMLDKLGGAFAPKPS+GPHK+RECLP+++++RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE 60

Query: 211 VVAIVMQRLISVDGKVRTDKCYPAGFMDVVSIAKTGENFRLLYDSKGRFTLHSISLEEAK 390
           V++I+MQR + VDGKVRTDK YPAGFMDV+SI KT EN+RLLYD+KGRF LH I  E+AK
Sbjct: 61  VISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTNENYRLLYDTKGRFRLHPIRDEDAK 120

Query: 391 YKLCKVRAACCGEKGIPYITTFDGRTIRYPDPLIKANDTIKIEIETGKVVEFIKFDIGNI 570
           +KLCKVR+   G+KGIPY+ T+DGRTIRYPDPLIKANDTIKI++ET K+V+FIKFD+GN+
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNV 180

Query: 571 VMVTGG 588
           VMVTGG
Sbjct: 181 VMVTGG 186


>sp|O81363|RS4_PRUAR 40S ribosomal protein S4 OS=Prunus armeniaca
           GN=RPS4 PE=2 SV=1
          Length = 261

 Score =  291 bits (745), Expect = 2e-78
 Identities = 139/186 (74%), Positives = 163/186 (87%)
 Frame = +1

Query: 31  MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSAGPHKTRECLPMVVLLRNRLKYALTYRE 210
           MARGLKKHLKRLNAP+HWMLDKLGGAFAPKPS+GPHK+RECLP++++LRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 211 VVAIVMQRLISVDGKVRTDKCYPAGFMDVVSIAKTGENFRLLYDSKGRFTLHSISLEEAK 390
           VV+I+MQR I VDGK+     +     DVVSI KT ENFRLLYD+KGRF LHSI  EE+K
Sbjct: 61  VVSILMQRHILVDGKIH----FCIRLSDVVSIPKTNENFRLLYDTKGRFRLHSIRDEESK 116

Query: 391 YKLCKVRAACCGEKGIPYITTFDGRTIRYPDPLIKANDTIKIEIETGKVVEFIKFDIGNI 570
           +KLCKVR+   G+KGIPYI T+DGRTIRYPDPLIKANDTIK+++ET K+ +FIKFD+GN+
Sbjct: 117 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITDFIKFDVGNV 176

Query: 571 VMVTGG 588
           VMVTGG
Sbjct: 177 VMVTGG 182


>sp|Q90YS0|RS4_ICTPU 40S ribosomal protein S4 OS=Ictalurus punctatus
           GN=rps4 PE=2 SV=3
          Length = 263

 Score =  287 bits (734), Expect = 3e-77
 Identities = 135/186 (72%), Positives = 155/186 (83%)
 Frame = +1

Query: 31  MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSAGPHKTRECLPMVVLLRNRLKYALTYRE 210
           MARG KKHLKR+ AP+HWMLDKL G FAP+PS GPHK RECLP+++ LRNRLKYALT  E
Sbjct: 1   MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60

Query: 211 VVAIVMQRLISVDGKVRTDKCYPAGFMDVVSIAKTGENFRLLYDSKGRFTLHSISLEEAK 390
           V  I MQR I VDGKVRTD  YPAGFMDV+SI KTGENFRL+YD KGRFT+H I+ EEAK
Sbjct: 61  VKKICMQRFIKVDGKVRTDITYPAGFMDVISIEKTGENFRLIYDVKGRFTVHRITNEEAK 120

Query: 391 YKLCKVRAACCGEKGIPYITTFDGRTIRYPDPLIKANDTIKIEIETGKVVEFIKFDIGNI 570
           YKLCKV+    G KGIP++ T D RTIRYPDP+IKANDT++I++ETGK+ EFIKFD GN+
Sbjct: 121 YKLCKVKKILIGTKGIPHLVTHDARTIRYPDPMIKANDTVRIDLETGKITEFIKFDTGNL 180

Query: 571 VMVTGG 588
            MVTGG
Sbjct: 181 CMVTGG 186


>sp|P47961|RS4_CRIGR 40S ribosomal protein S4 OS=Cricetulus griseus
           GN=RPS4 PE=2 SV=2
          Length = 263

 Score =  285 bits (728), Expect = 2e-76
 Identities = 134/186 (72%), Positives = 154/186 (82%)
 Frame = +1

Query: 31  MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSAGPHKTRECLPMVVLLRNRLKYALTYRE 210
           MARG KKHLKR+ AP+HWMLDKL G FAP+PS GPHK RECLP+++ LRNRLKYALT  E
Sbjct: 1   MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60

Query: 211 VVAIVMQRLISVDGKVRTDKCYPAGFMDVVSIAKTGENFRLLYDSKGRFTLHSISLEEAK 390
           V  I MQR I +DGKVRTD  YPAGFMDV+SI KTGENFRL+YD+KGRF +H I+ EEAK
Sbjct: 61  VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITSEEAK 120

Query: 391 YKLCKVRAACCGEKGIPYITTFDGRTIRYPDPLIKANDTIKIEIETGKVVEFIKFDIGNI 570
           YKLCKVR    G KGIP++ T D RTIRYPDPLIK NDTI+I++ETGK+ +FIKFD GN+
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180

Query: 571 VMVTGG 588
            MVTGG
Sbjct: 181 CMVTGG 186
tr_hit_id A9S0Q0
Definition tr|A9S0Q0|A9S0Q0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 186
Score (bit) 350.0
E-value 3.0e-95
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK957652|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0028_O23, 5'
         (588 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9S0Q0|A9S0Q0_PHYPA Predicted protein OS=Physcomitrella paten...   350   3e-95
tr|A9TPQ8|A9TPQ8_PHYPA Predicted protein OS=Physcomitrella paten...   348   1e-94
tr|A9RZU4|A9RZU4_PHYPA Predicted protein OS=Physcomitrella paten...   348   1e-94
tr|A9RCK9|A9RCK9_PHYPA Predicted protein OS=Physcomitrella paten...   348   1e-94
tr|A9U397|A9U397_PHYPA Predicted protein OS=Physcomitrella paten...   347   2e-94
tr|A9SIE0|A9SIE0_PHYPA Predicted protein OS=Physcomitrella paten...   346   5e-94
tr|A9NKK9|A9NKK9_PICSI Putative uncharacterized protein OS=Picea...   338   2e-91
tr|A9NNW1|A9NNW1_PICSI Putative uncharacterized protein OS=Picea...   337   3e-91
tr|A3B3A9|A3B3A9_ORYSJ Putative uncharacterized protein OS=Oryza...   322   1e-86
tr|Q0DIR7|Q0DIR7_ORYSJ Os05g0368300 protein OS=Oryza sativa subs...   321   2e-86
tr|B3TM21|B3TM21_ELAGV 40S ribosomal protein S4 OS=Elaeis guinee...   320   3e-86
tr|B3TM23|B3TM23_ELAGV 40S ribosomal protein S4 OS=Elaeis guinee...   320   4e-86
tr|A2Y3W4|A2Y3W4_ORYSI Putative uncharacterized protein OS=Oryza...   320   4e-86
tr|Q2XPX5|Q2XPX5_SOLTU 40S ribosomal protein S4-like protein OS=...   319   8e-86
tr|Q5ZBX1|Q5ZBX1_ORYSJ cDNA clone:001-040-C06, full insert seque...   318   2e-85
tr|A2WPV4|A2WPV4_ORYSI Putative uncharacterized protein OS=Oryza...   318   2e-85
tr|Q8LJW0|Q8LJW0_SOYBN 40S ribosomal S4 protein OS=Glycine max P...   317   2e-85
tr|Q0E4Q0|Q0E4Q0_ORYSJ 40S ribosomal protein S4 OS=Oryza sativa ...   317   3e-85
tr|A2WZV1|A2WZV1_ORYSI Putative uncharacterized protein OS=Oryza...   317   3e-85
tr|Q6L5M3|Q6L5M3_BROIN Ribosomal protein OS=Bromus inermis GN=Bi...   317   4e-85
tr|B4FMI5|B4FMI5_MAIZE 40S ribosomal protein S4 OS=Zea mays PE=2...   317   4e-85
tr|Q401B8|Q401B8_PANGI Ribosomal protein S4 OS=Panax ginseng PE=...   316   5e-85
tr|B7FL29|B7FL29_MEDTR Putative uncharacterized protein OS=Medic...   314   2e-84
tr|Q6QU83|Q6QU83_MAIZE Ribosomal protein S4 OS=Zea mays GN=rps4 ...   314   3e-84
tr|O22453|O22453_MAIZE 40S ribosomal protein S4 OS=Zea mays GN=r...   312   8e-84
tr|A9P7U7|A9P7U7_POPTR Putative uncharacterized protein OS=Popul...   312   1e-83
tr|A9PD40|A9PD40_POPTR Putative uncharacterized protein OS=Popul...   311   2e-83
tr|A8UEI0|A8UEI0_AREMA Ribosomal protein rps4 (Fragment) OS=Aren...   291   2e-77
tr|B2YI06|B2YI06_9BILA Putative 40S ribosomal protein RPS4 (Frag...   289   9e-77
tr|Q3UXQ6|Q3UXQ6_MOUSE Putative uncharacterized protein OS=Mus m...   285   2e-75

>tr|A9S0Q0|A9S0Q0_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_180098 PE=4 SV=1
          Length = 263

 Score =  350 bits (899), Expect = 3e-95
 Identities = 168/186 (90%), Positives = 179/186 (96%)
 Frame = +1

Query: 31  MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSAGPHKTRECLPMVVLLRNRLKYALTYRE 210
           MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPS GPHK RECLP+VV+LRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSPGPHKERECLPLVVMLRNRLKYALTYRE 60

Query: 211 VVAIVMQRLISVDGKVRTDKCYPAGFMDVVSIAKTGENFRLLYDSKGRFTLHSISLEEAK 390
           VVAIVMQRLIS+DGKVRTDKCYPAGFMDV+SIAKT ENFRLLYD+KGRFTLH+IS EEAK
Sbjct: 61  VVAIVMQRLISIDGKVRTDKCYPAGFMDVISIAKTNENFRLLYDNKGRFTLHNISAEEAK 120

Query: 391 YKLCKVRAACCGEKGIPYITTFDGRTIRYPDPLIKANDTIKIEIETGKVVEFIKFDIGNI 570
           YKLCKVR+A  G+KG+PYITTFDGRTIRYPDPLIKANDT+KI +ETGKVVEFIKFDIGNI
Sbjct: 121 YKLCKVRSAQFGDKGVPYITTFDGRTIRYPDPLIKANDTVKINLETGKVVEFIKFDIGNI 180

Query: 571 VMVTGG 588
           VMVTGG
Sbjct: 181 VMVTGG 186


>tr|A9TPQ8|A9TPQ8_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_197071 PE=4 SV=1
          Length = 263

 Score =  348 bits (894), Expect = 1e-94
 Identities = 167/186 (89%), Positives = 178/186 (95%)
 Frame = +1

Query: 31  MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSAGPHKTRECLPMVVLLRNRLKYALTYRE 210
           MARGLKKHLKRLNAP+HWMLDKLGGAFAPKPS GPHK RECLP+VV+LRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSPGPHKERECLPLVVMLRNRLKYALTYRE 60

Query: 211 VVAIVMQRLISVDGKVRTDKCYPAGFMDVVSIAKTGENFRLLYDSKGRFTLHSISLEEAK 390
           VVAIVMQRLIS+DGKVRTDKCYPAGFMDV+SIAKT ENFRLLYD+KGRFTLH IS EEAK
Sbjct: 61  VVAIVMQRLISIDGKVRTDKCYPAGFMDVISIAKTNENFRLLYDNKGRFTLHHISAEEAK 120

Query: 391 YKLCKVRAACCGEKGIPYITTFDGRTIRYPDPLIKANDTIKIEIETGKVVEFIKFDIGNI 570
           YKLCKVR+A  G+KG+PYITTFDGRTIRYPDPLIKANDT+KI +ETGKVVEFIKFDIGNI
Sbjct: 121 YKLCKVRSAQFGDKGVPYITTFDGRTIRYPDPLIKANDTVKINLETGKVVEFIKFDIGNI 180

Query: 571 VMVTGG 588
           VMVTGG
Sbjct: 181 VMVTGG 186


>tr|A9RZU4|A9RZU4_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_207291 PE=4 SV=1
          Length = 263

 Score =  348 bits (894), Expect = 1e-94
 Identities = 167/186 (89%), Positives = 179/186 (96%)
 Frame = +1

Query: 31  MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSAGPHKTRECLPMVVLLRNRLKYALTYRE 210
           MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPS GPHK RECLP+VV+LRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSPGPHKERECLPLVVMLRNRLKYALTYRE 60

Query: 211 VVAIVMQRLISVDGKVRTDKCYPAGFMDVVSIAKTGENFRLLYDSKGRFTLHSISLEEAK 390
           VVAIVMQRLIS+DGKVRTDKCYPAGFMDV+SIAKT ENFRLLYD+KGRFTLH+IS EEAK
Sbjct: 61  VVAIVMQRLISIDGKVRTDKCYPAGFMDVISIAKTNENFRLLYDNKGRFTLHNISAEEAK 120

Query: 391 YKLCKVRAACCGEKGIPYITTFDGRTIRYPDPLIKANDTIKIEIETGKVVEFIKFDIGNI 570
           YKLCKVR+A  G+KG+P+ITTFDGRTIRYPDPLIKANDT+KI +ETGKVVEFIKFDIGNI
Sbjct: 121 YKLCKVRSAQFGDKGVPHITTFDGRTIRYPDPLIKANDTVKINLETGKVVEFIKFDIGNI 180

Query: 571 VMVTGG 588
           VMVTGG
Sbjct: 181 VMVTGG 186


>tr|A9RCK9|A9RCK9_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_64135 PE=4 SV=1
          Length = 263

 Score =  348 bits (894), Expect = 1e-94
 Identities = 167/186 (89%), Positives = 179/186 (96%)
 Frame = +1

Query: 31  MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSAGPHKTRECLPMVVLLRNRLKYALTYRE 210
           MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPS GPHK RECLP+VV+LRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSPGPHKERECLPLVVMLRNRLKYALTYRE 60

Query: 211 VVAIVMQRLISVDGKVRTDKCYPAGFMDVVSIAKTGENFRLLYDSKGRFTLHSISLEEAK 390
           VVAIVMQRLIS+DGKVRTDKCYPAGFMDV+SIAKT ENFRLLYD+KGRFTLH+IS EEAK
Sbjct: 61  VVAIVMQRLISIDGKVRTDKCYPAGFMDVISIAKTNENFRLLYDNKGRFTLHNISAEEAK 120

Query: 391 YKLCKVRAACCGEKGIPYITTFDGRTIRYPDPLIKANDTIKIEIETGKVVEFIKFDIGNI 570
           YKLCKVR+A  G+KG+P+ITTFDGRTIRYPDPLIKANDT+KI +ETGKVVEFIKFDIGNI
Sbjct: 121 YKLCKVRSAQFGDKGVPHITTFDGRTIRYPDPLIKANDTVKINLETGKVVEFIKFDIGNI 180

Query: 571 VMVTGG 588
           VMVTGG
Sbjct: 181 VMVTGG 186


>tr|A9U397|A9U397_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_227948 PE=4 SV=1
          Length = 263

 Score =  347 bits (891), Expect = 2e-94
 Identities = 166/186 (89%), Positives = 178/186 (95%)
 Frame = +1

Query: 31  MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSAGPHKTRECLPMVVLLRNRLKYALTYRE 210
           MARGLKKHLKRLNAP+HWMLDKLGGAFAPKPS GPHK RECLP+VV+LRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSPGPHKERECLPLVVMLRNRLKYALTYRE 60

Query: 211 VVAIVMQRLISVDGKVRTDKCYPAGFMDVVSIAKTGENFRLLYDSKGRFTLHSISLEEAK 390
           VVAIVMQRLIS+DGKVRTDKCYPAGFMDV+SIAKT ENFRLLYD+KGRFTLH IS EEAK
Sbjct: 61  VVAIVMQRLISIDGKVRTDKCYPAGFMDVISIAKTNENFRLLYDNKGRFTLHHISAEEAK 120

Query: 391 YKLCKVRAACCGEKGIPYITTFDGRTIRYPDPLIKANDTIKIEIETGKVVEFIKFDIGNI 570
           YKLCKVRAA  G+KG+P++TTFDGRTIRYPDPLIKANDT+KI +ETGKVVEFIKFDIGNI
Sbjct: 121 YKLCKVRAAQFGDKGVPHVTTFDGRTIRYPDPLIKANDTVKINLETGKVVEFIKFDIGNI 180

Query: 571 VMVTGG 588
           VMVTGG
Sbjct: 181 VMVTGG 186


>tr|A9SIE0|A9SIE0_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_185262 PE=4 SV=1
          Length = 308

 Score =  346 bits (888), Expect = 5e-94
 Identities = 165/186 (88%), Positives = 178/186 (95%)
 Frame = +1

Query: 31  MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSAGPHKTRECLPMVVLLRNRLKYALTYRE 210
           MARGLKKHLKRLNAP+HWMLDKLGGAFAPKPS GPHK RECLP+VV+LRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSPGPHKERECLPLVVMLRNRLKYALTYRE 60

Query: 211 VVAIVMQRLISVDGKVRTDKCYPAGFMDVVSIAKTGENFRLLYDSKGRFTLHSISLEEAK 390
           VVAIVMQRLIS+DGKVRTDKCYPAGFMDV+SIAKT ENFRLLYD+KGRFTLH IS EEAK
Sbjct: 61  VVAIVMQRLISIDGKVRTDKCYPAGFMDVISIAKTNENFRLLYDNKGRFTLHHISAEEAK 120

Query: 391 YKLCKVRAACCGEKGIPYITTFDGRTIRYPDPLIKANDTIKIEIETGKVVEFIKFDIGNI 570
           YKLCKVR+A  G+KG+P+ITTFDGRTIRYPDPLIKANDT+KI +ETGKVVEFIKFD+GNI
Sbjct: 121 YKLCKVRSAQFGDKGVPHITTFDGRTIRYPDPLIKANDTVKINLETGKVVEFIKFDVGNI 180

Query: 571 VMVTGG 588
           VMVTGG
Sbjct: 181 VMVTGG 186


>tr|A9NKK9|A9NKK9_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 263

 Score =  338 bits (866), Expect = 2e-91
 Identities = 160/186 (86%), Positives = 175/186 (94%)
 Frame = +1

Query: 31  MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSAGPHKTRECLPMVVLLRNRLKYALTYRE 210
           MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPS GPHK RECLP+VVL+RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSPGPHKGRECLPLVVLIRNRLKYALTYRE 60

Query: 211 VVAIVMQRLISVDGKVRTDKCYPAGFMDVVSIAKTGENFRLLYDSKGRFTLHSISLEEAK 390
           V+AIVMQRLISVDGKVRTDKCYPAGFMDV+SIAKT ENFRLLYD+KGRF LHSI  EEAK
Sbjct: 61  VIAIVMQRLISVDGKVRTDKCYPAGFMDVLSIAKTNENFRLLYDAKGRFRLHSIKDEEAK 120

Query: 391 YKLCKVRAACCGEKGIPYITTFDGRTIRYPDPLIKANDTIKIEIETGKVVEFIKFDIGNI 570
           YKLCKVR+   G+KGIPY+ T+DGRTIRYPDPL+KANDTIKI++ETGK+ EFIKFD+GN+
Sbjct: 121 YKLCKVRSVQFGDKGIPYLNTYDGRTIRYPDPLVKANDTIKIDLETGKIKEFIKFDVGNV 180

Query: 571 VMVTGG 588
           VMVTGG
Sbjct: 181 VMVTGG 186


>tr|A9NNW1|A9NNW1_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 263

 Score =  337 bits (864), Expect = 3e-91
 Identities = 158/186 (84%), Positives = 175/186 (94%)
 Frame = +1

Query: 31  MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSAGPHKTRECLPMVVLLRNRLKYALTYRE 210
           MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPS GPHK RECLP+VVL+RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSPGPHKGRECLPLVVLIRNRLKYALTYRE 60

Query: 211 VVAIVMQRLISVDGKVRTDKCYPAGFMDVVSIAKTGENFRLLYDSKGRFTLHSISLEEAK 390
           V+AIVMQRLISVDGKVRTDKCYPAGFMDV+SIAKT ENFRLLYD+KGRF LHSI  EEAK
Sbjct: 61  VIAIVMQRLISVDGKVRTDKCYPAGFMDVLSIAKTNENFRLLYDAKGRFRLHSIKDEEAK 120

Query: 391 YKLCKVRAACCGEKGIPYITTFDGRTIRYPDPLIKANDTIKIEIETGKVVEFIKFDIGNI 570
           YKLCKVR+   G+KGIPY+ T+DGRTIRYPDPL+KANDTIK+++ETGK+ EFIKFD+GN+
Sbjct: 121 YKLCKVRSVQFGDKGIPYLNTYDGRTIRYPDPLVKANDTIKVDLETGKIKEFIKFDVGNV 180

Query: 571 VMVTGG 588
           +MVTGG
Sbjct: 181 IMVTGG 186


>tr|A3B3A9|A3B3A9_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_017531 PE=4 SV=1
          Length = 398

 Score =  322 bits (824), Expect = 1e-86
 Identities = 152/190 (80%), Positives = 173/190 (91%)
 Frame = +1

Query: 19  QREAMARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSAGPHKTRECLPMVVLLRNRLKYAL 198
           QR   ARGLKKHLKRLNAP HWMLDKLGGAFAPKPS+GPHK RECLP++++LRNRLKYAL
Sbjct: 132 QRSFWARGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYAL 191

Query: 199 TYREVVAIVMQRLISVDGKVRTDKCYPAGFMDVVSIAKTGENFRLLYDSKGRFTLHSISL 378
           TYREV++I+MQR + VDGKVRTDK YPAGFMDVVSIAKTGENFRLLYD+KGRF LHSI  
Sbjct: 192 TYREVISILMQRHVMVDGKVRTDKTYPAGFMDVVSIAKTGENFRLLYDTKGRFRLHSIKD 251

Query: 379 EEAKYKLCKVRAACCGEKGIPYITTFDGRTIRYPDPLIKANDTIKIEIETGKVVEFIKFD 558
           E+AK+KLCKVR+   G+KGIP++ T DGRTIRYPDPLIKANDTIKI++ET K+V+FIKFD
Sbjct: 252 EDAKFKLCKVRSVQFGQKGIPFLNTNDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFD 311

Query: 559 IGNIVMVTGG 588
           +GNIVMVTGG
Sbjct: 312 VGNIVMVTGG 321


>tr|Q0DIR7|Q0DIR7_ORYSJ Os05g0368300 protein OS=Oryza sativa subsp.
           japonica GN=Os05g0368300 PE=4 SV=1
          Length = 263

 Score =  321 bits (822), Expect = 2e-86
 Identities = 151/186 (81%), Positives = 172/186 (92%)
 Frame = +1

Query: 31  MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSAGPHKTRECLPMVVLLRNRLKYALTYRE 210
           MARGLKKHLKRLNAP HWMLDKLGGAFAPKPS+GPHK RECLP++++LRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYRE 60

Query: 211 VVAIVMQRLISVDGKVRTDKCYPAGFMDVVSIAKTGENFRLLYDSKGRFTLHSISLEEAK 390
           V++I+MQR + VDGKVRTDK YPAGFMDVVSIAKTGENFRLLYD+KGRF LHSI  E+AK
Sbjct: 61  VISILMQRHVMVDGKVRTDKTYPAGFMDVVSIAKTGENFRLLYDTKGRFRLHSIKDEDAK 120

Query: 391 YKLCKVRAACCGEKGIPYITTFDGRTIRYPDPLIKANDTIKIEIETGKVVEFIKFDIGNI 570
           +KLCKVR+   G+KGIP++ T DGRTIRYPDPLIKANDTIKI++ET K+V+FIKFD+GNI
Sbjct: 121 FKLCKVRSVQFGQKGIPFLNTNDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNI 180

Query: 571 VMVTGG 588
           VMVTGG
Sbjct: 181 VMVTGG 186