| DK957673 |
| Clone id |
TST39A01NGRL0028_P20 |
| Library |
TST39 |
| Length |
665 |
| Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0028_P20. 5' end sequence. |
| Accession |
DK957673 |
| Tissue type |
prothallia with plantlets |
| Developmental stage |
gametophytes with sporophytes |
| Contig ID |
CL1260Contig1 |
| Sequence |
CGATCTGCGTCTGCGTCGCGGCAACCCTGTCTCGTCTTCCTTTCTCTTCTTTCCTTGAGC
TCTGGTTACTGGGCTGTCATGGCGGTCAGAGCTGCTCGCCGCCTGATACGCTCCTCCAAC
TTTTCTCCCGTGAAATCTCAACACCAGCAGTTGCGGCATCTCAACATCCACGAGTATCAG
GGGAGCAAACTGATGAGTCAGTACGGTGTTAATGTACCCAAAGGTGTTGCCGTGTCTTCA
ATTTCAGAGATAAAAAACGTATTGGAACAAACCTTTCCAGGAGAGGAGGAGGTGGTTGTG
AAGAGTCAAATTCTTGCTGGTGGTCGGGGCTTGGGTACATTCAAGAACGGGTTTAAAGGC
GGTGTTCATGTTGTGAAAAGGAACGATGTTGAGACTATTGCAGAGAAGATGCTTGGACAA
GTTCTTGTGACAAAGCAAAGTGGACCAGATGGAAAGCCTGTGAATCAGGTTTATTTATGT
GAAAAACTCTCTCTTGTCAATGAGATGTACTTTGCCATTGCTCTTGATCGTGCCAGTGCT
GGACCTGTAATAATTGCTTGTAGTAAAGGTGGAACAAGCATCGAAGATCTGGCAGAGAAG
TATCCAGACATGATAATAAAGGTTCCTGTGGATATATGGACTGGTATAACAGATAAAGAG
GCTGC |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
O82662 |
| Definition |
sp|O82662|SUCB_ARATH Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial OS=Arabidopsis thaliana |
| Align length |
177 |
| Score (bit) |
275.0 |
| E-value |
2.0e-73 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK957673|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0028_P20, 5'
(665 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|O82662|SUCB_ARATH Succinyl-CoA ligase [GDP-forming] subunit b... 275 2e-73
sp|Q6K9N6|SUCB_ORYSJ Succinyl-CoA ligase [GDP-forming] subunit b... 275 2e-73
sp|Q9P2R7|SUCB1_HUMAN Succinyl-CoA ligase [ADP-forming] subunit ... 155 2e-37
sp|Q55AI5|SUCB1_DICDI Succinyl-CoA ligase [ADP-forming] subunit ... 155 2e-37
sp|Q9Z2I9|SUCB1_MOUSE Succinyl-CoA ligase [ADP-forming] subunit ... 154 5e-37
sp|Q9P567|SUCB_NEUCR Probable succinyl-CoA ligase [GDP-forming] ... 153 9e-37
sp|Q4R517|SUCB1_MACFA Succinyl-CoA ligase [ADP-forming] subunit ... 152 2e-36
sp|O97580|SUCB1_PIG Succinyl-CoA ligase [ADP-forming] subunit be... 150 4e-36
sp|Q869S7|SUCB2_DICDI Succinyl-CoA ligase [GDP-forming] subunit ... 144 3e-34
sp|P53587|SUCB_NEOFR Succinyl-CoA ligase [GDP-forming] subunit b... 143 7e-34
sp|P53590|SUCB2_PIG Succinyl-CoA ligase [GDP-forming] subunit be... 138 3e-32
sp|Q9Z2I8|SUCB2_MOUSE Succinyl-CoA ligase [GDP-forming] subunit ... 138 3e-32
sp|Q96I99|SUCB2_HUMAN Succinyl-CoA ligase [GDP-forming] subunit ... 138 3e-32
sp|Q3MHX5|SUCB2_BOVIN Succinyl-CoA ligase [GDP-forming] subunit ... 132 2e-30
sp|P53312|SUCB_YEAST Succinyl-CoA ligase [ADP-forming] subunit b... 131 3e-30
sp|P53588|SUCB1_CAEEL Probable succinyl-CoA ligase [ADP-forming]... 130 5e-30
sp|Q2W063|SUCC_MAGMM Succinyl-CoA ligase [ADP-forming] subunit b... 129 1e-29
sp|A6WXE8|SUCC_OCHA4 Succinyl-CoA ligase [ADP-forming] subunit b... 128 2e-29
sp|P53589|SUCB2_CAEEL Probable succinyl-CoA ligase [GDP-forming]... 126 9e-29
sp|P66868|SUCC_BRUSU Succinyl-CoA ligase [ADP-forming] subunit b... 126 1e-28
sp|B0CIT0|SUCC_BRUSI Succinyl-CoA ligase [ADP-forming] subunit b... 126 1e-28
sp|A5VSQ3|SUCC_BRUO2 Succinyl-CoA ligase [ADP-forming] subunit b... 126 1e-28
sp|P66867|SUCC_BRUME Succinyl-CoA ligase [ADP-forming] subunit b... 126 1e-28
sp|A9M8R2|SUCC_BRUC2 Succinyl-CoA ligase [ADP-forming] subunit b... 126 1e-28
sp|Q57AX2|SUCC_BRUAB Succinyl-CoA ligase [ADP-forming] subunit b... 126 1e-28
sp|Q8KFE7|SUCC_CHLTE Succinyl-CoA ligase [ADP-forming] subunit b... 125 3e-28
sp|O94415|SUCB_SCHPO Probable succinyl-CoA ligase [GDP-forming] ... 124 4e-28
sp|Q3B5J6|SUCC_PELLD Succinyl-CoA ligase [ADP-forming] subunit b... 124 6e-28
sp|Q6FYD1|SUCC_BARQU Succinyl-CoA ligase [ADP-forming] subunit b... 122 1e-27
sp|Q07UX6|SUCC_RHOP5 Succinyl-CoA ligase [ADP-forming] subunit b... 122 2e-27
>sp|O82662|SUCB_ARATH Succinyl-CoA ligase [GDP-forming] subunit
beta, mitochondrial OS=Arabidopsis thaliana GN=At2g20420
PE=1 SV=1
Length = 421
Score = 275 bits (703), Expect = 2e-73
Identities = 132/177 (74%), Positives = 156/177 (88%)
Frame = +1
Query: 133 KSQHQQLRHLNIHEYQGSKLMSQYGVNVPKGVAVSSISEIKNVLEQTFPGEEEVVVKSQI 312
K Q+QQLR LNIHEYQG++LM +YGVNVPKGVA SS+ E+K ++ FP E E+VVKSQI
Sbjct: 18 KWQNQQLRRLNIHEYQGAELMGKYGVNVPKGVAASSLEEVKKAIQDVFPNESELVVKSQI 77
Query: 313 LAGGRGLGTFKNGFKGGVHVVKRNDVETIAEKMLGQVLVTKQSGPDGKPVNQVYLCEKLS 492
LAGGRGLGTFK+G KGGVH+VKR++ E IA KMLGQVLVTKQ+GP GK V++VYLCEKLS
Sbjct: 78 LAGGRGLGTFKSGLKGGVHIVKRDEAEEIAGKMLGQVLVTKQTGPQGKVVSKVYLCEKLS 137
Query: 493 LVNEMYFAIALDRASAGPVIIACSKGGTSIEDLAEKYPDMIIKVPVDIWTGITDKEA 663
LVNEMYF+I LDR SAGP+IIAC KGGTSIEDLAEK+PDMIIKVP+D++ GITD++A
Sbjct: 138 LVNEMYFSIILDRKSAGPLIIACKKGGTSIEDLAEKFPDMIIKVPIDVFAGITDEDA 194
>sp|Q6K9N6|SUCB_ORYSJ Succinyl-CoA ligase [GDP-forming] subunit
beta, mitochondrial OS=Oryza sativa subsp. japonica
GN=Os02g0621700 PE=1 SV=1
Length = 422
Score = 275 bits (702), Expect = 2e-73
Identities = 129/177 (72%), Positives = 155/177 (87%)
Frame = +1
Query: 133 KSQHQQLRHLNIHEYQGSKLMSQYGVNVPKGVAVSSISEIKNVLEQTFPGEEEVVVKSQI 312
K QHQQLR LNIHEYQG++LM +YG+NVP+G A S+ E+KN L+ FP E+E+VVKSQI
Sbjct: 19 KWQHQQLRRLNIHEYQGAELMGKYGINVPRGAAAGSVEEVKNTLKNVFPSEKEIVVKSQI 78
Query: 313 LAGGRGLGTFKNGFKGGVHVVKRNDVETIAEKMLGQVLVTKQSGPDGKPVNQVYLCEKLS 492
LAGGRGLGTFK+G +GGVH+VK + E++A KMLGQ+LVTKQ+GP GK V++VYLCEKLS
Sbjct: 79 LAGGRGLGTFKSGLQGGVHIVKAEEAESLAAKMLGQILVTKQTGPQGKIVSKVYLCEKLS 138
Query: 493 LVNEMYFAIALDRASAGPVIIACSKGGTSIEDLAEKYPDMIIKVPVDIWTGITDKEA 663
LVNEMYFAI LDR +AGP+IIACSKGGTSIEDLAEKYPDMIIKVP+D++ GITD +A
Sbjct: 139 LVNEMYFAITLDRNTAGPLIIACSKGGTSIEDLAEKYPDMIIKVPIDVFKGITDDDA 195
>sp|Q9P2R7|SUCB1_HUMAN Succinyl-CoA ligase [ADP-forming] subunit
beta, mitochondrial OS=Homo sapiens GN=SUCLA2 PE=1 SV=3
Length = 463
Score = 155 bits (392), Expect = 2e-37
Identities = 84/198 (42%), Positives = 129/198 (65%), Gaps = 4/198 (2%)
Frame = +1
Query: 82 AVRAARRLIRSS---NFSPVKSQHQQLRHLNIHEYQGSKLMSQYGVNVPKGVAVSSISEI 252
A RAA +++ SS N ++ Q QQ R+L++HEY +L+ + GV+VPKG S E
Sbjct: 24 AQRAAAQVLGSSGLFNNHGLQVQQQQQRNLSLHEYMSMELLQEAGVSVPKGYVAKSPDEA 83
Query: 253 KNVLEQTFPGEEEVVVKSQILAGGRGLGTFKNGFKGGVHVV-KRNDVETIAEKMLGQVLV 429
+ ++ G ++VV+K+Q+LAGGRG GTF++G KGGV +V + + ++ +M+G+ L
Sbjct: 84 YAIAKKL--GSKDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLF 141
Query: 430 TKQSGPDGKPVNQVYLCEKLSLVNEMYFAIALDRASAGPVIIACSKGGTSIEDLAEKYPD 609
TKQ+G G+ NQV +CE+ E YFAI ++R+ GPV+I S GG +IED+A + P+
Sbjct: 142 TKQTGEKGRICNQVLVCERKYPRREYYFAITMERSFQGPVLIGSSHGGVNIEDVAAESPE 201
Query: 610 MIIKVPVDIWTGITDKEA 663
IIK P+DI GI ++A
Sbjct: 202 AIIKEPIDIEEGIKKEQA 219
>sp|Q55AI5|SUCB1_DICDI Succinyl-CoA ligase [ADP-forming] subunit
beta, mitochondrial OS=Dictyostelium discoideum GN=scsC
PE=3 SV=1
Length = 445
Score = 155 bits (392), Expect = 2e-37
Identities = 80/172 (46%), Positives = 108/172 (62%), Gaps = 1/172 (0%)
Frame = +1
Query: 148 QLRHLNIHEYQGSKLMSQYGVNVPKGVAVSSISEIKNVLEQTFPGEEEVVVKSQILAGGR 327
Q R LN+HEYQ K+M YG+N P G + E + + E +++VVK+Q+LAGGR
Sbjct: 31 QKRFLNVHEYQAQKMMKSYGINCPVGNVAETPEEAEKIAEVM--NTQDLVVKAQVLAGGR 88
Query: 328 GLGTFKNGFKGGVHVVKR-NDVETIAEKMLGQVLVTKQSGPDGKPVNQVYLCEKLSLVNE 504
G G F +G KGGV + DV+ A KMLG LVTKQ+G DGK V+QVY+ E+ L E
Sbjct: 89 GKGIFTSGLKGGVQLCSSAEDVKKFASKMLGHTLVTKQTGEDGKVVHQVYVTERHFLRKE 148
Query: 505 MYFAIALDRASAGPVIIACSKGGTSIEDLAEKYPDMIIKVPVDIWTGITDKE 660
MYFAI +DR + GPV++A +GG IE +A P I K P+DI G+ ++
Sbjct: 149 MYFAILMDRKAGGPVMVASPEGGVDIEGVARDNPSAIFKEPIDIMIGVQPEQ 200
>sp|Q9Z2I9|SUCB1_MOUSE Succinyl-CoA ligase [ADP-forming] subunit
beta, mitochondrial OS=Mus musculus GN=Sucla2 PE=1 SV=2
Length = 463
Score = 154 bits (388), Expect = 5e-37
Identities = 81/197 (41%), Positives = 129/197 (65%), Gaps = 4/197 (2%)
Frame = +1
Query: 85 VRAARRLIRSS---NFSPVKSQHQQLRHLNIHEYQGSKLMSQYGVNVPKGVAVSSISEIK 255
+RAA +++ +S N ++ Q QQ R L++HEY +L+ + GV+VPKG S E
Sbjct: 25 LRAAAQVLGNSGLFNKHGLQVQQQQQRTLSLHEYLSMELLQEAGVSVPKGFVAKSSDEAY 84
Query: 256 NVLEQTFPGEEEVVVKSQILAGGRGLGTFKNGFKGGVHVV-KRNDVETIAEKMLGQVLVT 432
+ ++ G ++VV+K+Q+LAGGRG GTF +G KGGV +V + + ++ +M+GQ L+T
Sbjct: 85 AIAKKL--GSKDVVIKAQVLAGGRGKGTFTSGLKGGVKIVFSPEEAKAVSSQMIGQKLIT 142
Query: 433 KQSGPDGKPVNQVYLCEKLSLVNEMYFAIALDRASAGPVIIACSKGGTSIEDLAEKYPDM 612
KQ+G G+ NQV +CE+ E YFAI ++R+ GPV+I ++GG +IED+A + P+
Sbjct: 143 KQTGEKGRICNQVLVCERKYPRREYYFAITMERSFQGPVLIGSAQGGVNIEDVAAENPEA 202
Query: 613 IIKVPVDIWTGITDKEA 663
I+K P+DI GI ++A
Sbjct: 203 IVKEPIDIVEGIKKEQA 219
>sp|Q9P567|SUCB_NEUCR Probable succinyl-CoA ligase [GDP-forming]
subunit beta, mitochondrial OS=Neurospora crassa
GN=B9J10.140 PE=3 SV=1
Length = 447
Score = 153 bits (386), Expect = 9e-37
Identities = 82/198 (41%), Positives = 125/198 (63%), Gaps = 6/198 (3%)
Frame = +1
Query: 88 RAARRLIRSSNFSPVKSQ-----HQQLRHLNIHEYQGSKLMSQYGVNVPKGVAVSSISEI 252
RA +++ +P+ S+ QQ R L+IHEY + L+ QYG+ VPKG + +E
Sbjct: 8 RALASAFAATSRAPLASRLPSVSQQQRRALSIHEYLSADLLRQYGIGVPKGDVARTGAEA 67
Query: 253 KNVLEQTFPGEEEVVVKSQILAGGRGLGTFKNGFKGGVHVV-KRNDVETIAEKMLGQVLV 429
+ + +Q G E++V+K+Q+LAGGRG GTF NG KGGV V+ + + AE+M+G L+
Sbjct: 68 EAIAKQI--GGEDMVIKAQVLAGGRGKGTFDNGLKGGVRVIYSPTEAKMFAEQMIGHKLI 125
Query: 430 TKQSGPDGKPVNQVYLCEKLSLVNEMYFAIALDRASAGPVIIACSKGGTSIEDLAEKYPD 609
TKQ+G G+ + VY+CE+ E Y A+ +DRAS GPVI++ S+GG IE +A++ P+
Sbjct: 126 TKQTGAQGRLCSAVYICERKFARREFYLAVLMDRASQGPVIVSSSQGGMDIEGVAKENPE 185
Query: 610 MIIKVPVDIWTGITDKEA 663
I +DI G+TD+ A
Sbjct: 186 AIHTTYIDINVGVTDEMA 203
>sp|Q4R517|SUCB1_MACFA Succinyl-CoA ligase [ADP-forming] subunit
beta, mitochondrial OS=Macaca fascicularis GN=SUCLA2
PE=2 SV=1
Length = 463
Score = 152 bits (384), Expect = 2e-36
Identities = 82/198 (41%), Positives = 129/198 (65%), Gaps = 4/198 (2%)
Frame = +1
Query: 82 AVRAARRLIRSS---NFSPVKSQHQQLRHLNIHEYQGSKLMSQYGVNVPKGVAVSSISEI 252
A+ AA +++ SS N ++ Q QQ R+L++HEY +L+ + GV++PKG S E
Sbjct: 24 ALGAAAQVLGSSGLFNNHGLQVQQQQQRNLSLHEYMSMELLQEAGVSIPKGCVAKSPDEA 83
Query: 253 KNVLEQTFPGEEEVVVKSQILAGGRGLGTFKNGFKGGVHVV-KRNDVETIAEKMLGQVLV 429
V ++ G ++VV+K+Q+LAGGRG GTF++G KGGV +V + + ++ +M+G+ L
Sbjct: 84 YAVAKKL--GSKDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLF 141
Query: 430 TKQSGPDGKPVNQVYLCEKLSLVNEMYFAIALDRASAGPVIIACSKGGTSIEDLAEKYPD 609
TKQ+G G+ NQV +CE+ E YFAI ++R+ GPV+I S+GG +IED+A + P+
Sbjct: 142 TKQTGEKGRICNQVLVCERKYPRREYYFAITMERSFQGPVLIGSSQGGVNIEDVAAETPE 201
Query: 610 MIIKVPVDIWTGITDKEA 663
II P+DI GI ++A
Sbjct: 202 AIITEPIDIEEGIKKEQA 219
>sp|O97580|SUCB1_PIG Succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial (Fragment) OS=Sus scrofa GN=SUCLA2 PE=2
SV=1
Length = 425
Score = 150 bits (380), Expect = 4e-36
Identities = 75/176 (42%), Positives = 118/176 (67%), Gaps = 1/176 (0%)
Frame = +1
Query: 139 QHQQLRHLNIHEYQGSKLMSQYGVNVPKGVAVSSISEIKNVLEQTFPGEEEVVVKSQILA 318
Q QQ R+L++HEY +L+ + GV++PKG S E + ++ G ++VV+K+Q+LA
Sbjct: 8 QQQQQRNLSLHEYMSMELLQEAGVSIPKGHVAKSPDEAYAIAKKL--GSKDVVIKAQVLA 65
Query: 319 GGRGLGTFKNGFKGGVHVV-KRNDVETIAEKMLGQVLVTKQSGPDGKPVNQVYLCEKLSL 495
GGRG GTF++G KGGV +V + + ++ +M+G+ L TKQ+G G+ NQV +CE+
Sbjct: 66 GGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERRYP 125
Query: 496 VNEMYFAIALDRASAGPVIIACSKGGTSIEDLAEKYPDMIIKVPVDIWTGITDKEA 663
E YFAI ++R+ GPV+I S+GG +IED+A + P+ I+K P+DI GI ++A
Sbjct: 126 RREYYFAITMERSFQGPVLIGSSQGGVNIEDVAAETPEAIVKEPIDIVEGIKKEQA 181
>sp|Q869S7|SUCB2_DICDI Succinyl-CoA ligase [GDP-forming] subunit
beta, mitochondrial OS=Dictyostelium discoideum GN=scsB
PE=3 SV=1
Length = 420
Score = 144 bits (364), Expect = 3e-34
Identities = 81/182 (44%), Positives = 113/182 (62%), Gaps = 2/182 (1%)
Frame = +1
Query: 121 FSPVKSQHQQLRHLNIHEYQGSKLMSQYGVNVPKGVAVSSISEIKNVLEQTFPGEEEVVV 300
F+P K Q+R+LN+HEYQ LM +YGVN K V+ S+ + E+VV
Sbjct: 17 FNPSK---YQVRYLNLHEYQSKSLMDKYGVNTQKWRVVTKASDAIKAASEL---NGELVV 70
Query: 301 KSQILAGGRGLGTF-KNGFKGGVHVVKRN-DVETIAEKMLGQVLVTKQSGPDGKPVNQVY 474
K+Q+ AGGRG G+F + GFKGGVH+ K + E + ++MLG+ LVTKQ+ +G V V
Sbjct: 71 KAQVHAGGRGKGSFIETGFKGGVHLCKTGKEAERLCDEMLGKHLVTKQTTKEGTKVQSVM 130
Query: 475 LCEKLSLVNEMYFAIALDRASAGPVIIACSKGGTSIEDLAEKYPDMIIKVPVDIWTGITD 654
L E + E+YFAI +DR GPV+IA +GG IE +AE+ PD+I K P+DI GI
Sbjct: 131 LAESVDPKRELYFAIVMDRKYGGPVMIASPQGGVDIESVAEETPDLIFKEPIDIVKGIRP 190
Query: 655 KE 660
++
Sbjct: 191 EQ 192
>sp|P53587|SUCB_NEOFR Succinyl-CoA ligase [GDP-forming] subunit
beta, hydrogenosomal OS=Neocallimastix frontalis GN=SCSB
PE=2 SV=2
Length = 437
Score = 143 bits (361), Expect = 7e-34
Identities = 76/177 (42%), Positives = 110/177 (62%), Gaps = 1/177 (0%)
Frame = +1
Query: 136 SQHQQLRHLNIHEYQGSKLMSQYGVNVPKGVAVSSISEIKNVLEQTFPGEEEVVVKSQIL 315
+Q Q R L++HEY L+ +Y VN PKG+ + E ++ E++V+K+Q+L
Sbjct: 20 AQTAQKRFLSVHEYCSMNLLHEYNVNAPKGIVAKTPEEAYQAAKKL--NTEDLVIKAQVL 77
Query: 316 AGGRGLGTFKNGFKGGVHVVKRND-VETIAEKMLGQVLVTKQSGPDGKPVNQVYLCEKLS 492
AGGRG G F +G +GGV + + V+ A KMLG L+TKQ+G G+ N VY+ E+
Sbjct: 78 AGGRGKGHFDSGLQGGVKLCYTPEQVKDYASKMLGHKLITKQTGAAGRDCNAVYVVERQY 137
Query: 493 LVNEMYFAIALDRASAGPVIIACSKGGTSIEDLAEKYPDMIIKVPVDIWTGITDKEA 663
E YFAI LDRA+ GPV++A S+GG IE++A+ PD I+ VP I TG+T + A
Sbjct: 138 AAREYYFAILLDRATRGPVLVASSEGGVEIEEVAKTNPDAILTVPFSIKTGLTREVA 194
|
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
Q8LAV0 |
| Definition |
tr|Q8LAV0|Q8LAV0_ARATH Succinyl-CoA ligase beta subunit OS=Arabidopsis thaliana |
| Align length |
177 |
| Score (bit) |
275.0 |
| E-value |
2.0e-72 |
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK957673|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0028_P20, 5'
(665 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|Q8LAV0|Q8LAV0_ARATH Succinyl-CoA ligase beta subunit OS=Arabi... 275 2e-72
tr|Q0DZG1|Q0DZG1_ORYSJ Os02g0621700 protein OS=Oryza sativa subs... 275 2e-72
tr|A2X7C5|A2X7C5_ORYSI Putative uncharacterized protein OS=Oryza... 275 2e-72
tr|A5BF93|A5BF93_VITVI Putative uncharacterized protein (Chromos... 273 7e-72
tr|B6TS21|B6TS21_MAIZE Succinyl-CoA ligase beta-chain OS=Zea may... 271 2e-71
tr|B4FRH5|B4FRH5_MAIZE Putative uncharacterized protein OS=Zea m... 271 2e-71
tr|Q84LB6|Q84LB6_SOLLC Succinyl CoA ligase beta subunit OS=Solan... 271 3e-71
tr|Q2PYW7|Q2PYW7_SOLTU Succinyl CoA ligase beta subunit-like pro... 270 6e-71
tr|A5HIG2|A5HIG2_9FABA Succinyl-CoA ligase beta subunit OS=Carag... 267 5e-70
tr|A8IQ05|A8IQ05_CHLRE Succinate-coa ligase beta chain OS=Chlamy... 216 8e-55
tr|Q01AE2|Q01AE2_OSTTA Succinyl-CoA-ligase beta subunit (ISS) (F... 196 8e-49
tr|A4RWK4|A4RWK4_OSTLU Predicted protein OS=Ostreococcus lucimar... 192 1e-47
tr|A8IQ09|A8IQ09_CHLRE Succinate-coa ligase beta chain, minor is... 190 6e-47
tr|B2WEE5|B2WEE5_PYRTR Succinyl-CoA ligase beta-chain OS=Pyrenop... 165 2e-39
tr|Q5EMY4|Q5EMY4_MAGGR Succinyl-CoA ligase beta-chain-like prote... 159 1e-37
tr|A2R2D0|A2R2D0_ASPNC Catalytic activity: GTP + succinate + CoA... 159 1e-37
tr|A1D9H2|A1D9H2_NEOFI Succinyl-CoA synthetase beta subunit, put... 159 1e-37
tr|Q0CU90|Q0CU90_ASPTN Succinyl-CoA ligase beta-chain, mitochond... 157 6e-37
tr|B2B0Y1|B2B0Y1_PODAN Predicted CDS Pa_3_7700 OS=Podospora anse... 157 6e-37
tr|B2ELR2|B2ELR2_9BACT Succinyl-CoA synthetase, beta subunit OS=... 156 1e-36
tr|Q148D5|Q148D5_BOVIN Succinate-CoA ligase, ADP-forming, beta s... 155 2e-36
tr|Q6N0B1|Q6N0B1_HUMAN Putative uncharacterized protein DKFZp686... 155 2e-36
tr|B2RDE7|B2RDE7_HUMAN cDNA, FLJ96579, highly similar to Homo sa... 155 2e-36
tr|Q4W9L3|Q4W9L3_ASPFU Succinyl-CoA synthetase beta subunit, put... 155 2e-36
tr|B0YEA5|B0YEA5_ASPFC Succinyl-CoA synthetase beta subunit, put... 155 2e-36
tr|B8BS06|B8BS06_THAPS Precursor of synthetase OS=Thalassiosira ... 155 3e-36
tr|Q5R6V4|Q5R6V4_PONAB Putative uncharacterized protein DKFZp459... 155 3e-36
tr|Q0UJS3|Q0UJS3_PHANO Putative uncharacterized protein OS=Phaeo... 155 3e-36
tr|A6RDI9|A6RDI9_AJECN Succinyl-CoA ligase beta-chain, mitochond... 154 5e-36
tr|Q3UCC6|Q3UCC6_MOUSE Putative uncharacterized protein (Fragmen... 154 6e-36
>tr|Q8LAV0|Q8LAV0_ARATH Succinyl-CoA ligase beta subunit
OS=Arabidopsis thaliana PE=2 SV=1
Length = 421
Score = 275 bits (703), Expect = 2e-72
Identities = 132/177 (74%), Positives = 156/177 (88%)
Frame = +1
Query: 133 KSQHQQLRHLNIHEYQGSKLMSQYGVNVPKGVAVSSISEIKNVLEQTFPGEEEVVVKSQI 312
K Q+QQLR LNIHEYQG++LM +YGVNVPKGVA SS+ E+K ++ FP E E+VVKSQI
Sbjct: 18 KWQNQQLRRLNIHEYQGAELMGKYGVNVPKGVAASSLEEVKKAIQDVFPNESELVVKSQI 77
Query: 313 LAGGRGLGTFKNGFKGGVHVVKRNDVETIAEKMLGQVLVTKQSGPDGKPVNQVYLCEKLS 492
LAGGRGLGTFK+G KGGVH+VKR++ E IA KMLGQVLVTKQ+GP GK V++VYLCEKLS
Sbjct: 78 LAGGRGLGTFKSGLKGGVHIVKRDEAEEIAGKMLGQVLVTKQTGPQGKVVSKVYLCEKLS 137
Query: 493 LVNEMYFAIALDRASAGPVIIACSKGGTSIEDLAEKYPDMIIKVPVDIWTGITDKEA 663
LVNEMYF+I LDR SAGP+IIAC KGGTSIEDLAEK+PDMIIKVP+D++ GITD++A
Sbjct: 138 LVNEMYFSIILDRKSAGPLIIACKKGGTSIEDLAEKFPDMIIKVPIDVFAGITDEDA 194
>tr|Q0DZG1|Q0DZG1_ORYSJ Os02g0621700 protein OS=Oryza sativa subsp.
japonica GN=Os02g0621700 PE=2 SV=1
Length = 422
Score = 275 bits (702), Expect = 2e-72
Identities = 129/177 (72%), Positives = 155/177 (87%)
Frame = +1
Query: 133 KSQHQQLRHLNIHEYQGSKLMSQYGVNVPKGVAVSSISEIKNVLEQTFPGEEEVVVKSQI 312
K QHQQLR LNIHEYQG++LM +YG+NVP+G A S+ E+KN L+ FP E+E+VVKSQI
Sbjct: 19 KWQHQQLRRLNIHEYQGAELMGKYGINVPRGAAAGSVEEVKNTLKNVFPSEKEIVVKSQI 78
Query: 313 LAGGRGLGTFKNGFKGGVHVVKRNDVETIAEKMLGQVLVTKQSGPDGKPVNQVYLCEKLS 492
LAGGRGLGTFK+G +GGVH+VK + E++A KMLGQ+LVTKQ+GP GK V++VYLCEKLS
Sbjct: 79 LAGGRGLGTFKSGLQGGVHIVKAEEAESLAAKMLGQILVTKQTGPQGKIVSKVYLCEKLS 138
Query: 493 LVNEMYFAIALDRASAGPVIIACSKGGTSIEDLAEKYPDMIIKVPVDIWTGITDKEA 663
LVNEMYFAI LDR +AGP+IIACSKGGTSIEDLAEKYPDMIIKVP+D++ GITD +A
Sbjct: 139 LVNEMYFAITLDRNTAGPLIIACSKGGTSIEDLAEKYPDMIIKVPIDVFKGITDDDA 195
>tr|A2X7C5|A2X7C5_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_08117 PE=3 SV=1
Length = 422
Score = 275 bits (702), Expect = 2e-72
Identities = 129/177 (72%), Positives = 155/177 (87%)
Frame = +1
Query: 133 KSQHQQLRHLNIHEYQGSKLMSQYGVNVPKGVAVSSISEIKNVLEQTFPGEEEVVVKSQI 312
K QHQQLR LNIHEYQG++LM +YG+NVP+G A S+ E+KN L+ FP E+E+VVKSQI
Sbjct: 19 KWQHQQLRRLNIHEYQGAELMGKYGINVPRGAAAGSVEEVKNTLKNVFPSEKEIVVKSQI 78
Query: 313 LAGGRGLGTFKNGFKGGVHVVKRNDVETIAEKMLGQVLVTKQSGPDGKPVNQVYLCEKLS 492
LAGGRGLGTFK+G +GGVH+VK + E++A KMLGQ+LVTKQ+GP GK V++VYLCEKLS
Sbjct: 79 LAGGRGLGTFKSGLQGGVHIVKAEEAESLAAKMLGQILVTKQTGPQGKIVSKVYLCEKLS 138
Query: 493 LVNEMYFAIALDRASAGPVIIACSKGGTSIEDLAEKYPDMIIKVPVDIWTGITDKEA 663
LVNEMYFAI LDR +AGP+IIACSKGGTSIEDLAEKYPDMIIKVP+D++ GITD +A
Sbjct: 139 LVNEMYFAITLDRNTAGPLIIACSKGGTSIEDLAEKYPDMIIKVPIDVFKGITDDDA 195
>tr|A5BF93|A5BF93_VITVI Putative uncharacterized protein (Chromosome
chr7 scaffold_44, whole genome shotgun sequence)
OS=Vitis vinifera GN=GSVIVT00028552001 PE=3 SV=1
Length = 423
Score = 273 bits (698), Expect = 7e-72
Identities = 129/177 (72%), Positives = 156/177 (88%)
Frame = +1
Query: 133 KSQHQQLRHLNIHEYQGSKLMSQYGVNVPKGVAVSSISEIKNVLEQTFPGEEEVVVKSQI 312
K Q QQLR LNIHEYQG++LMS+YG+NVPKGVAV SI E++ ++ FP E E+VVKSQI
Sbjct: 19 KWQQQQLRRLNIHEYQGAELMSKYGINVPKGVAVGSIEEVRKTIQDVFPKENELVVKSQI 78
Query: 313 LAGGRGLGTFKNGFKGGVHVVKRNDVETIAEKMLGQVLVTKQSGPDGKPVNQVYLCEKLS 492
LAGGRGLGTFK+G KGGVH+VK + VE +A KMLGQ+LVTKQ+GP GK V++VYLCEK+S
Sbjct: 79 LAGGRGLGTFKSGLKGGVHIVKTDQVEELAGKMLGQILVTKQTGPQGKVVSKVYLCEKMS 138
Query: 493 LVNEMYFAIALDRASAGPVIIACSKGGTSIEDLAEKYPDMIIKVPVDIWTGITDKEA 663
LVNEMYFAI LDR+SAGP+IIAC KGGTSIEDLAEK+PDMI+KVP+D++ GITD++A
Sbjct: 139 LVNEMYFAITLDRSSAGPIIIACRKGGTSIEDLAEKFPDMIVKVPIDVFQGITDEDA 195
>tr|B6TS21|B6TS21_MAIZE Succinyl-CoA ligase beta-chain OS=Zea mays
PE=2 SV=1
Length = 422
Score = 271 bits (694), Expect = 2e-71
Identities = 127/175 (72%), Positives = 154/175 (88%)
Frame = +1
Query: 139 QHQQLRHLNIHEYQGSKLMSQYGVNVPKGVAVSSISEIKNVLEQTFPGEEEVVVKSQILA 318
QHQQLR LNIHEYQG++LM +YG+NVP+G A S+ E+ + L+ FP E+E+VVKSQILA
Sbjct: 21 QHQQLRRLNIHEYQGAELMGKYGINVPRGAAAGSVQEVNDALKNMFPSEKEIVVKSQILA 80
Query: 319 GGRGLGTFKNGFKGGVHVVKRNDVETIAEKMLGQVLVTKQSGPDGKPVNQVYLCEKLSLV 498
GGRGLGTFK+G +GGVH+VK + E+IA KMLGQ+LVTKQ+GP+GK V++VYLCEKLSL
Sbjct: 81 GGRGLGTFKSGLQGGVHIVKAEEAESIARKMLGQILVTKQTGPEGKIVSKVYLCEKLSLT 140
Query: 499 NEMYFAIALDRASAGPVIIACSKGGTSIEDLAEKYPDMIIKVPVDIWTGITDKEA 663
NEMYFAI LDR +AGP+IIACSKGGTSIEDLAEKYPDMIIKVPVD++ GITD++A
Sbjct: 141 NEMYFAITLDRKTAGPLIIACSKGGTSIEDLAEKYPDMIIKVPVDVFKGITDEDA 195
>tr|B4FRH5|B4FRH5_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 422
Score = 271 bits (694), Expect = 2e-71
Identities = 126/175 (72%), Positives = 154/175 (88%)
Frame = +1
Query: 139 QHQQLRHLNIHEYQGSKLMSQYGVNVPKGVAVSSISEIKNVLEQTFPGEEEVVVKSQILA 318
QHQQLR LNIHEYQG++LM +YG+NVP+G A S+ E+K+ L+ FP E+E+VVKSQILA
Sbjct: 21 QHQQLRRLNIHEYQGAELMGKYGINVPRGAAAGSVHEVKDALKNMFPSEKEIVVKSQILA 80
Query: 319 GGRGLGTFKNGFKGGVHVVKRNDVETIAEKMLGQVLVTKQSGPDGKPVNQVYLCEKLSLV 498
GGRGLGTFK+G +GGVH+VK + E IA KMLGQ+L+TKQ+GP+GK V++VYLCEKLSL
Sbjct: 81 GGRGLGTFKSGLQGGVHIVKAEEAELIASKMLGQILITKQTGPEGKIVSKVYLCEKLSLT 140
Query: 499 NEMYFAIALDRASAGPVIIACSKGGTSIEDLAEKYPDMIIKVPVDIWTGITDKEA 663
NEMYFAI LDR +AGP+IIACSKGGTSIEDLAEKYPDMIIKVP+D++ GITD++A
Sbjct: 141 NEMYFAITLDRKTAGPLIIACSKGGTSIEDLAEKYPDMIIKVPIDVFKGITDEDA 195
>tr|Q84LB6|Q84LB6_SOLLC Succinyl CoA ligase beta subunit OS=Solanum
lycopersicum PE=2 SV=1
Length = 417
Score = 271 bits (692), Expect = 3e-71
Identities = 130/189 (68%), Positives = 159/189 (84%)
Frame = +1
Query: 97 RRLIRSSNFSPVKSQHQQLRHLNIHEYQGSKLMSQYGVNVPKGVAVSSISEIKNVLEQTF 276
R+L S K Q QQLR LNIHEYQG++LMS+YG+NVPKGVAV+S+ E+K ++ F
Sbjct: 3 RKLANQSLSVAGKWQQQQLRRLNIHEYQGAELMSKYGINVPKGVAVASLDEVKKAIQDVF 62
Query: 277 PGEEEVVVKSQILAGGRGLGTFKNGFKGGVHVVKRNDVETIAEKMLGQVLVTKQSGPDGK 456
P + EVVVKSQ+LAGGRGLGTFKNGF+GGVH+VK + E IA KMLGQ+LVTKQ+G GK
Sbjct: 63 PNQSEVVVKSQVLAGGRGLGTFKNGFQGGVHIVKADQAEDIASKMLGQILVTKQTGAQGK 122
Query: 457 PVNQVYLCEKLSLVNEMYFAIALDRASAGPVIIACSKGGTSIEDLAEKYPDMIIKVPVDI 636
V++VYLCEK+SLVNEMYF+I LDRA+AGP+IIAC KGGTSIEDLAEK+PDMIIKVP+D+
Sbjct: 123 VVSKVYLCEKMSLVNEMYFSIILDRATAGPLIIACRKGGTSIEDLAEKFPDMIIKVPIDV 182
Query: 637 WTGITDKEA 663
+ GI+D +A
Sbjct: 183 FKGISDADA 191
>tr|Q2PYW7|Q2PYW7_SOLTU Succinyl CoA ligase beta subunit-like
protein OS=Solanum tuberosum PE=2 SV=1
Length = 421
Score = 270 bits (690), Expect = 6e-71
Identities = 129/189 (68%), Positives = 159/189 (84%)
Frame = +1
Query: 97 RRLIRSSNFSPVKSQHQQLRHLNIHEYQGSKLMSQYGVNVPKGVAVSSISEIKNVLEQTF 276
R+L S K Q QQLR LNIHEYQG++LM +YG+NVPKGVAV+S+ E+K ++ F
Sbjct: 7 RKLANQSLSVAGKWQQQQLRRLNIHEYQGAELMGKYGINVPKGVAVASLDEVKKAIQDVF 66
Query: 277 PGEEEVVVKSQILAGGRGLGTFKNGFKGGVHVVKRNDVETIAEKMLGQVLVTKQSGPDGK 456
P + EVVVKSQ+LAGGRGLGTFKNGF+GGVH+VK + E IA KMLGQ+LVTKQ+G GK
Sbjct: 67 PNQSEVVVKSQVLAGGRGLGTFKNGFQGGVHIVKADQAEEIASKMLGQILVTKQTGAQGK 126
Query: 457 PVNQVYLCEKLSLVNEMYFAIALDRASAGPVIIACSKGGTSIEDLAEKYPDMIIKVPVDI 636
V++VYLCEK+SLVNEMYF+I LDRA+AGP+IIAC KGGTSIEDLAEK+PDMIIKVP+D+
Sbjct: 127 VVSKVYLCEKMSLVNEMYFSIILDRATAGPLIIACRKGGTSIEDLAEKFPDMIIKVPIDV 186
Query: 637 WTGITDKEA 663
+ GI+D++A
Sbjct: 187 FKGISDEDA 195
>tr|A5HIG2|A5HIG2_9FABA Succinyl-CoA ligase beta subunit OS=Caragana
jubata PE=2 SV=1
Length = 421
Score = 267 bits (682), Expect = 5e-70
Identities = 128/177 (72%), Positives = 156/177 (88%)
Frame = +1
Query: 133 KSQHQQLRHLNIHEYQGSKLMSQYGVNVPKGVAVSSISEIKNVLEQTFPGEEEVVVKSQI 312
K Q+QQLR LNIHEYQG++LMS+YGVNVP+GVAVSSI E++ ++ F + EVVVKS+I
Sbjct: 19 KWQNQQLRRLNIHEYQGAELMSKYGVNVPRGVAVSSIEEVRKAIKDVFANQNEVVVKSRI 78
Query: 313 LAGGRGLGTFKNGFKGGVHVVKRNDVETIAEKMLGQVLVTKQSGPDGKPVNQVYLCEKLS 492
LAGGRGLGTFK+G +GGVH+VK + VE +A KMLGQ+LVTKQ+GP GK V++VYLCEKLS
Sbjct: 79 LAGGRGLGTFKSGLQGGVHIVKTDQVEDLAGKMLGQILVTKQTGPQGKVVSKVYLCEKLS 138
Query: 493 LVNEMYFAIALDRASAGPVIIACSKGGTSIEDLAEKYPDMIIKVPVDIWTGITDKEA 663
LVNEMYFAI LDR +AGP+IIAC KGGTSIEDLAEK+PDMIIKVP+D++ GITD++A
Sbjct: 139 LVNEMYFAITLDRKTAGPLIIACRKGGTSIEDLAEKFPDMIIKVPIDVFEGITDEDA 195
>tr|A8IQ05|A8IQ05_CHLRE Succinate-coa ligase beta chain
OS=Chlamydomonas reinhardtii GN=SCLB1a|SCLB1b PE=3 SV=1
Length = 421
Score = 216 bits (551), Expect = 8e-55
Identities = 102/176 (57%), Positives = 137/176 (77%)
Frame = +1
Query: 136 SQHQQLRHLNIHEYQGSKLMSQYGVNVPKGVAVSSISEIKNVLEQTFPGEEEVVVKSQIL 315
SQ QQLR N+HEYQG+++MS++GVNVP G+ +++ E+K ++Q + EVV+KSQIL
Sbjct: 21 SQCQQLRFFNVHEYQGAQIMSKFGVNVPPGIPATTLDEVKKAVDQMADEKGEVVIKSQIL 80
Query: 316 AGGRGLGTFKNGFKGGVHVVKRNDVETIAEKMLGQVLVTKQSGPDGKPVNQVYLCEKLSL 495
AGGRGLG F NG +GGVH+V + +A++MLG LVTKQ+GP GKPVN + + +K+ L
Sbjct: 81 AGGRGLGKFTNGLQGGVHIVPKAKALELAKQMLGATLVTKQTGPAGKPVNTLLISKKMKL 140
Query: 496 VNEMYFAIALDRASAGPVIIACSKGGTSIEDLAEKYPDMIIKVPVDIWTGITDKEA 663
EMYFAI LDR +AGP++I CS+GGTSIEDLAEK+P+ IIK+P+DI GITD +A
Sbjct: 141 KREMYFAILLDRKTAGPMMIGCSEGGTSIEDLAEKFPEKIIKIPIDIRVGITDAQA 196
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