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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK957690
Clone id TST39A01NGRL0029_A13
Library
Length 337
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0029_A13. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
AATATGGTACGCTTTTCTCCAGAGATCACCACTGTCATTGTTGCCATGGCTTTGATAGTG
ATGATGATGGGAGCAATGGCCCAATCGCATGAGGAACACAACCACGGCCCTGCCGAAGCG
CCACACATGGGTCATGACTCTGCGGCGTCCACACCGATTTGCTTCTTCTCACAGCTAGCT
GCCATAGCCTTCCCTGTCTGGCTCTTGGCCTTCGTGTTCTAGACAGGTGGACCATTATTA
TCTTTGCAAATAACATGCTCCAAAACGAGATGCACATGGTTCTTCAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q753D9
Definition sp|Q753D9|PKH3_ASHGO Serine/threonine-protein kinase PKH3 OS=Ashbya gossypii
Align length 27
Score (bit) 28.9
E-value 8.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK957690|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0029_A13, 5'
         (285 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q753D9|PKH3_ASHGO Serine/threonine-protein kinase PKH3 OS=Ash...    29   8.3  

>sp|Q753D9|PKH3_ASHGO Serine/threonine-protein kinase PKH3 OS=Ashbya
           gossypii GN=PKH3 PE=3 SV=1
          Length = 726

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +2

Query: 68  WEQWPNRMRNTTTALPKRHTWVMTLRR 148
           W  WPN+  + +  +P + TW  TL +
Sbjct: 558 WIVWPNKPTSASRRIPIKETWAQTLSK 584
tr_hit_id Q6K6P6
Definition tr|Q6K6P6|Q6K6P6_ORYSJ Putative uncharacterized protein P0042D01.11 OS=Oryza sativa subsp. japonica
Align length 49
Score (bit) 33.9
E-value 4.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK957690|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0029_A13, 5'
         (285 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q6K6P6|Q6K6P6_ORYSJ Putative uncharacterized protein P0042D01...    34   4.2  

>tr|Q6K6P6|Q6K6P6_ORYSJ Putative uncharacterized protein P0042D01.11
           OS=Oryza sativa subsp. japonica GN=P0042D01.11 PE=4 SV=1
          Length = 213

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 18/49 (36%), Positives = 23/49 (46%)
 Frame = -3

Query: 247 AKIIMVHLSRTRRPRARQGRLWQLAVRRSKSVWTPQSHDPCVALRQGRG 101
           A+     LSRTR    R  R  +L  RR  + W P    PC+ +R  RG
Sbjct: 104 AEAATTRLSRTRAASRRPRRCGRLRARRVAAAWGPAVSRPCLRVRLTRG 152