DK957693
Clone id TST39A01NGRL0029_A16
Library
Length 591
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0029_A16. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
CACGGATGATTCGGAATGGTCATTGGTGGCAGCCGTTCTTACACGATTGCACTCTCCTTC
ACACACTCGCGCGCGCACACAAAAGATAGCTCTGCACACACAGCTGGTTTTCCTTCTCCT
CCTCCTCGTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACACAC
ACACACACACACACTGTCACCCACCCACCCACTCACCAGACAGTGATAGCGACAAATTGT
TAAACCCACATTTCCTTGCATGTGTTCGCCGTGTCACACGAGCCGCAAGTAGCTGGGCGA
AGGCGATCTTGGAGCCCCACAGAGGAAACTTGCGCGTCAGCATCTCTCAGGGAGTGAAAG
AGGATTTGTTCTGTCATCCATTGTGGTATTTTCCAAATAGCAAGCCATCCTTTGAACCTC
AGGATGGCTCTAAATCTGACGACATTACACTCACCCTCTTCTCCAAGCGTATCTGCTCCT
CAGAAGCTATCAATTCTTGCCTCTGCCCTTAATGGATGTCAGCCTAACTACAAACCAAGC
ATAAGGGCCTCACTATATTACCCGTTTGAACCTTACTCCATTTCACTAGTG
■■Homology search results ■■ -
sp_hit_id Q9CTG6
Definition sp|Q9CTG6|AT132_MOUSE Probable cation-transporting ATPase 13A2 OS=Mus musculus
Align length 99
Score (bit) 37.7
E-value 0.044
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK957693|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0029_A16, 5'
(591 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9CTG6|AT132_MOUSE Probable cation-transporting ATPase 13A2 O... 38 0.044
sp|Q29485|PLMN_ERIEU Plasminogen OS=Erinaceus europaeus GN=PLG P... 33 1.4
sp|A5EVQ3|LIPA_DICNV Lipoyl synthase OS=Dichelobacter nodosus (s... 31 4.0

>sp|Q9CTG6|AT132_MOUSE Probable cation-transporting ATPase 13A2
OS=Mus musculus GN=Atp13a2 PE=2 SV=2
Length = 1169

Score = 37.7 bits (86), Expect = 0.044
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 1/99 (1%)
Frame = +1

Query: 295 GRRRSWSPTEETCASASLRE*KRICSVIHCGIFQIASHPLNLRMALNLTTLHSPSSPSVS 474
G+R W T++ SL + R C +HC +S L+L+ T++ P+ S+
Sbjct: 165 GQRYVWMETQQAFCQVSLLDHSRTCDDVHC-----SSSGLSLQDQATRKTIYGPNVISIP 219

Query: 475 APQKLSILA-SALNGCQPNYKPSIRASLYYPFEPYSISL 588
L +LA ALN YY F+ +SI+L
Sbjct: 220 VKSYLQLLADEALNP-------------YYGFQAFSIAL 245


>sp|Q29485|PLMN_ERIEU Plasminogen OS=Erinaceus europaeus GN=PLG PE=2
SV=1
Length = 810

Score = 32.7 bits (73), Expect = 1.4
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -1

Query: 321 CGAPRSPS-PSYLRLV*HGEHMQGNVGLTICRYHC 220
C P PS P+Y L+ +GEH QGNV +T+ C
Sbjct: 262 CTTPPPPSGPTYQCLMGNGEHYQGNVAVTVSGLTC 296


>sp|A5EVQ3|LIPA_DICNV Lipoyl synthase OS=Dichelobacter nodosus
(strain VCS1703A) GN=lipA PE=3 SV=1
Length = 324

Score = 31.2 bits (69), Expect = 4.0
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 3/52 (5%)
Frame = +3

Query: 249 HFLACVRRVTRAASSWAKAILEPH---RGNLRVSISQGVKEDLFCHPLWYFP 395
HF AC+R + R + IL P R L V I D+F H L P
Sbjct: 152 HFAACIREIRRVSPKMTIEILTPDFRGRAELAVQILSATPPDVFNHNLETIP 203


tr_hit_id Q8CIJ9
Definition tr|Q8CIJ9|Q8CIJ9_MOUSE Atp13a2 protein OS=Mus musculus
Align length 99
Score (bit) 37.7
E-value 0.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK957693|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0029_A16, 5'
(591 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q8CIJ9|Q8CIJ9_MOUSE Atp13a2 protein OS=Mus musculus GN=Atp13a... 38 0.50
tr|A2AA78|A2AA78_MOUSE ATPase type 13A2 OS=Mus musculus GN=Atp13... 37 0.85
tr|B3PRV4|B3PRV4_RHIE6 Putative metalloprotease protein OS=Rhizo... 34 5.5
tr|B0JBD9|B0JBD9_RHILT Peptidase M48 Ste24p OS=Rhizobium legumin... 33 9.4

>tr|Q8CIJ9|Q8CIJ9_MOUSE Atp13a2 protein OS=Mus musculus GN=Atp13a2
PE=2 SV=1
Length = 650

Score = 37.7 bits (86), Expect = 0.50
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 1/99 (1%)
Frame = +1

Query: 295 GRRRSWSPTEETCASASLRE*KRICSVIHCGIFQIASHPLNLRMALNLTTLHSPSSPSVS 474
G+R W T++ SL + R C +HC +S L+L+ T++ P+ S+
Sbjct: 157 GQRYVWMETQQAFCQVSLLDHSRTCDDVHC-----SSSGLSLQDQATRKTIYGPNVISIP 211

Query: 475 APQKLSILA-SALNGCQPNYKPSIRASLYYPFEPYSISL 588
L +LA ALN YY F+ +SI+L
Sbjct: 212 VKSYLQLLADEALNP-------------YYGFQAFSIAL 237


>tr|A2AA78|A2AA78_MOUSE ATPase type 13A2 OS=Mus musculus GN=Atp13a2
PE=3 SV=1
Length = 1169

Score = 37.0 bits (84), Expect = 0.85
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 1/99 (1%)
Frame = +1

Query: 295 GRRRSWSPTEETCASASLRE*KRICSVIHCGIFQIASHPLNLRMALNLTTLHSPSSPSVS 474
G+R W T++ SL + R C +HC +S L+L+ T++ P+ S+
Sbjct: 165 GQRYVWMETQQAFCQVSLLDHGRTCDDVHC-----SSSGLSLQDQATRKTIYGPNVISIP 219

Query: 475 APQKLSILA-SALNGCQPNYKPSIRASLYYPFEPYSISL 588
L +LA ALN YY F+ +SI+L
Sbjct: 220 VKSYLQLLADEALNP-------------YYGFQAFSIAL 245


>tr|B3PRV4|B3PRV4_RHIE6 Putative metalloprotease protein
OS=Rhizobium etli (strain CIAT 652) GN=RHECIAT_CH0004316
PE=4 SV=1
Length = 513

Score = 34.3 bits (77), Expect = 5.5
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 13/53 (24%)
Frame = +1

Query: 433 NLTTLHSP--SSPSVSAPQK-------LSILASALNGCQ----PNYKPSIRAS 552
+LTT SP SS ++SAP++ LS +A ALNGCQ +Y+PSI S
Sbjct: 8 SLTTWKSPALSSDAISAPRRFARRLMLLSAIAMALNGCQSLIEQSYQPSISPS 60


>tr|B0JBD9|B0JBD9_RHILT Peptidase M48 Ste24p OS=Rhizobium
leguminosarum bv. trifolii WSM1325 GN=RlegDRAFT_5483
PE=4 SV=1
Length = 533

Score = 33.5 bits (75), Expect = 9.4
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 13/53 (24%)
Frame = +1

Query: 433 NLTTLHSP--SSPSVSAPQK-------LSILASALNGCQ----PNYKPSIRAS 552
+LTT SP SS ++SAP++ LS +A ALNGCQ +Y+PS+ S
Sbjct: 28 SLTTWKSPALSSDAISAPRRFARRMMLLSAVAMALNGCQTLIDQSYQPSVSPS 80