DK957724 |
Clone id |
TST39A01NGRL0029_B23 |
Library |
TST39 |
Length |
662 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0029_B23. 5' end sequence. |
Accession |
DK957724 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL233Contig1 |
Sequence |
GTTCGAAACTCACTCCCCTTTCGCTTCTCTGCGTGGGCGGAGCTTCGAGCAACTGAACGA AGGGCTACCGGTCAAAAGCTTCAGGCAGCTCAGACGTAAGAAGCATCATCTGCTGCAAGC TTTTGTGCTCCTTGAGAAGGAGATGCTGCAGATTCTGTTGTAGGTGTGTTCTCTTCACTC CGGTGAAGTGAAGACCGGTGATATGTACAAAGATAGGGGTGATGGGCGTGGTGGAAGCCG TGAATCTATCGATGCTAAGAAGCGCATTGAGGAGACTCTAGAGAGGACATCTCCTTCGAC ATCCAAGGGAAATGCAAGGGAAAAAGATCGTGTTTCTATGGTGCCTGCATCAACTGGTAG ACGCCTAGGCTCTGTTGACTTAAGGCCTACATTTGACAAGACCAAGTATGCAGACGATGG CGAAGAATCAGAGACTGACAGCGAAGAATCGGATGTTAGTGGATCAGATGGTGACGACAC TTCTTGGGTTTCTTGGTTTTGCGGTTTGAGAGGGAATGAGTTCTTTTGTGAGGTGGACGA CGAGTACATTCAGGATGATTTCAATTTAAGTGGACTAAGCAGCCAGGTCCCTTATTATGA GTATGCACTGGATTTGATTCTGGATGCAGAGTCTCCGAATGTTGACATGTTAACTGATGA GC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P40228 |
Definition |
sp|P40228|CSK2B_ARATH Casein kinase II subunit beta OS=Arabidopsis thaliana |
Align length |
150 |
Score (bit) |
101.0 |
E-value |
3.0e-21 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9T768 |
Definition |
tr|A9T768|A9T768_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
143 |
Score (bit) |
142.0 |
E-value |
1.0e-32 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK957724|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0029_B23, 5' (662 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9T768|A9T768_PHYPA Predicted protein OS=Physcomitrella paten... 142 1e-32 tr|A9T5Q0|A9T5Q0_PHYPA Predicted protein OS=Physcomitrella paten... 126 1e-27 tr|B8LPQ3|B8LPQ3_PICSI Putative uncharacterized protein OS=Picea... 116 1e-24 tr|A9RL84|A9RL84_PHYPA Predicted protein OS=Physcomitrella paten... 112 2e-23 tr|A7PK61|A7PK61_VITVI Chromosome chr15 scaffold_19, whole genom... 110 6e-23 tr|A9PJM8|A9PJM8_POPJC Putative uncharacterized protein OS=Popul... 108 4e-22 tr|Q9FQF8|Q9FQF8_MAIZE Protein kinase CK2 regulatory subunit CK2... 107 9e-22 tr|B6T9Z0|B6T9Z0_MAIZE Casein kinase II subunit beta-4 OS=Zea ma... 106 1e-21 tr|Q9AY38|Q9AY38_ORYSA Putative casein kinase II beta subunit OS... 105 2e-21 tr|Q336R5|Q336R5_ORYSJ Casein kinase II beta-4 subunit, putative... 105 2e-21 tr|Q0KKA4|Q0KKA4_HORVU Casein kinase II beta OS=Hordeum vulgare ... 105 2e-21 tr|B8BIA2|B8BIA2_ORYSI Putative uncharacterized protein OS=Oryza... 105 2e-21 tr|A9S7H2|A9S7H2_PHYPA Predicted protein OS=Physcomitrella paten... 105 2e-21 tr|Q7XC26|Q7XC26_ORYSJ Casein kinase II beta-4 subunit, putative... 104 4e-21 tr|Q336R6|Q336R6_ORYSJ Os10g0564900 protein OS=Oryza sativa subs... 104 4e-21 tr|A5BGR6|A5BGR6_VITVI Putative uncharacterized protein OS=Vitis... 103 1e-20 tr|Q2V308|Q2V308_ARATH Uncharacterized protein At5g47080.3 OS=Ar... 102 2e-20 tr|Q8LPD2|Q8LPD2_TOBAC Protein kinase Ck2 regulatory subunit 2 O... 102 3e-20 tr|Q3E8F5|Q3E8F5_ARATH Uncharacterized protein At5g47080.2 OS=Ar... 101 4e-20 tr|Q9FQF7|Q9FQF7_MAIZE Protein kinase CK2 regulatory subunit CK2... 101 5e-20 tr|B6SQ06|B6SQ06_MAIZE Casein kinase II subunit beta-4 OS=Zea ma... 101 5e-20 tr|B4FN07|B4FN07_MAIZE Putative uncharacterized protein OS=Zea m... 101 5e-20 tr|A8HPM0|A8HPM0_CHLRE Casein kinase 2 beta chain, CK2B (Fragmen... 99 2e-19 tr|Q9FQF6|Q9FQF6_MAIZE Protein kinase CK2 regulatory subunit CK2... 98 5e-19 tr|Q84VF5|Q84VF5_ORYSJ Possible protein kinase CK2 regulatory su... 98 5e-19 tr|Q84RS4|Q84RS4_ORYSJ Os07g0495100 protein OS=Oryza sativa subs... 98 5e-19 tr|B8B6D0|B8B6D0_ORYSI Putative uncharacterized protein OS=Oryza... 98 5e-19 tr|B6TNU8|B6TNU8_MAIZE Casein kinase II subunit beta-4 OS=Zea ma... 98 5e-19 tr|B6TIH0|B6TIH0_MAIZE Casein kinase II subunit beta-4 OS=Zea ma... 98 5e-19 tr|B6TGH2|B6TGH2_MAIZE Casein kinase II subunit beta-4 OS=Zea ma... 98 5e-19
>tr|A9T768|A9T768_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_59578 PE=4 SV=1 Length = 298
Score = 142 bits (359), Expect = 1e-32 Identities = 76/143 (53%), Positives = 92/143 (64%), Gaps = 2/143 (1%) Frame = +2
Query: 239 RESIDAKKRIEETLERTSPSTSKGN-AREKDRVSMVPAST-GRRLGSVDLRPTFDKTKYA 412 R+ D KKR+E+ ++++SPSTS+G REKDR++ A+T RR + RPT +K KY Sbjct: 26 RDVTDNKKRLEDGIDKSSPSTSRGGIGREKDRIAAPAATTQSRRNAGHETRPTMEKAKYP 85
Query: 413 XXXXXXXXXXXXXXXXXXXXXXXXXXXXFCGLRGNEFFCEVDDEYIQDDFNLSGLSSQVP 592 FC LRGNEFFCEVDDEYIQDDFNLSGLSSQVP Sbjct: 86 EDAEDSESESEDSDVSASDGEDTSWISWFCSLRGNEFFCEVDDEYIQDDFNLSGLSSQVP 145
Query: 593 YYEYALDLILDAESPNVDMLTDE 661 YY+YALDLILD ESP+ DMLT+E Sbjct: 146 YYDYALDLILDVESPSDDMLTEE 168
>tr|A9T5Q0|A9T5Q0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_219176 PE=4 SV=1 Length = 299
Score = 126 bits (316), Expect = 1e-27 Identities = 75/146 (51%), Positives = 87/146 (59%), Gaps = 5/146 (3%) Frame = +2
Query: 239 RESIDAKKRIEETLERTSP-STSKGN-AREKDRVSMVPASTGR-RLGSVDLRPTFDKTKY 409 R+ D KKR E + P STSKG REKDR++ + T R +++ RPT +K KY Sbjct: 24 RDVTDNKKRFEGGIPLLQPPSTSKGLIGREKDRIAAAASKTQTSRNAALEARPTLEKAKY 83
Query: 410 AXXXXXXXXXXXXXXXXXXXXXXXXXXXX--FCGLRGNEFFCEVDDEYIQDDFNLSGLSS 583 FCGLRGNEFFCEVDDEYIQDDFNLSGLSS Sbjct: 84 PEDVAAEDSESESEDSDVSASDGEDTSWISWFCGLRGNEFFCEVDDEYIQDDFNLSGLSS 143
Query: 584 QVPYYEYALDLILDAESPNVDMLTDE 661 QVPYY+YALDLILD ESP+ DMLT+E Sbjct: 144 QVPYYDYALDLILDVESPSDDMLTEE 169
>tr|B8LPQ3|B8LPQ3_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 297
Score = 116 bits (290), Expect = 1e-24 Identities = 70/142 (49%), Positives = 79/142 (55%), Gaps = 7/142 (4%) Frame = +2
Query: 257 KKRIEETL------ERTSPSTSKGNAREKDRVSMVPASTGRRL-GSVDLRPTFDKTKYAX 415 +KRI + L E++ PSTSKG R+S+ S GRR G DKT YA Sbjct: 29 RKRINDALDKHLHLEKSPPSTSKGL---NGRLSIPSTSAGRRAPGDSRNASALDKTNYAE 85
Query: 416 XXXXXXXXXXXXXXXXXXXXXXXXXXXFCGLRGNEFFCEVDDEYIQDDFNLSGLSSQVPY 595 FC LRGNEFFCEVDDEYIQDDFNL GLSSQVPY Sbjct: 86 DVEDSDTDSEESDVSGSDGDDTSWISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPY 145
Query: 596 YEYALDLILDAESPNVDMLTDE 661 Y+YALDLILD ES N D+LT+E Sbjct: 146 YDYALDLILDVESSNDDILTEE 167
>tr|A9RL84|A9RL84_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_116155 PE=4 SV=1 Length = 249
Score = 112 bits (281), Expect = 2e-23 Identities = 64/135 (47%), Positives = 85/135 (62%), Gaps = 1/135 (0%) Frame = +2
Query: 260 KRIEETLERTSPSTSKG-NAREKDRVSMVPASTGRRLGSVDLRPTFDKTKYAXXXXXXXX 436 KR+++ +E++S STSKG +EKDR++ A+T + L + DL +++ + Sbjct: 2 KRLDDGIEKSSASTSKGWIGKEKDRLAPAAAAT-QILVAEDLESESEESDVSGSDGEDTA 60
Query: 437 XXXXXXXXXXXXXXXXXXXXFCGLRGNEFFCEVDDEYIQDDFNLSGLSSQVPYYEYALDL 616 FCGLRGNEFFCE+DDEYIQDDFNLSGL SQVPYY+YALDL Sbjct: 61 WISW----------------FCGLRGNEFFCEIDDEYIQDDFNLSGLRSQVPYYDYALDL 104
Query: 617 ILDAESPNVDMLTDE 661 ILD E P+ D+LT+E Sbjct: 105 ILDVEPPSDDILTEE 119
>tr|A7PK61|A7PK61_VITVI Chromosome chr15 scaffold_19, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00019032001 PE=4 SV=1 Length = 288
Score = 110 bits (276), Expect = 6e-23 Identities = 64/135 (47%), Positives = 82/135 (60%), Gaps = 3/135 (2%) Frame = +2
Query: 266 IEETLERTSPSTSKG-NAREKDRVSMVPASTGRRLGSVDLRPTFDKT--KYAXXXXXXXX 436 +++ LE++SPSTSKG ++++K+R+S+ S G+ +D R T + K Sbjct: 28 LDKHLEKSSPSTSKGLSSKDKERLSVPSTSAGK--SQLDHRDTRAASLPKNKCSDEESET 85
Query: 437 XXXXXXXXXXXXXXXXXXXXFCGLRGNEFFCEVDDEYIQDDFNLSGLSSQVPYYEYALDL 616 FC LRGNEFFCEVDDEYIQDDFNL GLSSQVPYY+YALDL Sbjct: 86 DSEESDVSGSDGDDTSWISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPYYDYALDL 145
Query: 617 ILDAESPNVDMLTDE 661 ILD ES + DM T+E Sbjct: 146 ILDVESSHGDMFTEE 160
>tr|A9PJM8|A9PJM8_POPJC Putative uncharacterized protein OS=Populus jackii PE=2 SV=1 Length = 330
Score = 108 bits (269), Expect = 4e-22 Identities = 64/144 (44%), Positives = 82/144 (56%), Gaps = 12/144 (8%) Frame = +2
Query: 266 IEETLERTSPSTSKG---NAREKDRVSMVPASTGRRLGS---------VDLRPTFDKTKY 409 +++ LE++SPSTS+G ++++K+R+S+ STG+ L D R +K Sbjct: 31 LDKHLEKSSPSTSRGLNNSSKDKERLSVPSTSTGKSLQHHQQQLDHHRADSRSA-SLSKN 89
Query: 410 AXXXXXXXXXXXXXXXXXXXXXXXXXXXXFCGLRGNEFFCEVDDEYIQDDFNLSGLSSQV 589 FC LRGNEFFCEVDDEYIQDDFNL GLSSQV Sbjct: 90 KCSDEESETDSEESDVSGSDGDDTSWISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQV 149
Query: 590 PYYEYALDLILDAESPNVDMLTDE 661 PYY+YALDLILD ES + DM T+E Sbjct: 150 PYYDYALDLILDVESSHGDMFTEE 173
>tr|Q9FQF8|Q9FQF8_MAIZE Protein kinase CK2 regulatory subunit CK2B1 (Putative uncharacterized protein) OS=Zea mays PE=2 SV=1 Length = 276
Score = 107 bits (266), Expect = 9e-22 Identities = 63/137 (45%), Positives = 77/137 (56%), Gaps = 2/137 (1%) Frame = +2
Query: 257 KKRIEETLERTSPSTSKG--NAREKDRVSMVPASTGRRLGSVDLRPTFDKTKYAXXXXXX 430 +KRI E ++R+SPSTS G REK+R+ + R G + K A Sbjct: 16 RKRIGEPMDRSSPSTSWGFSGGREKERIGVGKQPEMPRSGGGSTAMSKSKLSDAESETDS 75
Query: 431 XXXXXXXXXXXXXXXXXXXXXXFCGLRGNEFFCEVDDEYIQDDFNLSGLSSQVPYYEYAL 610 FC L+GNEFFCEVDD+YIQDDFNL GLS+QVPYY+YAL Sbjct: 76 EESDVSGSDGEDTSWISW----FCSLKGNEFFCEVDDDYIQDDFNLCGLSNQVPYYDYAL 131
Query: 611 DLILDAESPNVDMLTDE 661 DLILD ES + DMLT+E Sbjct: 132 DLILDVESSHGDMLTEE 148
>tr|B6T9Z0|B6T9Z0_MAIZE Casein kinase II subunit beta-4 OS=Zea mays PE=2 SV=1 Length = 275
Score = 106 bits (264), Expect = 1e-21 Identities = 63/137 (45%), Positives = 78/137 (56%), Gaps = 2/137 (1%) Frame = +2
Query: 257 KKRIEETLERTSPSTSKG--NAREKDRVSMVPASTGRRLGSVDLRPTFDKTKYAXXXXXX 430 +KRI E ++R+SPSTS G REK+R+ + R G K+K + Sbjct: 16 RKRIGEPMDRSSPSTSWGFSGGREKERIGVGKQPEMPRSGGGST--AMSKSKLSDESETD 73
Query: 431 XXXXXXXXXXXXXXXXXXXXXXFCGLRGNEFFCEVDDEYIQDDFNLSGLSSQVPYYEYAL 610 FC L+GNEFFCEVDD+YIQDDFNL GLS+QVPYY+YAL Sbjct: 74 SEESDVSGSDGEDTSWISW---FCSLKGNEFFCEVDDDYIQDDFNLCGLSNQVPYYDYAL 130
Query: 611 DLILDAESPNVDMLTDE 661 DLILD ES + DMLT+E Sbjct: 131 DLILDVESSHGDMLTEE 147
>tr|Q9AY38|Q9AY38_ORYSA Putative casein kinase II beta subunit OS=Oryza sativa GN=OSJNBa0027P10.8 PE=4 SV=1 Length = 280
Score = 105 bits (263), Expect = 2e-21 Identities = 61/135 (45%), Positives = 78/135 (57%) Frame = +2
Query: 257 KKRIEETLERTSPSTSKGNAREKDRVSMVPASTGRRLGSVDLRPTFDKTKYAXXXXXXXX 436 K +E+ L+R+SPSTS+G A K+R + A+ G +L + P K + Sbjct: 23 KDVLEKHLDRSSPSTSRGAAVAKERDRL--AAAGGKLPA----PLGKAGKVSDGAEEFET 76
Query: 437 XXXXXXXXXXXXXXXXXXXXFCGLRGNEFFCEVDDEYIQDDFNLSGLSSQVPYYEYALDL 616 FC LRGNEFFCE+DD+YIQDDFNL GLS+QVPYY+YALDL Sbjct: 77 DSEDSDVSGSEGEDTSWISWFCSLRGNEFFCEIDDDYIQDDFNLCGLSNQVPYYDYALDL 136
Query: 617 ILDAESPNVDMLTDE 661 ILD ES N D+ T+E Sbjct: 137 ILDIESSNGDVFTEE 151
>tr|Q336R5|Q336R5_ORYSJ Casein kinase II beta-4 subunit, putative, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os10g41520 PE=4 SV=2 Length = 280
Score = 105 bits (263), Expect = 2e-21 Identities = 61/135 (45%), Positives = 78/135 (57%) Frame = +2
Query: 257 KKRIEETLERTSPSTSKGNAREKDRVSMVPASTGRRLGSVDLRPTFDKTKYAXXXXXXXX 436 K +E+ L+R+SPSTS+G A K+R + A+ G +L + P K + Sbjct: 23 KDVLEKHLDRSSPSTSRGAAVAKERDRL--AAAGGKLPA----PLGKAGKVSDGAEEFET 76
Query: 437 XXXXXXXXXXXXXXXXXXXXFCGLRGNEFFCEVDDEYIQDDFNLSGLSSQVPYYEYALDL 616 FC LRGNEFFCE+DD+YIQDDFNL GLS+QVPYY+YALDL Sbjct: 77 DSEDSDVSGSEGEDTSWISWFCSLRGNEFFCEIDDDYIQDDFNLCGLSNQVPYYDYALDL 136
Query: 617 ILDAESPNVDMLTDE 661 ILD ES N D+ T+E Sbjct: 137 ILDIESSNGDVFTEE 151
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