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NBDC - LSDB Archive
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DK957733
Clone id TST39A01NGRL0029_C08
Library
Length 571
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0029_C08. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
ATTATAAGGCAACCGGGGACGCCCACATTACAGTTGGGTTCTTTGGGCTGAGCACTGCAA
ACACTCATATATACAGATATTCATCCACCTCACGCTCGGCTTAAAATCTTTATCTCCATT
CCAGATCCAGTTGAATTGGTACCATCTCCGATCGAGGGCTGCATTTGGGGCAGGTGAGAT
TTGCTCAAGCTCAGCGGCTATGGCTTTCGCAGGAACCCAGCAAAAGTGCAAGGCCTGCGG
CAAGACCGTGTACGTGGTGGATCAGCTCACCGCAGATAACGTGGTGTATCATAAGGCTTG
CTTTCGATGCCACCATTGCAATGGCACCCTCAAGTTGAGTAACTACTCTTCATTTGAGGG
AACATTATATTGCAAGCCCCACTTTGATCAATTGTTCAAAAGGACTGGAAGTCTTGACAA
GAGCTTTGAGTCAGGTGTTCCAAAAACCCCCAAATCTGTGGACAGAGGTTTTGATGGTGA
ATCGAAAACGCCCACAAAGTTTGCATCAATCTTTTCTGGGACACAGGAAAAGTGCTTGGC
TTGCGGAAAGACTGTTTATCCGATCGAAAAG
■■Homology search results ■■ -
sp_hit_id P29675
Definition sp|P29675|SF3_HELAN Pollen-specific protein SF3 OS=Helianthus annuus
Align length 123
Score (bit) 161.0
E-value 2.0e-39
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK957733|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0029_C08, 5'
         (571 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P29675|SF3_HELAN Pollen-specific protein SF3 OS=Helianthus an...   161   2e-39
sp|Q4U4S6|XIRP2_MOUSE Xin actin-binding repeat-containing protei...    93   1e-18
sp|Q1LZA7|LIMD2_BOVIN LIM domain-containing protein 2 OS=Bos tau...    88   3e-17
sp|Q9BT23|LIMD2_HUMAN LIM domain-containing protein 2 OS=Homo sa...    88   3e-17
sp|Q4KM31|LIMD2_RAT LIM domain-containing protein 2 OS=Rattus no...    87   4e-17
sp|Q8BGB5|LIMD2_MOUSE LIM domain-containing protein 2 OS=Mus mus...    87   4e-17
sp|Q9ERG0|LIMA1_MOUSE LIM domain and actin-binding protein 1 OS=...    87   8e-17
sp|Q9UHB6|LIMA1_HUMAN LIM domain and actin-binding protein 1 OS=...    86   2e-16
sp|O60952|LIME_DICDI LIM domain-containing protein E OS=Dictyost...    70   7e-12
sp|P50461|CSRP3_HUMAN Cysteine and glycine-rich protein 3 OS=Hom...    67   6e-11
sp|Q4U0T9|CSRP3_BOVIN Cysteine and glycine-rich protein 3 OS=Bos...    66   1e-10
sp|P50463|CSRP3_RAT Cysteine and glycine-rich protein 3 OS=Rattu...    66   1e-10
sp|P50462|CSRP3_MOUSE Cysteine and glycine-rich protein 3 OS=Mus...    65   2e-10
sp|Q16527|CSRP2_HUMAN Cysteine and glycine-rich protein 2 OS=Hom...    65   3e-10
sp|Q32LE9|CSRP2_BOVIN Cysteine and glycine-rich protein 2 OS=Bos...    65   3e-10
sp|Q62908|CSRP2_RAT Cysteine and glycine-rich protein 2 OS=Rattu...    64   5e-10
sp|Q0VFX8|CRIP2_BOVIN Cysteine-rich protein 2 OS=Bos taurus GN=C...    64   5e-10
sp|Q05158|CSRP2_COTJA Cysteine and glycine-rich protein 2 OS=Cot...    64   7e-10
sp|P50460|CSRP2_CHICK Cysteine and glycine-rich protein 2 OS=Gal...    64   7e-10
sp|P97314|CSRP2_MOUSE Cysteine and glycine-rich protein 2 OS=Mus...    63   9e-10
sp|Q9BIW5|LIMC_DICDI LIM domain-containing protein C OS=Dictyost...    63   1e-09
sp|Q8BML1|MICA2_MOUSE Protein MICAL-2 OS=Mus musculus GN=Mical2 ...    62   3e-09
sp|Q8VDP3|MICA1_MOUSE NEDD9-interacting protein with calponin ho...    62   3e-09
sp|Q7RTP6|MICA3_HUMAN Protein MICAL-3 OS=Homo sapiens GN=MICAL3 ...    61   5e-09
sp|O94851|MICA2_HUMAN Protein MICAL-2 OS=Homo sapiens GN=MICAL2 ...    60   8e-09
sp|Q8TDZ2|MICA1_HUMAN NEDD9-interacting protein with calponin ho...    60   1e-08
sp|P34416|LASP1_CAEEL LIM and SH3 domain protein F42H10.3 OS=Cae...    59   1e-08
sp|P36201|CRIP2_RAT Cysteine-rich protein 2 OS=Rattus norvegicus...    59   1e-08
sp|Q9DCT8|CRIP2_MOUSE Cysteine-rich protein 2 OS=Mus musculus GN...    59   1e-08
sp|Q9BIW4|LIMD_DICDI LIM domain-containing protein D OS=Dictyost...    59   2e-08

>sp|P29675|SF3_HELAN Pollen-specific protein SF3 OS=Helianthus
           annuus GN=SF3 PE=2 SV=1
          Length = 219

 Score =  161 bits (408), Expect = 2e-39
 Identities = 74/123 (60%), Positives = 94/123 (76%)
 Frame = +2

Query: 203 AFAGTQQKCKACGKTVYVVDQLTADNVVYHKACFRCHHCNGTLKLSNYSSFEGTLYCKPH 382
           +F GT QKC  C KTVY+VD+L A+  VYHKACFRCHHCN TLKLSN++SF+G +YC+ H
Sbjct: 3   SFTGTTQKCTVCEKTVYLVDKLVANQRVYHKACFRCHHCNSTLKLSNFNSFDGVVYCRHH 62

Query: 383 FDQLFKRTGSLDKSFESGVPKTPKSVDRGFDGESKTPTKFASIFSGTQEKCLACGKTVYP 562
           FDQLFKRTGSL+KSF+ G PK     +R F  E+++  + +S F GT++KC AC K VYP
Sbjct: 63  FDQLFKRTGSLEKSFD-GTPKF--KPERTFSQETQSANRLSSFFEGTRDKCNACAKIVYP 119

Query: 563 IEK 571
           IE+
Sbjct: 120 IER 122



 Score = 81.3 bits (199), Expect = 3e-15
 Identities = 34/69 (49%), Positives = 45/69 (65%)
 Frame = +2

Query: 206 FAGTQQKCKACGKTVYVVDQLTADNVVYHKACFRCHHCNGTLKLSNYSSFEGTLYCKPHF 385
           F GT+ KC AC K VY ++++  D   YH+ACF+C H   T+  SNY + EG LYCK H 
Sbjct: 103 FEGTRDKCNACAKIVYPIERVKVDGTAYHRACFKCCHGGCTISPSNYIAHEGRLYCKHHH 162

Query: 386 DQLFKRTGS 412
            QLFK+ G+
Sbjct: 163 IQLFKKKGN 171


>sp|Q4U4S6|XIRP2_MOUSE Xin actin-binding repeat-containing protein 2
            OS=Mus musculus GN=Xirp2 PE=1 SV=1
          Length = 3784

 Score = 92.8 bits (229), Expect = 1e-18
 Identities = 39/75 (52%), Positives = 50/75 (66%)
 Frame = +2

Query: 203  AFAGTQQKCKACGKTVYVVDQLTADNVVYHKACFRCHHCNGTLKLSNYSSFEGTLYCKPH 382
            AF   ++ C  C KTVY ++ L AD   +HK+CFRCHHC+  L L NY+S  G +YCKPH
Sbjct: 3249 AFLSDKEICIICQKTVYPMECLIADKQNFHKSCFRCHHCSSKLSLGNYASLHGRIYCKPH 3308

Query: 383  FDQLFKRTGSLDKSF 427
            F QLFK  G+ D+ F
Sbjct: 3309 FKQLFKSKGNYDEGF 3323


>sp|Q1LZA7|LIMD2_BOVIN LIM domain-containing protein 2 OS=Bos taurus
           GN=LIMD2 PE=2 SV=1
          Length = 128

 Score = 88.2 bits (217), Expect = 3e-17
 Identities = 39/95 (41%), Positives = 57/95 (60%), Gaps = 3/95 (3%)
 Frame = +2

Query: 152 SRAAFGAGEICSSSAAMAF---AGTQQKCKACGKTVYVVDQLTADNVVYHKACFRCHHCN 322
           S  A G G   +   + +F   A  ++ C AC KTVY +++L AD +++H +CF C HC+
Sbjct: 13  SHEAKGGGSSSTVQRSKSFSLRAQVKETCAACQKTVYPMERLVADKLIFHSSCFCCKHCH 72

Query: 323 GTLKLSNYSSFEGTLYCKPHFDQLFKRTGSLDKSF 427
             L L +Y++  G  YCKPHF QLFK  G+ D+ F
Sbjct: 73  TKLSLGSYAALHGEFYCKPHFQQLFKSKGNYDEGF 107



 Score = 30.0 bits (66), Expect = 8.5
 Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
 Frame = +2

Query: 446 TPKSVDRGFDGESKTP--TKFASIFSGTQEKCLACGKTVYPIEK 571
           TP    +G  G S T   +K  S+ +  +E C AC KTVYP+E+
Sbjct: 11  TPSHEAKG-GGSSSTVQRSKSFSLRAQVKETCAACQKTVYPMER 53


>sp|Q9BT23|LIMD2_HUMAN LIM domain-containing protein 2 OS=Homo
           sapiens GN=LIMD2 PE=2 SV=1
          Length = 127

 Score = 87.8 bits (216), Expect = 3e-17
 Identities = 36/87 (41%), Positives = 54/87 (62%)
 Frame = +2

Query: 167 GAGEICSSSAAMAFAGTQQKCKACGKTVYVVDQLTADNVVYHKACFRCHHCNGTLKLSNY 346
           G+  +  S +    A  ++ C AC KTVY +++L AD +++H +CF C HC+  L L +Y
Sbjct: 20  GSSTVQRSKSFSLRAQVKETCAACQKTVYPMERLVADKLIFHNSCFCCKHCHTKLSLGSY 79

Query: 347 SSFEGTLYCKPHFDQLFKRTGSLDKSF 427
           ++  G  YCKPHF QLFK  G+ D+ F
Sbjct: 80  AALHGEFYCKPHFQQLFKSKGNYDEGF 106



 Score = 31.6 bits (70), Expect = 2.9
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = +2

Query: 446 TPKSVDRGFDGESKTPTKFASIFSGTQEKCLACGKTVYPIEK 571
           TP    +G    +   +K  S+ +  +E C AC KTVYP+E+
Sbjct: 11  TPSHDAKGGGSSTVQRSKSFSLRAQVKETCAACQKTVYPMER 52


>sp|Q4KM31|LIMD2_RAT LIM domain-containing protein 2 OS=Rattus
           norvegicus GN=Limd2 PE=2 SV=1
          Length = 128

 Score = 87.4 bits (215), Expect = 4e-17
 Identities = 36/92 (39%), Positives = 56/92 (60%)
 Frame = +2

Query: 152 SRAAFGAGEICSSSAAMAFAGTQQKCKACGKTVYVVDQLTADNVVYHKACFRCHHCNGTL 331
           ++ + G   +  S +    A  ++ C AC KTVY +++L AD +++H +CF C HC+  L
Sbjct: 16  AKGSSGNSTVQRSKSFSLRAQVKETCAACQKTVYPMERLVADKLIFHNSCFCCKHCHTKL 75

Query: 332 KLSNYSSFEGTLYCKPHFDQLFKRTGSLDKSF 427
            L +Y++  G  YCKPHF QLFK  G+ D+ F
Sbjct: 76  SLGSYAAMHGEFYCKPHFQQLFKSKGNYDEGF 107



 Score = 32.7 bits (73), Expect = 1.3
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = +2

Query: 446 TPKSVDRGFDGESKTP-TKFASIFSGTQEKCLACGKTVYPIEK 571
           TP    +G  G S    +K  S+ +  +E C AC KTVYP+E+
Sbjct: 11  TPSHEAKGSSGNSTVQRSKSFSLRAQVKETCAACQKTVYPMER 53


>sp|Q8BGB5|LIMD2_MOUSE LIM domain-containing protein 2 OS=Mus
           musculus GN=Limd2 PE=2 SV=1
          Length = 128

 Score = 87.4 bits (215), Expect = 4e-17
 Identities = 35/92 (38%), Positives = 57/92 (61%)
 Frame = +2

Query: 152 SRAAFGAGEICSSSAAMAFAGTQQKCKACGKTVYVVDQLTADNVVYHKACFRCHHCNGTL 331
           ++ + G+  +  S +    A  ++ C AC KTVY +++L AD +++H +CF C HC+  L
Sbjct: 16  AKGSSGSSTVQRSKSFSLRAQVKETCAACQKTVYPMERLVADKLIFHNSCFCCKHCHTKL 75

Query: 332 KLSNYSSFEGTLYCKPHFDQLFKRTGSLDKSF 427
            L +Y++  G  YC+PHF QLFK  G+ D+ F
Sbjct: 76  SLGSYAAMHGEFYCRPHFQQLFKSKGNYDEGF 107



 Score = 32.7 bits (73), Expect = 1.3
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = +2

Query: 446 TPKSVDRGFDGESKTP-TKFASIFSGTQEKCLACGKTVYPIEK 571
           TP    +G  G S    +K  S+ +  +E C AC KTVYP+E+
Sbjct: 11  TPSHEAKGSSGSSTVQRSKSFSLRAQVKETCAACQKTVYPMER 53


>sp|Q9ERG0|LIMA1_MOUSE LIM domain and actin-binding protein 1 OS=Mus
           musculus GN=Lima1 PE=1 SV=2
          Length = 753

 Score = 86.7 bits (213), Expect = 8e-17
 Identities = 37/81 (45%), Positives = 52/81 (64%)
 Frame = +2

Query: 185 SSSAAMAFAGTQQKCKACGKTVYVVDQLTADNVVYHKACFRCHHCNGTLKLSNYSSFEGT 364
           S +A    A  ++ C  C KTVY +++L A+  V+H +CFRC +CN  L L  Y+S  G 
Sbjct: 374 SKTAKKFQAPAKESCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGR 433

Query: 365 LYCKPHFDQLFKRTGSLDKSF 427
           +YCKPHF+QLFK  G+ D+ F
Sbjct: 434 IYCKPHFNQLFKSKGNYDEGF 454


>sp|Q9UHB6|LIMA1_HUMAN LIM domain and actin-binding protein 1
           OS=Homo sapiens GN=LIMA1 PE=1 SV=1
          Length = 759

 Score = 85.5 bits (210), Expect = 2e-16
 Identities = 35/73 (47%), Positives = 49/73 (67%)
 Frame = +2

Query: 209 AGTQQKCKACGKTVYVVDQLTADNVVYHKACFRCHHCNGTLKLSNYSSFEGTLYCKPHFD 388
           A  ++ C  C KTVY +++L A+  V+H +CFRC +CN  L L  Y+S  G +YCKPHF+
Sbjct: 384 APARETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFN 443

Query: 389 QLFKRTGSLDKSF 427
           QLFK  G+ D+ F
Sbjct: 444 QLFKSKGNYDEGF 456


>sp|O60952|LIME_DICDI LIM domain-containing protein E
           OS=Dictyostelium discoideum GN=limE PE=1 SV=1
          Length = 199

 Score = 70.1 bits (170), Expect = 7e-12
 Identities = 33/82 (40%), Positives = 42/82 (51%)
 Frame = +2

Query: 224 KCKACGKTVYVVDQLTADNVVYHKACFRCHHCNGTLKLSNYSSFEGTLYCKPHFDQLFKR 403
           KC AC KT Y ++ + A+N  YHK CF+C  CN TL +  + SFEG LYC  H  ++   
Sbjct: 6   KCGACAKTAYPLESVVANNNSYHKGCFKCSTCNSTLNVKTFKSFEGKLYCPVHTPKV-SA 64

Query: 404 TGSLDKSFESGVPKTPKSVDRG 469
           T   D          PK V  G
Sbjct: 65  TAVTDSVALKNALNAPKKVAEG 86


>sp|P50461|CSRP3_HUMAN Cysteine and glycine-rich protein 3 OS=Homo
           sapiens GN=CSRP3 PE=1 SV=1
          Length = 194

 Score = 67.0 bits (162), Expect = 6e-11
 Identities = 43/135 (31%), Positives = 61/135 (45%), Gaps = 15/135 (11%)
 Frame = +2

Query: 212 GTQQKCKACGKTVYVVDQLTADNVVYHKACFRCHHCNGTLKLSNYSSFEGTLYCKPHFDQ 391
           G   KC AC KTVY  +++  +   +HK CF C  C   L  +  ++ E  +YCK  + +
Sbjct: 5   GGGAKCGACEKTVYHAEEIQCNGRSFHKTCFHCMACRKALDSTTVAAHESEIYCKVCYGR 64

Query: 392 LFKRTG----------SLDKSFESGV-----PKTPKSVDRGFDGESKTPTKFASIFSGTQ 526
            +   G          S D     G+     PK  +SV       +  P+KF + F G  
Sbjct: 65  RYGPKGIGYGQGAGCLSTDTGEHLGLQFQQSPKPARSV------TTSNPSKFTAKF-GES 117

Query: 527 EKCLACGKTVYPIEK 571
           EKC  CGK+VY  EK
Sbjct: 118 EKCPRCGKSVYAAEK 132



 Score = 59.3 bits (142), Expect = 1e-08
 Identities = 25/66 (37%), Positives = 38/66 (57%)
 Frame = +2

Query: 212 GTQQKCKACGKTVYVVDQLTADNVVYHKACFRCHHCNGTLKLSNYSSFEGTLYCKPHFDQ 391
           G  +KC  CGK+VY  +++      +HK CFRC  C  +L+ +N +  +G LYCK  + +
Sbjct: 115 GESEKCPRCGKSVYAAEKVMGGGKPWHKTCFRCAICGKSLESTNVTDKDGELYCKVCYAK 174

Query: 392 LFKRTG 409
            F  TG
Sbjct: 175 NFGPTG 180
tr_hit_id A9NNM5
Definition tr|A9NNM5|A9NNM5_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 124
Score (bit) 211.0
E-value 2.0e-53
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK957733|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0029_C08, 5'
         (571 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9NNM5|A9NNM5_PICSI Putative uncharacterized protein OS=Picea...   211   2e-53
tr|A9NSQ9|A9NSQ9_PICSI Putative uncharacterized protein OS=Picea...   207   3e-52
tr|B1PPU5|B1PPU5_PINTA LIM2 transcription factor (Fragment) OS=P...   202   8e-51
tr|B1PPT4|B1PPT4_PINPS LIM2 transcription factor (Fragment) OS=P...   202   8e-51
tr|A7PD59|A7PD59_VITVI Chromosome chr17 scaffold_12, whole genom...   198   2e-49
tr|Q94JX5|Q94JX5_ARATH Similar to transcription factor SF3 (Pir|...   189   9e-47
tr|Q306K1|Q306K1_BRANA LIM domain protein OS=Brassica napus GN=L...   189   9e-47
tr|A9PDY3|A9PDY3_POPTR Putative uncharacterized protein OS=Popul...   186   8e-46
tr|A0SVL3|A0SVL3_9ROSI LIM domain protein GLIM1b OS=Populus trem...   186   8e-46
tr|Q9XHG9|Q9XHG9_HELAN LIM domain protein WLIM-1 OS=Helianthus a...   186   1e-45
tr|Q8SBC9|Q8SBC9_POPKI Transcription factor LIM OS=Populus kitak...   185   1e-45
tr|Q8SBC8|Q8SBC8_POPKI Transcription factor LIM OS=Populus kitak...   185   1e-45
tr|Q56R05|Q56R05_SOLLC Putative pollen specific LIM domain-conta...   185   1e-45
tr|Q53J16|Q53J16_SOLLC Pollen-specific protein SF3, putative OS=...   185   1e-45
tr|Q9SP33|Q9SP33_HELAN LIM domain protein WLIM1 OS=Helianthus an...   185   2e-45
tr|Q59HI3|Q59HI3_EUCGL Transcription factor lim1 OS=Eucalyptus g...   184   3e-45
tr|Q59HI2|Q59HI2_EUCCA Transcription factor lim1 OS=Eucalyptus c...   184   3e-45
tr|B7FH07|B7FH07_MEDTR Putative uncharacterized protein OS=Medic...   184   4e-45
tr|A0SVL6|A0SVL6_9ROSI LIM domain protein WLIM1b OS=Populus trem...   183   5e-45
tr|A0SVL5|A0SVL5_9ROSI LIM domain protein WLIM1a OS=Populus trem...   183   5e-45
tr|Q9SY62|Q9SY62_ARATH F14N23.8 OS=Arabidopsis thaliana PE=4 SV=1     183   7e-45
tr|A9PAZ8|A9PAZ8_POPTR Putative uncharacterized protein OS=Popul...   183   7e-45
tr|A5BYE7|A5BYE7_VITVI Putative uncharacterized protein (Chromos...   183   7e-45
tr|A9PG33|A9PG33_POPTR Putative uncharacterized protein OS=Popul...   182   9e-45
tr|A9PB06|A9PB06_POPTR Putative uncharacterized protein OS=Popul...   182   9e-45
tr|Q9SNX4|Q9SNX4_TOBAC Pollen specific LIM domain protein 1a OS=...   182   1e-44
tr|A9SHN8|A9SHN8_PHYPA Predicted protein OS=Physcomitrella paten...   181   2e-44
tr|A0SVL2|A0SVL2_9ROSI LIM domain protein GLIM1a OS=Populus trem...   181   2e-44
tr|Q9SXJ0|Q9SXJ0_TOBAC Transcription factor Ntlim1 OS=Nicotiana ...   181   3e-44
tr|A7QL82|A7QL82_VITVI Chromosome chr3 scaffold_117, whole genom...   181   3e-44

>tr|A9NNM5|A9NNM5_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 187

 Score =  211 bits (537), Expect = 2e-53
 Identities = 101/124 (81%), Positives = 110/124 (88%)
 Frame = +2

Query: 200 MAFAGTQQKCKACGKTVYVVDQLTADNVVYHKACFRCHHCNGTLKLSNYSSFEGTLYCKP 379
           MAFAGTQQKCKAC KTVYVVDQLTAD  V+HKACFRCHHCNGTLKLSNYSSFEG LYCKP
Sbjct: 1   MAFAGTQQKCKACEKTVYVVDQLTADGSVFHKACFRCHHCNGTLKLSNYSSFEGVLYCKP 60

Query: 380 HFDQLFKRTGSLDKSFESGVPKTPKSVDRGFDGESKTPTKFASIFSGTQEKCLACGKTVY 559
           HFDQLFKRTGSLDKSFE G PK  K+ ++  DGE KTP++ +++FSGTQEKCLACG TVY
Sbjct: 61  HFDQLFKRTGSLDKSFE-GTPKAVKN-EKLNDGEIKTPSRVSALFSGTQEKCLACGNTVY 118

Query: 560 PIEK 571
           PIEK
Sbjct: 119 PIEK 122



 Score = 85.5 bits (210), Expect = 2e-15
 Identities = 40/81 (49%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
 Frame = +2

Query: 173 GEICSSSAAMA-FAGTQQKCKACGKTVYVVDQLTADNVVYHKACFRCHHCNGTLKLSNYS 349
           GEI + S   A F+GTQ+KC ACG TVY +++++ + V YHK CF+C H    +  SNY 
Sbjct: 91  GEIKTPSRVSALFSGTQEKCLACGNTVYPIEKVSVEGVGYHKQCFKCIHGGCVISPSNYI 150

Query: 350 SFEGTLYCKPHFDQLFKRTGS 412
           + EG LYCK H  QLFK  G+
Sbjct: 151 AIEGRLYCKHHHAQLFKEKGN 171


>tr|A9NSQ9|A9NSQ9_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 191

 Score =  207 bits (527), Expect = 3e-52
 Identities = 96/124 (77%), Positives = 111/124 (89%)
 Frame = +2

Query: 200 MAFAGTQQKCKACGKTVYVVDQLTADNVVYHKACFRCHHCNGTLKLSNYSSFEGTLYCKP 379
           MAFAGT QKCKAC KTVY+VDQLTADN VYHK+CFRCHHCNGTLKLSNYSSFEG LYCKP
Sbjct: 1   MAFAGTTQKCKACEKTVYLVDQLTADNSVYHKSCFRCHHCNGTLKLSNYSSFEGVLYCKP 60

Query: 380 HFDQLFKRTGSLDKSFESGVPKTPKSVDRGFDGESKTPTKFASIFSGTQEKCLACGKTVY 559
           HFDQLFKRTGSLDKSFE+ +P+  ++ D+  + ESKTP + +++FSGTQ+KC+ACGKTVY
Sbjct: 61  HFDQLFKRTGSLDKSFEA-IPRASRN-DKTQENESKTPNRVSTMFSGTQDKCVACGKTVY 118

Query: 560 PIEK 571
           PIEK
Sbjct: 119 PIEK 122



 Score = 81.3 bits (199), Expect = 4e-14
 Identities = 33/72 (45%), Positives = 46/72 (63%)
 Frame = +2

Query: 206 FAGTQQKCKACGKTVYVVDQLTADNVVYHKACFRCHHCNGTLKLSNYSSFEGTLYCKPHF 385
           F+GTQ KC ACGKTVY ++++  D   YH+ CF+C H    +  SNY + EG LYC+ H 
Sbjct: 103 FSGTQDKCVACGKTVYPIEKVAVDGTSYHRPCFKCCHGGCVISPSNYVAHEGRLYCRHHS 162

Query: 386 DQLFKRTGSLDK 421
            QLF+  G+  +
Sbjct: 163 SQLFREKGNFSQ 174


>tr|B1PPU5|B1PPU5_PINTA LIM2 transcription factor (Fragment)
           OS=Pinus taeda GN=LIM2 PE=4 SV=1
          Length = 122

 Score =  202 bits (515), Expect = 8e-51
 Identities = 92/124 (74%), Positives = 111/124 (89%)
 Frame = +2

Query: 200 MAFAGTQQKCKACGKTVYVVDQLTADNVVYHKACFRCHHCNGTLKLSNYSSFEGTLYCKP 379
           MAFAGT QKCKAC KTVY+VDQLTADN V+HK+CFRCHHCNGTLKLSNYSSFEG LYCKP
Sbjct: 1   MAFAGTTQKCKACEKTVYLVDQLTADNSVFHKSCFRCHHCNGTLKLSNYSSFEGVLYCKP 60

Query: 380 HFDQLFKRTGSLDKSFESGVPKTPKSVDRGFDGESKTPTKFASIFSGTQEKCLACGKTVY 559
           HFDQLFKRTGSLDKSF + +P+  ++ D+  + E++TP++ +++FSGTQ+KC+ACGKTVY
Sbjct: 61  HFDQLFKRTGSLDKSF-AAIPRASRN-DKMHENENRTPSRVSALFSGTQDKCVACGKTVY 118

Query: 560 PIEK 571
           PIEK
Sbjct: 119 PIEK 122



 Score = 35.8 bits (81), Expect = 1.7
 Identities = 14/26 (53%), Positives = 19/26 (73%)
 Frame = +2

Query: 188 SSAAMAFAGTQQKCKACGKTVYVVDQ 265
           S  +  F+GTQ KC ACGKTVY +++
Sbjct: 97  SRVSALFSGTQDKCVACGKTVYPIEK 122


>tr|B1PPT4|B1PPT4_PINPS LIM2 transcription factor (Fragment)
           OS=Pinus pinaster GN=LIM2 PE=4 SV=1
          Length = 182

 Score =  202 bits (515), Expect = 8e-51
 Identities = 92/124 (74%), Positives = 111/124 (89%)
 Frame = +2

Query: 200 MAFAGTQQKCKACGKTVYVVDQLTADNVVYHKACFRCHHCNGTLKLSNYSSFEGTLYCKP 379
           MAFAGT QKCKAC KTVY+VDQLTADN V+HK+CFRCHHCNGTLKLSNYSSFEG LYCKP
Sbjct: 1   MAFAGTTQKCKACEKTVYLVDQLTADNSVFHKSCFRCHHCNGTLKLSNYSSFEGVLYCKP 60

Query: 380 HFDQLFKRTGSLDKSFESGVPKTPKSVDRGFDGESKTPTKFASIFSGTQEKCLACGKTVY 559
           HFDQLFKRTGSLDKSF + +P+  ++ D+  + E++TP++ +++FSGTQ+KC+ACGKTVY
Sbjct: 61  HFDQLFKRTGSLDKSF-AAIPRASRN-DKMHENENRTPSRVSALFSGTQDKCVACGKTVY 118

Query: 560 PIEK 571
           PIEK
Sbjct: 119 PIEK 122



 Score = 82.0 bits (201), Expect = 2e-14
 Identities = 34/78 (43%), Positives = 48/78 (61%)
 Frame = +2

Query: 188 SSAAMAFAGTQQKCKACGKTVYVVDQLTADNVVYHKACFRCHHCNGTLKLSNYSSFEGTL 367
           S  +  F+GTQ KC ACGKTVY ++++  D   YH+ CF+C H    +  SNY + EG L
Sbjct: 97  SRVSALFSGTQDKCVACGKTVYPIEKVAVDGTSYHRPCFKCCHGGCVISPSNYVAHEGRL 156

Query: 368 YCKPHFDQLFKRTGSLDK 421
           YC+ H  QLF+  G+  +
Sbjct: 157 YCRHHSSQLFREKGNFSQ 174


>tr|A7PD59|A7PD59_VITVI Chromosome chr17 scaffold_12, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00016150001
           PE=4 SV=1
          Length = 182

 Score =  198 bits (503), Expect = 2e-49
 Identities = 95/122 (77%), Positives = 105/122 (86%)
 Frame = +2

Query: 206 FAGTQQKCKACGKTVYVVDQLTADNVVYHKACFRCHHCNGTLKLSNYSSFEGTLYCKPHF 385
           FAGT QKCKAC KTVY+VD+LTADN VYHKACFRCHHC GTLKLSNYSSFEG LYCKPHF
Sbjct: 4   FAGTTQKCKACEKTVYLVDELTADNKVYHKACFRCHHCKGTLKLSNYSSFEGVLYCKPHF 63

Query: 386 DQLFKRTGSLDKSFESGVPKTPKSVDRGFDGESKTPTKFASIFSGTQEKCLACGKTVYPI 565
           DQLFK TGSLDKSFE G PKT +SVD+G     +T +K +S+F+GTQEKC+AC KTVYPI
Sbjct: 64  DQLFKMTGSLDKSFE-GAPKTVRSVDQG-----QTNSKVSSMFAGTQEKCVACKKTVYPI 117

Query: 566 EK 571
           EK
Sbjct: 118 EK 119



 Score = 85.9 bits (211), Expect = 1e-15
 Identities = 38/79 (48%), Positives = 50/79 (63%)
 Frame = +2

Query: 185 SSSAAMAFAGTQQKCKACGKTVYVVDQLTADNVVYHKACFRCHHCNGTLKLSNYSSFEGT 364
           +S  +  FAGTQ+KC AC KTVY ++++  D   YHKACFRC H   T+  SNY + E  
Sbjct: 93  NSKVSSMFAGTQEKCVACKKTVYPIEKVGVDGTSYHKACFRCTHGGCTISPSNYIAHEHR 152

Query: 365 LYCKPHFDQLFKRTGSLDK 421
           LYC+ H  QLFK  G+  +
Sbjct: 153 LYCRHHHSQLFKEKGNFSQ 171


>tr|Q94JX5|Q94JX5_ARATH Similar to transcription factor SF3
           (Pir|IS37656) (Putative transcription factor)
           OS=Arabidopsis thaliana GN=At1g10200 PE=2 SV=1
          Length = 190

 Score =  189 bits (480), Expect = 9e-47
 Identities = 90/124 (72%), Positives = 101/124 (81%)
 Frame = +2

Query: 200 MAFAGTQQKCKACGKTVYVVDQLTADNVVYHKACFRCHHCNGTLKLSNYSSFEGTLYCKP 379
           MAFAGT QKC AC KTVY+VD+LTADN VYHKACFRCHHC GTLKLSNY+SFEG LYC+P
Sbjct: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60

Query: 380 HFDQLFKRTGSLDKSFESGVPKTPKSVDRGFDGESKTPTKFASIFSGTQEKCLACGKTVY 559
           HFDQ FKRTGSL+KSFE G PK  K  DR  +GE    TK +++F GT+EKC+ C KTVY
Sbjct: 61  HFDQNFKRTGSLEKSFE-GTPKIGKP-DRPLEGERPAGTKVSNMFGGTREKCVGCDKTVY 118

Query: 560 PIEK 571
           PIEK
Sbjct: 119 PIEK 122



 Score = 80.5 bits (197), Expect = 6e-14
 Identities = 33/72 (45%), Positives = 48/72 (66%)
 Frame = +2

Query: 206 FAGTQQKCKACGKTVYVVDQLTADNVVYHKACFRCHHCNGTLKLSNYSSFEGTLYCKPHF 385
           F GT++KC  C KTVY +++++ +  +YHK+CF+C H   T+  SNY + EG LYCK H 
Sbjct: 103 FGGTREKCVGCDKTVYPIEKVSVNGTLYHKSCFKCTHGGCTISPSNYIAHEGKLYCKHHH 162

Query: 386 DQLFKRTGSLDK 421
            QL K  G+L +
Sbjct: 163 IQLIKEKGNLSQ 174


>tr|Q306K1|Q306K1_BRANA LIM domain protein OS=Brassica napus GN=LIM
           PE=2 SV=1
          Length = 189

 Score =  189 bits (480), Expect = 9e-47
 Identities = 90/124 (72%), Positives = 101/124 (81%)
 Frame = +2

Query: 200 MAFAGTQQKCKACGKTVYVVDQLTADNVVYHKACFRCHHCNGTLKLSNYSSFEGTLYCKP 379
           MAFAGT QKC AC KTVY+VD+LTADN VYHKACFRCHHC GTLKLSNY+SFEG LYC+P
Sbjct: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGALYCRP 60

Query: 380 HFDQLFKRTGSLDKSFESGVPKTPKSVDRGFDGESKTPTKFASIFSGTQEKCLACGKTVY 559
           HFDQ FKRTGSL+KSFE G PK  K  DR  +GE    TK +++F GT+EKC+ C KTVY
Sbjct: 61  HFDQNFKRTGSLEKSFE-GTPKIGKP-DRPLEGERPAGTKVSNMFGGTREKCVGCDKTVY 118

Query: 560 PIEK 571
           PIEK
Sbjct: 119 PIEK 122



 Score = 80.9 bits (198), Expect = 5e-14
 Identities = 37/86 (43%), Positives = 52/86 (60%)
 Frame = +2

Query: 206 FAGTQQKCKACGKTVYVVDQLTADNVVYHKACFRCHHCNGTLKLSNYSSFEGTLYCKPHF 385
           F GT++KC  C KTVY +++++ +  +YHK+CF+C H   T+  SNY + EG LYCK H 
Sbjct: 103 FGGTREKCVGCDKTVYPIEKVSVNGTLYHKSCFKCTHGGCTISPSNYIAHEGKLYCKHHH 162

Query: 386 DQLFKRTGSLDKSFESGVPKTPKSVD 463
            QL K  G+L +  E G       VD
Sbjct: 163 IQLIKEKGNLSQ-LEGGDNAAKDKVD 187


>tr|A9PDY3|A9PDY3_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 196

 Score =  186 bits (472), Expect = 8e-46
 Identities = 86/123 (69%), Positives = 101/123 (82%)
 Frame = +2

Query: 203 AFAGTQQKCKACGKTVYVVDQLTADNVVYHKACFRCHHCNGTLKLSNYSSFEGTLYCKPH 382
           AFAGTQQKC AC KTVY+VD+LTADN +YHKACFRCHHC GTLKLSNYSSFEG LYC+PH
Sbjct: 3   AFAGTQQKCMACDKTVYLVDKLTADNRIYHKACFRCHHCRGTLKLSNYSSFEGVLYCRPH 62

Query: 383 FDQLFKRTGSLDKSFESGVPKTPKSVDRGFDGESKTPTKFASIFSGTQEKCLACGKTVYP 562
           +DQLFKRTGSLDKSFE     TPK V      +++  +K +++F+GT+EKC+ C KTVYP
Sbjct: 63  YDQLFKRTGSLDKSFEG----TPKIVKPEKPVDNENASKVSNLFAGTREKCVGCNKTVYP 118

Query: 563 IEK 571
           IEK
Sbjct: 119 IEK 121



 Score = 84.7 bits (208), Expect = 3e-15
 Identities = 39/93 (41%), Positives = 58/93 (62%)
 Frame = +2

Query: 185 SSSAAMAFAGTQQKCKACGKTVYVVDQLTADNVVYHKACFRCHHCNGTLKLSNYSSFEGT 364
           +S  +  FAGT++KC  C KTVY ++++T +   YH++CF+C H   T+  SNY + EG 
Sbjct: 95  ASKVSNLFAGTREKCVGCNKTVYPIEKVTVNGTQYHRSCFKCTHGGCTISPSNYIAHEGK 154

Query: 365 LYCKPHFDQLFKRTGSLDKSFESGVPKTPKSVD 463
           LYCK H  QLFK  G+  +  E+   K P +V+
Sbjct: 155 LYCKHHHIQLFKEKGNYSQ-LENEREKNPVTVN 186


>tr|A0SVL3|A0SVL3_9ROSI LIM domain protein GLIM1b OS=Populus tremula
           x Populus alba GN=GLIM1b PE=2 SV=1
          Length = 196

 Score =  186 bits (472), Expect = 8e-46
 Identities = 88/123 (71%), Positives = 103/123 (83%)
 Frame = +2

Query: 203 AFAGTQQKCKACGKTVYVVDQLTADNVVYHKACFRCHHCNGTLKLSNYSSFEGTLYCKPH 382
           AFAGTQQKC AC KTVY+VD+LTADN +YHKACFRCHHC GTLKLSNYSSFEG LYC+PH
Sbjct: 3   AFAGTQQKCMACDKTVYLVDKLTADNRIYHKACFRCHHCRGTLKLSNYSSFEGVLYCRPH 62

Query: 383 FDQLFKRTGSLDKSFESGVPKTPKSVDRGFDGESKTPTKFASIFSGTQEKCLACGKTVYP 562
           +DQLFKRTGSLDKSFE G PK  K  ++  D E+   +K +++F+GT+EKC+ C KTVYP
Sbjct: 63  YDQLFKRTGSLDKSFE-GTPKIAKP-EKPVDNEN--ASKVSNLFAGTREKCVGCNKTVYP 118

Query: 563 IEK 571
           IEK
Sbjct: 119 IEK 121



 Score = 83.6 bits (205), Expect = 7e-15
 Identities = 39/93 (41%), Positives = 57/93 (61%)
 Frame = +2

Query: 185 SSSAAMAFAGTQQKCKACGKTVYVVDQLTADNVVYHKACFRCHHCNGTLKLSNYSSFEGT 364
           +S  +  FAGT++KC  C KTVY ++++T +   YH+ CF+C H   T+  SNY + EG 
Sbjct: 95  ASKVSNLFAGTREKCVGCNKTVYPIEKVTVNGTPYHRRCFKCTHGGCTVSPSNYIAHEGK 154

Query: 365 LYCKPHFDQLFKRTGSLDKSFESGVPKTPKSVD 463
           LYCK H  QLFK  G+  +  E+   K P +V+
Sbjct: 155 LYCKHHHIQLFKEKGNYSQ-LENEREKNPVTVN 186


>tr|Q9XHG9|Q9XHG9_HELAN LIM domain protein WLIM-1 OS=Helianthus
           annuus GN=WLIM-1 PE=4 SV=1
          Length = 188

 Score =  186 bits (471), Expect = 1e-45
 Identities = 88/124 (70%), Positives = 99/124 (79%)
 Frame = +2

Query: 200 MAFAGTQQKCKACGKTVYVVDQLTADNVVYHKACFRCHHCNGTLKLSNYSSFEGTLYCKP 379
           MAFAGT QKC AC KTVY+VD+LTADN V+HKACFRCHHCNGTLKLSNY+SFEG LYC+P
Sbjct: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVFHKACFRCHHCNGTLKLSNYNSFEGVLYCRP 60

Query: 380 HFDQLFKRTGSLDKSFESGVPKTPKSVDRGFDGESKTPTKFASIFSGTQEKCLACGKTVY 559
           HFDQLFK+TGSLDKSFE G PK  K   +  DGE     K +S+F GT++KCL C  TVY
Sbjct: 61  HFDQLFKKTGSLDKSFE-GTPKIVKQ-PKTIDGEKPMANKVSSMFVGTKDKCLGCKNTVY 118

Query: 560 PIEK 571
           P EK
Sbjct: 119 PTEK 122



 Score = 75.9 bits (185), Expect = 2e-12
 Identities = 31/79 (39%), Positives = 47/79 (59%)
 Frame = +2

Query: 185 SSSAAMAFAGTQQKCKACGKTVYVVDQLTADNVVYHKACFRCHHCNGTLKLSNYSSFEGT 364
           ++  +  F GT+ KC  C  TVY  ++++ +   YHK+CF+C H   T+  SNY + EG 
Sbjct: 96  ANKVSSMFVGTKDKCLGCKNTVYPTEKVSVNGTAYHKSCFKCSHGGCTISPSNYIAHEGH 155

Query: 365 LYCKPHFDQLFKRTGSLDK 421
           LYC+ H  QL K  G+L +
Sbjct: 156 LYCRHHHTQLIKEKGNLSQ 174