DK957748 |
Clone id |
TST39A01NGRL0029_C23 |
Library |
TST39 |
Length |
562 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0029_C23. 5' end sequence. |
Accession |
DK957748 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL866Contig1 |
Sequence |
TAGTTGGGCTCGATTCGGCGGCAGAGAGGCAAAGAGTGATTCAATGCCTGCGAGCCGCCA TAAATCGTCGCGTTACACAGGGCTTGAGACTTGACTTCTTTTTACATCATCGAGTGGGAC TTCTGTCGGACGTAACCCGGATTTTTAGGGAGCATGGGCTGTCTGTCACAAGAGCTGATG TCAACACCAAAGACAACAAGGCTATCAATGTGTTTTACGTCACTGATGCTGCAGGGAATG TTGTGGACCTGAAAGCAGTTGAAGCAGTGAGACAGTCAATAGGAAAAGCAGTTTTGCAAG TGAAAAGTCCACCTTCTGATTGCAATATTCCTTCCACAAAGGCAACCACATCATCAAAGT TGTCGATTGGCAGTTTGTTGTTGGGAATGCCTGCACAAGTTCTGTATAGTTTGGGGTTAA TCAAATCGTGTTCATGAAGATATATATCGTGCAGTGGTCATCTTCACGTTCATACATATG TACTATATGATTTGTTGTTCATAGTTTGCATATTTACCTGACTTCAGAAGAGGCTATCCC TCATCTGAAAAAGCCAACATTA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
A6U5G1 |
Definition |
sp|A6U5G1|GLND_SINMW [Protein-PII] uridylyltransferase OS=Sinorhizobium medicae (strain WSM419) |
Align length |
45 |
Score (bit) |
40.0 |
E-value |
0.008 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q75IY1 |
Definition |
tr|Q75IY1|Q75IY1_ORYSJ Os03g0413100 protein OS=Oryza sativa subsp. japonica |
Align length |
141 |
Score (bit) |
136.0 |
E-value |
7.0e-31 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK957748|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0029_C23, 5' (562 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q75IY1|Q75IY1_ORYSJ Os03g0413100 protein OS=Oryza sativa subs... 136 7e-31 tr|Q75IY0|Q75IY0_ORYSJ Putative ACT domain containing protein, A... 136 7e-31 tr|A3AJ25|A3AJ25_ORYSJ Putative uncharacterized protein OS=Oryza... 136 7e-31 tr|A2XHY2|A2XHY2_ORYSI Putative uncharacterized protein OS=Oryza... 136 7e-31 tr|A9T9E5|A9T9E5_PHYPA Predicted protein OS=Physcomitrella paten... 132 2e-29 tr|B7ZYV0|B7ZYV0_MAIZE Putative uncharacterized protein OS=Zea m... 130 5e-29 tr|B6SL14|B6SL14_MAIZE ACR4 OS=Zea mays PE=2 SV=1 130 5e-29 tr|B4G0N4|B4G0N4_MAIZE Putative uncharacterized protein OS=Zea m... 130 5e-29 tr|A9SEL6|A9SEL6_PHYPA Predicted protein OS=Physcomitrella paten... 128 2e-28 tr|Q9ZPQ8|Q9ZPQ8_ARATH Putative uridylyl transferase OS=Arabidop... 125 1e-27 tr|Q8LJW2|Q8LJW2_ARATH ACR5 OS=Arabidopsis thaliana GN=ACR5 PE=2... 125 1e-27 tr|B4YPV8|B4YPV8_BRAOA Putative uncharacterized protein OS=Brass... 125 1e-27 tr|A7P2B7|A7P2B7_VITVI Chromosome chr1 scaffold_5, whole genome ... 124 3e-27 tr|A5BD32|A5BD32_VITVI Putative uncharacterized protein OS=Vitis... 124 3e-27 tr|Q9LQB5|Q9LQB5_ARATH F4N2.2 OS=Arabidopsis thaliana PE=4 SV=1 123 6e-27 tr|Q8LJW3|Q8LJW3_ARATH ACR4 (At1g69040) OS=Arabidopsis thaliana ... 123 6e-27 tr|Q8GWT8|Q8GWT8_ARATH Putative uncharacterized protein At1g6904... 123 6e-27 tr|Q3ECF7|Q3ECF7_ARATH Uncharacterized protein At1g69040.2 OS=Ar... 123 6e-27 tr|A7QUU8|A7QUU8_VITVI Chromosome chr1 scaffold_180, whole genom... 123 8e-27 tr|A9SSE7|A9SSE7_PHYPA Predicted protein OS=Physcomitrella paten... 122 1e-26 tr|A9PH33|A9PH33_POPTR Putative uncharacterized protein OS=Popul... 122 1e-26 tr|A7QK86|A7QK86_VITVI Chromosome chr2 scaffold_112, whole genom... 122 2e-26 tr|A5ADW0|A5ADW0_VITVI Putative uncharacterized protein OS=Vitis... 122 2e-26 tr|A5C2B4|A5C2B4_VITVI Putative uncharacterized protein OS=Vitis... 120 4e-26 tr|A9RYC9|A9RYC9_PHYPA Predicted protein OS=Physcomitrella paten... 119 9e-26 tr|A5AWQ7|A5AWQ7_VITVI Putative uncharacterized protein (Chromos... 119 1e-25 tr|A9NND6|A9NND6_PICSI Putative uncharacterized protein OS=Picea... 117 4e-25 tr|Q6YZC9|Q6YZC9_ORYSJ Uridylyl transferase-like OS=Oryza sativa... 115 2e-24 tr|Q0J456|Q0J456_ORYSJ Os08g0533300 protein OS=Oryza sativa subs... 115 2e-24 tr|Q9LNA5|Q9LNA5_ARATH F5O11.14 (At1g12420) (Putative uncharacte... 113 6e-24
>tr|Q75IY1|Q75IY1_ORYSJ Os03g0413100 protein OS=Oryza sativa subsp. japonica GN=OsACR7 PE=2 SV=1 Length = 452
Score = 136 bits (343), Expect = 7e-31 Identities = 77/141 (54%), Positives = 99/141 (70%), Gaps = 1/141 (0%) Frame = +3
Query: 9 LDSAAERQRVIQCLRAAINRRVTQGLRLDFFLHHRVGLLSDVTRIFREHGLSVTRADVNT 188 ++S AERQRVIQCL AAI RRV++GL+L+ RVGLLSDVTRIFRE+GL+VTRA+V+T Sbjct: 317 VNSEAERQRVIQCLEAAIERRVSEGLKLELSTGDRVGLLSDVTRIFRENGLTVTRAEVST 376
Query: 189 KDNKAINVFYVTDAAG-NVVDLKAVEAVRQSIGKAVLQVKSPPSDCNIPSTKATTXXXXX 365 + +KA+N FYV DAAG + VDLK +EA+RQ IG+ VLQVK P P ++ + Sbjct: 377 RGDKAVNTFYVRDAAGSSAVDLKTLEAIRQEIGQTVLQVKGHPDHRKSPPQESPS----- 431
Query: 366 XXXXXXXMPAQVLYSLGLIKS 428 + LYSLGLI+S Sbjct: 432 RFLFSSLFRPRSLYSLGLIRS 452
>tr|Q75IY0|Q75IY0_ORYSJ Putative ACT domain containing protein, ACR4, with alternative splicing forms (ACT domain containing protein, putative, expressed) OS=Oryza sativa subsp. japonica GN=LOC_Os03g29980 PE=4 SV=1 Length = 374
Score = 136 bits (343), Expect = 7e-31 Identities = 77/141 (54%), Positives = 99/141 (70%), Gaps = 1/141 (0%) Frame = +3
Query: 9 LDSAAERQRVIQCLRAAINRRVTQGLRLDFFLHHRVGLLSDVTRIFREHGLSVTRADVNT 188 ++S AERQRVIQCL AAI RRV++GL+L+ RVGLLSDVTRIFRE+GL+VTRA+V+T Sbjct: 239 VNSEAERQRVIQCLEAAIERRVSEGLKLELSTGDRVGLLSDVTRIFRENGLTVTRAEVST 298
Query: 189 KDNKAINVFYVTDAAG-NVVDLKAVEAVRQSIGKAVLQVKSPPSDCNIPSTKATTXXXXX 365 + +KA+N FYV DAAG + VDLK +EA+RQ IG+ VLQVK P P ++ + Sbjct: 299 RGDKAVNTFYVRDAAGSSAVDLKTLEAIRQEIGQTVLQVKGHPDHRKSPPQESPS----- 353
Query: 366 XXXXXXXMPAQVLYSLGLIKS 428 + LYSLGLI+S Sbjct: 354 RFLFSSLFRPRSLYSLGLIRS 374
>tr|A3AJ25|A3AJ25_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_010797 PE=4 SV=1 Length = 455
Score = 136 bits (343), Expect = 7e-31 Identities = 77/141 (54%), Positives = 99/141 (70%), Gaps = 1/141 (0%) Frame = +3
Query: 9 LDSAAERQRVIQCLRAAINRRVTQGLRLDFFLHHRVGLLSDVTRIFREHGLSVTRADVNT 188 ++S AERQRVIQCL AAI RRV++GL+L+ RVGLLSDVTRIFRE+GL+VTRA+V+T Sbjct: 320 VNSEAERQRVIQCLEAAIERRVSEGLKLELSTGDRVGLLSDVTRIFRENGLTVTRAEVST 379
Query: 189 KDNKAINVFYVTDAAG-NVVDLKAVEAVRQSIGKAVLQVKSPPSDCNIPSTKATTXXXXX 365 + +KA+N FYV DAAG + VDLK +EA+RQ IG+ VLQVK P P ++ + Sbjct: 380 RGDKAVNTFYVRDAAGSSAVDLKTLEAIRQEIGQTVLQVKGHPDHRKSPPQESPS----- 434
Query: 366 XXXXXXXMPAQVLYSLGLIKS 428 + LYSLGLI+S Sbjct: 435 RFLFSSLFRPRSLYSLGLIRS 455
>tr|A2XHY2|A2XHY2_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_12028 PE=4 SV=1 Length = 455
Score = 136 bits (343), Expect = 7e-31 Identities = 77/141 (54%), Positives = 99/141 (70%), Gaps = 1/141 (0%) Frame = +3
Query: 9 LDSAAERQRVIQCLRAAINRRVTQGLRLDFFLHHRVGLLSDVTRIFREHGLSVTRADVNT 188 ++S AERQRVIQCL AAI RRV++GL+L+ RVGLLSDVTRIFRE+GL+VTRA+V+T Sbjct: 320 VNSEAERQRVIQCLEAAIERRVSEGLKLELSTGDRVGLLSDVTRIFRENGLTVTRAEVST 379
Query: 189 KDNKAINVFYVTDAAG-NVVDLKAVEAVRQSIGKAVLQVKSPPSDCNIPSTKATTXXXXX 365 + +KA+N FYV DAAG + VDLK +EA+RQ IG+ VLQVK P P ++ + Sbjct: 380 RGDKAVNTFYVRDAAGSSAVDLKTLEAIRQEIGQTVLQVKGHPDHRKSPPQESPS----- 434
Query: 366 XXXXXXXMPAQVLYSLGLIKS 428 + LYSLGLI+S Sbjct: 435 RFLFSSLFRPRSLYSLGLIRS 455
>tr|A9T9E5|A9T9E5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_142202 PE=4 SV=1 Length = 454
Score = 132 bits (331), Expect = 2e-29 Identities = 68/102 (66%), Positives = 84/102 (82%) Frame = +3
Query: 9 LDSAAERQRVIQCLRAAINRRVTQGLRLDFFLHHRVGLLSDVTRIFREHGLSVTRADVNT 188 LD+AAE Q + CL AAINRR T+GLRL+ ++ RVGLLSDVT+IFRE+GLSV RADV T Sbjct: 316 LDTAAE-QHLKVCLEAAINRRTTEGLRLELCMNDRVGLLSDVTKIFRENGLSVARADVTT 374
Query: 189 KDNKAINVFYVTDAAGNVVDLKAVEAVRQSIGKAVLQVKSPP 314 +D+KA+NVFYV DA+G VD+K VEA+R+SIG A+LQVK P Sbjct: 375 RDDKAVNVFYVVDASGCTVDMKVVEAMRKSIGHAILQVKGVP 416
>tr|B7ZYV0|B7ZYV0_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 440
Score = 130 bits (327), Expect = 5e-29 Identities = 64/108 (59%), Positives = 86/108 (79%) Frame = +3
Query: 9 LDSAAERQRVIQCLRAAINRRVTQGLRLDFFLHHRVGLLSDVTRIFREHGLSVTRADVNT 188 ++S AER+R+IQCL AAI RRV++GL+L+ RVGLLSDVTRIFRE+GL+VTRA+V+T Sbjct: 306 VNSEAERKRIIQCLEAAIERRVSEGLKLELSTGDRVGLLSDVTRIFRENGLTVTRAEVST 365
Query: 189 KDNKAINVFYVTDAAGNVVDLKAVEAVRQSIGKAVLQVKSPPSDCNIP 332 + ++A+N FYV DAAG+ V+L+ +EA+RQ IG+ VLQVK P P Sbjct: 366 RGDEAVNTFYVRDAAGSAVELRTLEAIRQEIGQTVLQVKGHPEQPKPP 413
>tr|B6SL14|B6SL14_MAIZE ACR4 OS=Zea mays PE=2 SV=1 Length = 458
Score = 130 bits (327), Expect = 5e-29 Identities = 64/108 (59%), Positives = 86/108 (79%) Frame = +3
Query: 9 LDSAAERQRVIQCLRAAINRRVTQGLRLDFFLHHRVGLLSDVTRIFREHGLSVTRADVNT 188 ++S AER+R+IQCL AAI RRV++GL+L+ RVGLLSDVTRIFRE+GL+VTRA+V+T Sbjct: 324 VNSEAERKRIIQCLEAAIERRVSEGLKLELSTGDRVGLLSDVTRIFRENGLTVTRAEVST 383
Query: 189 KDNKAINVFYVTDAAGNVVDLKAVEAVRQSIGKAVLQVKSPPSDCNIP 332 + ++A+N FYV DAAG+ V+L+ +EA+RQ IG+ VLQVK P P Sbjct: 384 RGDEAVNTFYVRDAAGSAVELRTLEAIRQEIGQTVLQVKGHPEQPKPP 431
>tr|B4G0N4|B4G0N4_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 458
Score = 130 bits (327), Expect = 5e-29 Identities = 64/108 (59%), Positives = 86/108 (79%) Frame = +3
Query: 9 LDSAAERQRVIQCLRAAINRRVTQGLRLDFFLHHRVGLLSDVTRIFREHGLSVTRADVNT 188 ++S AER+R+IQCL AAI RRV++GL+L+ RVGLLSDVTRIFRE+GL+VTRA+V+T Sbjct: 324 VNSEAERKRIIQCLEAAIERRVSEGLKLELSTGDRVGLLSDVTRIFRENGLTVTRAEVST 383
Query: 189 KDNKAINVFYVTDAAGNVVDLKAVEAVRQSIGKAVLQVKSPPSDCNIP 332 + ++A+N FYV DAAG+ V+L+ +EA+RQ IG+ VLQVK P P Sbjct: 384 RGDEAVNTFYVRDAAGSAVELRTLEAIRQEIGQTVLQVKGHPEQPKPP 431
>tr|A9SEL6|A9SEL6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_211504 PE=4 SV=1 Length = 448
Score = 128 bits (322), Expect = 2e-28 Identities = 66/113 (58%), Positives = 91/113 (80%), Gaps = 1/113 (0%) Frame = +3
Query: 9 LDSAAERQRVIQCLRAAINRRVTQGLRLDFFLHHRVGLLSDVTRIFREHGLSVTRADVNT 188 L++ AE Q +I CL AAINRR T+GLRL+ ++ RVGLLS+VT+IFRE+GLSV RADV+T Sbjct: 313 LETPAE-QHLIVCLEAAINRRTTKGLRLELCMNDRVGLLSEVTKIFRENGLSVARADVST 371
Query: 189 KDNKAINVFYVTDAAGNVVDLKAVEAVRQSIGKAVLQVK-SPPSDCNIPSTKA 344 +D+KA+NVFYV DA+G V++K VE +R++IG A+LQVK +PP + +P+ A Sbjct: 372 RDDKAVNVFYVLDASGRPVNMKVVEEMRKTIGHAILQVKGTPPQESELPNPGA 424
>tr|Q9ZPQ8|Q9ZPQ8_ARATH Putative uridylyl transferase OS=Arabidopsis thaliana GN=At2g03730 PE=2 SV=2 Length = 456
Score = 125 bits (315), Expect = 1e-27 Identities = 63/102 (61%), Positives = 81/102 (79%) Frame = +3
Query: 15 SAAERQRVIQCLRAAINRRVTQGLRLDFFLHHRVGLLSDVTRIFREHGLSVTRADVNTKD 194 S AERQRVI+CL+AAI RRV++GL+L+ RVGLLSDVTRIFRE+ L+VTRA+V TK Sbjct: 325 SEAERQRVIKCLKAAIQRRVSEGLKLELCTSDRVGLLSDVTRIFRENSLTVTRAEVKTKG 384
Query: 195 NKAINVFYVTDAAGNVVDLKAVEAVRQSIGKAVLQVKSPPSD 320 +KA+N FYV DA+G VD K +E++RQ IG+ +LQVK +D Sbjct: 385 DKALNTFYVRDASGYQVDTKTIESIRQVIGQTILQVKGGNTD 426
Score = 37.4 bits (85), Expect = 0.56 Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 1/78 (1%) Frame = +3
Query: 117 GLLSDVTRIFREHGLSVTRADVNTKDNKAINVFYVTDAAGN-VVDLKAVEAVRQSIGKAV 293 G+L +V ++ E L++ +A +++ ++VF VTD GN V D +E +R+S+G Sbjct: 49 GILLEVVQVLTELNLTIKKAYISSDGGWFMDVFNVTDQDGNKVTDEIVLEYIRKSLG--- 105
Query: 294 LQVKSPPSDCNIPSTKAT 347 S C PS ++T Sbjct: 106 ----PDESSCFSPSMRST 119
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