DK957771 |
Clone id |
TST39A01NGRL0029_D22 |
Library |
TST39 |
Length |
638 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0029_D22. 5' end sequence. |
Accession |
DK957771 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL382Contig1 |
Sequence |
GCGAGGGTTTCCGGCCATGGCTGCAGCTGCTGCAGCTCTTTCTGCGCGCCCGTTCTCTCG GAATGATTTTTCTATTTCCGGCAGTGAGATCTGCTGTAGTAGCAGCTCTACCAGCAAGAT CCTTGGAGGCCAGCTCGCCATCGGATCTAGAAATTATTCCCCTCTCAAGCTTGGATCCTC TCTCTGCCACAGCTATGGCACCTCCGCTTTGAGACAGAGATTCGTCTCTTCGAAGCCTGG CAGTAGGAACAGGGAGCTGACAATAACGGCGAGTGCTGCTGCTGCCTCTGTTCCTGCGGC CCCTGCTCCTGCCCCTCCTTCCACCCAGCAATGGCAAGGCGCCGACATGAAATCCTTGCT TATTTCTATAGCTACAGGTGTTGCGATCTGGTTCATTCCTGCTCCCTCGGGAGTTTCAAA GAATGCTTGGCAGCTTCTTTCGATTTTCCTCGCCACTATTGTGGGCATCATCACCCAACC TCTCCCTCTCGGAGCTGTGGCTCTCATGGGACTTGGTGCTTGCGTGCTAACCAAAACTCT CACATTTGCTGCAGCCTTCTCTTCTTTTGGTGATCCTATCCCTTGGCTCATTGCCCTTGC CTTTTTCTTCGCTCGTGGTTTCATCAAGACAGGTCTCG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q41364 |
Definition |
sp|Q41364|SOT1_SPIOL 2-oxoglutarate/malate translocator, chloroplastic OS=Spinacia oleracea |
Align length |
104 |
Score (bit) |
182.0 |
E-value |
2.0e-45 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK957771|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0029_D22, 5' (638 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q41364|SOT1_SPIOL 2-oxoglutarate/malate translocator, chlorop... 182 2e-45 sp|O34726|YFLS_BACSU Putative malate transporter yflS OS=Bacillu... 114 4e-25 sp|P75763|YBHI_ECOLI Inner membrane protein ybhI OS=Escherichia ... 62 3e-09 sp|Q3YXI0|TTDT_SHISS L-tartrate/succinate antiporter OS=Shigella... 59 2e-08 sp|Q0TD43|TTDT_ECOL5 L-tartrate/succinate antiporter OS=Escheric... 59 2e-08 sp|Q8XBK4|TTDT_ECO57 L-tartrate/succinate antiporter OS=Escheric... 59 2e-08 sp|Q83JJ9|TTDT_SHIFL L-tartrate/succinate antiporter OS=Shigella... 59 3e-08 sp|P39414|TTDT_ECOLI L-tartrate/succinate antiporter OS=Escheric... 59 3e-08 sp|Q1R6R8|TTDT_ECOUT L-tartrate/succinate antiporter OS=Escheric... 58 4e-08 sp|Q8FDG7|TTDT_ECOL6 L-tartrate/succinate antiporter OS=Escheric... 58 4e-08 sp|Q32BQ4|TTDT_SHIDS L-tartrate/succinate antiporter OS=Shigella... 57 6e-08 sp|Q31WX1|TTDT_SHIBS L-tartrate/succinate antiporter OS=Shigella... 57 8e-08 sp|Q57048|Y020_HAEIN Uncharacterized transporter HI0020 OS=Haemo... 55 3e-07 sp|P0AE74|CITT_ECOLI Citrate carrier OS=Escherichia coli (strain... 54 7e-07 sp|P0AE75|CITT_ECO57 Citrate carrier OS=Escherichia coli O157:H7... 54 7e-07 sp|P0AFU2|YFBS_ECOLI Uncharacterized transporter yfbS OS=Escheri... 43 0.001 sp|P0AFU3|YFBS_ECO57 Uncharacterized transporter yfbS OS=Escheri... 43 0.001 sp|Q9GZR3|CFC1_HUMAN Cryptic protein OS=Homo sapiens GN=CFC1 PE=... 38 0.051 sp|P97766|CFC1_MOUSE Cryptic protein OS=Mus musculus GN=Cfc1 PE=... 36 0.15 sp|P0AA23|EBR_SALTY Putative ethidium bromide resistance protein... 35 0.25 sp|P0AA24|EBR_PSEAE Putative ethidium bromide resistance protein... 35 0.25 sp|P0AA22|EBR_ECOLX Putative ethidium bromide resistance protein... 35 0.25 sp|O67776|Y1964_AQUAE Putative zinc metalloprotease aq_1964 OS=A... 32 2.1 sp|Q5XIB1|TSSC4_RAT Protein TSSC4 OS=Rattus norvegicus GN=Tssc4 ... 32 2.1 sp|Q39593|SAC1_CHLRE Putative sulfur deprivation response regula... 32 3.6 sp|A1B673|ILVD_PARDP Dihydroxy-acid dehydratase OS=Paracoccus de... 31 6.2 sp|Q1QF31|NHAA_NITHX Na(+)/H(+) antiporter nhaA OS=Nitrobacter h... 30 8.1 sp|Q18034|NFX1_CAEEL Transcriptional repressor NF-X1 homolog OS=... 30 8.1 sp|Q9WUL6|M3K14_MOUSE Mitogen-activated protein kinase kinase ki... 30 8.1 sp|P40900|ISP4_SCHPO Sexual differentiation process protein isp4... 30 8.1
>sp|Q41364|SOT1_SPIOL 2-oxoglutarate/malate translocator, chloroplastic OS=Spinacia oleracea GN=SODIT1 PE=1 SV=1 Length = 569
Score = 182 bits (461), Expect = 2e-45 Identities = 89/104 (85%), Positives = 95/104 (91%) Frame = +2
Query: 326 QQWQGADMKSLLISIATGVAIWFIPAPSGVSKNAWQLLSIFLATIVGIITQPLPLGAVAL 505 Q WQGA +K LL SI TGV IWFIP P GVS+NAWQLL+IFL+TIVGIITQPLPLGAVAL Sbjct: 97 QPWQGASIKPLLASILTGVIIWFIPTPEGVSRNAWQLLAIFLSTIVGIITQPLPLGAVAL 156
Query: 506 MGLGACVLTKTLTFAAAFSSFGDPIPWLIALAFFFARGFIKTGL 637 MGLGA VLTKTLTF+AAFS+FGDPIPWLIALAFFFARGFIKTGL Sbjct: 157 MGLGASVLTKTLTFSAAFSAFGDPIPWLIALAFFFARGFIKTGL 200
>sp|O34726|YFLS_BACSU Putative malate transporter yflS OS=Bacillus subtilis GN=yflS PE=2 SV=1 Length = 478
Score = 114 bits (285), Expect = 4e-25 Identities = 52/94 (55%), Positives = 68/94 (72%) Frame = +2
Query: 356 LLISIATGVAIWFIPAPSGVSKNAWQLLSIFLATIVGIITQPLPLGAVALMGLGACVLTK 535 LLI++A G+ IWFIPAPSG+ AW L +IF+ATI+G I++PLP+GA+A+ L LT Sbjct: 18 LLITVAVGLIIWFIPAPSGLEPKAWHLFAIFVATIIGFISKPLPMGAIAIFALAVTALTG 77
Query: 536 TLTFAAAFSSFGDPIPWLIALAFFFARGFIKTGL 637 TL+ S FG+ WLI +AFF +RGFIKTGL Sbjct: 78 TLSIEDTLSGFGNKTIWLIVIAFFISRGFIKTGL 111
>sp|P75763|YBHI_ECOLI Inner membrane protein ybhI OS=Escherichia coli (strain K12) GN=ybhI PE=1 SV=1 Length = 477
Score = 61.6 bits (148), Expect = 3e-09 Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 6/100 (6%) Frame = +2
Query: 356 LLISIATGVAIWFIPAPSGVSKNAWQLLSIFLATIVGIITQPLPLGAVALMGLGACVLT- 532 L++ +A I F+PAP+G+S+ AW L I+LA IVG++ +P P V L+ + A ++ Sbjct: 9 LILILAIPCIIGFMPAPAGLSELAWVLFGIYLAAIVGLVIKPFPEPVVLLIAVAASMVVV 68
Query: 533 -----KTLTFAAAFSSFGDPIPWLIALAFFFARGFIKTGL 637 A S + WL+ AF + F+ TGL Sbjct: 69 GNLSDGAFKTTAVLSGYSSGTTWLVFSAFTLSAAFVTTGL 108
>sp|Q3YXI0|TTDT_SHISS L-tartrate/succinate antiporter OS=Shigella sonnei (strain Ss046) GN=ttdT PE=3 SV=1 Length = 487
Score = 59.3 bits (142), Expect = 2e-08 Identities = 35/111 (31%), Positives = 53/111 (47%), Gaps = 18/111 (16%) Frame = +2
Query: 359 LISIATGVAIWFIPAPSGVSKNAWQLLSIFLATIVGIITQPLPLGAVALMGLG-ACVLTK 535 L +A I IP P+G+ + W ++F IVG+I +P+P VA++G+ +L+ Sbjct: 11 LAPLAVIAIIALIPVPAGLESHTWLYFAVFTGVIVGLILEPVPGAVVAMVGISIIAILSP 70
Query: 536 TLTFAA-----------------AFSSFGDPIPWLIALAFFFARGFIKTGL 637 L F+ A S F + + WLI AF F G+ KTGL Sbjct: 71 WLLFSPEQLAQPGFKFTAKSLSWAVSGFSNSVIWLIFAAFMFGTGYEKTGL 121
>sp|Q0TD43|TTDT_ECOL5 L-tartrate/succinate antiporter OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=ttdT PE=2 SV=1 Length = 487
Score = 59.3 bits (142), Expect = 2e-08 Identities = 35/111 (31%), Positives = 53/111 (47%), Gaps = 18/111 (16%) Frame = +2
Query: 359 LISIATGVAIWFIPAPSGVSKNAWQLLSIFLATIVGIITQPLPLGAVALMGLG-ACVLTK 535 L +A I IP P+G+ + W ++F IVG+I +P+P VA++G+ +L+ Sbjct: 11 LAPLAVIAIIALIPVPAGLESHTWLYFAVFTGVIVGLILEPVPGAVVAMVGISIIAILSP 70
Query: 536 TLTFAA-----------------AFSSFGDPIPWLIALAFFFARGFIKTGL 637 L F+ A S F + + WLI AF F G+ KTGL Sbjct: 71 WLLFSPEQLAQPGFKFTAKSLSWAVSGFSNSVIWLIFAAFMFGTGYEKTGL 121
>sp|Q8XBK4|TTDT_ECO57 L-tartrate/succinate antiporter OS=Escherichia coli O157:H7 GN=ttdT PE=2 SV=1 Length = 487
Score = 59.3 bits (142), Expect = 2e-08 Identities = 35/111 (31%), Positives = 53/111 (47%), Gaps = 18/111 (16%) Frame = +2
Query: 359 LISIATGVAIWFIPAPSGVSKNAWQLLSIFLATIVGIITQPLPLGAVALMGLG-ACVLTK 535 L +A I IP P+G+ + W ++F IVG+I +P+P VA++G+ +L+ Sbjct: 11 LAPLAVIAIIALIPVPAGLESHTWLYFAVFTGVIVGLILEPVPGAVVAMVGISIIAILSP 70
Query: 536 TLTFAA-----------------AFSSFGDPIPWLIALAFFFARGFIKTGL 637 L F+ A S F + + WLI AF F G+ KTGL Sbjct: 71 WLLFSPEQLAQPGFKFTAKSLSWAVSGFSNSVIWLIFAAFMFGTGYEKTGL 121
>sp|Q83JJ9|TTDT_SHIFL L-tartrate/succinate antiporter OS=Shigella flexneri GN=ttdT PE=3 SV=1 Length = 487
Score = 58.5 bits (140), Expect = 3e-08 Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 18/111 (16%) Frame = +2
Query: 359 LISIATGVAIWFIPAPSGVSKNAWQLLSIFLATIVGIITQPLPLGAVALMGLG-ACVLTK 535 L +A I +P P+G+ + W ++F IVG+I +P+P VA++G+ +L+ Sbjct: 11 LAPLAVIAIIALLPVPAGLENHTWLYFAVFTGVIVGLILEPVPGAVVAMVGISIIAILSP 70
Query: 536 TLTFAA-----------------AFSSFGDPIPWLIALAFFFARGFIKTGL 637 L F+ A S F + + WLI AF F G+ KTGL Sbjct: 71 WLLFSPEQLAQPGFKFTAKSLSWAVSGFSNSVIWLIFAAFMFGTGYEKTGL 121
>sp|P39414|TTDT_ECOLI L-tartrate/succinate antiporter OS=Escherichia coli (strain K12) GN=ttdT PE=1 SV=2 Length = 487
Score = 58.5 bits (140), Expect = 3e-08 Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 18/111 (16%) Frame = +2
Query: 359 LISIATGVAIWFIPAPSGVSKNAWQLLSIFLATIVGIITQPLPLGAVALMGLG-ACVLTK 535 L +A I +P P+G+ + W ++F IVG+I +P+P VA++G+ +L+ Sbjct: 11 LAPLAVIAIIALLPVPAGLENHTWLYFAVFTGVIVGLILEPVPGAVVAMVGISIIAILSP 70
Query: 536 TLTFAA-----------------AFSSFGDPIPWLIALAFFFARGFIKTGL 637 L F+ A S F + + WLI AF F G+ KTGL Sbjct: 71 WLLFSPEQLAQPGFKFTAKSLSWAVSGFSNSVIWLIFAAFMFGTGYEKTGL 121
>sp|Q1R6R8|TTDT_ECOUT L-tartrate/succinate antiporter OS=Escherichia coli (strain UTI89 / UPEC) GN=ttdT PE=2 SV=1 Length = 487
Score = 58.2 bits (139), Expect = 4e-08 Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 18/111 (16%) Frame = +2
Query: 359 LISIATGVAIWFIPAPSGVSKNAWQLLSIFLATIVGIITQPLPLGAVALMGLG-ACVLTK 535 L +A I +P P+G+ + W ++F IVG+I +P+P VA++G+ +L+ Sbjct: 11 LAPLAVIAIIALLPLPAGLESHTWLYFAVFTGVIVGLILEPVPGAVVAMVGISIIAILSP 70
Query: 536 TLTFAA-----------------AFSSFGDPIPWLIALAFFFARGFIKTGL 637 L F+ A S F + + WLI AF F G+ KTGL Sbjct: 71 WLLFSPEQLAQPGFKFTAKSLSWAVSGFSNSVIWLIFAAFMFGTGYEKTGL 121
>sp|Q8FDG7|TTDT_ECOL6 L-tartrate/succinate antiporter OS=Escherichia coli O6 GN=ttdT PE=2 SV=1 Length = 487
Score = 58.2 bits (139), Expect = 4e-08 Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 18/111 (16%) Frame = +2
Query: 359 LISIATGVAIWFIPAPSGVSKNAWQLLSIFLATIVGIITQPLPLGAVALMGLG-ACVLTK 535 L +A I +P P+G+ + W ++F IVG+I +P+P VA++G+ +L+ Sbjct: 11 LAPLAVIAIIALLPLPAGLESHTWLYFAVFTGVIVGLILEPVPGAVVAMVGISIIAILSP 70
Query: 536 TLTFAA-----------------AFSSFGDPIPWLIALAFFFARGFIKTGL 637 L F+ A S F + + WLI AF F G+ KTGL Sbjct: 71 WLLFSPEQLAQPGFKFTAKSLSWAVSGFSNSVIWLIFAAFMFGTGYEKTGL 121
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9LXV3 |
Definition |
tr|Q9LXV3|Q9LXV3_ARATH 2-oxoglutarate/malate translocator-like protein OS=Arabidopsis thaliana |
Align length |
102 |
Score (bit) |
180.0 |
E-value |
6.0e-44 |
Report |
|