DK957825 |
Clone id |
TST39A01NGRL0029_G04 |
Library |
TST39 |
Length |
478 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0029_G04. 5' end sequence. |
Accession |
DK957825 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1744Contig1 |
Sequence |
GATTCCCCACCGTTTCAAATACTCGCTTATACCCTACGCGATGCACTCCGTATATATGTT GTTCTACTGGATCTCAACAGGAAGATCCGGAGGGTCCTGGTGATTGGGATGCAGCTTGGG AAAAGCTAAAAGAAAAAAGAGGAAAATTGGAAGGTGTCTCTGGATTAGAGTTGACAAAAA TAGAACAACCAGCACCAGAGTCTGTGCGCAAGGATTCTAACTCTGGAGATGTACGTGATG CTGGTCCTCGCTTGACAAAGTGGGGTGGAAGCGTAAGGGGCGGCAGGTACCGGCTAGGGG AAGGGGCCGATCGAATACTCGAATTTTGGGGGAATGGAGATGTGGCTCTTACTGCGGCGC TTGTAGTGATTGTGTTGATTTTTGTGCTTTTCCAATTCACCCCACCATCAGCTTCATTGT AATCAAAGCATTCAAACGCCTTCGGTAAGGCATTTGAAATTTAAGGCCGATTTACCTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9QXY2 |
Definition |
sp|Q9QXY2|SNIP_RAT p130Cas-associated protein OS=Rattus norvegicus |
Align length |
55 |
Score (bit) |
35.8 |
E-value |
0.1 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q4YAE9 |
Definition |
tr|Q4YAE9|Q4YAE9_PLABE Putative uncharacterized protein (Fragment) OS=Plasmodium berghei |
Align length |
48 |
Score (bit) |
38.1 |
E-value |
0.22 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK957825|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0029_G04, 5' (478 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q4YAE9|Q4YAE9_PLABE Putative uncharacterized protein (Fragmen... 38 0.22 tr|B1AQX9|B1AQX9_MOUSE P140 gene OS=Mus musculus GN=P140 PE=4 SV=1 36 1.1 tr|B1AQX7|B1AQX7_MOUSE P140 gene OS=Mus musculus GN=P140 PE=4 SV=1 36 1.1 tr|B1AQX6|B1AQX6_MOUSE P140 gene OS=Mus musculus GN=P140 PE=4 SV=1 36 1.1 tr|A8NZG5|A8NZG5_COPC7 Predicted protein OS=Coprinopsis cinerea ... 36 1.1 tr|Q9DWF7|Q9DWF7_RCMVM PR34 OS=Rat cytomegalovirus (strain Maast... 35 1.4 tr|B4JQT6|B4JQT6_DROGR GH13754 OS=Drosophila grimshawi GN=GH1375... 35 1.4 tr|A7EBG8|A7EBG8_SCLS1 Putative uncharacterized protein OS=Scler... 35 1.9 tr|A5G0A9|A5G0A9_ACICJ Putative FHA domain containing protein OS... 35 2.4 tr|A0ZDY5|A0ZDY5_NODSP Putative uncharacterized protein OS=Nodul... 35 2.4 tr|A8Q1G1|A8Q1G1_BRUMA Thrombospondin type 1 domain containing p... 35 2.4 tr|A8HQN5|A8HQN5_CHLRE Predicted protein (Fragment) OS=Chlamydom... 34 3.2 tr|Q55CR5|Q55CR5_DICDI Regulator of chromosome condensation (RCC... 34 3.2 tr|Q54X05|Q54X05_DICDI Putative uncharacterized protein OS=Dicty... 34 3.2 tr|A2F3B6|A2F3B6_TRIVA Putative uncharacterized protein OS=Trich... 34 3.2 tr|B8M136|B8M136_9EURO Mucin-1, putative OS=Talaromyces stipitat... 34 3.2 tr|Q5YRD7|Q5YRD7_NOCFA Putative uncharacterized protein OS=Nocar... 34 4.1 tr|B7T4J5|B7T4J5_DROAI CG14110-like protein (Fragment) OS=Drosop... 34 4.1 tr|B4LV51|B4LV51_DROVI GJ17399 OS=Drosophila virilis GN=GJ17399 ... 34 4.1 tr|A4HVI7|A4HVI7_LEIIN Putative uncharacterized protein OS=Leish... 34 4.1 tr|Q5KG29|Q5KG29_CRYNE Putative uncharacterized protein OS=Crypt... 34 4.1 tr|A4TXN7|A4TXN7_9PROT Triosephosphate isomerase OS=Magnetospiri... 33 5.4 tr|B4L999|B4L999_DROMO GI16810 OS=Drosophila mojavensis GN=GI168... 33 5.4 tr|B3RL10|B3RL10_TRIAD Putative uncharacterized protein OS=Trich... 33 5.4 tr|Q7RYP2|Q7RYP2_NEUCR Predicted protein OS=Neurospora crassa GN... 33 5.4 tr|Q5EEP1|Q5EEP1_9VIRU Envelope glycoprotein OS=Crimean-Congo he... 33 7.0 tr|Q2IFU6|Q2IFU6_ANADE Response regulator receiver domain protei... 33 7.0 tr|Q10DK1|Q10DK1_ORYSJ Os03g0776100 protein OS=Oryza sativa subs... 33 7.0 tr|A3AU28|A3AU28_ORYSJ Putative uncharacterized protein OS=Oryza... 33 7.0 tr|Q86H34|Q86H34_DICDI Putative uncharacterized protein OS=Dicty... 33 7.0
>tr|Q4YAE9|Q4YAE9_PLABE Putative uncharacterized protein (Fragment) OS=Plasmodium berghei GN=PB401576.00.0 PE=4 SV=1 Length = 88
Score = 38.1 bits (87), Expect = 0.22 Identities = 19/48 (39%), Positives = 30/48 (62%) Frame = -1
Query: 367 TTSAAVRATSPFPQNSSIRSAPSPSRYLPPLTLPPHFVKRGPASRTSP 224 ++S++ ++SPFP +S+ ++PSP LPPL+ PPH R P P Sbjct: 28 SSSSSSSSSSPFPSSSTSSTSPSPPP-LPPLSPPPHPPPRPPPPHPPP 74
>tr|B1AQX9|B1AQX9_MOUSE P140 gene OS=Mus musculus GN=P140 PE=4 SV=1 Length = 1217
Score = 35.8 bits (81), Expect = 1.1 Identities = 25/55 (45%), Positives = 29/55 (52%) Frame = -1
Query: 331 PQNSSIRSAPSPSRYLPPLTLPPHFVKRGPASRTSPELESLRTDSGAGCSIFVNS 167 PQ + SAPS PP PPH GP SR SP +S R DSG+ S+F S Sbjct: 508 PQKLADVSAPSGG---PP---PPHSPYSGPPSRGSPVRQSFRKDSGSS-SVFAES 555
>tr|B1AQX7|B1AQX7_MOUSE P140 gene OS=Mus musculus GN=P140 PE=4 SV=1 Length = 1198
Score = 35.8 bits (81), Expect = 1.1 Identities = 25/55 (45%), Positives = 29/55 (52%) Frame = -1
Query: 331 PQNSSIRSAPSPSRYLPPLTLPPHFVKRGPASRTSPELESLRTDSGAGCSIFVNS 167 PQ + SAPS PP PPH GP SR SP +S R DSG+ S+F S Sbjct: 509 PQKLADVSAPSGG---PP---PPHSPYSGPPSRGSPVRQSFRKDSGSS-SVFAES 556
>tr|B1AQX6|B1AQX6_MOUSE P140 gene OS=Mus musculus GN=P140 PE=4 SV=1 Length = 1174
Score = 35.8 bits (81), Expect = 1.1 Identities = 25/55 (45%), Positives = 29/55 (52%) Frame = -1
Query: 331 PQNSSIRSAPSPSRYLPPLTLPPHFVKRGPASRTSPELESLRTDSGAGCSIFVNS 167 PQ + SAPS PP PPH GP SR SP +S R DSG+ S+F S Sbjct: 509 PQKLADVSAPSGG---PP---PPHSPYSGPPSRGSPVRQSFRKDSGSS-SVFAES 556
>tr|A8NZG5|A8NZG5_COPC7 Predicted protein OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=CC1G_08687 PE=4 SV=1 Length = 540
Score = 35.8 bits (81), Expect = 1.1 Identities = 19/51 (37%), Positives = 26/51 (50%) Frame = -1
Query: 418 NEADGGVNWKSTKINTITTSAAVRATSPFPQNSSIRSAPSPSRYLPPLTLP 266 N GVN ST ++ S+ +RA SP Q++S + P PS P T P Sbjct: 238 NLRSAGVNGSSTSLHVRNDSSGMRAPSPLAQSASPPAPPEPSGEPAPTTAP 288
>tr|Q9DWF7|Q9DWF7_RCMVM PR34 OS=Rat cytomegalovirus (strain Maastricht) GN=R34 PE=4 SV=1 Length = 766
Score = 35.4 bits (80), Expect = 1.4 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 3/63 (4%) Frame = -1
Query: 361 SAAVRATSPFPQNSSIRSAPSPSRYLPPLT---LPPHFVKRGPASRTSPELESLRTDSGA 191 + +R PF +SS+ S P+ PPLT +PP +R PA SP + ++D + Sbjct: 594 NGGLRYDDPFSSSSSVCSLPAEILQPPPLTPRPVPPSADRRTPAGSRSPRADEPQSDGSS 653
Query: 190 GCS 182 S Sbjct: 654 SSS 656
>tr|B4JQT6|B4JQT6_DROGR GH13754 OS=Drosophila grimshawi GN=GH13754 PE=4 SV=1 Length = 546
Score = 35.4 bits (80), Expect = 1.4 Identities = 22/56 (39%), Positives = 27/56 (48%) Frame = -1
Query: 379 INTITTSAAVRATSPFPQNSSIRSAPSPSRYLPPLTLPPHFVKRGPASRTSPELES 212 IN SAA A + P + + S SPS L L+ PPH G AS SP + S Sbjct: 177 INQPHLSAAAAAATVAPLPAELLSPSSPSDSLGSLSPPPHHYLHGRASSVSPPMRS 232
>tr|A7EBG8|A7EBG8_SCLS1 Putative uncharacterized protein OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=SS1G_02654 PE=4 SV=1 Length = 717
Score = 35.0 bits (79), Expect = 1.9 Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 3/70 (4%) Frame = -1
Query: 388 STKINTITTSAAVRATSPF---PQNSSIRSAPSPSRYLPPLTLPPHFVKRGPASRTSPEL 218 S ++ +TTS + R TSP PQ++SI S SP+ P+ P RG ++ Sbjct: 244 SPRLANVTTSPSQRPTSPHKSNPQHASISSVRSPTPLASPVLPRPKAGPRGQSANNIHIT 303
Query: 217 ESLRTDSGAG 188 S RT + G Sbjct: 304 HSRRTSADGG 313
>tr|A5G0A9|A5G0A9_ACICJ Putative FHA domain containing protein OS=Acidiphilium cryptum (strain JF-5) GN=Acry_2092 PE=4 SV=1 Length = 463
Score = 34.7 bits (78), Expect = 2.4 Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 4/61 (6%) Frame = -1
Query: 376 NTITTSAAVRATSPFPQNSSIR----SAPSPSRYLPPLTLPPHFVKRGPASRTSPELESL 209 NT + A A SP P + I+ +AP+P LPP LPP V P +P + L Sbjct: 214 NTASAGPAWTAPSPLPPPAEIQPPPPAAPAPPAPLPPAPLPPAPVPAAPVPAGAPGGDLL 273
Query: 208 R 206 R Sbjct: 274 R 274
>tr|A0ZDY5|A0ZDY5_NODSP Putative uncharacterized protein OS=Nodularia spumigena CCY 9414 GN=N9414_15947 PE=4 SV=1 Length = 417
Score = 34.7 bits (78), Expect = 2.4 Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 9/60 (15%) Frame = -1
Query: 424 DYNEADGGVNWKSTKINTITTSAAVRATSPFPQNSS---------IRSAPSPSRYLPPLT 272 D A+GGV+ S +T A T P P S+ + APSP RY PP T Sbjct: 219 DSKLANGGVSNSSPVAGDLTAPLAANNTQPIPSRSTNVVERIYIPVYQAPSPMRYAPPPT 278
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