| DK957849 |
| Clone id |
TST39A01NGRL0029_H05 |
| Library |
TST39 |
| Length |
619 |
| Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0029_H05. 5' end sequence. |
| Accession |
DK957849 |
| Tissue type |
prothallia with plantlets |
| Developmental stage |
gametophytes with sporophytes |
| Contig ID |
CL17Contig1 |
| Sequence |
GGAGCACCGCTCCTGCTTCTGCCTTCTTTGGGGCCTCCCTGAAGAAAACCGCCCCTTCCG
TTGTATCTAGCAATATTGCCAAGCATTTCGTTGTGCACGCTTCGGAGGATGAGGGCAAGC
AGACGAAGAAGGACAGATGGGCTGGTCTTGCATATGACACCTCCGATGACCAGCAAGACA
TCACTCGTGGAAAAGGCATGGTGGACGCTCTTTTCCAAGGTGCAGTTGGTGTAGGAACTC
AACACGCCGTCATGAGTTCGTATGACTATATTAGCCAGGGCCAGAGAATGTTCTCCATGG
ACAACATGAAGGATGGCTATTACATCGCCCCTGCCTTCATGGACAAACTGGTTGTGCACA
TTGCCAAGAACTTCATGAACTTACCAAATATCAAGGTGCCTTTGATTCTTGGTATTTGGG
GTGGCAAGGGGCAAGGCAAGTCCTTCCAGTGTGAGCTTGTCTTTTCAAAGTTGGGAATCA
ACCCAATCATGATGAGTGCCGGAGAGCTCGAGAGTGGCAATGCTGGTGAGCCTGCCAAGC
TTATCAGGCAAAGGTATCGTGAAGCTGCGGACATCATTCAGAAGAAAGGGAAAATGTGCT
GCCTCTTCATTAACGACCT |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q7X999 |
| Definition |
sp|Q7X999|RCA2_LARTR Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Larrea tridentata |
| Align length |
205 |
| Score (bit) |
309.0 |
| E-value |
7.0e-84 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK957849|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0029_H05, 5'
(619 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q7X999|RCA2_LARTR Ribulose bisphosphate carboxylase/oxygenase... 309 7e-84
sp|Q7X9A0|RCA1_LARTR Ribulose bisphosphate carboxylase/oxygenase... 309 7e-84
sp|Q01587|RCA_CUCSA Ribulose bisphosphate carboxylase/oxygenase ... 303 4e-82
sp|P93431|RCA_ORYSJ Ribulose bisphosphate carboxylase/oxygenase ... 303 6e-82
sp|P10896|RCA_ARATH Ribulose bisphosphate carboxylase/oxygenase ... 299 7e-81
sp|O98997|RCA_PHAAU Ribulose bisphosphate carboxylase/oxygenase ... 296 4e-80
sp|Q40281|RCA_MALDO Ribulose bisphosphate carboxylase/oxygenase ... 296 4e-80
sp|O64981|RCA_PHAVU Ribulose bisphosphate carboxylase/oxygenase ... 294 3e-79
sp|Q40460|RCA1_TOBAC Ribulose bisphosphate carboxylase/oxygenase... 293 6e-79
sp|Q40073|RCAA_HORVU Ribulose bisphosphate carboxylase/oxygenase... 291 1e-78
sp|O49074|RCA_SOLPN Ribulose bisphosphate carboxylase/oxygenase ... 290 5e-78
sp|Q40565|RCA2_TOBAC Ribulose bisphosphate carboxylase/oxygenase... 289 9e-78
sp|Q9ZT00|RCA_MAIZE Ribulose bisphosphate carboxylase/oxygenase ... 287 3e-77
sp|Q42450|RCAB_HORVU Ribulose bisphosphate carboxylase/oxygenase... 285 2e-76
sp|P10871|RCA_SPIOL Ribulose bisphosphate carboxylase/oxygenase ... 271 2e-72
sp|P23489|RCA_CHLRE Ribulose bisphosphate carboxylase/oxygenase ... 226 7e-59
sp|Q06721|RCA_ANASC Ribulose bisphosphate carboxylase/oxygenase ... 143 6e-34
sp|P58555|RCA_ANASP Ribulose bisphosphate carboxylase/oxygenase ... 143 8e-34
sp|P85086|RCA_ARAHY Ribulose bisphosphate carboxylase/oxygenase ... 115 1e-25
sp|P85111|RCA_VITSX Ribulose bisphosphate carboxylase/oxygenase ... 57 6e-08
sp|O14325|YB7A_SCHPO Uncharacterized AAA domain-containing prote... 35 0.31
sp|P17556|DHA_BACSH Alanine dehydrogenase OS=Bacillus sphaericus... 35 0.31
sp|O28972|Y1297_ARCFU Cell division cycle protein 48 homolog AF_... 35 0.40
sp|O74445|PRS10_SCHPO Probable 26S protease subunit rpt4 OS=Schi... 34 0.53
sp|Q55EL3|UCKA_DICDI Uridine/cytidine kinase A OS=Dictyostelium ... 33 0.90
sp|Q9Y6K8|KAD5_HUMAN Adenylate kinase isoenzyme 5 OS=Homo sapien... 33 0.90
sp|Q7ZX23|KCY_XENLA UMP-CMP kinase OS=Xenopus laevis GN=cmpk1 PE... 33 1.2
sp|Q4KM73|KCY_RAT UMP-CMP kinase OS=Rattus norvegicus GN=Cmpk1 P... 33 1.2
sp|Q9DBP5|KCY_MOUSE UMP-CMP kinase OS=Mus musculus GN=Cmpk1 PE=1... 33 1.2
sp|P30085|KCY_HUMAN UMP-CMP kinase OS=Homo sapiens GN=CMPK1 PE=1... 33 1.2
>sp|Q7X999|RCA2_LARTR Ribulose bisphosphate carboxylase/oxygenase
activase 2, chloroplastic OS=Larrea tridentata GN=RCA2
PE=2 SV=1
Length = 435
Score = 309 bits (792), Expect = 7e-84
Identities = 152/205 (74%), Positives = 172/205 (83%)
Frame = +3
Query: 3 STAPASAFFGASLKKTAPSVVSSNIAKHFVVHASEDEGKQTKKDRWAGLAYDTSDDQQDI 182
S P++AFFG+SLKK+A ++ +V E +QT KD+W GLAYD SDDQQDI
Sbjct: 26 SLVPSTAFFGSSLKKSAAKFPKASSGNFKIVAQEISEDQQTDKDKWKGLAYDISDDQQDI 85
Query: 183 TRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGYYIAPAFMDKLVVHI 362
TRGKGMVD LFQ + GT +AVMSSYDYISQG R +++DN DG+YIAPAFMDKLVVHI
Sbjct: 86 TRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGLRQYNLDNNMDGFYIAPAFMDKLVVHI 145
Query: 363 AKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGEPAKL 542
KNF++LPNIK+PLILGIWGGKGQGKSFQCELVF+K+GINPIMMSAGELESGNAGEPAKL
Sbjct: 146 TKNFLSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKL 205
Query: 543 IRQRYREAADIIQKKGKMCCLFIND 617
IRQRYREAADII KKGKMCCLFIND
Sbjct: 206 IRQRYREAADII-KKGKMCCLFIND 229
>sp|Q7X9A0|RCA1_LARTR Ribulose bisphosphate carboxylase/oxygenase
activase 1, chloroplastic OS=Larrea tridentata GN=RCA1
PE=2 SV=1
Length = 476
Score = 309 bits (792), Expect = 7e-84
Identities = 152/205 (74%), Positives = 172/205 (83%)
Frame = +3
Query: 3 STAPASAFFGASLKKTAPSVVSSNIAKHFVVHASEDEGKQTKKDRWAGLAYDTSDDQQDI 182
S P++AFFG+SLKK+A ++ +V E +QT KD+W GLAYD SDDQQDI
Sbjct: 26 SLVPSTAFFGSSLKKSAAKFPKASSGNFKIVAQEISEDQQTDKDKWKGLAYDISDDQQDI 85
Query: 183 TRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGYYIAPAFMDKLVVHI 362
TRGKGMVD LFQ + GT +AVMSSYDYISQG R +++DN DG+YIAPAFMDKLVVHI
Sbjct: 86 TRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGLRQYNLDNNMDGFYIAPAFMDKLVVHI 145
Query: 363 AKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGEPAKL 542
KNF++LPNIK+PLILGIWGGKGQGKSFQCELVF+K+GINPIMMSAGELESGNAGEPAKL
Sbjct: 146 TKNFLSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKL 205
Query: 543 IRQRYREAADIIQKKGKMCCLFIND 617
IRQRYREAADII KKGKMCCLFIND
Sbjct: 206 IRQRYREAADII-KKGKMCCLFIND 229
>sp|Q01587|RCA_CUCSA Ribulose bisphosphate carboxylase/oxygenase
activase, chloroplastic OS=Cucumis sativus PE=2 SV=1
Length = 413
Score = 303 bits (777), Expect = 4e-82
Identities = 148/202 (73%), Positives = 169/202 (83%)
Frame = +3
Query: 12 PASAFFGASLKKTAPSVVSSNIAKHFVVHASEDEGKQTKKDRWAGLAYDTSDDQQDITRG 191
P SAF G+ LK ++ S + +F + A +DE KQT+KD+W GLA+DTSDDQQDITRG
Sbjct: 26 PNSAFLGSRLKVSSRFTTSKMVTGNFKIVAEQDEEKQTEKDKWRGLAFDTSDDQQDITRG 85
Query: 192 KGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGYYIAPAFMDKLVVHIAKN 371
KG+ D LFQ +G GT +AV+SSY+YIS G R +S DN DG+YIAPAFMDKL VHI KN
Sbjct: 86 KGLADPLFQAPMGTGTHNAVLSSYEYISAGLRDYSYDNNVDGFYIAPAFMDKLTVHIVKN 145
Query: 372 FMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGEPAKLIRQ 551
F+ LPNIKVPLILG+WGGKGQGKSFQCELVF+K+GINPIMMSAGELESGNAGEPAKLIRQ
Sbjct: 146 FLTLPNIKVPLILGVWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQ 205
Query: 552 RYREAADIIQKKGKMCCLFIND 617
RYREAADII KKGKMCCLFIND
Sbjct: 206 RYREAADII-KKGKMCCLFIND 226
>sp|P93431|RCA_ORYSJ Ribulose bisphosphate carboxylase/oxygenase
activase, chloroplastic OS=Oryza sativa subsp. japonica
GN=RCA PE=1 SV=2
Length = 466
Score = 303 bits (775), Expect = 6e-82
Identities = 157/211 (74%), Positives = 169/211 (80%), Gaps = 8/211 (3%)
Frame = +3
Query: 9 APASA---FFGASLKKTAPSVV-----SSNIAKHFVVHASEDEGKQTKKDRWAGLAYDTS 164
APAS F G LKK S V SSNI + V+ DEGKQT +DRW GLAYD S
Sbjct: 11 APASTPTNFLGKKLKKQVTSAVNYHGKSSNINRFKVMAKELDEGKQTDQDRWKGLAYDIS 70
Query: 165 DDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGYYIAPAFMD 344
DDQQDITRGKG VD+LFQ G GT AV+SSY+Y+SQG R + DN G+YIAPAFMD
Sbjct: 71 DDQQDITRGKGFVDSLFQAPTGDGTHEAVLSSYEYLSQGLRTYDFDNTMGGFYIAPAFMD 130
Query: 345 KLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNA 524
KLVVHI+KNFM LPNIKVPLILGIWGGKGQGKSFQCELVF+K+GINPIMMSAGELESGNA
Sbjct: 131 KLVVHISKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNA 190
Query: 525 GEPAKLIRQRYREAADIIQKKGKMCCLFIND 617
GEPAKLIRQRYREAADII KKGKMCCLFIND
Sbjct: 191 GEPAKLIRQRYREAADII-KKGKMCCLFIND 220
>sp|P10896|RCA_ARATH Ribulose bisphosphate carboxylase/oxygenase
activase, chloroplastic OS=Arabidopsis thaliana GN=RCA
PE=1 SV=2
Length = 474
Score = 299 bits (766), Expect = 7e-81
Identities = 147/204 (72%), Positives = 167/204 (81%)
Frame = +3
Query: 6 TAPASAFFGASLKKTAPSVVSSNIAKHFVVHASEDEGKQTKKDRWAGLAYDTSDDQQDIT 185
+APAS F G + + S+ + + E KQT DRW GLAYDTSDDQQDIT
Sbjct: 27 SAPASTFLGKKVVTVSRFAQSNKKSNGSFKVLAVKEDKQTDGDRWRGLAYDTSDDQQDIT 86
Query: 186 RGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGYYIAPAFMDKLVVHIA 365
RGKGMVD++FQ +G GT HAV+SSY+Y+SQG R +++DNM DG+YIAPAFMDKLVVHI
Sbjct: 87 RGKGMVDSVFQAPMGTGTHHAVLSSYEYVSQGLRQYNLDNMMDGFYIAPAFMDKLVVHIT 146
Query: 366 KNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGEPAKLI 545
KNF+ LPNIKVPLILGIWGGKGQGKSFQCELV +K+GINPIMMSAGELESGNAGEPAKLI
Sbjct: 147 KNFLTLPNIKVPLILGIWGGKGQGKSFQCELVMAKMGINPIMMSAGELESGNAGEPAKLI 206
Query: 546 RQRYREAADIIQKKGKMCCLFIND 617
RQRYREAAD+I KKGKMCCLFIND
Sbjct: 207 RQRYREAADLI-KKGKMCCLFIND 229
>sp|O98997|RCA_PHAAU Ribulose bisphosphate carboxylase/oxygenase
activase, chloroplastic OS=Phaseolus aureus GN=RCA PE=2
SV=2
Length = 439
Score = 296 bits (759), Expect = 4e-80
Identities = 153/210 (72%), Positives = 173/210 (82%), Gaps = 5/210 (2%)
Frame = +3
Query: 3 STAPASAFFGASLKKTAPSVVSSNIAKH--FVVHASE---DEGKQTKKDRWAGLAYDTSD 167
++AP SAFFG SLKK S V ++ + F + A+E +E +QT KDRW GLAYD SD
Sbjct: 25 ASAPTSAFFGTSLKKAVASRVPNSKVTNGSFKIVAAEKEIEESQQTNKDRWKGLAYDISD 84
Query: 168 DQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGYYIAPAFMDK 347
DQQDITRGKGMVD LFQ + GT +AVMSSY+Y+S G R +DN+KDG+YIAPAF+DK
Sbjct: 85 DQQDITRGKGMVDPLFQAPMDAGTHYAVMSSYEYLSTGLRQ--LDNIKDGFYIAPAFLDK 142
Query: 348 LVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAG 527
LVVHI KNFM LPNIKVPLILGIWGGKGQGKSFQCELVF+K+GINPIMMSAGELESGNAG
Sbjct: 143 LVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAG 202
Query: 528 EPAKLIRQRYREAADIIQKKGKMCCLFIND 617
EPAKLIRQRYREAAD+I KGKMC LFIND
Sbjct: 203 EPAKLIRQRYREAADLI-AKGKMCALFIND 231
>sp|Q40281|RCA_MALDO Ribulose bisphosphate carboxylase/oxygenase
activase, chloroplastic OS=Malus domestica GN=RCA PE=2
SV=1
Length = 437
Score = 296 bits (759), Expect = 4e-80
Identities = 149/206 (72%), Positives = 169/206 (82%), Gaps = 1/206 (0%)
Frame = +3
Query: 3 STAPASAFFGASLKKTAPSVVSSNIAKHFV-VHASEDEGKQTKKDRWAGLAYDTSDDQQD 179
++ P+S F G+SLKK +S ++ + + AS DE KQT KDRW GLA+DTSDDQQD
Sbjct: 25 ASVPSSTFLGSSLKKVNSRFTNSKVSSGSLRIVASVDEDKQTDKDRWKGLAFDTSDDQQD 84
Query: 180 ITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGYYIAPAFMDKLVVH 359
ITRGKG VD+LFQ G GT A+MSSY+YIS G R ++ DN DGYYIAPAFMDKLVVH
Sbjct: 85 ITRGKGKVDSLFQAPQGSGTHFAIMSSYEYISTGLRQYNFDNNMDGYYIAPAFMDKLVVH 144
Query: 360 IAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGEPAK 539
I KNFM LPN+KVPLILGIWGGKGQGKSFQCELVF+K+ I+PIMMSAGELESGNAGEPAK
Sbjct: 145 ITKNFMTLPNMKVPLILGIWGGKGQGKSFQCELVFAKMRISPIMMSAGELESGNAGEPAK 204
Query: 540 LIRQRYREAADIIQKKGKMCCLFIND 617
LIRQRYREAADII +KGKMC LFIND
Sbjct: 205 LIRQRYREAADII-RKGKMCALFIND 229
>sp|O64981|RCA_PHAVU Ribulose bisphosphate carboxylase/oxygenase
activase, chloroplastic OS=Phaseolus vulgaris GN=RCA1
PE=2 SV=1
Length = 441
Score = 294 bits (752), Expect = 3e-79
Identities = 147/210 (70%), Positives = 176/210 (83%), Gaps = 5/210 (2%)
Frame = +3
Query: 3 STAPASAFFGASLKKTAPSVVSSN--IAKHFVVHASE---DEGKQTKKDRWAGLAYDTSD 167
++ P+SAFFG SLKK S V ++ + F + A++ +E +QT+ DRW GLAYD SD
Sbjct: 25 ASGPSSAFFGTSLKKVISSRVPNSKLTSGSFKIVAADKEIEETQQTEGDRWRGLAYDVSD 84
Query: 168 DQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGYYIAPAFMDK 347
DQQDITRGKG+VD+LFQ + GT +AV+SS+ Y+S G R ++ DN+KDG+YIAPAF+DK
Sbjct: 85 DQQDITRGKGLVDSLFQAPMDAGTHYAVISSHKYLSAGLRQYNFDNIKDGFYIAPAFLDK 144
Query: 348 LVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAG 527
LVVHIAKNFM LPNIKVPLILG+WGGKGQGKSFQCELVF+K+GINPIMMSAGELESGNAG
Sbjct: 145 LVVHIAKNFMTLPNIKVPLILGVWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAG 204
Query: 528 EPAKLIRQRYREAADIIQKKGKMCCLFIND 617
EPAKLIRQRYREA+D+I KKGKMC LFIND
Sbjct: 205 EPAKLIRQRYREASDLI-KKGKMCVLFIND 233
>sp|Q40460|RCA1_TOBAC Ribulose bisphosphate carboxylase/oxygenase
activase 1, chloroplastic OS=Nicotiana tabacum PE=2 SV=1
Length = 442
Score = 293 bits (749), Expect = 6e-79
Identities = 148/210 (70%), Positives = 167/210 (79%), Gaps = 5/210 (2%)
Frame = +3
Query: 3 STAPASAFFGASLKKTAPSVVSS----NIAKHFVVHASE-DEGKQTKKDRWAGLAYDTSD 167
++ P++AFFG +LKK VSS N + V + D KQT DRW GL D SD
Sbjct: 25 TSVPSTAFFGKTLKKVYGKGVSSPKVTNKSLRIVAEQIDVDPKKQTDSDRWKGLVQDFSD 84
Query: 168 DQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGYYIAPAFMDK 347
DQQDITRGKGMVD+LFQ G GT HAV+ SY+Y+SQG R +++DN DG+YIAPAFMDK
Sbjct: 85 DQQDITRGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLRQYNLDNKLDGFYIAPAFMDK 144
Query: 348 LVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAG 527
LVVHI KNF+ LPNIKVPLILGIWGGKGQGKSFQCELVF K+GINPIMMSAGELESGNAG
Sbjct: 145 LVVHITKNFLKLPNIKVPLILGIWGGKGQGKSFQCELVFRKMGINPIMMSAGELESGNAG 204
Query: 528 EPAKLIRQRYREAADIIQKKGKMCCLFIND 617
EPAKLIRQRYREAA+II +KG MCCLFIND
Sbjct: 205 EPAKLIRQRYREAAEII-RKGNMCCLFIND 233
>sp|Q40073|RCAA_HORVU Ribulose bisphosphate carboxylase/oxygenase
activase A, chloroplastic OS=Hordeum vulgare GN=RCAA
PE=2 SV=1
Length = 464
Score = 291 bits (746), Expect = 1e-78
Identities = 148/210 (70%), Positives = 168/210 (80%), Gaps = 7/210 (3%)
Frame = +3
Query: 9 APASA---FFGASLKKTAPSVVS----SNIAKHFVVHASEDEGKQTKKDRWAGLAYDTSD 167
APAS F G LKK S V+ S+ A F V A+E+ ++ D+W GLAYD SD
Sbjct: 11 APASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDISD 70
Query: 168 DQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGYYIAPAFMDK 347
DQQDITRGKG+VD+LFQ G GT AV+SSY+Y+SQG R + DN G+YIAPAFMDK
Sbjct: 71 DQQDITRGKGIVDSLFQAPTGHGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDK 130
Query: 348 LVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAG 527
LVVH++KNFM LPNIK+PLILGIWGGKGQGKSFQCELVF+K+GINPIMMSAGELESGNAG
Sbjct: 131 LVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAG 190
Query: 528 EPAKLIRQRYREAADIIQKKGKMCCLFIND 617
EPAKLIRQRYREAAD+I KKGKMCCLFIND
Sbjct: 191 EPAKLIRQRYREAADMI-KKGKMCCLFIND 219
|
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
A9PJF4 |
| Definition |
tr|A9PJF4|A9PJF4_POPJC Putative uncharacterized protein OS=Populus jackii |
| Align length |
208 |
| Score (bit) |
314.0 |
| E-value |
2.0e-84 |
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK957849|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0029_H05, 5'
(619 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|A9PJF4|A9PJF4_POPJC Putative uncharacterized protein OS=Popul... 314 2e-84
tr|A9PJ06|A9PJ06_POPJC Putative uncharacterized protein OS=Popul... 314 2e-84
tr|A9PFQ2|A9PFQ2_POPTR Putative uncharacterized protein OS=Popul... 313 7e-84
tr|A7NYV5|A7NYV5_VITVI Chromosome chr6 scaffold_3, whole genome ... 311 1e-83
tr|A5C3D4|A5C3D4_VITVI Putative uncharacterized protein OS=Vitis... 311 2e-83
tr|Q06B51|Q06B51_ACERU Chloroplast ribulose-1,5-bisphosphate car... 310 6e-83
tr|Q06B50|Q06B50_ACERU Chloroplast ribulose-1,5-bisphosphate car... 310 6e-83
tr|A9PGU7|A9PGU7_POPTR Putative uncharacterized protein OS=Popul... 310 6e-83
tr|A9TJI2|A9TJI2_PHYPA Predicted protein OS=Physcomitrella paten... 307 3e-82
tr|A7PNR4|A7PNR4_VITVI Chromosome chr8 scaffold_23, whole genome... 307 3e-82
tr|A7PIQ8|A7PIQ8_VITVI Chromosome chr13 scaffold_17, whole genom... 306 8e-82
tr|Q06B49|Q06B49_ACERU Chloroplast ribulose-1,5-bisphosphate car... 305 1e-81
tr|Q06B48|Q06B48_ACERU Chloroplast ribulose-1,5-bisphosphate car... 305 1e-81
tr|B8BIM0|B8BIM0_ORYSI Putative uncharacterized protein OS=Oryza... 303 7e-81
tr|B7EAB2|B7EAB2_ORYSJ cDNA clone:J013001C24, full insert sequen... 303 7e-81
tr|Q9AXG1|Q9AXG1_GOSHI Ribulose-1,5-bisphosphate carboxylase/oxy... 302 9e-81
tr|A3KN35|A3KN35_BOVIN Putative uncharacterized protein OS=Bos t... 302 1e-80
tr|Q941B7|Q941B7_ARATH At2g39730/T5I7.3 OS=Arabidopsis thaliana ... 299 8e-80
tr|Q3EBJ5|Q3EBJ5_ARATH Uncharacterized protein At2g39730.3 OS=Ar... 299 8e-80
tr|A9NZT0|A9NZT0_PICSI Putative uncharacterized protein OS=Picea... 299 1e-79
tr|A9NX94|A9NX94_PICSI Putative uncharacterized protein OS=Picea... 299 1e-79
tr|A9NV87|A9NV87_PICSI Putative uncharacterized protein OS=Picea... 299 1e-79
tr|Q9M4V3|Q9M4V3_WHEAT Ribulose bisphosphate carboxylase activas... 297 4e-79
tr|Q9ATB9|Q9ATB9_ZANAE Rubisco activase (Fragment) OS=Zantedesch... 297 4e-79
tr|Q8H172|Q8H172_ARATH At2g39730/T5I7.3 OS=Arabidopsis thaliana ... 297 4e-79
tr|O82428|O82428_DATGL Rubisco activase OS=Datisca glomerata PE=... 297 4e-79
tr|A9TBP0|A9TBP0_PHYPA Predicted protein OS=Physcomitrella paten... 297 4e-79
tr|B1PDJ9|B1PDJ9_CAPAN Chloroplast rubisco activase OS=Capsicum ... 296 6e-79
tr|Q7X9A2|Q7X9A2_DESAN Rubisco activase alpha form OS=Deschampsi... 295 1e-78
tr|Q7X9A1|Q7X9A1_DESAN Rubisco activase beta form OS=Deschampsia... 295 1e-78
>tr|A9PJF4|A9PJF4_POPJC Putative uncharacterized protein OS=Populus
jackii PE=2 SV=1
Length = 461
Score = 314 bits (805), Expect = 2e-84
Identities = 159/208 (76%), Positives = 178/208 (85%), Gaps = 3/208 (1%)
Frame = +3
Query: 3 STAPASAFFGASLKKTAPS-VVSSNIAK-HFVVHASE-DEGKQTKKDRWAGLAYDTSDDQ 173
ST P SAFFG SLKK + S +S I+ F V A E DE KQT+KDRW GL D SDDQ
Sbjct: 25 STVPTSAFFGNSLKKVSSSRFTNSKISSGSFKVVAEEYDEEKQTEKDRWGGLVTDMSDDQ 84
Query: 174 QDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGYYIAPAFMDKLV 353
QDITRGKGMVD+LFQ G GT + V+SSY+Y+SQG R +++DNM DGYYIAPAFMDK+V
Sbjct: 85 QDITRGKGMVDSLFQAPQGTGTHNPVLSSYEYLSQGLRTYNLDNMMDGYYIAPAFMDKIV 144
Query: 354 VHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGEP 533
VHI+KNFM+LPNIKVPLILGIWGGKGQGKSFQCELVF+K+GI+PIMMSAGELESGNAGEP
Sbjct: 145 VHISKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGISPIMMSAGELESGNAGEP 204
Query: 534 AKLIRQRYREAADIIQKKGKMCCLFIND 617
AKLIRQRYREAADII+KKGKMCCLFIND
Sbjct: 205 AKLIRQRYREAADIIKKKGKMCCLFIND 232
>tr|A9PJ06|A9PJ06_POPJC Putative uncharacterized protein OS=Populus
jackii PE=2 SV=1
Length = 476
Score = 314 bits (805), Expect = 2e-84
Identities = 158/207 (76%), Positives = 175/207 (84%), Gaps = 2/207 (0%)
Frame = +3
Query: 3 STAPASAFFGASLKKTAPS-VVSSNIAK-HFVVHASEDEGKQTKKDRWAGLAYDTSDDQQ 176
ST P SAFFG SLKK + S +S I+ F V A DE KQT KDRW GL D SDDQQ
Sbjct: 25 STVPNSAFFGNSLKKVSSSRFTNSKISSGSFKVVAEYDEKKQTDKDRWGGLVTDMSDDQQ 84
Query: 177 DITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGYYIAPAFMDKLVV 356
DITRGKGMVD+LFQ G GT + ++SSY+Y+SQG R +++DN DGYYIAPAFMDKLVV
Sbjct: 85 DITRGKGMVDSLFQAPQGTGTHNPILSSYEYLSQGLRTYNLDNNMDGYYIAPAFMDKLVV 144
Query: 357 HIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGEPA 536
HI+KNFM+LPNIKVPLILGIWGGKGQGKSFQCELVF+K+GINPIMMSAGELESGNAGEPA
Sbjct: 145 HISKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPA 204
Query: 537 KLIRQRYREAADIIQKKGKMCCLFIND 617
KLIRQRYREAADII+KKGKMCCLFIND
Sbjct: 205 KLIRQRYREAADIIKKKGKMCCLFIND 231
>tr|A9PFQ2|A9PFQ2_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=2 SV=1
Length = 475
Score = 313 bits (801), Expect = 7e-84
Identities = 158/208 (75%), Positives = 178/208 (85%), Gaps = 3/208 (1%)
Frame = +3
Query: 3 STAPASAFFGASLKKTAPS-VVSSNIAK-HFVVHASE-DEGKQTKKDRWAGLAYDTSDDQ 173
ST P SAFFG SLKK + S +S I+ F V A E DE KQT+KDRW GL D SDDQ
Sbjct: 25 STVPTSAFFGNSLKKVSSSRFTNSKISSGSFKVVAEEYDEEKQTEKDRWGGLVTDMSDDQ 84
Query: 174 QDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGYYIAPAFMDKLV 353
QDITRGKGMVD+LFQ G GT + V+SSY+Y+SQG R +++DNM DG+YIAPAFMDK+V
Sbjct: 85 QDITRGKGMVDSLFQAPQGTGTHNPVLSSYEYLSQGLRTYNLDNMMDGFYIAPAFMDKIV 144
Query: 354 VHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGEP 533
VHI+KNFM+LPNIKVPLILGIWGGKGQGKSFQCELVF+K+GI+PIMMSAGELESGNAGEP
Sbjct: 145 VHISKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGISPIMMSAGELESGNAGEP 204
Query: 534 AKLIRQRYREAADIIQKKGKMCCLFIND 617
AKLIRQRYREAADII+KKGKMCCLFIND
Sbjct: 205 AKLIRQRYREAADIIKKKGKMCCLFIND 232
>tr|A7NYV5|A7NYV5_VITVI Chromosome chr6 scaffold_3, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00024270001
PE=4 SV=1
Length = 472
Score = 311 bits (798), Expect = 1e-83
Identities = 156/206 (75%), Positives = 174/206 (84%), Gaps = 1/206 (0%)
Frame = +3
Query: 3 STAPASAFFGASLKKTAPSVVSSNIAK-HFVVHASEDEGKQTKKDRWAGLAYDTSDDQQD 179
++ P+SAFFG+SLKK + IA F V A DE +QT+KDRW GLAYD SDDQQD
Sbjct: 25 ASVPSSAFFGSSLKKVSSRFTHPKIASGSFKVVAEIDENEQTEKDRWKGLAYDVSDDQQD 84
Query: 180 ITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGYYIAPAFMDKLVVH 359
ITRGKGMVD+LFQ + GT +AVMSSY+Y+S G R +++DN DG+YIAPAFMDKLVVH
Sbjct: 85 ITRGKGMVDSLFQAPMQSGTHYAVMSSYEYLSTGLRQYNLDNNMDGFYIAPAFMDKLVVH 144
Query: 360 IAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGEPAK 539
I KNFM LPNIKVPLILGIWGGKGQGKSFQCELVFSK+GINPIMMSAGELESGNAGEPAK
Sbjct: 145 ITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFSKMGINPIMMSAGELESGNAGEPAK 204
Query: 540 LIRQRYREAADIIQKKGKMCCLFIND 617
LIRQRYREAADII +KGKMCCLFIND
Sbjct: 205 LIRQRYREAADII-RKGKMCCLFIND 229
>tr|A5C3D4|A5C3D4_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_039112 PE=4 SV=1
Length = 472
Score = 311 bits (797), Expect = 2e-83
Identities = 156/205 (76%), Positives = 173/205 (84%), Gaps = 1/205 (0%)
Frame = +3
Query: 6 TAPASAFFGASLKKTAPSVVSSNIAK-HFVVHASEDEGKQTKKDRWAGLAYDTSDDQQDI 182
+ P+SAFFG+SLKK + IA F V A DE +QT+KDRW GLAYD SDDQQDI
Sbjct: 26 SVPSSAFFGSSLKKVSSRFTHPKIASGSFKVVAEIDENEQTEKDRWKGLAYDVSDDQQDI 85
Query: 183 TRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGYYIAPAFMDKLVVHI 362
TRGKGMVD+LFQ + GT +AVMSSY+Y+S G R +++DN DG+YIAPAFMDKLVVHI
Sbjct: 86 TRGKGMVDSLFQAPMQSGTHYAVMSSYEYLSTGLRQYNLDNNMDGFYIAPAFMDKLVVHI 145
Query: 363 AKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGEPAKL 542
KNFM LPNIKVPLILGIWGGKGQGKSFQCELVFSK+GINPIMMSAGELESGNAGEPAKL
Sbjct: 146 TKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFSKMGINPIMMSAGELESGNAGEPAKL 205
Query: 543 IRQRYREAADIIQKKGKMCCLFIND 617
IRQRYREAADII +KGKMCCLFIND
Sbjct: 206 IRQRYREAADII-RKGKMCCLFIND 229
>tr|Q06B51|Q06B51_ACERU Chloroplast ribulose-1,5-bisphosphate
carboxylase/oxygenase activase small protein isoform
OS=Acer rubrum PE=2 SV=1
Length = 437
Score = 310 bits (793), Expect = 6e-83
Identities = 157/206 (76%), Positives = 173/206 (83%), Gaps = 1/206 (0%)
Frame = +3
Query: 3 STAPASAFFGASLKKTAPSVVSSNI-AKHFVVHASEDEGKQTKKDRWAGLAYDTSDDQQD 179
ST P SAFFG SLKK A + + + F V A DE KQT+KD+W GLAYDTSDDQQD
Sbjct: 26 STVPTSAFFGTSLKKVASRFPNPKVHSGSFKVVAEIDENKQTEKDKWRGLAYDTSDDQQD 85
Query: 180 ITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGYYIAPAFMDKLVVH 359
ITRGKG+VD+LFQ G GT +AVMSSYDYIS G R + ++N DG+YIAPAFMDKLVVH
Sbjct: 86 ITRGKGLVDSLFQAPSGTGTHYAVMSSYDYISTGLRTY-LENSMDGFYIAPAFMDKLVVH 144
Query: 360 IAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGEPAK 539
I KNFM+LPNIK+PLILGIWGGKGQGKSFQCELVF+K+GI PIMMSAGELESGNAGEPAK
Sbjct: 145 ITKNFMSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGITPIMMSAGELESGNAGEPAK 204
Query: 540 LIRQRYREAADIIQKKGKMCCLFIND 617
LIRQRYREAADII KKGKMCCLFIND
Sbjct: 205 LIRQRYREAADII-KKGKMCCLFIND 229
>tr|Q06B50|Q06B50_ACERU Chloroplast ribulose-1,5-bisphosphate
carboxylase/oxygenase activase large protein isoform
OS=Acer rubrum PE=2 SV=1
Length = 474
Score = 310 bits (793), Expect = 6e-83
Identities = 157/206 (76%), Positives = 173/206 (83%), Gaps = 1/206 (0%)
Frame = +3
Query: 3 STAPASAFFGASLKKTAPSVVSSNI-AKHFVVHASEDEGKQTKKDRWAGLAYDTSDDQQD 179
ST P SAFFG SLKK A + + + F V A DE KQT+KD+W GLAYDTSDDQQD
Sbjct: 26 STVPTSAFFGTSLKKVASRFPNPKVHSGSFKVVAEIDENKQTEKDKWRGLAYDTSDDQQD 85
Query: 180 ITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGYYIAPAFMDKLVVH 359
ITRGKG+VD+LFQ G GT +AVMSSYDYIS G R + ++N DG+YIAPAFMDKLVVH
Sbjct: 86 ITRGKGLVDSLFQAPSGTGTHYAVMSSYDYISTGLRTY-LENSMDGFYIAPAFMDKLVVH 144
Query: 360 IAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGEPAK 539
I KNFM+LPNIK+PLILGIWGGKGQGKSFQCELVF+K+GI PIMMSAGELESGNAGEPAK
Sbjct: 145 ITKNFMSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGITPIMMSAGELESGNAGEPAK 204
Query: 540 LIRQRYREAADIIQKKGKMCCLFIND 617
LIRQRYREAADII KKGKMCCLFIND
Sbjct: 205 LIRQRYREAADII-KKGKMCCLFIND 229
>tr|A9PGU7|A9PGU7_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=2 SV=1
Length = 476
Score = 310 bits (793), Expect = 6e-83
Identities = 155/207 (74%), Positives = 175/207 (84%), Gaps = 2/207 (0%)
Frame = +3
Query: 3 STAPASAFFGASLKKTAPS-VVSSNIAK-HFVVHASEDEGKQTKKDRWAGLAYDTSDDQQ 176
ST P SAFFG SLKK + S +S I+ F V A DE KQT KDRW GL D SDDQQ
Sbjct: 25 STVPNSAFFGNSLKKVSSSRFTNSKISPGSFKVVAEYDEKKQTDKDRWGGLVTDMSDDQQ 84
Query: 177 DITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGYYIAPAFMDKLVV 356
DI+RGKGMVD+LFQ G GT + V++SY+Y+SQG R +++DN DG+YIAPAFMDKLVV
Sbjct: 85 DISRGKGMVDSLFQAPQGTGTHNPVLNSYEYLSQGLRTYNLDNNMDGFYIAPAFMDKLVV 144
Query: 357 HIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGEPA 536
HI+KNFM+LPNIKVPLILG+WGGKGQGKSFQCELVF+K+GINPIMMSAGELESGNAGEPA
Sbjct: 145 HISKNFMSLPNIKVPLILGVWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPA 204
Query: 537 KLIRQRYREAADIIQKKGKMCCLFIND 617
KLIRQRYREAADII+KKGKMCCLFIND
Sbjct: 205 KLIRQRYREAADIIKKKGKMCCLFIND 231
>tr|A9TJI2|A9TJI2_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_195670 PE=4 SV=1
Length = 471
Score = 307 bits (787), Expect = 3e-82
Identities = 157/205 (76%), Positives = 172/205 (83%)
Frame = +3
Query: 3 STAPASAFFGASLKKTAPSVVSSNIAKHFVVHASEDEGKQTKKDRWAGLAYDTSDDQQDI 182
ST P+SAFFG K +A + K VV +E E +TK DRWAGL D SDDQQDI
Sbjct: 20 STVPSSAFFGCKSKVSANGTLGIANGKSRVV--AEAESSKTKVDRWAGLGNDISDDQQDI 77
Query: 183 TRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGYYIAPAFMDKLVVHI 362
RGKGMVDALFQGA G+GTQ+A+MSS+ Y+SQGQR +SMDN+KDG YIAPAFMDKLV+HI
Sbjct: 78 QRGKGMVDALFQGAQGLGTQNAIMSSWGYVSQGQRTYSMDNIKDGLYIAPAFMDKLVIHI 137
Query: 363 AKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGEPAKL 542
AKNFMNLP IKVPLILGIWGGKGQGKSFQCELV SKLGINPI+MSAGELESGNAGEPAKL
Sbjct: 138 AKNFMNLPGIKVPLILGIWGGKGQGKSFQCELVMSKLGINPIVMSAGELESGNAGEPAKL 197
Query: 543 IRQRYREAADIIQKKGKMCCLFIND 617
IRQRYREAAD+I KKGKMC LFIND
Sbjct: 198 IRQRYREAADVI-KKGKMCALFIND 221
>tr|A7PNR4|A7PNR4_VITVI Chromosome chr8 scaffold_23, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00021361001
PE=4 SV=1
Length = 474
Score = 307 bits (787), Expect = 3e-82
Identities = 153/206 (74%), Positives = 172/206 (83%), Gaps = 1/206 (0%)
Frame = +3
Query: 3 STAPASAFFGASLKKTAPSVVSSNIAK-HFVVHASEDEGKQTKKDRWAGLAYDTSDDQQD 179
++ P+SAF G SLKK + + + +F V A DE KQT KD+W GLA+D SDDQQD
Sbjct: 25 ASVPSSAFLGNSLKKVSSKIAHPRTSSGNFKVVAEVDEEKQTSKDKWKGLAFDESDDQQD 84
Query: 180 ITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGYYIAPAFMDKLVVH 359
ITRGKGMVD+LFQ + GT +AVMSSYDYIS G R +++DN DG+YIAPAFMDKLVVH
Sbjct: 85 ITRGKGMVDSLFQAPMDSGTHYAVMSSYDYISTGLRQYNLDNTMDGFYIAPAFMDKLVVH 144
Query: 360 IAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGEPAK 539
I KNFM LPNIKVPLILGIWGGKGQGKSFQCELVF+K+GINPIMMSAGELESGNAGEPAK
Sbjct: 145 ITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAK 204
Query: 540 LIRQRYREAADIIQKKGKMCCLFIND 617
LIRQRYREAADII +KGKMCCLFIND
Sbjct: 205 LIRQRYREAADII-RKGKMCCLFIND 229
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