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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK957850
Clone id TST39A01NGRL0029_H06
Library
Length 662
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0029_H06. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
ATATCGGGCTGCGTCTCCTTGACACCGGGGCTTGCCATTTTCATCCTGCTCTGCACATTT
CTTCATACTCCCAAGCTCCTCTCCCAGCTGCTCTGCAGTACTTCTCTGCATTCTATTTCG
CCACCATCTTTTGCATATACGTAGATCTCCTAGCACTGCGTTTGATTTGCTTCTTTTCAA
TACAGCTATGGGCTTTCGGATTGTGCCCGCGCTGCTTGTAGCTTTTGCTTGCATCCATTA
CGTAGCGCTCGCTTCTATCGACGATAACCTCGCTGCCAGCGCCAAGAAATACAAATCCTG
CAAGAAGAGGGCTGCCACTCTCTGCGGGCCTAGCTCCTTCACCTTCTACCTGCACAACAC
CGTCTACAACCCCGCCGTCGACAACGCCAATAACTTCACCTCTGTGTATGGCGTGCAACC
TAATGTGACGTGGACCAATACCTACGCCTTCGGCACCACCTCCACATTCGAGGACCCGCT
CACAAGCGGGCCCGCCACCGACTCGCAGCAGATAGGCGTAGCTCACGGCTTCTGGCAGCT
CAACAGCAAGGTAGGCTACACTCTCTTCCACATCTTCACCGCCAACATTACCGAGGGCGA
CCACAAGGGCACCATCGACATCTTTGGCCAGGTTCGCGAGATCGACCCCGTCCGCTACCT
CA
■■Homology search results ■■ -
sp_hit_id P13240
Definition sp|P13240|DR206_PEA Disease resistance response protein 206 OS=Pisum sativum
Align length 102
Score (bit) 53.1
E-value 1.0e-06
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK957850|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0029_H06, 5'
         (662 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P13240|DR206_PEA Disease resistance response protein 206 OS=P...    53   1e-06
sp|Q98NF9|ADEC_RHILO Adenine deaminase OS=Rhizobium loti GN=ade ...    35   0.46 
sp|Q9NZV5|SELN_HUMAN Selenoprotein N OS=Homo sapiens GN=SEPN1 PE...    30   8.7  
sp|Q7S785|LKHA4_NEUCR Leukotriene A-4 hydrolase OS=Neurospora cr...    30   8.7  

>sp|P13240|DR206_PEA Disease resistance response protein 206
           OS=Pisum sativum GN=PI206 PE=2 SV=2
          Length = 184

 Score = 53.1 bits (126), Expect = 1e-06
 Identities = 34/102 (33%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
 Frame = +2

Query: 335 SFTFYLHNTVYNPAVDNANNFTSVYGVQPNVTWTNTYA----FGTTSTFEDPLTSGPATD 502
           +  FY H+ +YN    NA N TS     P        A    FG    F+DP+T   +  
Sbjct: 33  NLVFYFHDILYNGK--NAANATSAIVAAPEGVSLTKLAPQSHFGNIIVFDDPITLSHSLS 90

Query: 503 SQQIGVAHGFWQLNSKVGYTLFHIFTANITEGDHKGTIDIFG 628
           S+Q+G A GF+  ++K  YT +  FT  +    H+GTI   G
Sbjct: 91  SKQVGRAQGFYIYDTKNTYTSWLSFTFVLNSTHHQGTITFAG 132


>sp|Q98NF9|ADEC_RHILO Adenine deaminase OS=Rhizobium loti GN=ade
           PE=3 SV=1
          Length = 605

 Score = 34.7 bits (78), Expect = 0.46
 Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 7/97 (7%)
 Frame = +2

Query: 371 PAVDNANNFTSVYGVQPNVTWTNTYAFGTTSTF-----EDPLTSGPATDSQQIGVAHGFW 535
           P +++A    +V  V   +TW N    G    F      DP+ SG    + + G   G  
Sbjct: 162 PGLEHAGAELTVADVAEAMTWENIIGLGEVMNFPGVAANDPVMSGEIAATVRAGKTVGGH 221

Query: 536 QLNSKVGYTLFHIFTANITEGDHKGT--IDIFGQVRE 640
             +  +G   FH + A   E DH+GT   D   +VR+
Sbjct: 222 YASRDLGLP-FHGYVAGGPEDDHEGTRAEDAIARVRQ 257


>sp|Q9NZV5|SELN_HUMAN Selenoprotein N OS=Homo sapiens GN=SEPN1 PE=1
           SV=4
          Length = 590

 Score = 30.4 bits (67), Expect = 8.7
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = +2

Query: 383 NANNFTSVYGVQPNVTWTNTYAFGTTSTFEDPLTS 487
           NAN F  +  V+P    +N ++F  +STFEDP T+
Sbjct: 539 NANYFLDITSVKPEEIESNLFSF--SSTFEDPSTA 571


>sp|Q7S785|LKHA4_NEUCR Leukotriene A-4 hydrolase OS=Neurospora
           crassa GN=NCU06732 PE=3 SV=1
          Length = 614

 Score = 30.4 bits (67), Expect = 8.7
 Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
 Frame = +2

Query: 428 TWTNTYAF---GTTSTFEDPLTSGPATDSQQIGVAHGFWQL-NSKVGYTLFHIFTANITE 595
           +WT             FE+PLT      SQ +G A+G  +  N+++    +HI   +   
Sbjct: 492 SWTGNQVLVFLNAVQDFEEPLT---VEQSQALGKAYGLSESKNAELKAAYYHIAMRSKDA 548

Query: 596 GDHKGTIDIFGQVREIDPVRYL 661
             ++G  D+ G+V  +  VR L
Sbjct: 549 SAYQGVADLLGEVGRMKFVRPL 570
tr_hit_id B2WS85
Definition tr|B2WS85|B2WS85_9BRAS Disease resistance-responsive family protein OS=Capsella rubella
Align length 108
Score (bit) 54.7
E-value 5.0e-06
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK957850|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0029_H06, 5'
         (662 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B2WS85|B2WS85_9BRAS Disease resistance-responsive family prot...    55   5e-06
tr|A8IXC9|A8IXC9_BRACM Disease resistance response protein OS=Br...    53   2e-05
tr|Q9T017|Q9T017_ARATH Putative disease resistance response prot...    52   3e-05
tr|Q9SDQ9|Q9SDQ9_THUPL Dirigent protein OS=Thuja plicata GN=psd_...    52   3e-05
tr|B2WS65|B2WS65_ARAHA Putative disease resistance protein OS=Ar...    52   3e-05
tr|Q9SUQ8|Q9SUQ8_ARATH Putative disease resistance response prot...    52   4e-05
tr|Q9SDQ8|Q9SDQ8_THUPL Dirigent-like protein OS=Thuja plicata GN...    51   6e-05
tr|Q9SYU1|Q9SYU1_PEA Pathogenesis-related protein OS=Pisum sativ...    51   7e-05
tr|Q9SDR1|Q9SDR1_THUPL Dirigent-like protein OS=Thuja plicata GN...    50   1e-04
tr|Q9SDR0|Q9SDR0_THUPL Dirigent-like protein OS=Thuja plicata GN...    50   1e-04
tr|Q943Q0|Q943Q0_ORYSJ Putative uncharacterized protein P0011G08...    50   1e-04
tr|A2ZPF2|A2ZPF2_ORYSJ Putative uncharacterized protein OS=Oryza...    50   1e-04
tr|Q9SDR5|Q9SDR5_THUPL Dirigent-like protein OS=Thuja plicata GN...    50   2e-04
tr|Q9SDR2|Q9SDR2_THUPL Dirigent-like protein OS=Thuja plicata GN...    50   2e-04
tr|Q27J96|Q27J96_PICSI Dirigent protein pDIR16 OS=Picea sitchens...    49   3e-04
tr|A7NXR4|A7NXR4_VITVI Chromosome chr5 scaffold_2, whole genome ...    49   3e-04
tr|A2WKV1|A2WKV1_ORYSI Putative uncharacterized protein OS=Oryza...    49   3e-04
tr|Q9SH66|Q9SH66_ARATH F22C12.8 (Putative dirigent protein) (At1...    49   4e-04
tr|Q9SDR3|Q9SDR3_THUPL Dirigent-like protein OS=Thuja plicata GN...    48   5e-04
tr|Q27JA4|Q27JA4_9CONI Dirigent protein pDIR8 OS=Picea engelmann...    48   6e-04
tr|A6YR10|A6YR10_PICSI Dirigent-like protein OS=Picea sitchensis...    48   6e-04
tr|A6YR09|A6YR09_PICSI Dirigent-like protein OS=Picea sitchensis...    47   8e-04
tr|Q27JA9|Q27JA9_9CONI Dirigent-like protein pDIR3 OS=Picea enge...    47   0.001
tr|Q27J97|Q27J97_PICSI Dirigent protein pDIR15 OS=Picea sitchens...    47   0.001
tr|Q27J94|Q27J94_PICGL Dirigent protein pDIR18 OS=Picea glauca P...    47   0.001
tr|A6YQZ8|A6YQZ8_PICSI Dirigent-like protein (Putative uncharact...    47   0.001
tr|Q9FIG7|Q9FIG7_ARATH Disease resistance response protein-like ...    47   0.001
tr|A7P884|A7P884_VITVI Chromosome chr3 scaffold_8, whole genome ...    47   0.001
tr|A7NXR5|A7NXR5_VITVI Chromosome chr5 scaffold_2, whole genome ...    47   0.001
tr|Q9FIG6|Q9FIG6_ARATH Similarity to disease resistance response...    46   0.002

>tr|B2WS85|B2WS85_9BRAS Disease resistance-responsive family protein
           OS=Capsella rubella GN=6J23.5 PE=4 SV=1
          Length = 187

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 33/108 (30%), Positives = 52/108 (48%)
 Frame = +2

Query: 338 FTFYLHNTVYNPAVDNANNFTSVYGVQPNVTWTNTYAFGTTSTFEDPLTSGPATDSQQIG 517
           F+FY H+ +Y+   DN  N TS   V P       + FG    F+DP+T      S+ + 
Sbjct: 43  FSFYFHDILYDG--DNVANATSAAIVSP--PGLGNFKFGKFVIFDDPITMDKNYLSEPVA 98

Query: 518 VAHGFWQLNSKVGYTLFHIFTANITEGDHKGTIDIFGQVREIDPVRYL 661
            A GF+  + K+ +  +  +T       HKGT++I G    ++P R L
Sbjct: 99  RAQGFYFYDMKMDFNAWFCYTLVFNSTQHKGTLNIMGADLMMEPTRDL 146


>tr|A8IXC9|A8IXC9_BRACM Disease resistance response protein
           OS=Brassica campestris PE=2 SV=1
          Length = 187

 Score = 52.8 bits (125), Expect = 2e-05
 Identities = 33/108 (30%), Positives = 51/108 (47%)
 Frame = +2

Query: 338 FTFYLHNTVYNPAVDNANNFTSVYGVQPNVTWTNTYAFGTTSTFEDPLTSGPATDSQQIG 517
           F+FY H+ +Y+   DN  N TS   V P       + FG    F+ P+T      S+ + 
Sbjct: 43  FSFYFHDILYDG--DNVANATSAAIVSP--PGLGNFKFGKFVIFDGPITMDKNYLSEPVA 98

Query: 518 VAHGFWQLNSKVGYTLFHIFTANITEGDHKGTIDIFGQVREIDPVRYL 661
            A GF+  + K  +  +  FT      +HKGT++I G    ++P R L
Sbjct: 99  RAQGFYFYDMKTDFNSWFSFTLVFNSTEHKGTLNIMGADLMMEPTRDL 146


>tr|Q9T017|Q9T017_ARATH Putative disease resistance response protein
           (At4g11190) OS=Arabidopsis thaliana GN=AT4g11190 PE=2
           SV=1
          Length = 184

 Score = 52.4 bits (124), Expect = 3e-05
 Identities = 32/108 (29%), Positives = 51/108 (47%)
 Frame = +2

Query: 338 FTFYLHNTVYNPAVDNANNFTSVYGVQPNVTWTNTYAFGTTSTFEDPLTSGPATDSQQIG 517
           F FYLHN  Y+   DN +N TS   V P       ++FG     ++P+T      S+Q+ 
Sbjct: 39  FVFYLHNVAYDG--DNTDNATSAAIVNP--LGLGDFSFGKFVIMDNPVTMDQNMLSEQVA 94

Query: 518 VAHGFWQLNSKVGYTLFHIFTANITEGDHKGTIDIFGQVREIDPVRYL 661
              GF+  + K  Y  +  ++       HKG ++I G+   ++P R L
Sbjct: 95  RVQGFFFYHGKTKYDTWLSWSVVFNSTQHKGALNIMGENAFMEPTRDL 142


>tr|Q9SDQ9|Q9SDQ9_THUPL Dirigent protein OS=Thuja plicata GN=psd_Tp7
           PE=2 SV=1
          Length = 192

 Score = 52.4 bits (124), Expect = 3e-05
 Identities = 35/102 (34%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
 Frame = +2

Query: 335 SFTFYLHNTVYNPAVDNANNFTSVYGVQP---NVT-WTNTYAFGTTSTFEDPLTSGPATD 502
           +   Y H+ +YN    NA N TS     P   N+T  T  Y FG  S F+DP+T      
Sbjct: 41  NLVLYFHDIIYNGK--NAGNATSTLVAAPQGANLTIMTGNYHFGDLSVFDDPITVDNNLH 98

Query: 503 SQQIGVAHGFWQLNSKVGYTLFHIFTANITEGDHKGTIDIFG 628
           S  +G A GF+  + K  ++ +  FT  +   D+KGTI   G
Sbjct: 99  SPPVGRAQGFYFYDMKNTFSAWLGFTFVLNSTDYKGTITFGG 140


>tr|B2WS65|B2WS65_ARAHA Putative disease resistance protein
           OS=Arabidopsis halleri GN=8F2.4 PE=4 SV=1
          Length = 187

 Score = 52.0 bits (123), Expect = 3e-05
 Identities = 32/108 (29%), Positives = 52/108 (48%)
 Frame = +2

Query: 338 FTFYLHNTVYNPAVDNANNFTSVYGVQPNVTWTNTYAFGTTSTFEDPLTSGPATDSQQIG 517
           F+FY H+ +Y+   DN  N TS   V P       + FG    F+ P+T      S+ + 
Sbjct: 43  FSFYFHDILYDG--DNVANATSAAIVSP--PGLGNFKFGKFVIFDGPITMDKNYLSKPLA 98

Query: 518 VAHGFWQLNSKVGYTLFHIFTANITEGDHKGTIDIFGQVREIDPVRYL 661
            A GF+  + K+ +  +  +T      +HKGT++I G    ++P R L
Sbjct: 99  RAQGFYFYDMKMDFNAWFCYTLVFNSTEHKGTLNIMGADLMMEPTRDL 146


>tr|Q9SUQ8|Q9SUQ8_ARATH Putative disease resistance response protein
           OS=Arabidopsis thaliana GN=F9D16.160 PE=2 SV=1
          Length = 187

 Score = 51.6 bits (122), Expect = 4e-05
 Identities = 32/108 (29%), Positives = 52/108 (48%)
 Frame = +2

Query: 338 FTFYLHNTVYNPAVDNANNFTSVYGVQPNVTWTNTYAFGTTSTFEDPLTSGPATDSQQIG 517
           F+FY H+ +Y+   DN  N TS   V P       + FG    F+ P+T      S+ + 
Sbjct: 43  FSFYFHDILYDG--DNVANATSAAIVSP--PGLGNFKFGKFVIFDGPITMDKNYLSKPVA 98

Query: 518 VAHGFWQLNSKVGYTLFHIFTANITEGDHKGTIDIFGQVREIDPVRYL 661
            A GF+  + K+ +  +  +T      +HKGT++I G    ++P R L
Sbjct: 99  RAQGFYFYDMKMDFNSWFSYTLVFNSTEHKGTLNIMGADLMMEPTRDL 146


>tr|Q9SDQ8|Q9SDQ8_THUPL Dirigent-like protein OS=Thuja plicata
           GN=psd_Tp8 PE=2 SV=1
          Length = 192

 Score = 51.2 bits (121), Expect = 6e-05
 Identities = 34/102 (33%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
 Frame = +2

Query: 335 SFTFYLHNTVYNPAVDNANNFTSVYGVQP---NVT-WTNTYAFGTTSTFEDPLTSGPATD 502
           +   Y H+ +YN    NA N TS     P   N+T  T  Y FG  + F+DP+T      
Sbjct: 41  NLVLYFHDIIYNGK--NAGNATSTLVAAPQGANLTIMTGNYHFGDLAVFDDPITVDNNLH 98

Query: 503 SQQIGVAHGFWQLNSKVGYTLFHIFTANITEGDHKGTIDIFG 628
           S  +G A GF+  + K  ++ +  FT  +   D+KGTI   G
Sbjct: 99  SPPVGRAQGFYFYDMKNTFSAWLGFTFVLNSTDYKGTITFGG 140


>tr|Q9SYU1|Q9SYU1_PEA Pathogenesis-related protein OS=Pisum sativum
           GN=DRR206-c PE=4 SV=1
          Length = 184

 Score = 50.8 bits (120), Expect = 7e-05
 Identities = 33/102 (32%), Positives = 47/102 (46%), Gaps = 4/102 (3%)
 Frame = +2

Query: 335 SFTFYLHNTVYNPAVDNANNFTSVYGVQPNVTWTNTYA----FGTTSTFEDPLTSGPATD 502
           +   Y H+ +YN    NA N TS     P        A    FG    F+DP+T   +  
Sbjct: 33  NLVLYFHDILYNGK--NAANATSAIVAAPEGVSLTKLAPQSHFGNIIVFDDPITLSHSLS 90

Query: 503 SQQIGVAHGFWQLNSKVGYTLFHIFTANITEGDHKGTIDIFG 628
           S+Q+G A GF+  ++K  YT +  FT  +    H+GTI   G
Sbjct: 91  SKQVGRAQGFYIYDTKNTYTSWLSFTFVLNSTHHQGTITFAG 132


>tr|Q9SDR1|Q9SDR1_THUPL Dirigent-like protein OS=Thuja plicata
           GN=psd_Tp5 PE=2 SV=1
          Length = 190

 Score = 50.4 bits (119), Expect = 1e-04
 Identities = 34/102 (33%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
 Frame = +2

Query: 335 SFTFYLHNTVYNPAVDNANNFTSVYGVQP---NVT-WTNTYAFGTTSTFEDPLTSGPATD 502
           +   Y H+ +YN    NA N TS     P   N+T  T    FG  + F+DP+T      
Sbjct: 39  NLVLYFHDIIYNGK--NAENATSALVAAPEGANLTIMTGNNHFGNLAVFDDPITLDNNLH 96

Query: 503 SQQIGVAHGFWQLNSKVGYTLFHIFTANITEGDHKGTIDIFG 628
           S  +G A GF+  + K  ++ +  FT  +   DHKGTI   G
Sbjct: 97  SPPVGRAQGFYFYDMKNTFSAWLGFTFVLNSTDHKGTITFNG 138


>tr|Q9SDR0|Q9SDR0_THUPL Dirigent-like protein OS=Thuja plicata
           GN=psd_Tp6 PE=2 SV=1
          Length = 190

 Score = 50.4 bits (119), Expect = 1e-04
 Identities = 34/102 (33%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
 Frame = +2

Query: 335 SFTFYLHNTVYNPAVDNANNFTSVYGVQP---NVT-WTNTYAFGTTSTFEDPLTSGPATD 502
           +   Y H+ +YN    NA N TS     P   N+T  T    FG  + F+DP+T      
Sbjct: 39  NLVLYFHDIIYNGK--NAENATSALVAAPEGANLTIMTGNNHFGNLAVFDDPITLDNNLH 96

Query: 503 SQQIGVAHGFWQLNSKVGYTLFHIFTANITEGDHKGTIDIFG 628
           S  +G A GF+  + K  ++ +  FT  +   DHKGTI   G
Sbjct: 97  SPPVGRAQGFYFYDMKNTFSAWLGFTFVLNSTDHKGTITFNG 138