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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK957872
Clone id TST39A01NGRL0029_I04
Library
Length 583
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0029_I04. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GTCCGTGTCTGCATCGCGAGGATGAAGGCGGGCGCCATTTCTGCAAACAAGGCTCCATGA
ATGCTCTTGCGGGTGATGCAGAAGGCCTGTCTTGTCGTGTAGTTGAGGAGGAGCTGTAGC
CCCTAGCGTGATGGTTGTTGTGCAAGGCGTTCGATTCCTTTTGATGTGCATCCCGAGGAT
GAAGTCGGTCGTCATCTCTGTGAAGTAAGGCGAGATTAATGATGATGCAGAAGGGCTGCG
GTGTCCGGTTGTTGGGGATGCTCTAGCGCATAGGATGCCTCATGGGAGGGTCTTTTTCAC
CGTGTAGTTTTTTGTGCCTACAACGTTGCTGAGGATCTGCTATCTGGTGCTGCGAGCAAT
AGTGTGTGTGCTTGTATAAGAGGAGGCGGTTGCCTCTTTCTCTCTCCATCTGAGTCTGCC
TCTTTGTCTCCATATGAATGCGTGATAGCATCTAGAGTGTTGCTGCTAATGGCTTGAAAC
CAGGACAGTGGGAGTTCATGTGCTGGCGAAGCGGAAGAATGATGCATTAGCAATGGTGAT
TCTCTGGGTGCTCAGAGCATGGACTTGGAAGGGGGTGAGCTCC
■■Homology search results ■■ -
sp_hit_id P13728
Definition sp|P13728|SGS3_DROYA Salivary glue protein Sgs-3 OS=Drosophila yakuba
Align length 102
Score (bit) 35.0
E-value 0.27
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK957872|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0029_I04, 5'
         (583 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P13728|SGS3_DROYA Salivary glue protein Sgs-3 OS=Drosophila y...    35   0.27 
sp|Q6NRV8|R111B_XENLA E3 ubiquitin-protein ligase arkadia-B OS=X...    35   0.36 
sp|Q90ZT7|R111A_XENLA E3 ubiquitin-protein ligase arkadia-A (Fra...    34   0.61 
sp|Q21006|NHR34_CAEEL Nuclear hormone receptor family member nhr...    32   2.3  
sp|P13418|POLG_CRPV Genome polyprotein (Fragment) OS=Cricket par...    31   5.2  
sp|O67658|MVIN_AQUAE Virulence factor mviN homolog OS=Aquifex ae...    30   8.7  
sp|Q9C0D6|FHDC1_HUMAN FH2 domain-containing protein 1 OS=Homo sa...    30   8.7  
sp|A6NNC1|P12LL_HUMAN Putative POM121-like protein 1-like OS=Hom...    30   8.8  
sp|Q6FB19|FDHD_ACIAD Protein fdhD homolog OS=Acinetobacter sp. (...    30   8.8  
sp|Q03320|ARACL_STRAT Putative araC-like transcription regulator...    30   8.8  

>sp|P13728|SGS3_DROYA Salivary glue protein Sgs-3 OS=Drosophila
           yakuba GN=Sgs3 PE=2 SV=2
          Length = 263

 Score = 35.0 bits (79), Expect = 0.27
 Identities = 31/102 (30%), Positives = 42/102 (41%), Gaps = 4/102 (3%)
 Frame = -3

Query: 347 PDSRSSATL*AQKTTR*KRPSHEASYALEHPQQPDTAALLHHH*SRLTSQR*RPTSSSGC 168
           P +RS+ T    K+T  KRP+HE +   + P Q  T        +  T    +PT+  GC
Sbjct: 159 PTTRSTTTRHTTKSTTSKRPTHETTTTSKRPTQETTTTTRRATQATTTP---KPTNKPGC 215

Query: 167 TSK----GIERLAQQPSR*GLQLLLNYTTRQAFCITRKSIHG 54
             K    G       P R GL   LN   RQ     R+ + G
Sbjct: 216 GCKSCGPGGIPCGSCPKRQGLCTELNNLLRQLERRVRECVCG 257


>sp|Q6NRV8|R111B_XENLA E3 ubiquitin-protein ligase arkadia-B
           OS=Xenopus laevis GN=rnf111-B PE=2 SV=1
          Length = 959

 Score = 34.7 bits (78), Expect = 0.36
 Identities = 33/112 (29%), Positives = 46/112 (41%), Gaps = 18/112 (16%)
 Frame = -1

Query: 574 PLPSPCSEH-----PENHHC*CIILPLRQHMN-SHCPGFKPLAATL*MLSRIH------- 434
           PLPS  S H     P +HH      PL QH++ SH      ++AT  +  R+H       
Sbjct: 659 PLPSLTSTHAVPPPPPSHHLSAAAAPLPQHLSTSHQSMSHHISATAPVTQRLHAHEVIQR 718

Query: 433 METKRQTQME-----RERGNRLLLYKHTHYCSQHQIADPQQRCRHKKLHGEK 293
           ME +R+  M+      ER        H +Y   H I  PQ    H +   E+
Sbjct: 719 MEVQRRRMMQHPTRAHERPPPHPHRMHPNYGHGHHIHVPQTMSSHPRQGPER 770


>sp|Q90ZT7|R111A_XENLA E3 ubiquitin-protein ligase arkadia-A
           (Fragment) OS=Xenopus laevis GN=rnf111-A PE=2 SV=1
          Length = 923

 Score = 33.9 bits (76), Expect = 0.61
 Identities = 33/112 (29%), Positives = 45/112 (40%), Gaps = 18/112 (16%)
 Frame = -1

Query: 574 PLPSPCSEH-----PENHHC*CIILPLRQHMN-SHCPGFKPLAATL*MLSRIH------- 434
           PLPS  S H     P +HH      PL QH++ SH      ++AT     R+H       
Sbjct: 623 PLPSLTSTHAVPPPPPSHHLSAAAAPLPQHLSTSHQSMSHHISATAPATQRLHAHEVIQR 682

Query: 433 METKRQTQME-----RERGNRLLLYKHTHYCSQHQIADPQQRCRHKKLHGEK 293
           ME +R+  M+      ER        H +Y   H I  PQ    H +   E+
Sbjct: 683 MEVQRRRMMQHPTRAHERPPPHPHRMHPNYGHGHHIHVPQTMSSHPRQGPER 734


>sp|Q21006|NHR34_CAEEL Nuclear hormone receptor family member nhr-34
           OS=Caenorhabditis elegans GN=nhr-34 PE=2 SV=3
          Length = 631

 Score = 32.0 bits (71), Expect = 2.3
 Identities = 16/54 (29%), Positives = 30/54 (55%)
 Frame = +2

Query: 113 AVAPSVMVVVQGVRFLLMCIPRMKSVVISVK*GEINDDAEGLRCPVVGDALAHR 274
           +VAP + +V + V F+    P+ + + + +  G +  +  GL+C V GD+ A R
Sbjct: 111 SVAPPLCIVPRSVEFIN---PKTEDMSMDIPMGNVQSEFTGLKCRVCGDSRAGR 161


>sp|P13418|POLG_CRPV Genome polyprotein (Fragment) OS=Cricket
           paralysis virus PE=1 SV=2
          Length = 895

 Score = 30.8 bits (68), Expect = 5.2
 Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 6/94 (6%)
 Frame = -1

Query: 487 CPGFKPLAATL*MLSRIHMETKRQTQMERERGNRLLLYKHTHYCSQ---HQIADPQQRCR 317
           CP + P A  L +     +E +R  +      NR+     T  CS+     + + QQ  R
Sbjct: 591 CPSYVPYAGDLTLADTRKIEAERTQEYSNNEDNRI-----TTQCSRIVAQVMGEDQQIPR 645

Query: 316 HKKLHGEKDPPMRHPMR*S---IPNNRTPQPFCI 224
           ++  HG       HP+      I NN +PQ  CI
Sbjct: 646 NEAQHGV------HPISIDTHRISNNWSPQAMCI 673


>sp|O67658|MVIN_AQUAE Virulence factor mviN homolog OS=Aquifex
           aeolicus GN=mviN PE=3 SV=1
          Length = 499

 Score = 30.0 bits (66), Expect = 8.7
 Identities = 21/58 (36%), Positives = 29/58 (50%)
 Frame = -3

Query: 512 ASPAHELPLSWFQAISSNTLDAITHSYGDKEADSDGERKRQPPPLIQAHTLLLAAPDS 339
           A+  + LP+S F    SNTL A+  +  DKE D+D   K          TL+L+ P S
Sbjct: 262 AARIYLLPISLFSISLSNTLLALVSTKKDKEKDTDTALKL---------TLMLSIPSS 310


>sp|Q9C0D6|FHDC1_HUMAN FH2 domain-containing protein 1 OS=Homo
           sapiens GN=FHDC1 PE=2 SV=2
          Length = 1143

 Score = 30.0 bits (66), Expect = 8.7
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -3

Query: 437 SYGDKEADSDGERKRQPPPLIQAHTLLLAAPDSRSSA 327
           S+  K   S G+ +   PP  QAH L  A P++ +SA
Sbjct: 597 SFAHKPQASGGQEEAPNPPSAQAHQLAAAQPENHASA 633


>sp|A6NNC1|P12LL_HUMAN Putative POM121-like protein 1-like OS=Homo
           sapiens PE=5 SV=3
          Length = 897

 Score = 30.0 bits (66), Expect = 8.8
 Identities = 16/50 (32%), Positives = 32/50 (64%)
 Frame = -1

Query: 157 ESNALHNNHHARGYSSSSTTRQDRPSASPARAFMEPCLQKWRPPSSSRCR 8
           +S+ +  NH ++   +SS+T+++  S+S +     P L++ R P+SSRC+
Sbjct: 57  QSSEIRYNHTSQTSWTSSSTKRNAISSSYSSTGGLPGLKQRRGPASSRCQ 106


>sp|Q6FB19|FDHD_ACIAD Protein fdhD homolog OS=Acinetobacter sp.
           (strain ADP1) GN=fdhD PE=3 SV=1
          Length = 273

 Score = 30.0 bits (66), Expect = 8.8
 Identities = 13/20 (65%), Positives = 16/20 (80%)
 Frame = -1

Query: 154 SNALHNNHHARGYSSSSTTR 95
           +NAL N+ HA+GY S STTR
Sbjct: 8   TNALSNDTHAQGYQSVSTTR 27


>sp|Q03320|ARACL_STRAT Putative araC-like transcription regulator
           OS=Streptomyces antibioticus PE=4 SV=1
          Length = 303

 Score = 30.0 bits (66), Expect = 8.8
 Identities = 16/62 (25%), Positives = 29/62 (46%)
 Frame = -2

Query: 234 PSASSLISPYFTEMTTDFILGMHIKRNRTPCTTTITLGATAPPQLHDKTGLLHHPQEHSW 55
           P AS+L++ +   +    +L +H++R   P   +  L   A P +      LH    HSW
Sbjct: 159 PMASTLVAEHLAVVMLIHVLRLHLER--APDAVSGWLAGLADPVVASALTFLHRDPAHSW 216

Query: 54  SL 49
           ++
Sbjct: 217 TV 218
tr_hit_id B6KDA0
Definition tr|B6KDA0|B6KDA0_TOXGO Putative uncharacterized protein OS=Toxoplasma gondii ME49
Align length 54
Score (bit) 37.4
E-value 0.61
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK957872|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0029_I04, 5'
         (583 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B6KDA0|B6KDA0_TOXGO Putative uncharacterized protein OS=Toxop...    37   0.61 
tr|Q6YVF9|Q6YVF9_ORYSJ Putative uncharacterized protein P0758B01...    36   1.4  
tr|A4HBI2|A4HBI2_LEIBR Putative uncharacterized protein OS=Leish...    36   1.4  
tr|Q1EP18|Q1EP18_MUSBA Protein kinase family protein OS=Musa bal...    35   3.0  
tr|B4PF55|B4PF55_DROYA Salivary gland secretion 3 OS=Drosophila ...    35   3.0  
tr|B8PBQ1|B8PBQ1_9APHY Predicted protein OS=Postia placenta Mad-...    35   3.0  
tr|Q4PCA3|Q4PCA3_USTMA Putative uncharacterized protein OS=Ustil...    35   3.1  
tr|Q4KTL7|Q4KTL7_9MONO Attachment glycoprotein (Fragment) OS=Hum...    34   6.8  
tr|Q4P6I0|Q4P6I0_USTMA Putative uncharacterized protein OS=Ustil...    34   6.8  
tr|A8ZSV7|A8ZSV7_DESOH Electron transport complex, RnfABCDGE typ...    34   6.9  
tr|Q69Y19|Q69Y19_ORYSJ Putative uncharacterized protein P0537F07...    34   6.9  

>tr|B6KDA0|B6KDA0_TOXGO Putative uncharacterized protein
           OS=Toxoplasma gondii ME49 GN=TGME49_071770 PE=4 SV=1
          Length = 1672

 Score = 37.4 bits (85), Expect = 0.61
 Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
 Frame = -3

Query: 581 SSPPSKSML*APRESPLLMHHSSASP--AHELPLSWFQAISSNTLDAITHSYGD 426
           S+P S S L AP  S L  HHSS+SP  A + P+S+      ++LDA   S+GD
Sbjct: 396 SAPASTSALSAPPSSSL-SHHSSSSPSAASKSPVSFVHRYEQSSLDASIDSWGD 448


>tr|Q6YVF9|Q6YVF9_ORYSJ Putative uncharacterized protein P0758B01.19
           OS=Oryza sativa subsp. japonica GN=P0758B01.19 PE=4 SV=1
          Length = 153

 Score = 36.2 bits (82), Expect = 1.4
 Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 11/49 (22%)
 Frame = -3

Query: 443 THSYGDKEADSDGE----------RKRQP-PPLIQAHTLLLAAPDSRSS 330
           TH YGD++ D DG+          R+R P PP +    LLLA P S SS
Sbjct: 17  THPYGDRDGDGDGDRAGFPPQVGRRRRMPSPPRVVGLLLLLALPTSSSS 65


>tr|A4HBI2|A4HBI2_LEIBR Putative uncharacterized protein
           OS=Leishmania braziliensis GN=LbrM20_V2.4220 PE=4 SV=1
          Length = 1189

 Score = 36.2 bits (82), Expect = 1.4
 Identities = 24/73 (32%), Positives = 40/73 (54%)
 Frame = -3

Query: 548 PRESPLLMHHSSASPAHELPLSWFQAISSNTLDAITHSYGDKEADSDGERKRQPPPLIQA 369
           P   PL+   SSA+P  E P++   A+S+ +  A T + G+ ++   GE+KR+P     A
Sbjct: 431 PTLPPLVKAESSAAPTAESPVANRGALSAESA-AATANTGESDSSPAGEKKRRPGTAAPA 489

Query: 368 HTLLLAAPDSRSS 330
            +L L+  +  SS
Sbjct: 490 ASLPLSPRNGDSS 502


>tr|Q1EP18|Q1EP18_MUSBA Protein kinase family protein OS=Musa
           balbisiana GN=MBP_91N22.78 PE=4 SV=1
          Length = 637

 Score = 35.0 bits (79), Expect = 3.0
 Identities = 31/120 (25%), Positives = 44/120 (36%), Gaps = 1/120 (0%)
 Frame = -3

Query: 575 PPSKSML*APRESPLLMHHSSASPAHELPLSWFQAISSNTLDAITHSYGDKEADSDGERK 396
           PPS      P  SP   H + A P            SSN     T   G K   S G+  
Sbjct: 166 PPSP-----PSPSPSASHRAPADPISP---------SSNGSGIPTSDVGQKSGQSSGDGG 211

Query: 395 RQPPPLIQAHTLLLAAPDSRSSATL*AQKTTR*KRPS-HEASYALEHPQQPDTAALLHHH 219
            +  P +    +          A     +  R K P+ +E+ +A+  P Q  +A L+HHH
Sbjct: 212 MKAGPAVAVALVTAVVLLGLVGAITWIVRRKRRKPPANYESGFAMSSPYQSPSAPLVHHH 271


>tr|B4PF55|B4PF55_DROYA Salivary gland secretion 3 OS=Drosophila
           yakuba GN=Sgs3 PE=4 SV=1
          Length = 273

 Score = 35.0 bits (79), Expect = 3.0
 Identities = 31/102 (30%), Positives = 42/102 (41%), Gaps = 4/102 (3%)
 Frame = -3

Query: 347 PDSRSSATL*AQKTTR*KRPSHEASYALEHPQQPDTAALLHHH*SRLTSQR*RPTSSSGC 168
           P +RS+ T    K+T  KRP+HE +   + P Q  T        +  T    +PT+  GC
Sbjct: 169 PTTRSTTTRQTTKSTTSKRPTHETTTTSKRPTQETTTTTRRATQATTTP---KPTNKPGC 225

Query: 167 TSK----GIERLAQQPSR*GLQLLLNYTTRQAFCITRKSIHG 54
             K    G       P R GL   LN   RQ     R+ + G
Sbjct: 226 GCKSCGPGGIPCGSCPKRQGLCTELNNLLRQLERRVRECVCG 267


>tr|B8PBQ1|B8PBQ1_9APHY Predicted protein OS=Postia placenta
           Mad-698-R GN=POSPLDRAFT_98870 PE=4 SV=1
          Length = 1615

 Score = 35.0 bits (79), Expect = 3.0
 Identities = 25/94 (26%), Positives = 42/94 (44%)
 Frame = -3

Query: 548 PRESPLLMHHSSASPAHELPLSWFQAISSNTLDAITHSYGDKEADSDGERKRQPPPLIQA 369
           PR   +L+ HS+ SP H LP++   A     LD+      D +AD +G R      L+ +
Sbjct: 274 PRVFQMLITHSNRSPVHALPVALGHACERRDLDS------DADADKEGVRTHARMLLVPS 327

Query: 368 HTLLLAAPDSRSSATL*AQKTTR*KRPSHEASYA 267
              ++A    + S  +   ++ R    +  AS A
Sbjct: 328 VVGIVAVARHKGSLLIGTVRSVRPANANASASVA 361


>tr|Q4PCA3|Q4PCA3_USTMA Putative uncharacterized protein OS=Ustilago
           maydis GN=UM02260.1 PE=4 SV=1
          Length = 1929

 Score = 35.0 bits (79), Expect = 3.1
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = -1

Query: 139 NNHHARGYSSSSTTRQDRPSASP-ARAFMEPCLQKWRPPSSSR 14
           NNHHAR + S+  TR  +PS++P  R F  P +    P   +R
Sbjct: 154 NNHHARTHPSNDGTRTPKPSSTPKGRPFASPIITAATPQQPNR 196


>tr|Q4KTL7|Q4KTL7_9MONO Attachment glycoprotein (Fragment) OS=Human
           metapneumovirus GN=G PE=4 SV=1
          Length = 212

 Score = 33.9 bits (76), Expect = 6.8
 Identities = 35/135 (25%), Positives = 60/135 (44%), Gaps = 3/135 (2%)
 Frame = -3

Query: 569 SKSML*APRESPLL-MHHSSASPAHELPLSWFQAISSNTLD--AITHSYGDKEADSDGER 399
           S S + + RE+P + M +S  +P  + P    Q+   +TL   A T S G +   +    
Sbjct: 57  SSSPMESSRETPTVPMDNSDTNPGSQHPTQ--QSTEGSTLHSAASTSSPGTEPTSTSDTT 114

Query: 398 KRQPPPLIQAHTLLLAAPDSRSSATL*AQKTTR*KRPSHEASYALEHPQQPDTAALLHHH 219
            R  PPL+  HT   +A  +R+S  +  +   R    +H + +A     +  T       
Sbjct: 115 SR--PPLVDTHTTPPSASRTRTSPAVHTKNNPRISPRTHSSPWATTRTVRGTTTL----- 167

Query: 218 *SRLTSQR*RPTSSS 174
             R +S R RP+++S
Sbjct: 168 --RTSSTRKRPSTAS 180


>tr|Q4P6I0|Q4P6I0_USTMA Putative uncharacterized protein OS=Ustilago
            maydis GN=UM04283.1 PE=4 SV=1
          Length = 1180

 Score = 33.9 bits (76), Expect = 6.8
 Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
 Frame = -3

Query: 467  SSNTLDAITHSYGDKEADSDGERKRQPPPLIQAHTLLLAAPDSRSSATL*AQKTTR*KRP 288
            S  TLD +     D E DS+ ++K Q    +Q    +LAA D+  S        +  + P
Sbjct: 1005 SRGTLDKVERVELDDEIDSEAQQKEQVERGVQEEQAMLAAEDAWDSKRAGQIARSDSQTP 1064

Query: 287  SHEASYAL----EHPQQPDTAALLHH 222
            S E S+ L     +  +P + AL+ H
Sbjct: 1065 SSEDSFFLGSGPSNTSRPGSGALMKH 1090


>tr|A8ZSV7|A8ZSV7_DESOH Electron transport complex, RnfABCDGE type,
           B subunit OS=Desulfococcus oleovorans (strain DSM 6200 /
           Hxd3) GN=Dole_0311 PE=4 SV=1
          Length = 303

 Score = 33.9 bits (76), Expect = 6.9
 Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 1/99 (1%)
 Frame = +1

Query: 235 AAVSGC-WGCSSA*DASWEGLFHRVVFCAYNVAEDLLSGAASNSVCACIRGGGCLFLSPS 411
           A V GC +GC    D         V  CAY+ A  +++G A     AC+  G C    P 
Sbjct: 133 ADVQGCTYGCLGFGDC--------VEACAYD-AIHVINGLAVVDYTACVGCGACAKACPR 183

Query: 412 ESASLSPYECVIASRVLLLMA*NQDSGSSCAGEAEE*CI 528
              +++P++   A RV  ++  N+D+G       +  C+
Sbjct: 184 NIITMTPFK---ADRVFAVLCSNKDAGKEVKKVCDVGCL 219