DK957895 |
Clone id |
TST39A01NGRL0029_J04 |
Library |
TST39 |
Length |
595 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0029_J04. 5' end sequence. |
Accession |
DK957895 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL3773Contig1 |
Sequence |
CACTGGACCTCTGGAGTTCAAACTAAATTCTTCTCTCTCTCTCGTTGTAGAATGGCAGGG CCATGGAGCGTAATGGATCCCCTGGCTGCCTCTTCCTCCTCCTCCTCAGAAAATTCCGAT GCGAAGTCTGATGTCGATGAGGACTCTGCTGCAGCTCCAAAGCAATTAGAGGAGAAGAAG AAAGGTGCCCTAGATTTTGAGGCCATACGCAAGCATGGATATTCAGGAGGCCCTTCTGTT CTTTATGTGCCTCCACCGAAGCCAGACACACTGCAAGAGGGCCAGGATTGGTCTTGGTCT TGCGGGAATGGGAAGGGTGACAATGCCGAAGAAAAAGAAGCCATAACTGAGCGCGATGGG ACACGGCACAATGCAAATGACGGGGCTGTTCAGGCTGCTGCCCAGGCCGTAGCAGAGTTC AACTATGCAAAAAAACAAAAACGTGAGAAAGCTGCGGAAGCCAGGGCTCTCTCATTTTCA CAGAAAGAGAAACGAAAACGCGACTTTGGTCAGGCCAGTAGAGGAAAAAACTACGTCGAA GAGGAGAAGAGAATTTTAAGGGATCAGGGTGTGTATTCAGGGGTTTGGCGTGTGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q7SZP2 |
Definition |
sp|Q7SZP2|CA052_DANRE UPF0690 protein C1orf52 homolog OS=Danio rerio |
Align length |
30 |
Score (bit) |
50.1 |
E-value |
9.0e-06 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LM59 |
Definition |
tr|B8LM59|B8LM59_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
139 |
Score (bit) |
140.0 |
E-value |
4.0e-32 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK957895|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0029_J04, 5' (595 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LM59|B8LM59_PICSI Putative uncharacterized protein OS=Picea... 140 4e-32 tr|A5B813|A5B813_VITVI Putative uncharacterized protein (Fragmen... 135 2e-30 tr|A7PUD8|A7PUD8_VITVI Chromosome chr7 scaffold_31, whole genome... 134 3e-30 tr|Q67IW6|Q67IW6_ORYSJ cDNA clone:002-121-F07, full insert seque... 124 3e-27 tr|B8B0F6|B8B0F6_ORYSI Putative uncharacterized protein OS=Oryza... 124 3e-27 tr|A9U166|A9U166_PHYPA Predicted protein (Fragment) OS=Physcomit... 124 4e-27 tr|A3BDR6|A3BDR6_ORYSJ Putative uncharacterized protein OS=Oryza... 120 8e-26 tr|B6T992|B6T992_MAIZE Putative uncharacterized protein OS=Zea m... 107 5e-22 tr|B6TSI8|B6TSI8_MAIZE Putative uncharacterized protein OS=Zea m... 106 9e-22 tr|Q2V3L4|Q2V3L4_ARATH Uncharacterized protein At4g04614.1 (At4g... 98 4e-19 tr|A8JIF3|A8JIF3_CHLRE Predicted protein (Fragment) OS=Chlamydom... 80 1e-13 tr|A9UTQ3|A9UTQ3_MONBE Predicted protein OS=Monosiga brevicollis... 56 2e-06 tr|B3RNX7|B3RNX7_TRIAD Putative uncharacterized protein OS=Trich... 50 8e-05 tr|B5XC77|B5XC77_SALSA C1orf52 homolog OS=Salmo salar GN=CA052 P... 49 2e-04 tr|B6N293|B6N293_BRAFL Putative uncharacterized protein OS=Branc... 47 6e-04 tr|B6L6T0|B6L6T0_BRAFL Putative uncharacterized protein OS=Branc... 47 6e-04 tr|Q0UF25|Q0UF25_PHANO Putative uncharacterized protein OS=Phaeo... 38 0.39 tr|A4CGL4|A4CGL4_9FLAO Putative RNA methyltransferase OS=Robigin... 34 5.6 tr|Q4VKB0|Q4VKB0_PRIPA POP-1 OS=Pristionchus pacificus GN=pop-1 ... 34 5.6
>tr|B8LM59|B8LM59_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 202
Score = 140 bits (354), Expect = 4e-32 Identities = 75/139 (53%), Positives = 87/139 (62%), Gaps = 2/139 (1%) Frame = +1
Query: 172 EKKKGALDFEAIRKHGYSGGPSVLYVPPPKPDTLQEGQDWSWSCGNGKGDNAE--EKEAI 345 E +K +D+EA+ +HGY GGPSVL VPPP+ E QDWSWS G KGDN E+E+ Sbjct: 62 EGRKSTIDYEALSRHGYYGGPSVLNVPPPRAKEPVE-QDWSWSGGKRKGDNENNHEEESY 120
Query: 346 TERDGTRHNANDGXXXXXXXXXXEFNYXXXXXXXXXXXXXXLSFSQKEKRKRDFGQASRG 525 ER+ TR +G E N+ LSFSQKEKRKRD GQASRG Sbjct: 121 EEREQTRRAVTEGAALSAAQGIAEHNFAKKQRTELANEQRRLSFSQKEKRKRDLGQASRG 180
Query: 526 KNYVEEEKRILRDQGVYSG 582 KNYVEEEKR+LRDQGVYSG Sbjct: 181 KNYVEEEKRLLRDQGVYSG 199
>tr|A5B813|A5B813_VITVI Putative uncharacterized protein (Fragment) OS=Vitis vinifera GN=VITISV_023851 PE=4 SV=1 Length = 168
Score = 135 bits (340), Expect = 2e-30 Identities = 73/141 (51%), Positives = 87/141 (61%) Frame = +1
Query: 160 KQLEEKKKGALDFEAIRKHGYSGGPSVLYVPPPKPDTLQEGQDWSWSCGNGKGDNAEEKE 339 K+ ++K GA+DFEA+++HGY GG SVL VPPPK D E +DWSWS G + E +E Sbjct: 42 KKSGKQKNGAIDFEALKRHGYKGGLSVLSVPPPKED---EKRDWSWSTGKDRATTKEVEE 98
Query: 340 AITERDGTRHNANDGXXXXXXXXXXEFNYXXXXXXXXXXXXXXLSFSQKEKRKRDFGQAS 519 + ER TR+ DG E LSFSQKEKRKRDFGQAS Sbjct: 99 SYDERQKTRYAIADGEQLMNVQSRNE--------------KKNLSFSQKEKRKRDFGQAS 144
Query: 520 RGKNYVEEEKRILRDQGVYSG 582 RGKNYVEEEKR+LRD G+YSG Sbjct: 145 RGKNYVEEEKRLLRDSGIYSG 165
>tr|A7PUD8|A7PUD8_VITVI Chromosome chr7 scaffold_31, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00023762001 PE=4 SV=1 Length = 136
Score = 134 bits (338), Expect = 3e-30 Identities = 72/137 (52%), Positives = 85/137 (62%) Frame = +1
Query: 172 EKKKGALDFEAIRKHGYSGGPSVLYVPPPKPDTLQEGQDWSWSCGNGKGDNAEEKEAITE 351 ++K GA+DFEA+++HGY GG SVL VPPPK D E +DWSWS G + E +E+ E Sbjct: 14 KQKNGAIDFEALKRHGYKGGLSVLSVPPPKED---EKRDWSWSTGKDRATTKEVEESYDE 70
Query: 352 RDGTRHNANDGXXXXXXXXXXEFNYXXXXXXXXXXXXXXLSFSQKEKRKRDFGQASRGKN 531 R TR+ DG E LSFSQKEKRKRDFGQASRGKN Sbjct: 71 RQKTRYAIADGEQLMNVQSRNE--------------KKNLSFSQKEKRKRDFGQASRGKN 116
Query: 532 YVEEEKRILRDQGVYSG 582 YVEEEKR+LRD G+YSG Sbjct: 117 YVEEEKRLLRDSGIYSG 133
>tr|Q67IW6|Q67IW6_ORYSJ cDNA clone:002-121-F07, full insert sequence OS=Oryza sativa subsp. japonica GN=OSJNBa0048L03.18-1 PE=2 SV=1 Length = 179
Score = 124 bits (312), Expect = 3e-27 Identities = 70/146 (47%), Positives = 84/146 (57%), Gaps = 1/146 (0%) Frame = +1
Query: 148 AAAPKQLEEKKK-GALDFEAIRKHGYSGGPSVLYVPPPKPDTLQEGQDWSWSCGNGKGDN 324 AAAP + +KKK G +DF A+ +HGY GGPSVL VPPPK + +WSWS G + D Sbjct: 44 AAAPDAMSKKKKPGGVDFNALSRHGYRGGPSVLTVPPPKVEP-----NWSWSTGKDRNDK 98
Query: 325 AEEKEAITERDGTRHNANDGXXXXXXXXXXEFNYXXXXXXXXXXXXXXLSFSQKEKRKRD 504 ++ E+ ER+ TR +G SFSQKEKRKRD Sbjct: 99 EDQTESYEERERTRTAVTEGEKL--------IGVRNPQPRQMEKENKDASFSQKEKRKRD 150
Query: 505 FGQASRGKNYVEEEKRILRDQGVYSG 582 GQASRGKNYVEEEKR+LR GVYSG Sbjct: 151 RGQASRGKNYVEEEKRLLRGSGVYSG 176
>tr|B8B0F6|B8B0F6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_23789 PE=4 SV=1 Length = 179
Score = 124 bits (312), Expect = 3e-27 Identities = 70/146 (47%), Positives = 84/146 (57%), Gaps = 1/146 (0%) Frame = +1
Query: 148 AAAPKQLEEKKK-GALDFEAIRKHGYSGGPSVLYVPPPKPDTLQEGQDWSWSCGNGKGDN 324 AAAP + +KKK G +DF A+ +HGY GGPSVL VPPPK + +WSWS G + D Sbjct: 44 AAAPDAMSKKKKPGGVDFNALSRHGYRGGPSVLTVPPPKVEP-----NWSWSTGKDRNDK 98
Query: 325 AEEKEAITERDGTRHNANDGXXXXXXXXXXEFNYXXXXXXXXXXXXXXLSFSQKEKRKRD 504 ++ E+ ER+ TR +G SFSQKEKRKRD Sbjct: 99 EDQTESYEERERTRAAVTEGEKL--------IGVRNPQPRQMEKENKDASFSQKEKRKRD 150
Query: 505 FGQASRGKNYVEEEKRILRDQGVYSG 582 GQASRGKNYVEEEKR+LR GVYSG Sbjct: 151 RGQASRGKNYVEEEKRLLRGSGVYSG 176
>tr|A9U166|A9U166_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_37217 PE=4 SV=1 Length = 171
Score = 124 bits (311), Expect = 4e-27 Identities = 65/138 (47%), Positives = 85/138 (61%), Gaps = 1/138 (0%) Frame = +1
Query: 172 EKKKGALDFEAIRKHGYSGGPSVLYVPPPKPDTLQEGQDWSWSCGNGKGD-NAEEKEAIT 348 +KK G LD+EA+ +HGY+GG S++ VP P D QDWSWS G KG +AEE+E+I Sbjct: 33 KKKAGRLDYEALSRHGYTGGLSIMNVPAPTQDA--GDQDWSWSSGKRKGTGDAEEQESIE 90
Query: 349 ERDGTRHNANDGXXXXXXXXXXEFNYXXXXXXXXXXXXXXLSFSQKEKRKRDFGQASRGK 528 R+ R ++ +N+ ++F+QKEKRKR+ GQASRGK Sbjct: 91 LRERIRETISEDAEAAAARAVAAYNFTKKQKRDAIAEQKAVTFAQKEKRKREMGQASRGK 150
Query: 529 NYVEEEKRILRDQGVYSG 582 NYVEEEKR+LRD GVYSG Sbjct: 151 NYVEEEKRLLRDSGVYSG 168
>tr|A3BDR6|A3BDR6_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_021188 PE=4 SV=1 Length = 130
Score = 120 bits (300), Expect = 8e-26 Identities = 65/138 (47%), Positives = 79/138 (57%) Frame = +1
Query: 169 EEKKKGALDFEAIRKHGYSGGPSVLYVPPPKPDTLQEGQDWSWSCGNGKGDNAEEKEAIT 348 ++KK G +DF A+ +HGY GGPSVL VPPPK + +WSWS G + D ++ E+ Sbjct: 3 KKKKPGGVDFNALSRHGYRGGPSVLTVPPPKVEP-----NWSWSTGKDRNDKEDQTESYE 57
Query: 349 ERDGTRHNANDGXXXXXXXXXXEFNYXXXXXXXXXXXXXXLSFSQKEKRKRDFGQASRGK 528 ER+ TR +G SFSQKEKRKRD GQASRGK Sbjct: 58 ERERTRTAVTEGEKL--------IGVRNPQPRQMEKENKDASFSQKEKRKRDRGQASRGK 109
Query: 529 NYVEEEKRILRDQGVYSG 582 NYVEEEKR+LR GVYSG Sbjct: 110 NYVEEEKRLLRGSGVYSG 127
>tr|B6T992|B6T992_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 227
Score = 107 bits (267), Expect = 5e-22 Identities = 63/146 (43%), Positives = 77/146 (52%) Frame = +1
Query: 145 SAAAPKQLEEKKKGALDFEAIRKHGYSGGPSVLYVPPPKPDTLQEGQDWSWSCGNGKGDN 324 +A+ + +KKK +DF A+ +HGY GGPSVL V P E +WSWS G + Sbjct: 88 AASTAEARSKKKKTGVDFSALSRHGYHGGPSVLTVRPAA-----EEPNWSWSTGKDRDGR 142
Query: 325 AEEKEAITERDGTRHNANDGXXXXXXXXXXEFNYXXXXXXXXXXXXXXLSFSQKEKRKRD 504 + E+ ER+ TR +G SFSQKEKRKRD Sbjct: 143 EDAPESYEERERTRAAVTEGEKFIGLQNAPP----NQLLLEKDRKEKDASFSQKEKRKRD 198
Query: 505 FGQASRGKNYVEEEKRILRDQGVYSG 582 GQASRGKNYVEEEKR+LR GVYSG Sbjct: 199 RGQASRGKNYVEEEKRLLRGSGVYSG 224
>tr|B6TSI8|B6TSI8_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 227
Score = 106 bits (265), Expect = 9e-22 Identities = 63/146 (43%), Positives = 76/146 (52%) Frame = +1
Query: 145 SAAAPKQLEEKKKGALDFEAIRKHGYSGGPSVLYVPPPKPDTLQEGQDWSWSCGNGKGDN 324 ++ A +KKK +DF A+ +HGY GGPSVL V P E +WSWS G + Sbjct: 88 ASTAEAARSKKKKTGVDFSALSRHGYHGGPSVLTVRPAA-----EEPNWSWSTGKDRDGR 142
Query: 325 AEEKEAITERDGTRHNANDGXXXXXXXXXXEFNYXXXXXXXXXXXXXXLSFSQKEKRKRD 504 + E+ ER+ TR +G SFSQKEKRKRD Sbjct: 143 EDAPESYEERERTRAAVTEGEKFIGLQNAPP----NQLLLEKDRKEKDASFSQKEKRKRD 198
Query: 505 FGQASRGKNYVEEEKRILRDQGVYSG 582 GQASRGKNYVEEEKR+LR GVYSG Sbjct: 199 RGQASRGKNYVEEEKRLLRGSGVYSG 224
>tr|Q2V3L4|Q2V3L4_ARATH Uncharacterized protein At4g04614.1 (At4g04614) (Putative uncharacterized protein) OS=Arabidopsis thaliana GN=At4g04614 PE=2 SV=1 Length = 176
Score = 97.8 bits (242), Expect = 4e-19 Identities = 60/137 (43%), Positives = 73/137 (53%) Frame = +1
Query: 172 EKKKGALDFEAIRKHGYSGGPSVLYVPPPKPDTLQEGQDWSWSCGNGKGDNAEEKEAITE 351 +K K A D+E++++HGY + +P P E QDWSW+ G K E KE+ E Sbjct: 56 KKDKKAFDYESLQQHGYKA-VGLSDIPAP-----MEKQDWSWTTGKDKQRVEEVKESYQE 109
Query: 352 RDGTRHNANDGXXXXXXXXXXEFNYXXXXXXXXXXXXXXLSFSQKEKRKRDFGQASRGKN 531 R+ TR A G LSFSQKEK+KRD GQASRGKN Sbjct: 110 REATRAAAVTGGETIANAQLRN-------------DRKNLSFSQKEKKKRDLGQASRGKN 156
Query: 532 YVEEEKRILRDQGVYSG 582 YVEEEKR LR+ GVYSG Sbjct: 157 YVEEEKRQLRESGVYSG 173
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