DK957897 [AcEST]

DK957897
Clone id	TST39A01NGRL0029_J07
Library	TST39
Length	622
Definition	Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0029_J07. 5' end sequence.
Accession	DK957897
Tissue type	prothallia with plantlets
Developmental stage	gametophytes with sporophytes
Contig ID	CL1884Contig1
Sequence	GTAGTCCTGTGTCAAAGAGGGGGGGTGTATGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA GTGAGTGTGTGTGTGTGTGTGTTTTTCTCTACACATTTTCCTCAACTCCCCTCGTTCGGC TTTAAAGAGTGAGAGTGTGTGTGTGCGTTTTCAAATTGGTGCATATTGAATTGCCACCCA CTACTGCAACAACATCAGCTTACCCACTTCTCTGATTCTATAAACTAAAGCGATCCATTC CGTTTAGCCACACTTCTCTCTTCGCTCCTTCAGCTGAACCCAAGCTGCAGTGGAGCTCTT TGACCCTTGCGTGCGTGTGGGCGTGTTTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGA GGGAGAGAGACTGTGACTTTCTAGCTCAACACTCGCAATGTGCATTGTGCTTTGCTCACA CACACAGACCCCTCTCTAGTTCAACAATACAATTCCGCACACATTGCGCTTTGCACATAC ACACAGACATGGCAGCCACGTTGCTCTTTCTCTTTGTGTTCCTCTCACTCTATGGCTCAG CCTCATGCAGGCTACTGCAAACCCCTCTCCTCGACCATGCAACAACCGACCCGATCGATG CTACACATCTTCCAACTTCCGT
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK957897\|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0029_J07, 5' (622 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done *** No hits found ****
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	Q5RH75
Definition	tr\|Q5RH75\|Q5RH75_DANRE Novel protein similar to rho-associated, coiled-coil containing protein kinase 2 (Rock2) (Fragment) OS=Danio rerio
Align length	87
Score (bit)	33.9
E-value	7.9
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK957897\|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0029_J07, 5' (622 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|Q5RH75\|Q5RH75_DANRE Novel protein similar to rho-associated, ... 34 7.9 >tr\|Q5RH75\|Q5RH75_DANRE Novel protein similar to rho-associated, coiled-coil containing protein kinase 2 (Rock2) (Fragment) OS=Danio rerio GN=rock2b PE=4 SV=1 Length = 245 Score = 33.9 bits (76), Expect = 7.9 Identities = 32/87 (36%), Positives = 34/87 (39%), Gaps = 14/87 (16%) Frame = +3 Query: 396 QCALCFAHTHRPLSSSTIQFRTHCALHIHTDMAATLLF----LFVFLSLYGSASCRLLQT 563 QC LC HT LS S + TH HIHT TL F F FLSL+ S S Sbjct: 5 QCLLCVLHT---LSLSLLGKHTHTHSHIHTH---TLQFFYNIFFFFLSLFLSLSAMAPVV 58 Query: 564 PLL----------DHATTDPIDATHLP 614 P L D DPI P Sbjct: 59 PELSSDIDTSNFDDDIKDDPIGTETFP 85