DK957917 [AcEST]

DK957917
Clone id	TST39A01NGRL0029_K03
Library	TST39
Length	637
Definition	Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0029_K03. 5' end sequence.
Accession	DK957917
Tissue type	prothallia with plantlets
Developmental stage	gametophytes with sporophytes
Contig ID	CL1558Contig1
Sequence	GCTTTGGGCAGCTTGCTTTTTTTGAATAAAAAGCAGCCCATTTCTGTGTACTGCTCAATT AACAAAACCAGAGTTCTTTTAAGCAAGTGTTTAATACGCAGCCTTTACCTGCTCCTAAGG GGCTTTGGGACCCCTAACCTTATGGTATCAAGCGTTGAATGAAATGGACATCAATGCTGA CCCTCACACAGAGGCATCGGAACCCATCACTCTGCCTTGATGCTCGACATCCTCTAGTTT GCAGTCCAATATATGTCAGTCCTCCAGGCTTGCTGTTTCTTTTCCTGAGCATTGAGAATT TTGCACCTACAGTTGCCTCACCTCCTGACCGGTGTCCGCAATGATCTGAGGATCACATTG CAATGCAGCTACATGTCATGTTGCTGGGCTCATGTGCCTAACATGGCAGCCCCACTCACT GGGTCGAGTCCCTCGACTGGCAGAGTAAAGGTGCACTGCCTCTCAACAGGCGAGCGCCAA TGTGCCAAGAGAACTGCGATCGCCTCTGCTGAGTCTCCGCGTCTGTTAAGGAGTGACTGG AGTTTGATCTTGGAGAAACCTCAAGAGTCAGCATTCAATTCCATTAGTAATCGAGAACTA AGAAGCTACAGGTGGGATGAGCTTTACGCTCGGAAGT
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	Q39565
Definition	sp\|Q39565\|DYHB_CHLRE Dynein beta chain, flagellar outer arm OS=Chlamydomonas reinhardtii
Align length	58
Score (bit)	32.0
E-value	2.7
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK957917\|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0029_K03, 5' (637 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|Q39565\|DYHB_CHLRE Dynein beta chain, flagellar outer arm OS=C... 32 2.7 >sp\|Q39565\|DYHB_CHLRE Dynein beta chain, flagellar outer arm OS=Chlamydomonas reinhardtii GN=ODA4 PE=3 SV=1 Length = 4568 Score = 32.0 bits (71), Expect = 2.7 Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 5/58 (8%) Frame = +3 Query: 174 MLTLTQRHRNP-----SLCLDARHPLVCSPIYVSPPGLLFLFLSIENFAPTVASPPDR 332 MLTL R P L L+ H + CSP VS G++F+ + P VAS D+ Sbjct: 2298 MLTLASNERIPLTPSMRLLLEINHMVHCSPATVSRGGVIFINADDVGWQPVVASWIDK 2355
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK957917\|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0029_K03, 5' (637 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done *** No hits found ****