BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK957945|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0029_L07, 5'
         (535 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6P402|CC123_DANRE Coiled-coil domain-containing protein 123,...    32   2.5  
sp|Q49Y00|END4_STAS1 Probable endonuclease 4 OS=Staphylococcus s...    30   9.5  

>sp|Q6P402|CC123_DANRE Coiled-coil domain-containing protein 123,
           mitochondrial OS=Danio rerio GN=ccdc123 PE=2 SV=1
          Length = 695

 Score = 31.6 bits (70), Expect = 2.5
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +3

Query: 36  RPLPKIRNTTTTGVDEDSPAPPGKLNLKQIRQVFLSYQ 149
           RPL K  N    G+    PAPP  L++K +  + L+Y+
Sbjct: 371 RPLTKDENAQLKGLPVKGPAPPWLLDMKYLSPLLLAYE 408


>sp|Q49Y00|END4_STAS1 Probable endonuclease 4 OS=Staphylococcus
           saprophyticus subsp. saprophyticus (strain ATCC 15305 /
           DSM 20229) GN=nfo PE=3 SV=1
          Length = 296

 Score = 29.6 bits (65), Expect = 9.5
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +3

Query: 21  HTYTRRPLPKIRNTTTTGVDEDSPAPPGKLNLKQIRQ 131
           H  T + +PKI  T   G D+ +  PP KL ++ ++Q
Sbjct: 246 HHDTFKDIPKILETPYVGEDKKNKKPPYKLEIEMLKQ 282

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK957945|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0029_L07, 5'
         (535 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9LIF6|Q9LIF6_ARATH Genomic DNA, chromosome 3, P1 clone:MHC9 ...    50   6e-05
tr|A7NW35|A7NW35_VITVI Chromosome chr5 scaffold_2, whole genome ...    48   4e-04
tr|A5BK09|A5BK09_VITVI Putative uncharacterized protein OS=Vitis...    48   4e-04
tr|A9PAM5|A9PAM5_POPTR Putative uncharacterized protein OS=Popul...    45   0.002
tr|A9T655|A9T655_PHYPA Predicted protein OS=Physcomitrella paten...    41   0.044
tr|B6TWA8|B6TWA8_MAIZE Putative uncharacterized protein OS=Zea m...    34   4.1  
tr|Q55661|Q55661_SYNY3 Sll0021 protein OS=Synechocystis sp. (str...    33   9.3  

>tr|Q9LIF6|Q9LIF6_ARATH Genomic DNA, chromosome 3, P1 clone:MHC9
           (Putative uncharacterized protein At3g21400) (Putative
           uncharacterized protein At3g21400/MHC9_8) OS=Arabidopsis
           thaliana GN=At3g21400/MHC9_8 PE=2 SV=1
          Length = 188

 Score = 50.4 bits (119), Expect = 6e-05
 Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
 Frame = +3

Query: 30  TRRPLPKIRNTTTTGVD-EDSPAPPGKLNLKQIRQVFLSYQGLIKGEK-PMSAEALARKY 203
           ++RPLPK+RNTT      E++P P G LN+ Q+R + L +QG  +    PM    +A KY
Sbjct: 100 SKRPLPKLRNTTPESTRYEENPVPQGTLNVAQVRHIMLLFQGKSQDHHGPMGVNEIAEKY 159

Query: 204 NXXXXXXXXXXXXHAIPDWKGDGQK 278
                         ++P    D QK
Sbjct: 160 RIDVSQVQKITQFLSLPQEITDKQK 184


>tr|A7NW35|A7NW35_VITVI Chromosome chr5 scaffold_2, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00019766001
           PE=4 SV=1
          Length = 192

 Score = 47.8 bits (112), Expect = 4e-04
 Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
 Frame = +3

Query: 36  RPLPKIRNTTT-TGVDEDSPAPPGKLNLKQIRQVFLSYQGLIKG-EKPMSAEALARKYNX 209
           RP+PK+RNT   +G  E+ PAP G LN  Q+R + L +QG     + PM+ + +A K+  
Sbjct: 106 RPMPKLRNTKPESGRYEEKPAPSGTLNAAQLRHILLLHQGKADDHDGPMNVKQIAEKFRI 165

Query: 210 XXXXXXXXXXXHAIPDWKGDGQKDN 284
                       ++P      QK+N
Sbjct: 166 DATMVKSILQFLSLPPEDSTKQKNN 190


>tr|A5BK09|A5BK09_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_043427 PE=4 SV=1
          Length = 220

 Score = 47.8 bits (112), Expect = 4e-04
 Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
 Frame = +3

Query: 36  RPLPKIRNTTT-TGVDEDSPAPPGKLNLKQIRQVFLSYQGLIKG-EKPMSAEALARKYNX 209
           RP+PK+RNT   +G  E+ PAP G LN  Q+R + L +QG     + PM+ + +A K+  
Sbjct: 134 RPMPKLRNTKPESGRYEEKPAPSGTLNAAQLRHILLLHQGKADDHDGPMNVKQIAEKFRI 193

Query: 210 XXXXXXXXXXXHAIPDWKGDGQKDN 284
                       ++P      QK+N
Sbjct: 194 DATMVQSILQFLSLPPEDSTKQKNN 218


>tr|A9PAM5|A9PAM5_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 187

 Score = 45.4 bits (106), Expect = 0.002
 Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
 Frame = +3

Query: 36  RPLPKIRNTTT-TGVDEDSPAPPGKLNLKQIRQVFLSYQGLIKG-EKPMSAEALARKY 203
           RP+PK+RNT   +G  E+    PG LN+ Q+R + L YQG     E PM+ + +A K+
Sbjct: 102 RPMPKLRNTKPDSGRYEERAVAPGTLNVAQLRHIILMYQGKADDHEGPMNIQQIAEKF 159


>tr|A9T655|A9T655_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_140834 PE=4 SV=1
          Length = 134

 Score = 40.8 bits (94), Expect = 0.044
 Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 6/64 (9%)
 Frame = +3

Query: 33  RRPLPKIRNTTT-TGVDEDSPAPPGKLNLKQIRQVFLSYQGL-IKG----EKPMSAEALA 194
           RRP P  R T+  TG DE+     G LN+  I++    +QG+  +G    EKPM  ++LA
Sbjct: 45  RRPRPSNRRTSAATGPDEEKVVAAGTLNIAGIQEALRLFQGIRAEGEKVQEKPMDVKSLA 104

Query: 195 RKYN 206
            K+N
Sbjct: 105 EKFN 108


>tr|B6TWA8|B6TWA8_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=4 SV=1
          Length = 115

 Score = 34.3 bits (77), Expect = 4.1
 Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
 Frame = +3

Query: 36  RPLPKIRNTTTT-GVDEDSPAPPGKLNLKQIRQVFLSYQGLIKGEK-PMSAEALARKYNX 209
           RPLPK+R +    G       P G LN++ I+++   YQG     + PMS + +A ++  
Sbjct: 30  RPLPKVRTSKAEPGQGGGRQLPSGALNVQHIQEIIRLYQGKSTNHQGPMSLDDIASRFGV 89

Query: 210 XXXXXXXXXXXHAIPDWKGDGQKD 281
                       ++P  +G  +K+
Sbjct: 90  EASAVQNIVRFVSLPQDEGVEKKE 113


>tr|Q55661|Q55661_SYNY3 Sll0021 protein OS=Synechocystis sp. (strain
           PCC 6803) GN=sll0021 PE=4 SV=1
          Length = 416

 Score = 33.1 bits (74), Expect = 9.3
 Identities = 17/45 (37%), Positives = 24/45 (53%)
 Frame = -2

Query: 447 IWLQTTKSKKDYILCPQSSAHFSIHKFDVTVASERILEMLTRALK 313
           IWL+ +K K D+  CP  +  F   K DVT A++   E+L    K
Sbjct: 267 IWLEISKGKVDWQFCPLPARPFKTIKVDVTEATDPQGELLMAIAK 311