DK957968 |
Clone id |
TST39A01NGRL0029_M09 |
Library |
TST39 |
Length |
655 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0029_M09. 5' end sequence. |
Accession |
DK957968 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL2806Contig1 |
Sequence |
TTCACGTGAAGAGTTCGGGAAGAATTTATGCTTGTGCATTTTGTGTATAGCTACGAGGTC GCCTGCTGAAAGGGGTGCTGGGGCTGCGCGTATCGGTCTTCCAGGTCTTTTGATCAGCAA TGGCATGCTTGCGAAGTGGTGCTGTTGGTACAGATAGGTGGGGAGCGCAACAGGATGACG TTTTGCGAAAGTTTTCGCCTTCGCTCAAGGGACAGTCCGTTCTGCTCAAAAGCCATTACG AAAACAAATTTCCTTACCTTGGCACTAAGAATGGGCAGATTCATCCAAATACCTTGAGGG TGCAATCCGTAATGCTGGAGAAGGAAACAAAGGTCACACAAAAGACTCTTTTGCATGAGT TGTATGAGGATCAAAAGCAAAGTCCTTGGTACGACAATTTGAGACGACCTGTTACTGATT TGAAGCCCTTGATTGAGAAAGGAATTCGAGGTGTTACCAGCAATCCAACGATCTTTCAGA AGGCCATTTCTTCCTCAAATGCATATGATGATCAATTCAGGCAGTTGATTCAAGAAGGCA AAGGGGTGGAAGAAGCTTATTGGGGCTTAGTTGTTAAGGACATACAGGATGCATGCAAGC TTTTCCATGACATACATAAAGAGAGCAATGGTGAGGATGGTCATGTGTCAGTCGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q118F4 |
Definition |
sp|Q118F4|TAL_TRIEI Transaldolase OS=Trichodesmium erythraeum (strain IMS101) |
Align length |
100 |
Score (bit) |
86.7 |
E-value |
1.0e-16 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK957968|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0029_M09, 5' (655 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q118F4|TAL_TRIEI Transaldolase OS=Trichodesmium erythraeum (s... 87 1e-16 sp|Q3SL03|TAL_THIDA Transaldolase OS=Thiobacillus denitrificans ... 77 1e-13 sp|Q2JCG8|TAL_FRASC Transaldolase OS=Frankia sp. (strain CcI3) G... 75 2e-13 sp|P48983|TAL2_NOSP7 Transaldolase 2 OS=Nostoc punctiforme (stra... 73 1e-12 sp|Q6AF36|TAL_LEIXX Transaldolase OS=Leifsonia xyli subsp. xyli ... 72 3e-12 sp|P48993|TAL2_ANASP Transaldolase 2 OS=Anabaena sp. (strain PCC... 71 4e-12 sp|Q0RH18|TAL_FRAAA Transaldolase OS=Frankia alni (strain ACN14a... 69 3e-11 sp|A9WT40|TAL_RENSM Transaldolase OS=Renibacterium salmoninarum ... 67 6e-11 sp|Q9XAC0|TAL2_STRCO Transaldolase 2 OS=Streptomyces coelicolor ... 67 1e-10 sp|A1KVT3|TAL_NEIMF Transaldolase OS=Neisseria meningitidis sero... 64 9e-10 sp|Q9K139|TAL_NEIMB Transaldolase OS=Neisseria meningitidis sero... 64 9e-10 sp|A0JWQ6|TAL_ARTS2 Transaldolase OS=Arthrobacter sp. (strain FB... 64 9e-10 sp|O88018|TAL1_STRCO Transaldolase 1 OS=Streptomyces coelicolor ... 64 9e-10 sp|A9M2N9|TAL_NEIM0 Transaldolase OS=Neisseria meningitidis sero... 63 2e-09 sp|Q47ND3|TAL_THEFY Transaldolase OS=Thermobifida fusca (strain ... 62 3e-09 sp|Q829U5|TAL2_STRAW Transaldolase 2 OS=Streptomyces avermitilis... 62 3e-09 sp|Q9JSU1|TAL_NEIMA Transaldolase OS=Neisseria meningitidis sero... 62 3e-09 sp|Q5F6E9|TAL_NEIG1 Transaldolase OS=Neisseria gonorrhoeae (stra... 62 3e-09 sp|O06812|TAL_MYCTU Transaldolase OS=Mycobacterium tuberculosis ... 62 3e-09 sp|A5U2F1|TAL_MYCTA Transaldolase OS=Mycobacterium tuberculosis ... 62 3e-09 sp|P55193|TAL_MYCLE Transaldolase OS=Mycobacterium leprae GN=tal... 62 3e-09 sp|A1KIN7|TAL_MYCBP Transaldolase OS=Mycobacterium bovis (strain... 62 3e-09 sp|P59955|TAL_MYCBO Transaldolase OS=Mycobacterium bovis GN=tal ... 62 3e-09 sp|A0LTY8|TAL_ACIC1 Transaldolase OS=Acidothermus cellulolyticus... 61 4e-09 sp|A0PPP5|TAL_MYCUA Transaldolase OS=Mycobacterium ulcerans (str... 61 6e-09 sp|Q82M93|TAL1_STRAW Transaldolase 1 OS=Streptomyces avermitilis... 61 6e-09 sp|Q9ZJC5|TAL_HELPJ Transaldolase OS=Helicobacter pylori J99 GN=... 49 2e-05 sp|Q1CRD7|TAL_HELPH Transaldolase OS=Helicobacter pylori (strain... 49 2e-05 sp|P56108|TAL_HELPY Transaldolase OS=Helicobacter pylori GN=tal ... 49 2e-05 sp|A1VY04|TAL_CAMJJ Transaldolase OS=Campylobacter jejuni subsp.... 49 3e-05
>sp|Q118F4|TAL_TRIEI Transaldolase OS=Trichodesmium erythraeum (strain IMS101) GN=tal PE=3 SV=1 Length = 380
Score = 86.7 bits (213), Expect = 1e-16 Identities = 46/100 (46%), Positives = 65/100 (65%), Gaps = 4/100 (4%) Frame = +3
Query: 366 EDQKQSPWYDNLRRPVTD---LKPLI-EKGIRGVTSNPTIFQKAISSSNAYDDQFRQLIQ 533 E+ QS W DNL R + + LK +I +KGIRG+TSNP IF+KAI+ + YD I+ Sbjct: 10 ENLGQSIWMDNLSRNIIESGELKSMIGKKGIRGITSNPAIFEKAIAGNAIYDADIEAGIK 69
Query: 534 EGKGVEEAYWGLVVKDIQDACKLFHDIHKESNGEDGHVSV 653 K V E Y LV KDI+DAC +F +++E+ G DG++S+ Sbjct: 70 ASKSVIEIYESLVFKDIRDACDIFMPVYEETKGLDGYISI 109
>sp|Q3SL03|TAL_THIDA Transaldolase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=tal PE=3 SV=1 Length = 359
Score = 76.6 bits (187), Expect = 1e-13 Identities = 42/96 (43%), Positives = 57/96 (59%), Gaps = 4/96 (4%) Frame = +3
Query: 378 QSPWYDNLRRPVTD----LKPLIEKGIRGVTSNPTIFQKAISSSNAYDDQFRQLIQEGKG 545 QS W DNL R + K + E G+ GVTSNP+IFQ A+++S Y D +L +E Sbjct: 12 QSLWLDNLSRDLLRDGALAKMIAEDGVSGVTSNPSIFQNALATSPHYADDLARLRREEAD 71
Query: 546 VEEAYWGLVVKDIQDACKLFHDIHKESNGEDGHVSV 653 VE Y LV+ DI+DAC L + + S G DG+VS+ Sbjct: 72 VERRYEALVIPDIRDACDLLLPLFERSAGNDGYVSL 107
>sp|Q2JCG8|TAL_FRASC Transaldolase OS=Frankia sp. (strain CcI3) GN=tal PE=3 SV=1 Length = 371
Score = 75.5 bits (184), Expect = 2e-13 Identities = 41/93 (44%), Positives = 56/93 (60%), Gaps = 4/93 (4%) Frame = +3
Query: 387 WYDNLRRP---VTDLKPLIE-KGIRGVTSNPTIFQKAISSSNAYDDQFRQLIQEGKGVEE 554 W D++ R +L L+E +G+ GVTSNPTIFQKAISSS+ YD+Q L G V E Sbjct: 16 WLDDISRDRLRTGNLAHLVENRGVVGVTSNPTIFQKAISSSDLYDEQLHDLAIRGVDVGE 75
Query: 555 AYWGLVVKDIQDACKLFHDIHKESNGEDGHVSV 653 A + D++DAC + ++ S G DG VS+ Sbjct: 76 AVRAITAADVRDACDVLRGVYDASGGVDGRVSL 108
>sp|P48983|TAL2_NOSP7 Transaldolase 2 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=tal2 PE=3 SV=1 Length = 381
Score = 73.2 bits (178), Expect = 1e-12 Identities = 38/96 (39%), Positives = 59/96 (61%), Gaps = 4/96 (4%) Frame = +3
Query: 378 QSPWYDNLRRPVT---DLKPLIE-KGIRGVTSNPTIFQKAISSSNAYDDQFRQLIQEGKG 545 QS W DNL R + +LK ++E +GI G+TSNP IF+KAI+ + YD ++ G Sbjct: 14 QSIWMDNLTRDIIQSGELKDMVENQGISGITSNPAIFEKAIAGNAIYDADIEAGVRAGLP 73
Query: 546 VEEAYWGLVVKDIQDACKLFHDIHKESNGEDGHVSV 653 + + Y LV DI++AC + +++ SN DG+VS+ Sbjct: 74 IYKIYESLVFADIRNACDILRPVYEASNRLDGYVSI 109
>sp|Q6AF36|TAL_LEIXX Transaldolase OS=Leifsonia xyli subsp. xyli GN=tal PE=3 SV=1 Length = 381
Score = 72.0 bits (175), Expect = 3e-12 Identities = 39/93 (41%), Positives = 55/93 (59%), Gaps = 4/93 (4%) Frame = +3
Query: 387 WYDNLRRPVT---DLKPLI-EKGIRGVTSNPTIFQKAISSSNAYDDQFRQLIQEGKGVEE 554 W D+L R L+ LI EK + GVT+NPTIF A++ AYD+Q R L G VE+ Sbjct: 23 WLDDLSRERIASGGLQRLIAEKNVVGVTTNPTIFAAALAQGAAYDEQVRGLAATGVSVED 82
Query: 555 AYWGLVVKDIQDACKLFHDIHKESNGEDGHVSV 653 A + + D+ DA +FHD++ + G DG VS+ Sbjct: 83 AIFEITTDDVADASDIFHDVYTATGGVDGRVSI 115
>sp|P48993|TAL2_ANASP Transaldolase 2 OS=Anabaena sp. (strain PCC 7120) GN=tal2 PE=3 SV=2 Length = 381
Score = 71.2 bits (173), Expect = 4e-12 Identities = 38/96 (39%), Positives = 59/96 (61%), Gaps = 4/96 (4%) Frame = +3
Query: 378 QSPWYDNLRRPVT---DLKPLIE-KGIRGVTSNPTIFQKAISSSNAYDDQFRQLIQEGKG 545 QS W DNL R + +LK L+E +GI G+TSNP IF+KAI+++ YD ++ G Sbjct: 14 QSIWMDNLSRDIIQSGELKNLVENQGICGITSNPAIFEKAIANNVIYDADIEAGVRAGLP 73
Query: 546 VEEAYWGLVVKDIQDACKLFHDIHKESNGEDGHVSV 653 + Y L+ DI++AC + +++ SN DG+VS+ Sbjct: 74 TYKIYESLIFADIRNACDILRPVYEASNKLDGYVSI 109
>sp|Q0RH18|TAL_FRAAA Transaldolase OS=Frankia alni (strain ACN14a) GN=tal PE=3 SV=1 Length = 371
Score = 68.6 bits (166), Expect = 3e-11 Identities = 37/93 (39%), Positives = 55/93 (59%), Gaps = 4/93 (4%) Frame = +3
Query: 387 WYDNLRRP---VTDLKPLI-EKGIRGVTSNPTIFQKAISSSNAYDDQFRQLIQEGKGVEE 554 W D++ R +L L+ + + GVTSNPTIFQKAI+SS+ Y++Q R L G V E Sbjct: 16 WLDDISRDRLRTGNLADLVANRSVVGVTSNPTIFQKAIASSDLYNEQLRDLKVRGVDVGE 75
Query: 555 AYWGLVVKDIQDACKLFHDIHKESNGEDGHVSV 653 A + D+++AC + ++ S G DG VS+ Sbjct: 76 AVRAITAADVREACDVLRGVYDASGGVDGRVSL 108
>sp|A9WT40|TAL_RENSM Transaldolase OS=Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / IFO 15589) GN=tal PE=3 SV=1 Length = 374
Score = 67.4 bits (163), Expect = 6e-11 Identities = 39/95 (41%), Positives = 54/95 (56%), Gaps = 4/95 (4%) Frame = +3
Query: 381 SPWYDNLRRPVT---DLKPLI-EKGIRGVTSNPTIFQKAISSSNAYDDQFRQLIQEGKGV 548 S W D+L R L+ LI EK + GVT+NP+IFQ AIS +Y+ Q +L +G V Sbjct: 14 SIWLDDLSRERLTSGSLQKLIDEKNVVGVTTNPSIFQAAISKGTSYEQQVSELAAQGADV 73
Query: 549 EEAYWGLVVKDIQDACKLFHDIHKESNGEDGHVSV 653 E A + + +D+ +AC F I S G DG VS+ Sbjct: 74 EAAVFQITTQDVANACDFFAGIAVASKGVDGRVSI 108
>sp|Q9XAC0|TAL2_STRCO Transaldolase 2 OS=Streptomyces coelicolor GN=tal2 PE=3 SV=1 Length = 372
Score = 66.6 bits (161), Expect = 1e-10 Identities = 38/99 (38%), Positives = 59/99 (59%), Gaps = 4/99 (4%) Frame = +3
Query: 369 DQKQSPWYDNL-RRPVT--DLKPLIEKG-IRGVTSNPTIFQKAISSSNAYDDQFRQLIQE 536 D+ + W D+L R+ +T +L LI++ + GVT+NP+IFQKAIS + YD Q L Sbjct: 10 DEGVAIWLDDLSRKRITSGNLAELIDQQHVVGVTTNPSIFQKAISQGDGYDQQLADLAVR 69
Query: 537 GKGVEEAYWGLVVKDIQDACKLFHDIHKESNGEDGHVSV 653 G VEEA + D++DA + ++ + G+DG VS+ Sbjct: 70 GVTVEEAIRMITTADVRDAADILRPVYDNTGGKDGRVSI 108
>sp|A1KVT3|TAL_NEIMF Transaldolase OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=tal PE=3 SV=1 Length = 351
Score = 63.5 bits (153), Expect = 9e-10 Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 3/95 (3%) Frame = +3
Query: 378 QSPWYDNLRRPVT---DLKPLIEKGIRGVTSNPTIFQKAISSSNAYDDQFRQLIQEGKGV 548 Q W DNL R + +L ++++G+ GVTSNP IFQKA + Y D+ L Q+ Sbjct: 12 QQIWLDNLSRSLVQSGELAQMLKQGVCGVTSNPAIFQKAFAGDALYADEVAALKQQDLTP 71
Query: 549 EEAYWGLVVKDIQDACKLFHDIHKESNGEDGHVSV 653 ++ Y + V D+Q AC + H+ + G+ G VS+ Sbjct: 72 KQRYETMAVADVQAACDVCLAEHESTGGKTGFVSL 106
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LKR1 |
Definition |
tr|B8LKR1|B8LKR1_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
119 |
Score (bit) |
179.0 |
E-value |
2.0e-43 |
Report |
|