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NBDC - LSDB Archive
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DK957971
Clone id TST39A01NGRL0029_M12
Library
Length 666
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0029_M12. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GGGACAACTTTGTACAAAAAAGGTTGGCGAGCAGGCCTGCTCGAGCGGAGTTTGTTCGCC
ACTTGTCTCTCTAGACGAGGGCTTGTAGCTTGCTGCTTCCATGGCGTCTACTGCCACTAG
CCCTACTGTTGGCTCCGTCCAGAATTTCACACCAGTAAATGGAACCCCCGTCCGTGTAAG
GAGCACCGCTCCTGCTTCTGCCTTCTTTGGGGCCTCCCTGAAGAAAACCGCCCCTTCCGT
TGTATCTAGCAATATTGCCAAGCATTTCGTTGTGCACGCTTCGGAGGATGAGGGCAAGCA
GACGAAGAAGGACAGATGGGCTGGTCTTGCATATGACACCTCCGATGACCAGCAAGACAT
CACTCGTGGAAAAGGCATGGTGGACGCTCTTTTCCAAGGTGCAGTTGGTGTAGGAACTCA
ACACGCCGTCATGAGTTCGTATGACTATATTAGCCAGGGCCAGAGAATGTTCTCCATGGA
CAACATGAAGGATGGCTATTACATCGCCCCTGCCTTCATGGACAAACTGGTTGTGCACAT
TGCCAAGAACTTCATGAACTTACCAAATATCANGGTGCCTTTGATTCTTGGTATTTGGGG
TGGCAAGGGGCAAGGCAAGTCCTTCCAGTGTGAGCTTGTCTTTTCAAAGTTGGGAATCAA
CCCAAT
■■Homology search results ■■ -
sp_hit_id Q7X999
Definition sp|Q7X999|RCA2_LARTR Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Larrea tridentata
Align length 170
Score (bit) 228.0
E-value 2.0e-59
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK957971|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0029_M12, 5'
         (644 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q7X999|RCA2_LARTR Ribulose bisphosphate carboxylase/oxygenase...   228   2e-59
sp|Q7X9A0|RCA1_LARTR Ribulose bisphosphate carboxylase/oxygenase...   228   2e-59
sp|Q40281|RCA_MALDO Ribulose bisphosphate carboxylase/oxygenase ...   221   3e-57
sp|Q01587|RCA_CUCSA Ribulose bisphosphate carboxylase/oxygenase ...   221   3e-57
sp|O98997|RCA_PHAAU Ribulose bisphosphate carboxylase/oxygenase ...   220   4e-57
sp|P93431|RCA_ORYSJ Ribulose bisphosphate carboxylase/oxygenase ...   220   6e-57
sp|Q40460|RCA1_TOBAC Ribulose bisphosphate carboxylase/oxygenase...   218   2e-56
sp|P10896|RCA_ARATH Ribulose bisphosphate carboxylase/oxygenase ...   217   4e-56
sp|O64981|RCA_PHAVU Ribulose bisphosphate carboxylase/oxygenase ...   217   5e-56
sp|Q40565|RCA2_TOBAC Ribulose bisphosphate carboxylase/oxygenase...   213   9e-55
sp|O49074|RCA_SOLPN Ribulose bisphosphate carboxylase/oxygenase ...   211   2e-54
sp|Q9ZT00|RCA_MAIZE Ribulose bisphosphate carboxylase/oxygenase ...   211   3e-54
sp|Q42450|RCAB_HORVU Ribulose bisphosphate carboxylase/oxygenase...   210   6e-54
sp|Q40073|RCAA_HORVU Ribulose bisphosphate carboxylase/oxygenase...   210   6e-54
sp|P10871|RCA_SPIOL Ribulose bisphosphate carboxylase/oxygenase ...   196   9e-50
sp|P23489|RCA_CHLRE Ribulose bisphosphate carboxylase/oxygenase ...   153   6e-37
sp|Q06721|RCA_ANASC Ribulose bisphosphate carboxylase/oxygenase ...    88   4e-17
sp|P58555|RCA_ANASP Ribulose bisphosphate carboxylase/oxygenase ...    87   6e-17
sp|P85086|RCA_ARAHY Ribulose bisphosphate carboxylase/oxygenase ...    74   8e-13
sp|P17556|DHA_BACSH Alanine dehydrogenase OS=Bacillus sphaericus...    35   0.44 
sp|P85111|RCA_VITSX Ribulose bisphosphate carboxylase/oxygenase ...    32   2.2  
sp|P27643|SP5K_BACSU Stage V sporulation protein K OS=Bacillus s...    32   3.7  
sp|P08679|CISY2_YEAST Citrate synthase, peroxisomal OS=Saccharom...    32   3.7  
sp|P37539|YAAR_BACSU Uncharacterized protein yaaR OS=Bacillus su...    31   4.8  
sp|Q9CBU4|Y1582_MYCLE Putative zinc metalloprotease ML1582 OS=My...    31   4.8  
sp|Q4L750|DHA_STAHJ Alanine dehydrogenase OS=Staphylococcus haem...    31   4.8  
sp|Q9ER38|TOR3A_MOUSE Torsin-3A OS=Mus musculus GN=Tor3a PE=2 SV=2     31   6.3  
sp|Q55EL3|UCKA_DICDI Uridine/cytidine kinase A OS=Dictyostelium ...    30   8.2  
sp|Q7ZV79|UCK2B_DANRE Uridine-cytidine kinase 2-B OS=Danio rerio...    30   8.2  
sp|Q5M936|TOR3A_RAT Torsin-3A OS=Rattus norvegicus GN=Tor3a PE=2...    30   8.2  

>sp|Q7X999|RCA2_LARTR Ribulose bisphosphate carboxylase/oxygenase
           activase 2, chloroplastic OS=Larrea tridentata GN=RCA2
           PE=2 SV=1
          Length = 435

 Score =  228 bits (582), Expect = 2e-59
 Identities = 111/170 (65%), Positives = 133/170 (78%)
 Frame = +1

Query: 133 VNGTPVRVRSTAPASAFFGASLKKTAPSVVSSNIAKHFVVHASEDEGKQTKKDRWAGLAY 312
           +NG+  R  S  P++AFFG+SLKK+A     ++     +V     E +QT KD+W GLAY
Sbjct: 18  LNGSGARA-SLVPSTAFFGSSLKKSAAKFPKASSGNFKIVAQEISEDQQTDKDKWKGLAY 76

Query: 313 DTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGYYIAPA 492
           D SDDQQDITRGKGMVD LFQ  +  GT +AVMSSYDYISQG R +++DN  DG+YIAPA
Sbjct: 77  DISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGLRQYNLDNNMDGFYIAPA 136

Query: 493 FMDKLVVHIAKNFMNLPNIXVPLILGIWGGKGQGKSFQCELVFSKLGINP 642
           FMDKLVVHI KNF++LPNI +PLILGIWGGKGQGKSFQCELVF+K+GINP
Sbjct: 137 FMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINP 186


>sp|Q7X9A0|RCA1_LARTR Ribulose bisphosphate carboxylase/oxygenase
           activase 1, chloroplastic OS=Larrea tridentata GN=RCA1
           PE=2 SV=1
          Length = 476

 Score =  228 bits (582), Expect = 2e-59
 Identities = 111/170 (65%), Positives = 133/170 (78%)
 Frame = +1

Query: 133 VNGTPVRVRSTAPASAFFGASLKKTAPSVVSSNIAKHFVVHASEDEGKQTKKDRWAGLAY 312
           +NG+  R  S  P++AFFG+SLKK+A     ++     +V     E +QT KD+W GLAY
Sbjct: 18  LNGSGARA-SLVPSTAFFGSSLKKSAAKFPKASSGNFKIVAQEISEDQQTDKDKWKGLAY 76

Query: 313 DTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGYYIAPA 492
           D SDDQQDITRGKGMVD LFQ  +  GT +AVMSSYDYISQG R +++DN  DG+YIAPA
Sbjct: 77  DISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGLRQYNLDNNMDGFYIAPA 136

Query: 493 FMDKLVVHIAKNFMNLPNIXVPLILGIWGGKGQGKSFQCELVFSKLGINP 642
           FMDKLVVHI KNF++LPNI +PLILGIWGGKGQGKSFQCELVF+K+GINP
Sbjct: 137 FMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINP 186


>sp|Q40281|RCA_MALDO Ribulose bisphosphate carboxylase/oxygenase
           activase, chloroplastic OS=Malus domestica GN=RCA PE=2
           SV=1
          Length = 437

 Score =  221 bits (563), Expect = 3e-57
 Identities = 113/180 (62%), Positives = 133/180 (73%), Gaps = 1/180 (0%)
 Frame = +1

Query: 106 VGSVQNFTPVNGTPVRVRSTAPASAFFGASLKKTAPSVVSSNIAKHFV-VHASEDEGKQT 282
           +GSV N  P N       ++ P+S F G+SLKK      +S ++   + + AS DE KQT
Sbjct: 8   IGSV-NRAPPNLNGSSSSASVPSSTFLGSSLKKVNSRFTNSKVSSGSLRIVASVDEDKQT 66

Query: 283 KKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDN 462
            KDRW GLA+DTSDDQQDITRGKG VD+LFQ   G GT  A+MSSY+YIS G R ++ DN
Sbjct: 67  DKDRWKGLAFDTSDDQQDITRGKGKVDSLFQAPQGSGTHFAIMSSYEYISTGLRQYNFDN 126

Query: 463 MKDGYYIAPAFMDKLVVHIAKNFMNLPNIXVPLILGIWGGKGQGKSFQCELVFSKLGINP 642
             DGYYIAPAFMDKLVVHI KNFM LPN+ VPLILGIWGGKGQGKSFQCELVF+K+ I+P
Sbjct: 127 NMDGYYIAPAFMDKLVVHITKNFMTLPNMKVPLILGIWGGKGQGKSFQCELVFAKMRISP 186


>sp|Q01587|RCA_CUCSA Ribulose bisphosphate carboxylase/oxygenase
           activase, chloroplastic OS=Cucumis sativus PE=2 SV=1
          Length = 413

 Score =  221 bits (562), Expect = 3e-57
 Identities = 104/158 (65%), Positives = 125/158 (79%)
 Frame = +1

Query: 169 PASAFFGASLKKTAPSVVSSNIAKHFVVHASEDEGKQTKKDRWAGLAYDTSDDQQDITRG 348
           P SAF G+ LK ++    S  +  +F + A +DE KQT+KD+W GLA+DTSDDQQDITRG
Sbjct: 26  PNSAFLGSRLKVSSRFTTSKMVTGNFKIVAEQDEEKQTEKDKWRGLAFDTSDDQQDITRG 85

Query: 349 KGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGYYIAPAFMDKLVVHIAKN 528
           KG+ D LFQ  +G GT +AV+SSY+YIS G R +S DN  DG+YIAPAFMDKL VHI KN
Sbjct: 86  KGLADPLFQAPMGTGTHNAVLSSYEYISAGLRDYSYDNNVDGFYIAPAFMDKLTVHIVKN 145

Query: 529 FMNLPNIXVPLILGIWGGKGQGKSFQCELVFSKLGINP 642
           F+ LPNI VPLILG+WGGKGQGKSFQCELVF+K+GINP
Sbjct: 146 FLTLPNIKVPLILGVWGGKGQGKSFQCELVFAKMGINP 183


>sp|O98997|RCA_PHAAU Ribulose bisphosphate carboxylase/oxygenase
           activase, chloroplastic OS=Phaseolus aureus GN=RCA PE=2
           SV=2
          Length = 439

 Score =  220 bits (561), Expect = 4e-57
 Identities = 112/166 (67%), Positives = 131/166 (78%), Gaps = 5/166 (3%)
 Frame = +1

Query: 160 STAPASAFFGASLKKTAPSVVSSNIAKH--FVVHASE---DEGKQTKKDRWAGLAYDTSD 324
           ++AP SAFFG SLKK   S V ++   +  F + A+E   +E +QT KDRW GLAYD SD
Sbjct: 25  ASAPTSAFFGTSLKKAVASRVPNSKVTNGSFKIVAAEKEIEESQQTNKDRWKGLAYDISD 84

Query: 325 DQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGYYIAPAFMDK 504
           DQQDITRGKGMVD LFQ  +  GT +AVMSSY+Y+S G R   +DN+KDG+YIAPAF+DK
Sbjct: 85  DQQDITRGKGMVDPLFQAPMDAGTHYAVMSSYEYLSTGLRQ--LDNIKDGFYIAPAFLDK 142

Query: 505 LVVHIAKNFMNLPNIXVPLILGIWGGKGQGKSFQCELVFSKLGINP 642
           LVVHI KNFM LPNI VPLILGIWGGKGQGKSFQCELVF+K+GINP
Sbjct: 143 LVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINP 188


>sp|P93431|RCA_ORYSJ Ribulose bisphosphate carboxylase/oxygenase
           activase, chloroplastic OS=Oryza sativa subsp. japonica
           GN=RCA PE=1 SV=2
          Length = 466

 Score =  220 bits (560), Expect = 6e-57
 Identities = 113/167 (67%), Positives = 125/167 (74%), Gaps = 8/167 (4%)
 Frame = +1

Query: 166 APASA---FFGASLKKTAPSVV-----SSNIAKHFVVHASEDEGKQTKKDRWAGLAYDTS 321
           APAS    F G  LKK   S V     SSNI +  V+    DEGKQT +DRW GLAYD S
Sbjct: 11  APASTPTNFLGKKLKKQVTSAVNYHGKSSNINRFKVMAKELDEGKQTDQDRWKGLAYDIS 70

Query: 322 DDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGYYIAPAFMD 501
           DDQQDITRGKG VD+LFQ   G GT  AV+SSY+Y+SQG R +  DN   G+YIAPAFMD
Sbjct: 71  DDQQDITRGKGFVDSLFQAPTGDGTHEAVLSSYEYLSQGLRTYDFDNTMGGFYIAPAFMD 130

Query: 502 KLVVHIAKNFMNLPNIXVPLILGIWGGKGQGKSFQCELVFSKLGINP 642
           KLVVHI+KNFM LPNI VPLILGIWGGKGQGKSFQCELVF+K+GINP
Sbjct: 131 KLVVHISKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINP 177


>sp|Q40460|RCA1_TOBAC Ribulose bisphosphate carboxylase/oxygenase
           activase 1, chloroplastic OS=Nicotiana tabacum PE=2 SV=1
          Length = 442

 Score =  218 bits (556), Expect = 2e-56
 Identities = 113/187 (60%), Positives = 132/187 (70%), Gaps = 10/187 (5%)
 Frame = +1

Query: 112 SVQNFTPVNGTPVRVRSTA-----PASAFFGASLKKTAPSVVSS----NIAKHFVVHASE 264
           SV     VN TP+ + ++      P++AFFG +LKK     VSS    N +   V    +
Sbjct: 4   SVSTIGAVNKTPLSLNNSVAGTSVPSTAFFGKTLKKVYGKGVSSPKVTNKSLRIVAEQID 63

Query: 265 -DEGKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQ 441
            D  KQT  DRW GL  D SDDQQDITRGKGMVD+LFQ   G GT HAV+ SY+Y+SQG 
Sbjct: 64  VDPKKQTDSDRWKGLVQDFSDDQQDITRGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGL 123

Query: 442 RMFSMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIXVPLILGIWGGKGQGKSFQCELVF 621
           R +++DN  DG+YIAPAFMDKLVVHI KNF+ LPNI VPLILGIWGGKGQGKSFQCELVF
Sbjct: 124 RQYNLDNKLDGFYIAPAFMDKLVVHITKNFLKLPNIKVPLILGIWGGKGQGKSFQCELVF 183

Query: 622 SKLGINP 642
            K+GINP
Sbjct: 184 RKMGINP 190


>sp|P10896|RCA_ARATH Ribulose bisphosphate carboxylase/oxygenase
           activase, chloroplastic OS=Arabidopsis thaliana GN=RCA
           PE=1 SV=2
          Length = 474

 Score =  217 bits (553), Expect = 4e-56
 Identities = 104/160 (65%), Positives = 123/160 (76%)
 Frame = +1

Query: 163 TAPASAFFGASLKKTAPSVVSSNIAKHFVVHASEDEGKQTKKDRWAGLAYDTSDDQQDIT 342
           +APAS F G  +   +    S+  +       +  E KQT  DRW GLAYDTSDDQQDIT
Sbjct: 27  SAPASTFLGKKVVTVSRFAQSNKKSNGSFKVLAVKEDKQTDGDRWRGLAYDTSDDQQDIT 86

Query: 343 RGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGYYIAPAFMDKLVVHIA 522
           RGKGMVD++FQ  +G GT HAV+SSY+Y+SQG R +++DNM DG+YIAPAFMDKLVVHI 
Sbjct: 87  RGKGMVDSVFQAPMGTGTHHAVLSSYEYVSQGLRQYNLDNMMDGFYIAPAFMDKLVVHIT 146

Query: 523 KNFMNLPNIXVPLILGIWGGKGQGKSFQCELVFSKLGINP 642
           KNF+ LPNI VPLILGIWGGKGQGKSFQCELV +K+GINP
Sbjct: 147 KNFLTLPNIKVPLILGIWGGKGQGKSFQCELVMAKMGINP 186


>sp|O64981|RCA_PHAVU Ribulose bisphosphate carboxylase/oxygenase
           activase, chloroplastic OS=Phaseolus vulgaris GN=RCA1
           PE=2 SV=1
          Length = 441

 Score =  217 bits (552), Expect = 5e-56
 Identities = 106/166 (63%), Positives = 133/166 (80%), Gaps = 5/166 (3%)
 Frame = +1

Query: 160 STAPASAFFGASLKKTAPSVVSSN--IAKHFVVHASE---DEGKQTKKDRWAGLAYDTSD 324
           ++ P+SAFFG SLKK   S V ++   +  F + A++   +E +QT+ DRW GLAYD SD
Sbjct: 25  ASGPSSAFFGTSLKKVISSRVPNSKLTSGSFKIVAADKEIEETQQTEGDRWRGLAYDVSD 84

Query: 325 DQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGYYIAPAFMDK 504
           DQQDITRGKG+VD+LFQ  +  GT +AV+SS+ Y+S G R ++ DN+KDG+YIAPAF+DK
Sbjct: 85  DQQDITRGKGLVDSLFQAPMDAGTHYAVISSHKYLSAGLRQYNFDNIKDGFYIAPAFLDK 144

Query: 505 LVVHIAKNFMNLPNIXVPLILGIWGGKGQGKSFQCELVFSKLGINP 642
           LVVHIAKNFM LPNI VPLILG+WGGKGQGKSFQCELVF+K+GINP
Sbjct: 145 LVVHIAKNFMTLPNIKVPLILGVWGGKGQGKSFQCELVFAKMGINP 190


>sp|Q40565|RCA2_TOBAC Ribulose bisphosphate carboxylase/oxygenase
           activase 2, chloroplastic OS=Nicotiana tabacum GN=RCA
           PE=2 SV=1
          Length = 439

 Score =  213 bits (541), Expect = 9e-55
 Identities = 109/187 (58%), Positives = 130/187 (69%), Gaps = 10/187 (5%)
 Frame = +1

Query: 112 SVQNFTPVNGTPVRVRSTA-----PASAFFGASLKKTAPSVVSS-NIAKHFVVHASE--- 264
           SV      N  P+ + ++      P++AFFG +LKK     VSS  +    +  A+E   
Sbjct: 4   SVSTIGAANKAPLSLNNSVAGTSVPSTAFFGKTLKKVYGKGVSSPKVTNRSLRIAAEEKD 63

Query: 265 -DEGKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQ 441
            D  KQT  DRW GL  D SDDQQDI RGKGMVD+LFQ   G GT HAV+ SY+Y+SQG 
Sbjct: 64  ADPKKQTYSDRWKGLVQDFSDDQQDIARGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGL 123

Query: 442 RMFSMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIXVPLILGIWGGKGQGKSFQCELVF 621
           R ++MDN  DG+YIAP+FMDKLVVHI KNF+ LPNI VPLILG+WGGKGQGKSFQCELVF
Sbjct: 124 RQYNMDNTLDGFYIAPSFMDKLVVHITKNFLKLPNIKVPLILGVWGGKGQGKSFQCELVF 183

Query: 622 SKLGINP 642
            K+GINP
Sbjct: 184 RKMGINP 190
tr_hit_id A9TJI2
Definition tr|A9TJI2|A9TJI2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 164
Score (bit) 234.0
E-value 3.0e-60
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK957971|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0029_M12, 5'
         (644 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9TJI2|A9TJI2_PHYPA Predicted protein OS=Physcomitrella paten...   234   3e-60
tr|A7NYV5|A7NYV5_VITVI Chromosome chr6 scaffold_3, whole genome ...   234   4e-60
tr|A5C3D4|A5C3D4_VITVI Putative uncharacterized protein OS=Vitis...   234   4e-60
tr|A9NZT0|A9NZT0_PICSI Putative uncharacterized protein OS=Picea...   229   1e-58
tr|A9NX94|A9NX94_PICSI Putative uncharacterized protein OS=Picea...   229   1e-58
tr|A9NV87|A9NV87_PICSI Putative uncharacterized protein OS=Picea...   229   1e-58
tr|A7PNR4|A7PNR4_VITVI Chromosome chr8 scaffold_23, whole genome...   228   3e-58
tr|Q06B51|Q06B51_ACERU Chloroplast ribulose-1,5-bisphosphate car...   227   4e-58
tr|Q06B50|Q06B50_ACERU Chloroplast ribulose-1,5-bisphosphate car...   227   4e-58
tr|A9PJ06|A9PJ06_POPJC Putative uncharacterized protein OS=Popul...   227   5e-58
tr|A9PJF4|A9PJF4_POPJC Putative uncharacterized protein OS=Popul...   226   7e-58
tr|A9PFQ2|A9PFQ2_POPTR Putative uncharacterized protein OS=Popul...   225   2e-57
tr|A7PIQ8|A7PIQ8_VITVI Chromosome chr13 scaffold_17, whole genom...   224   3e-57
tr|Q06B49|Q06B49_ACERU Chloroplast ribulose-1,5-bisphosphate car...   223   6e-57
tr|Q06B48|Q06B48_ACERU Chloroplast ribulose-1,5-bisphosphate car...   223   6e-57
tr|O82428|O82428_DATGL Rubisco activase OS=Datisca glomerata PE=...   223   6e-57
tr|A9PGU7|A9PGU7_POPTR Putative uncharacterized protein OS=Popul...   222   1e-56
tr|A9TBP0|A9TBP0_PHYPA Predicted protein OS=Physcomitrella paten...   222   2e-56
tr|Q9AXG1|Q9AXG1_GOSHI Ribulose-1,5-bisphosphate carboxylase/oxy...   220   5e-56
tr|A9UHW7|A9UHW7_IPOBA Rubisco activase OS=Ipomoea batatas GN=rc...   220   5e-56
tr|B8BIM0|B8BIM0_ORYSI Putative uncharacterized protein OS=Oryza...   220   7e-56
tr|B7EAB2|B7EAB2_ORYSJ cDNA clone:J013001C24, full insert sequen...   220   7e-56
tr|A3KN35|A3KN35_BOVIN Putative uncharacterized protein OS=Bos t...   220   7e-56
tr|B1PDJ9|B1PDJ9_CAPAN Chloroplast rubisco activase OS=Capsicum ...   219   1e-55
tr|A9RES5|A9RES5_PHYPA Predicted protein OS=Physcomitrella paten...   218   2e-55
tr|Q941B7|Q941B7_ARATH At2g39730/T5I7.3 OS=Arabidopsis thaliana ...   217   4e-55
tr|Q8H172|Q8H172_ARATH At2g39730/T5I7.3 OS=Arabidopsis thaliana ...   217   4e-55
tr|Q3EBJ5|Q3EBJ5_ARATH Uncharacterized protein At2g39730.3 OS=Ar...   217   4e-55
tr|Q9ATB9|Q9ATB9_ZANAE Rubisco activase (Fragment) OS=Zantedesch...   215   2e-54
tr|A8W9B0|A8W9B0_FLABI Chloroplast ribulose 1,5-bisphosphate car...   215   2e-54

>tr|A9TJI2|A9TJI2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_195670 PE=4 SV=1
          Length = 471

 Score =  234 bits (597), Expect = 3e-60
 Identities = 118/164 (71%), Positives = 132/164 (80%)
 Frame = +1

Query: 151 RVRSTAPASAFFGASLKKTAPSVVSSNIAKHFVVHASEDEGKQTKKDRWAGLAYDTSDDQ 330
           RV+ST P+SAFFG   K +A   +     K  VV  +E E  +TK DRWAGL  D SDDQ
Sbjct: 17  RVKSTVPSSAFFGCKSKVSANGTLGIANGKSRVV--AEAESSKTKVDRWAGLGNDISDDQ 74

Query: 331 QDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGYYIAPAFMDKLV 510
           QDI RGKGMVDALFQGA G+GTQ+A+MSS+ Y+SQGQR +SMDN+KDG YIAPAFMDKLV
Sbjct: 75  QDIQRGKGMVDALFQGAQGLGTQNAIMSSWGYVSQGQRTYSMDNIKDGLYIAPAFMDKLV 134

Query: 511 VHIAKNFMNLPNIXVPLILGIWGGKGQGKSFQCELVFSKLGINP 642
           +HIAKNFMNLP I VPLILGIWGGKGQGKSFQCELV SKLGINP
Sbjct: 135 IHIAKNFMNLPGIKVPLILGIWGGKGQGKSFQCELVMSKLGINP 178


>tr|A7NYV5|A7NYV5_VITVI Chromosome chr6 scaffold_3, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00024270001
           PE=4 SV=1
          Length = 472

 Score =  234 bits (596), Expect = 4e-60
 Identities = 119/183 (65%), Positives = 138/183 (75%), Gaps = 6/183 (3%)
 Frame = +1

Query: 112 SVQNFTPVNGTPVRVRSTA-----PASAFFGASLKKTAPSVVSSNIAK-HFVVHASEDEG 273
           +V     VN TP+ + S+      P+SAFFG+SLKK +       IA   F V A  DE 
Sbjct: 4   TVSTIGAVNRTPLSLNSSGTGASVPSSAFFGSSLKKVSSRFTHPKIASGSFKVVAEIDEN 63

Query: 274 KQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFS 453
           +QT+KDRW GLAYD SDDQQDITRGKGMVD+LFQ  +  GT +AVMSSY+Y+S G R ++
Sbjct: 64  EQTEKDRWKGLAYDVSDDQQDITRGKGMVDSLFQAPMQSGTHYAVMSSYEYLSTGLRQYN 123

Query: 454 MDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIXVPLILGIWGGKGQGKSFQCELVFSKLG 633
           +DN  DG+YIAPAFMDKLVVHI KNFM LPNI VPLILGIWGGKGQGKSFQCELVFSK+G
Sbjct: 124 LDNNMDGFYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFSKMG 183

Query: 634 INP 642
           INP
Sbjct: 184 INP 186


>tr|A5C3D4|A5C3D4_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_039112 PE=4 SV=1
          Length = 472

 Score =  234 bits (596), Expect = 4e-60
 Identities = 119/183 (65%), Positives = 138/183 (75%), Gaps = 6/183 (3%)
 Frame = +1

Query: 112 SVQNFTPVNGTPVRVRSTA-----PASAFFGASLKKTAPSVVSSNIAK-HFVVHASEDEG 273
           +V     VN TP+ + S+      P+SAFFG+SLKK +       IA   F V A  DE 
Sbjct: 4   TVSTIGAVNRTPLSLNSSGTGXSVPSSAFFGSSLKKVSSRFTHPKIASGSFKVVAEIDEN 63

Query: 274 KQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFS 453
           +QT+KDRW GLAYD SDDQQDITRGKGMVD+LFQ  +  GT +AVMSSY+Y+S G R ++
Sbjct: 64  EQTEKDRWKGLAYDVSDDQQDITRGKGMVDSLFQAPMQSGTHYAVMSSYEYLSTGLRQYN 123

Query: 454 MDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIXVPLILGIWGGKGQGKSFQCELVFSKLG 633
           +DN  DG+YIAPAFMDKLVVHI KNFM LPNI VPLILGIWGGKGQGKSFQCELVFSK+G
Sbjct: 124 LDNNMDGFYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFSKMG 183

Query: 634 INP 642
           INP
Sbjct: 184 INP 186


>tr|A9NZT0|A9NZT0_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 363

 Score =  229 bits (583), Expect = 1e-58
 Identities = 112/178 (62%), Positives = 133/178 (74%), Gaps = 1/178 (0%)
 Frame = +1

Query: 112 SVQNFTPVNGTPVRVRSTAPASAFFGASLKKTAPSVVSS-NIAKHFVVHASEDEGKQTKK 288
           +V +  P++     +  T P++ FFG  LKKT+ +   +   A HF V A  DEGKQT K
Sbjct: 12  TVSSNLPLSSGQASILKTVPSTGFFGCGLKKTSFNASHTFTKANHFKVVAEIDEGKQTDK 71

Query: 289 DRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMK 468
           D+W GLA+D SDDQ DI RGKG VD+LFQ  +G GT + VMS+YDYIS  QR +  DN  
Sbjct: 72  DKWKGLAFDESDDQMDIRRGKGKVDSLFQAPMGSGTHNVVMSTYDYISTAQRTYDFDNTM 131

Query: 469 DGYYIAPAFMDKLVVHIAKNFMNLPNIXVPLILGIWGGKGQGKSFQCELVFSKLGINP 642
           DGYYIAP+FMDKL+VHI+KNFMNLPNI VPLILGIWGGKGQGKSFQCELVF+KLGINP
Sbjct: 132 DGYYIAPSFMDKLLVHISKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFAKLGINP 189


>tr|A9NX94|A9NX94_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 440

 Score =  229 bits (583), Expect = 1e-58
 Identities = 112/178 (62%), Positives = 133/178 (74%), Gaps = 1/178 (0%)
 Frame = +1

Query: 112 SVQNFTPVNGTPVRVRSTAPASAFFGASLKKTAPSVVSS-NIAKHFVVHASEDEGKQTKK 288
           +V +  P++     +  T P++ FFG  LKKT+ +   +   A HF V A  DEGKQT K
Sbjct: 12  TVSSNLPLSSGQASILKTVPSTGFFGCGLKKTSFNASHTFTKANHFKVVAEIDEGKQTDK 71

Query: 289 DRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMK 468
           D+W GLA+D SDDQ DI RGKG VD+LFQ  +G GT + VMS+YDYIS  QR +  DN  
Sbjct: 72  DKWKGLAFDESDDQMDIRRGKGKVDSLFQAPMGSGTHNVVMSTYDYISTAQRTYDFDNTM 131

Query: 469 DGYYIAPAFMDKLVVHIAKNFMNLPNIXVPLILGIWGGKGQGKSFQCELVFSKLGINP 642
           DGYYIAP+FMDKL+VHI+KNFMNLPNI VPLILGIWGGKGQGKSFQCELVF+KLGINP
Sbjct: 132 DGYYIAPSFMDKLLVHISKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFAKLGINP 189


>tr|A9NV87|A9NV87_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 480

 Score =  229 bits (583), Expect = 1e-58
 Identities = 112/178 (62%), Positives = 133/178 (74%), Gaps = 1/178 (0%)
 Frame = +1

Query: 112 SVQNFTPVNGTPVRVRSTAPASAFFGASLKKTAPSVVSS-NIAKHFVVHASEDEGKQTKK 288
           +V +  P++     +  T P++ FFG  LKKT+ +   +   A HF V A  DEGKQT K
Sbjct: 12  TVSSNLPLSSGQASILKTVPSTGFFGCGLKKTSFNASHTFTKANHFKVVAEIDEGKQTDK 71

Query: 289 DRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMK 468
           D+W GLA+D SDDQ DI RGKG VD+LFQ  +G GT + VMS+YDYIS  QR +  DN  
Sbjct: 72  DKWKGLAFDESDDQMDIRRGKGKVDSLFQAPMGSGTHNVVMSTYDYISTAQRTYDFDNTM 131

Query: 469 DGYYIAPAFMDKLVVHIAKNFMNLPNIXVPLILGIWGGKGQGKSFQCELVFSKLGINP 642
           DGYYIAP+FMDKL+VHI+KNFMNLPNI VPLILGIWGGKGQGKSFQCELVF+KLGINP
Sbjct: 132 DGYYIAPSFMDKLLVHISKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFAKLGINP 189


>tr|A7PNR4|A7PNR4_VITVI Chromosome chr8 scaffold_23, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00021361001
           PE=4 SV=1
          Length = 474

 Score =  228 bits (580), Expect = 3e-58
 Identities = 113/175 (64%), Positives = 132/175 (75%), Gaps = 1/175 (0%)
 Frame = +1

Query: 121 NFTPVNGTPVRVRSTAPASAFFGASLKKTAPSVVSSNIAK-HFVVHASEDEGKQTKKDRW 297
           N  P+N       ++ P+SAF G SLKK +  +     +  +F V A  DE KQT KD+W
Sbjct: 12  NRAPLNLNGSGTGASVPSSAFLGNSLKKVSSKIAHPRTSSGNFKVVAEVDEEKQTSKDKW 71

Query: 298 AGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGY 477
            GLA+D SDDQQDITRGKGMVD+LFQ  +  GT +AVMSSYDYIS G R +++DN  DG+
Sbjct: 72  KGLAFDESDDQQDITRGKGMVDSLFQAPMDSGTHYAVMSSYDYISTGLRQYNLDNTMDGF 131

Query: 478 YIAPAFMDKLVVHIAKNFMNLPNIXVPLILGIWGGKGQGKSFQCELVFSKLGINP 642
           YIAPAFMDKLVVHI KNFM LPNI VPLILGIWGGKGQGKSFQCELVF+K+GINP
Sbjct: 132 YIAPAFMDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINP 186


>tr|Q06B51|Q06B51_ACERU Chloroplast ribulose-1,5-bisphosphate
           carboxylase/oxygenase activase small protein isoform
           OS=Acer rubrum PE=2 SV=1
          Length = 437

 Score =  227 bits (579), Expect = 4e-58
 Identities = 116/184 (63%), Positives = 136/184 (73%), Gaps = 7/184 (3%)
 Frame = +1

Query: 112 SVQNFTPVNGTPVRVR------STAPASAFFGASLKKTAPSVVSSNI-AKHFVVHASEDE 270
           +V     +N  P+ +       ST P SAFFG SLKK A    +  + +  F V A  DE
Sbjct: 4   AVSTVGAINSAPLSLNGSGAAGSTVPTSAFFGTSLKKVASRFPNPKVHSGSFKVVAEIDE 63

Query: 271 GKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMF 450
            KQT+KD+W GLAYDTSDDQQDITRGKG+VD+LFQ   G GT +AVMSSYDYIS G R +
Sbjct: 64  NKQTEKDKWRGLAYDTSDDQQDITRGKGLVDSLFQAPSGTGTHYAVMSSYDYISTGLRTY 123

Query: 451 SMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIXVPLILGIWGGKGQGKSFQCELVFSKL 630
            ++N  DG+YIAPAFMDKLVVHI KNFM+LPNI +PLILGIWGGKGQGKSFQCELVF+K+
Sbjct: 124 -LENSMDGFYIAPAFMDKLVVHITKNFMSLPNIKIPLILGIWGGKGQGKSFQCELVFAKM 182

Query: 631 GINP 642
           GI P
Sbjct: 183 GITP 186


>tr|Q06B50|Q06B50_ACERU Chloroplast ribulose-1,5-bisphosphate
           carboxylase/oxygenase activase large protein isoform
           OS=Acer rubrum PE=2 SV=1
          Length = 474

 Score =  227 bits (579), Expect = 4e-58
 Identities = 116/184 (63%), Positives = 136/184 (73%), Gaps = 7/184 (3%)
 Frame = +1

Query: 112 SVQNFTPVNGTPVRVR------STAPASAFFGASLKKTAPSVVSSNI-AKHFVVHASEDE 270
           +V     +N  P+ +       ST P SAFFG SLKK A    +  + +  F V A  DE
Sbjct: 4   AVSTVGAINSAPLSLNGSGAAGSTVPTSAFFGTSLKKVASRFPNPKVHSGSFKVVAEIDE 63

Query: 271 GKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMF 450
            KQT+KD+W GLAYDTSDDQQDITRGKG+VD+LFQ   G GT +AVMSSYDYIS G R +
Sbjct: 64  NKQTEKDKWRGLAYDTSDDQQDITRGKGLVDSLFQAPSGTGTHYAVMSSYDYISTGLRTY 123

Query: 451 SMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIXVPLILGIWGGKGQGKSFQCELVFSKL 630
            ++N  DG+YIAPAFMDKLVVHI KNFM+LPNI +PLILGIWGGKGQGKSFQCELVF+K+
Sbjct: 124 -LENSMDGFYIAPAFMDKLVVHITKNFMSLPNIKIPLILGIWGGKGQGKSFQCELVFAKM 182

Query: 631 GINP 642
           GI P
Sbjct: 183 GITP 186


>tr|A9PJ06|A9PJ06_POPJC Putative uncharacterized protein OS=Populus
           jackii PE=2 SV=1
          Length = 476

 Score =  227 bits (578), Expect = 5e-58
 Identities = 119/181 (65%), Positives = 137/181 (75%), Gaps = 2/181 (1%)
 Frame = +1

Query: 106 VGSVQNFTPVNGTPVRVRSTAPASAFFGASLKKTAPS-VVSSNIAK-HFVVHASEDEGKQ 279
           VG+V N  P+        ST P SAFFG SLKK + S   +S I+   F V A  DE KQ
Sbjct: 8   VGAV-NTAPLALNGSGAGSTVPNSAFFGNSLKKVSSSRFTNSKISSGSFKVVAEYDEKKQ 66

Query: 280 TKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMD 459
           T KDRW GL  D SDDQQDITRGKGMVD+LFQ   G GT + ++SSY+Y+SQG R +++D
Sbjct: 67  TDKDRWGGLVTDMSDDQQDITRGKGMVDSLFQAPQGTGTHNPILSSYEYLSQGLRTYNLD 126

Query: 460 NMKDGYYIAPAFMDKLVVHIAKNFMNLPNIXVPLILGIWGGKGQGKSFQCELVFSKLGIN 639
           N  DGYYIAPAFMDKLVVHI+KNFM+LPNI VPLILGIWGGKGQGKSFQCELVF+K+GIN
Sbjct: 127 NNMDGYYIAPAFMDKLVVHISKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGIN 186

Query: 640 P 642
           P
Sbjct: 187 P 187