DK957975 |
Clone id |
TST39A01NGRL0029_M16 |
Library |
TST39 |
Length |
560 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0029_M16. 5' end sequence. |
Accession |
DK957975 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1168Contig1 |
Sequence |
GTGTTGCAACGAGCTGCAGCGTTCTATTTCGCAATCCATGGCTGCGACAGAGATACCCAA ACGGATCAAGGGCAAGGTGGCTGTGGTGACTGCCTCCACGCAGGGCATTGGCTACGCCAT CGCCCGCCGGCTCGGTCTTGAAGGAGCTTCTGTCGTTATCTCCTCCCGAAAACAGAAAAA TGTTGATGAGGCTGTACAATCACTGAAAGAGTTGGGTATCGATGTGTTGGGGGTTGCATG TCATGTCGGGAATGCTGATCACAGGAAGAATCTTATCAAGAGCGCTGTTGATAAATTTGG GCGATTGGATATCTTTGTGTCAAATGCAGCAGTGAGTCCTTCAACAGATCCTATTCTCAC CATGTCAGAGGGAGCATTGGACAAGTTATGGGATATCAATGTAAAGGCGGGCGTTCTTCT CATACAGGAGGCAGCTCCACACTTAGCAGAAGGCGGTTCGGTAATTCTTATCTCTTCTGT AGCTGGCTACAATCCTCAAGGACATCTTGCAATGTATGGTGTCACAAAGACTGCCTTATT TGGTCTAACCAAGGCGCTCG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8SPU8 |
Definition |
sp|Q8SPU8|DHRS4_BOVIN Dehydrogenase/reductase SDR family member 4 OS=Bos taurus |
Align length |
178 |
Score (bit) |
166.0 |
E-value |
7.0e-41 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK957975|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0029_M16, 5' (560 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q8SPU8|DHRS4_BOVIN Dehydrogenase/reductase SDR family member ... 166 7e-41 sp|Q9GKX2|DHRS4_RABIT Dehydrogenase/reductase SDR family member ... 163 6e-40 sp|Q9BTZ2|DHRS4_HUMAN Dehydrogenase/reductase SDR family member ... 163 6e-40 sp|Q5RCF8|DHRS4_PONAB Dehydrogenase/reductase SDR family member ... 162 1e-39 sp|Q8WNV7|DHRS4_PIG Dehydrogenase/reductase SDR family member 4 ... 160 3e-39 sp|Q6PKH6|DR4L2_HUMAN Dehydrogenase/reductase SDR family member ... 154 2e-37 sp|Q99LB2|DHRS4_MOUSE Dehydrogenase/reductase SDR family member ... 154 4e-37 sp|Q13268|DHRS2_HUMAN Dehydrogenase/reductase SDR family member ... 153 6e-37 sp|Q8VID1|DHRS4_RAT Dehydrogenase/reductase SDR family member 4 ... 147 5e-35 sp|Q5HLD8|Y2049_STAEQ Uncharacterized oxidoreductase SERP2049 OS... 96 2e-19 sp|Q8CN40|Y2036_STAES Uncharacterized oxidoreductase SE_2036 OS=... 96 2e-19 sp|O07575|YHDF_BACSU Uncharacterized oxidoreductase yhdF OS=Baci... 92 1e-18 sp|P0A0I0|FABG_STAAW 3-oxoacyl-[acyl-carrier-protein] reductase ... 91 5e-18 sp|Q6G9Y2|FABG_STAAS 3-oxoacyl-[acyl-carrier-protein] reductase ... 91 5e-18 sp|Q6GHK4|FABG_STAAR 3-oxoacyl-[acyl-carrier-protein] reductase ... 91 5e-18 sp|P99093|FABG_STAAN 3-oxoacyl-[acyl-carrier-protein] reductase ... 91 5e-18 sp|P0A0H9|FABG_STAAM 3-oxoacyl-[acyl-carrier-protein] reductase ... 91 5e-18 sp|Q5HGK2|FABG_STAAC 3-oxoacyl-[acyl-carrier-protein] reductase ... 91 5e-18 sp|Q9FZ42|GRDH1_ARATH Glucose and ribitol dehydrogenase homolog ... 88 3e-17 sp|Q00791|STCU_EMENI Versicolorin reductase OS=Emericella nidula... 87 6e-17 sp|Q5KTS5|GRDH_DAUCA Glucose and ribitol dehydrogenase OS=Daucus... 86 1e-16 sp|Q9MA93|GRDH2_ARATH Glucose and ribitol dehydrogenase homolog ... 86 1e-16 sp|P50162|TRN1_DATST Tropinone reductase 1 OS=Datura stramonium ... 86 2e-16 sp|Q92EK7|Y452_LISIN Uncharacterized oxidoreductase Lin0452 OS=L... 85 3e-16 sp|P25145|Y432_LISMO Uncharacterized oxidoreductase Lmo0432 OS=L... 85 3e-16 sp|Q8CPI3|FABG_STAES 3-oxoacyl-[acyl-carrier-protein] reductase ... 84 4e-16 sp|Q5HPW0|FABG_STAEQ 3-oxoacyl-[acyl-carrier-protein] reductase ... 84 4e-16 sp|Q48436|BUDC_KLEPN Acetoin(diacetyl) reductase OS=Klebsiella p... 83 1e-15 sp|P50164|TRN2_HYONI Tropinone reductase 2 OS=Hyoscyamus niger G... 82 1e-15 sp|Q5HKG6|BUTA_STAEQ Acetoin(diacetyl) reductase OS=Staphylococc... 82 1e-15
>sp|Q8SPU8|DHRS4_BOVIN Dehydrogenase/reductase SDR family member 4 OS=Bos taurus GN=DHRS4 PE=2 SV=1 Length = 260
Score = 166 bits (420), Expect = 7e-41 Identities = 90/178 (50%), Positives = 122/178 (68%), Gaps = 4/178 (2%) Frame = +2
Query: 38 MAATEIPKR--IKGKVAVVTASTQGIGYAIARRLGLEGASVVISSRKQKNVDEAVQSLKE 211 MA+ + +R + KVA+VTAST GIG+AIARRL +GA VV+SSRKQ+NVD AV +LK Sbjct: 1 MASCGMARRNPLDNKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDRAVATLKG 60
Query: 212 LGIDVLGVACHVGNADHRKNLIKSAVDKFGRLDIFVSNAAVSPSTDPILTMSEGALDKLW 391 G+ V G CHVG A+ R+ L+ +AV G +DI +SNAAVSP ++ + E DK+ Sbjct: 61 EGLSVTGTVCHVGKAEDRERLVATAVKLHGGVDILISNAAVSPFFGSLMDVPEEVWDKIL 120
Query: 392 DINVKAGVLLIQEAAPHLAE--GGSVILISSVAGYNPQGHLAMYGVTKTALFGLTKAL 559 D+NVKA LL + P +A+ GGS++++SS+A Y+P L Y V+KTAL GLTK L Sbjct: 121 DVNVKATALLTKAVVPEMAKRGGGSIVIVSSIAAYSPFPSLGPYNVSKTALLGLTKNL 178
>sp|Q9GKX2|DHRS4_RABIT Dehydrogenase/reductase SDR family member 4 OS=Oryctolagus cuniculus GN=DHRS4 PE=1 SV=1 Length = 260
Score = 163 bits (412), Expect = 6e-40 Identities = 88/178 (49%), Positives = 123/178 (69%), Gaps = 4/178 (2%) Frame = +2
Query: 38 MAATEIPKR--IKGKVAVVTASTQGIGYAIARRLGLEGASVVISSRKQKNVDEAVQSLKE 211 MA++ + +R + KVA+VTAST GIG AIARRL +GA VVISSRKQ+NVD AV +L+ Sbjct: 1 MASSGVTRRDPLANKVAIVTASTDGIGLAIARRLAQDGAHVVISSRKQQNVDRAVAALQA 60
Query: 212 LGIDVLGVACHVGNADHRKNLIKSAVDKFGRLDIFVSNAAVSPSTDPILTMSEGALDKLW 391 G+ V G CHVG A+ R+ L+ +A++ G +DI VSNAAV+P ++ ++E DK+ Sbjct: 61 EGLSVTGTVCHVGKAEDRERLVATALNLHGGIDILVSNAAVNPFFGKLMDVTEEVWDKIL 120
Query: 392 DINVKAGVLLIQEAAPHLAE--GGSVILISSVAGYNPQGHLAMYGVTKTALFGLTKAL 559 DINVKA L+ + P + + GGSV++++S+A +NP L Y V+KTAL GLTK L Sbjct: 121 DINVKAMALMTKAVVPEMEKRGGGSVVIVASIAAFNPFSGLGPYNVSKTALVGLTKNL 178
>sp|Q9BTZ2|DHRS4_HUMAN Dehydrogenase/reductase SDR family member 4 OS=Homo sapiens GN=DHRS4 PE=1 SV=2 Length = 260
Score = 163 bits (412), Expect = 6e-40 Identities = 88/178 (49%), Positives = 123/178 (69%), Gaps = 4/178 (2%) Frame = +2
Query: 38 MAATEIPKR--IKGKVAVVTASTQGIGYAIARRLGLEGASVVISSRKQKNVDEAVQSLKE 211 MA++ + +R + KVA+VTAST GIG+AIARRL +GA VV+SSRKQ+NVD+AV +L+ Sbjct: 1 MASSGMTRRDPLANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQG 60
Query: 212 LGIDVLGVACHVGNADHRKNLIKSAVDKFGRLDIFVSNAAVSPSTDPILTMSEGALDKLW 391 G+ V G CHVG A+ R+ L+ +AV G +DI VSNAAV+P I+ ++E DK Sbjct: 61 EGLSVTGTVCHVGKAEDRERLVATAVKLHGGIDILVSNAAVNPFFGSIMDVTEEVWDKTL 120
Query: 392 DINVKAGVLLIQEAAPHLAE--GGSVILISSVAGYNPQGHLAMYGVTKTALFGLTKAL 559 DINVKA L+ + P + + GGSV+++SS+A ++P + Y V+KTAL GLTK L Sbjct: 121 DINVKAPALMTKAVVPEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTL 178
>sp|Q5RCF8|DHRS4_PONAB Dehydrogenase/reductase SDR family member 4 OS=Pongo abelii GN=DHRS4 PE=2 SV=2 Length = 260
Score = 162 bits (410), Expect = 1e-39 Identities = 87/178 (48%), Positives = 123/178 (69%), Gaps = 4/178 (2%) Frame = +2
Query: 38 MAATEIPKR--IKGKVAVVTASTQGIGYAIARRLGLEGASVVISSRKQKNVDEAVQSLKE 211 MA++ + +R + KVA+VTAST GIG+AIARRL +GA VV+SSRKQ+NVD+AV +L+ Sbjct: 1 MASSGMTRRDPLANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQG 60
Query: 212 LGIDVLGVACHVGNADHRKNLIKSAVDKFGRLDIFVSNAAVSPSTDPILTMSEGALDKLW 391 G+ V G CHVG A+ R+ L+ +AV G +DI VSNAAV+P ++ ++E DK Sbjct: 61 EGLSVTGTVCHVGKAEDRERLVATAVKLHGGIDILVSNAAVNPFFGSLMDVTEEVWDKTL 120
Query: 392 DINVKAGVLLIQEAAPHLAE--GGSVILISSVAGYNPQGHLAMYGVTKTALFGLTKAL 559 DINVKA L+ + P + + GGSV+++SS+A ++P + Y V+KTAL GLTK L Sbjct: 121 DINVKAPALMTKAVVPEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTL 178
>sp|Q8WNV7|DHRS4_PIG Dehydrogenase/reductase SDR family member 4 OS=Sus scrofa GN=DHRS4 PE=1 SV=1 Length = 260
Score = 160 bits (406), Expect = 3e-39 Identities = 89/178 (50%), Positives = 121/178 (67%), Gaps = 4/178 (2%) Frame = +2
Query: 38 MAATEIPKR--IKGKVAVVTASTQGIGYAIARRLGLEGASVVISSRKQKNVDEAVQSLKE 211 MA+T + +R ++ KVA+VTAST GIG AIARRL +GA VV+SSRKQ+NVD V +L+ Sbjct: 1 MASTGVERRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQG 60
Query: 212 LGIDVLGVACHVGNADHRKNLIKSAVDKFGRLDIFVSNAAVSPSTDPILTMSEGALDKLW 391 G+ V G CHVG A+ R+ L+ AV+ G +DI VSNAAV+P I+ +E DK+ Sbjct: 61 EGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKIL 120
Query: 392 DINVKAGVLLIQEAAPHLAE--GGSVILISSVAGYNPQGHLAMYGVTKTALFGLTKAL 559 +NVKA VL+ + P + + GGSV+++SSV Y+P +L Y V+KTAL GLTK L Sbjct: 121 HVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNL 178
>sp|Q6PKH6|DR4L2_HUMAN Dehydrogenase/reductase SDR family member 4-like 2 OS=Homo sapiens GN=DHRS4L2 PE=2 SV=1 Length = 230
Score = 154 bits (390), Expect = 2e-37 Identities = 84/181 (46%), Positives = 120/181 (66%), Gaps = 4/181 (2%) Frame = +2
Query: 29 SQSMAATEIPKR--IKGKVAVVTASTQGIGYAIARRLGLEGASVVISSRKQKNVDEAVQS 202 S +A++ + +R + KVA+VTAST GIG+AIARRL + A VV+SSRKQ+NVD+AV + Sbjct: 14 SVRLASSRMTRRDPLTNKVALVTASTDGIGFAIARRLAQDRAHVVVSSRKQQNVDQAVAT 73
Query: 203 LKELGIDVLGVACHVGNADHRKNLIKSAVDKFGRLDIFVSNAAVSPSTDPILTMSEGALD 382 L+ G+ V G CHVG A+ R+ L+ AV G +DI VSNAAV+P ++ ++E D Sbjct: 74 LQGEGLSVTGTVCHVGKAEDRERLVAMAVKLHGGIDILVSNAAVNPFFGSLMDVTEEVWD 133
Query: 383 KLWDINVKAGVLLIQEAAPHLAE--GGSVILISSVAGYNPQGHLAMYGVTKTALFGLTKA 556 K DINVKA L+ + P + + GGSV+++SS+A ++P + Y V+KTAL GL Sbjct: 134 KTLDINVKAPALMTKAVVPEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLNNT 193
Query: 557 L 559 L Sbjct: 194 L 194
>sp|Q99LB2|DHRS4_MOUSE Dehydrogenase/reductase SDR family member 4 OS=Mus musculus GN=Dhrs4 PE=2 SV=1 Length = 260
Score = 154 bits (388), Expect = 4e-37 Identities = 84/176 (47%), Positives = 120/176 (68%), Gaps = 4/176 (2%) Frame = +2
Query: 38 MAATEIPKR--IKGKVAVVTASTQGIGYAIARRLGLEGASVVISSRKQKNVDEAVQSLKE 211 MA++ + +R + KVA+VTAST GIG+AIARRL +GA VV+SSRKQ+NVD AV +L+ Sbjct: 1 MASSGLTRRNPLSNKVALVTASTDGIGFAIARRLAEDGAHVVVSSRKQQNVDRAVATLQG 60
Query: 212 LGIDVLGVACHVGNADHRKNLIKSAVDKFGRLDIFVSNAAVSPSTDPILTMSEGALDKLW 391 G+ V G+ CHVG A+ R+ LI +A+ + +DI VSNAAV+P ++ ++E DK+ Sbjct: 61 EGLSVTGIVCHVGKAEDREKLITTALKRHRGIDILVSNAAVNPFFGNLMDVTEEVWDKVL 120
Query: 392 DINVKAGVLLIQEAAPHLAE--GGSVILISSVAGYNPQGHLAMYGVTKTALFGLTK 553 INV A ++I+ P + + GGSV+++ SVAG+ L Y V+KTAL GLTK Sbjct: 121 SINVTATAMMIKAVVPEMEKRGGGSVVIVGSVAGFTRFPSLGPYNVSKTALLGLTK 176
>sp|Q13268|DHRS2_HUMAN Dehydrogenase/reductase SDR family member 2 OS=Homo sapiens GN=DHRS2 PE=1 SV=3 Length = 258
Score = 153 bits (386), Expect = 6e-37 Identities = 83/177 (46%), Positives = 117/177 (66%), Gaps = 3/177 (1%) Frame = +2
Query: 38 MAATEIPKR--IKGKVAVVTASTQGIGYAIARRLGLEGASVVISSRKQKNVDEAVQSLKE 211 M++T I ++ + +VAVVT ST GIG+AIARRL +GA VVISSRKQ+NVD A+ L+ Sbjct: 1 MSSTGIDRKGVLANRVAVVTGSTSGIGFAIARRLARDGAHVVISSRKQQNVDRAMAKLQG 60
Query: 212 LGIDVLGVACHVGNADHRKNLIKSAVDKFGRLDIFVSNAAVSPSTDPILTMSEGALDKLW 391 G+ V G+ CHVG A+ R+ L+ A++ G +D V +A V+P L SE DK+ Sbjct: 61 EGLSVAGIVCHVGKAEDREQLVAKALEHCGGVDFLVCSAGVNPLVGSTLGTSEQIWDKIL 120
Query: 392 DINVKAGVLLIQEAAPHLA-EGGSVILISSVAGYNPQGHLAMYGVTKTALFGLTKAL 559 +NVK+ LL+ + P++ G+VIL+SS+A YNP L +Y V+KTAL GLT+ L Sbjct: 121 SVNVKSPALLLSQLLPYMENRRGAVILVSSIAAYNPVVALGVYNVSKTALLGLTRTL 177
>sp|Q8VID1|DHRS4_RAT Dehydrogenase/reductase SDR family member 4 OS=Rattus norvegicus GN=Dhrs4 PE=2 SV=1 Length = 260
Score = 147 bits (370), Expect = 5e-35 Identities = 82/165 (49%), Positives = 111/165 (67%), Gaps = 2/165 (1%) Frame = +2
Query: 65 IKGKVAVVTASTQGIGYAIARRLGLEGASVVISSRKQKNVDEAVQSLKELGIDVLGVACH 244 + KVA+VTAST GIG AIARRL +GA VVISSRKQ+NVD AV +L+ G+ V GV CH Sbjct: 12 LANKVALVTASTDGIGLAIARRLAEDGAHVVISSRKQQNVDRAVATLQGEGLSVTGVVCH 71
Query: 245 VGNADHRKNLIKSAVDKFGRLDIFVSNAAVSPSTDPILTMSEGALDKLWDINVKAGVLLI 424 VG A+ R+ L+ A+ +DI VSNAAV+P ++ ++E +K+ INV A ++I Sbjct: 72 VGKAEDREKLVNMALKLHQGIDILVSNAAVNPFFGNLMDVTEEVWNKVLSINVTASAMMI 131
Query: 425 QEAAPHLAE--GGSVILISSVAGYNPQGHLAMYGVTKTALFGLTK 553 + P + + GGSV+++SSVAG+ L Y V+KTAL GLTK Sbjct: 132 KAVVPAMEKRGGGSVVIVSSVAGFVLFPSLGPYNVSKTALLGLTK 176
>sp|Q5HLD8|Y2049_STAEQ Uncharacterized oxidoreductase SERP2049 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=SERP2049 PE=3 SV=1 Length = 230
Score = 95.5 bits (236), Expect = 2e-19 Identities = 56/168 (33%), Positives = 100/168 (59%), Gaps = 2/168 (1%) Frame = +2
Query: 62 RIKGKVAVVTASTQGIGYAIARRLGLEGASVVISSRKQKNVDEAVQSLKELGIDVLGVAC 241 ++K KVAVVT ++ GIG AIA++L +GAS+V+ R ++ ++E Q +L V+ Sbjct: 3 KVKEKVAVVTGASSGIGEAIAKKLSQQGASIVLVGRNEQRLNEIAQ---QLNTPAKVVSA 59
Query: 242 HVGNADHRKNLIKSAVDKFGRLDIFVSNAAVSPSTDPILTMSEGALDKLWDINVKAGVLL 421 V + +++K+ +D FG +DI V++A S S+ I + D + D+N+K + + Sbjct: 60 DVTVKSNIDDMLKAVIDHFGHIDIVVNSAGQSLSS-KITDYNVEQWDTMIDVNIKGTLHV 118
Query: 422 IQEAAPHLAE--GGSVILISSVAGYNPQGHLAMYGVTKTALFGLTKAL 559 +Q P+L + G +I ++SV+G+ P A+YG TK A+ +T++L Sbjct: 119 LQATLPYLLKQSSGHIINLASVSGFEPTKTNAVYGATKAAIHAITQSL 166
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7R0Z8 |
Definition |
tr|A7R0Z8|A7R0Z8_VITVI Chromosome undetermined scaffold_332, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
170 |
Score (bit) |
239.0 |
E-value |
7.0e-62 |
Report |
|