DK957980 |
Clone id |
TST39A01NGRL0029_M21 |
Library |
TST39 |
Length |
614 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0029_M21. 5' end sequence. |
Accession |
DK957980 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL140Contig1 |
Sequence |
GCACAGAGCATTCGCCATAGCCGGAGGGCTCATCACTCTCCGTGCTCTGCTTTGCGCTAC ACACACAACACGCCTCGCGTTATTTCCCCAACAACCGCCCATTATCCGTCCCAGGCCTCC TCTTTCTTTTTTTAAGCCTGTTGCCGAGCTTAGCTTATCAGGTTCGCTAAGAAACTCCCC CGTTTCTGTTCCTGCATACGCGCACACACCATTTTCTTCTTTTCCTGGCACATCATTTCT GTCGATCTGTTGTTCTAGGCACCGCTTTGCTTTTCAGCTCACGATTTCTGTTAATCTCTT GTCCTGGGTACTGCCCTCTTCCCTGTCTGCAGAGTGTGGGCGCCTCTTGATAGAGCAGGA CCCCTTGTTGTCCCTGTTTGTGCGTGTGTATCTGCTGGTGCCGCCCATGGCTCAAGAAAG CTGGAACTGCGACACGGCAGAGGGAAGTGGGTGCCAGCAGCAAGAGGGCCTTGTGCTCTG CCCAAACAATTGCGGTTTTTTTGGCTGTGCCGCCACCATGAATCTCTGCTCTAAGTGCTA CAGAGAACTCACCTTGAAGAAGCAAGGGAGCCCCTCTGAGTTATCTATAATCACCTCTGC GTCCGCCACAACTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
A3BDI8 |
Definition |
sp|A3BDI8|SAP8_ORYSJ Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. japonica |
Align length |
51 |
Score (bit) |
68.6 |
E-value |
2.0e-11 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NKD1 |
Definition |
tr|A9NKD1|A9NKD1_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
67 |
Score (bit) |
77.8 |
E-value |
5.0e-13 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK957980|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0029_M21, 5' (614 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NKD1|A9NKD1_PICSI Putative uncharacterized protein OS=Picea... 78 5e-13 tr|A9NZK1|A9NZK1_PICSI Putative uncharacterized protein OS=Picea... 75 4e-12 tr|A9NK42|A9NK42_PICSI Putative uncharacterized protein OS=Picea... 75 4e-12 tr|A9NUS5|A9NUS5_PICSI Putative uncharacterized protein OS=Picea... 70 1e-10 tr|B7E4H0|B7E4H0_ORYSJ cDNA clone:006-301-C11, full insert seque... 69 3e-10 tr|A8QZ71|A8QZ71_MAIZE Putative uncharacterized protein OS=Zea m... 69 3e-10 tr|A3A445|A3A445_ORYSJ cDNA clone:001-042-A06, full insert seque... 69 3e-10 tr|A2X203|A2X203_ORYSI Putative uncharacterized protein OS=Oryza... 69 3e-10 tr|B6SN92|B6SN92_MAIZE Zinc finger A20 and AN1 domains-containin... 67 6e-10 tr|B4F8R6|B4F8R6_MAIZE Putative uncharacterized protein OS=Zea m... 67 6e-10 tr|A5BFH0|A5BFH0_VITVI Putative uncharacterized protein (Chromos... 67 8e-10 tr|B8LRP0|B8LRP0_PICSI Putative uncharacterized protein OS=Picea... 65 2e-09 tr|A9PJ34|A9PJ34_POPJC Putative uncharacterized protein OS=Popul... 65 2e-09 tr|A9PEQ1|A9PEQ1_POPTR Putative uncharacterized protein OS=Popul... 65 2e-09 tr|A7PPF9|A7PPF9_VITVI Chromosome chr8 scaffold_23, whole genome... 65 3e-09 tr|Q6R3I8|Q6R3I8_MAIZE Putative zinc finger protein ZmZf OS=Zea ... 64 5e-09 tr|Q3BCU2|Q3BCU2_MAIZE Zinc finger A20 and AN1 domains-containin... 64 5e-09 tr|B4FDQ8|B4FDQ8_MAIZE Putative uncharacterized protein OS=Zea m... 64 5e-09 tr|A1ECK5|A1ECK5_9ROSI Putative multiple stress-responsive zinc-... 63 1e-08 tr|B3IX31|B3IX31_LOTJA Transcription factor C2H2 OS=Lotus japoni... 62 2e-08 tr|A9NYV7|A9NYV7_PICSI Putative uncharacterized protein OS=Picea... 62 2e-08 tr|A9NK82|A9NK82_PICSI Putative uncharacterized protein OS=Picea... 62 2e-08 tr|A9S5V1|A9S5V1_PHYPA Predicted protein OS=Physcomitrella paten... 62 3e-08 tr|B8AL94|B8AL94_ORYSI Putative uncharacterized protein OS=Oryza... 62 3e-08 tr|A3ANI5|A3ANI5_ORYSJ Putative uncharacterized protein OS=Oryza... 62 3e-08 tr|A9TKL7|A9TKL7_PHYPA Predicted protein OS=Physcomitrella paten... 61 5e-08 tr|A9RR10|A9RR10_PHYPA Predicted protein OS=Physcomitrella paten... 61 6e-08 tr|A9P8S9|A9P8S9_POPTR Putative uncharacterized protein OS=Popul... 60 1e-07 tr|A2Q3D5|A2Q3D5_MEDTR Zinc finger, AN1-type; Zinc finger, A20-t... 60 1e-07 tr|A5C670|A5C670_VITVI Putative uncharacterized protein OS=Vitis... 59 2e-07
>tr|A9NKD1|A9NKD1_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 181
Score = 77.8 bits (190), Expect = 5e-13 Identities = 35/67 (52%), Positives = 47/67 (70%) Frame = +2
Query: 407 MAQESWNCDTAEGSGCQQQEGLVLCPNNCGFFGCAATMNLCSKCYRELTLKKQGSPSELS 586 M QE+WN A+G+GCQ EG LC NNCGFFG +AT NLCSKCYR+L +K+ + S ++ Sbjct: 1 MDQENWNIG-ADGTGCQAPEGHTLCANNCGFFGSSATRNLCSKCYRDLIMKEAQATSAMA 59
Query: 587 IITSASA 607 + + A Sbjct: 60 AVEKSFA 66
>tr|A9NZK1|A9NZK1_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 180
Score = 74.7 bits (182), Expect = 4e-12 Identities = 34/50 (68%), Positives = 38/50 (76%) Frame = +2
Query: 407 MAQESWNCDTAEGSGCQQQEGLVLCPNNCGFFGCAATMNLCSKCYRELTL 556 MAQESWN + E +GCQ EGL+ C NNCGFFG ATM+LCSKCYRE L Sbjct: 1 MAQESWNREKEE-TGCQVPEGLIRCANNCGFFGSPATMSLCSKCYREFVL 49
>tr|A9NK42|A9NK42_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 180
Score = 74.7 bits (182), Expect = 4e-12 Identities = 34/50 (68%), Positives = 38/50 (76%) Frame = +2
Query: 407 MAQESWNCDTAEGSGCQQQEGLVLCPNNCGFFGCAATMNLCSKCYRELTL 556 MAQESWN + E +GCQ EGL+ C NNCGFFG ATM+LCSKCYRE L Sbjct: 1 MAQESWNREKEE-TGCQVPEGLIRCANNCGFFGSPATMSLCSKCYREFVL 49
>tr|A9NUS5|A9NUS5_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 162
Score = 69.7 bits (169), Expect = 1e-10 Identities = 31/66 (46%), Positives = 48/66 (72%) Frame = +2
Query: 407 MAQESWNCDTAEGSGCQQQEGLVLCPNNCGFFGCAATMNLCSKCYRELTLKKQGSPSELS 586 MAQ++W D+ EG+G Q QE +LC N+CGFFG ++TMN CSKC+++L LK+ S + + Sbjct: 1 MAQDNWKGDS-EGTGYQPQEDPILCANSCGFFGSSSTMNFCSKCFKDLVLKQALSAAVVE 59
Query: 587 IITSAS 604 I + ++ Sbjct: 60 ISSGSA 65
>tr|B7E4H0|B7E4H0_ORYSJ cDNA clone:006-301-C11, full insert sequence OS=Oryza sativa subsp. japonica PE=2 SV=1 Length = 171
Score = 68.6 bits (166), Expect = 3e-10 Identities = 29/51 (56%), Positives = 39/51 (76%) Frame = +2
Query: 446 SGCQQQEGLVLCPNNCGFFGCAATMNLCSKCYRELTLKKQGSPSELSIITS 598 +GCQQ EG +LC NNCGFFG AATMN+CSKC++E+ +K++ + S I S Sbjct: 6 TGCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKQEQAKLAASSIDS 56
>tr|A8QZ71|A8QZ71_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 171
Score = 68.6 bits (166), Expect = 3e-10 Identities = 29/51 (56%), Positives = 39/51 (76%) Frame = +2
Query: 446 SGCQQQEGLVLCPNNCGFFGCAATMNLCSKCYRELTLKKQGSPSELSIITS 598 +GCQQ EG +LC NNCGFFG AATMN+CSKC++E+ +K++ + S I S Sbjct: 6 AGCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKQEQAQLAASSIDS 56
>tr|A3A445|A3A445_ORYSJ cDNA clone:001-042-A06, full insert sequence OS=Oryza sativa subsp. japonica GN=OsJ_005567 PE=2 SV=1 Length = 173
Score = 68.6 bits (166), Expect = 3e-10 Identities = 29/51 (56%), Positives = 39/51 (76%) Frame = +2
Query: 446 SGCQQQEGLVLCPNNCGFFGCAATMNLCSKCYRELTLKKQGSPSELSIITS 598 +GCQQ EG +LC NNCGFFG AATMN+CSKC++E+ +K++ + S I S Sbjct: 6 AGCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKEEQAKLAASSIDS 56
>tr|A2X203|A2X203_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_06227 PE=4 SV=1 Length = 173
Score = 68.6 bits (166), Expect = 3e-10 Identities = 29/51 (56%), Positives = 39/51 (76%) Frame = +2
Query: 446 SGCQQQEGLVLCPNNCGFFGCAATMNLCSKCYRELTLKKQGSPSELSIITS 598 +GCQQ EG +LC NNCGFFG AATMN+CSKC++E+ +K++ + S I S Sbjct: 6 AGCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKEEQAKLAASSIDS 56
>tr|B6SN92|B6SN92_MAIZE Zinc finger A20 and AN1 domains-containing protein OS=Zea mays PE=2 SV=1 Length = 171
Score = 67.4 bits (163), Expect = 6e-10 Identities = 29/51 (56%), Positives = 38/51 (74%) Frame = +2
Query: 446 SGCQQQEGLVLCPNNCGFFGCAATMNLCSKCYRELTLKKQGSPSELSIITS 598 +GCQQ EG +LC NNCGFFG AATMN+CSKC++E+ K++ + S I S Sbjct: 6 AGCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMITKQEQAQLAASSIDS 56
>tr|B4F8R6|B4F8R6_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 171
Score = 67.4 bits (163), Expect = 6e-10 Identities = 29/51 (56%), Positives = 38/51 (74%) Frame = +2
Query: 446 SGCQQQEGLVLCPNNCGFFGCAATMNLCSKCYRELTLKKQGSPSELSIITS 598 +GCQQ EG +LC NNCGFFG AATMN+CSKC++E+ K++ + S I S Sbjct: 6 AGCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMITKQEQAQLAASSIDS 56
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