DK957991
Clone id TST39A01NGRL0029_N08
Library
Length 437
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0029_N08. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
AGATAACGTGCATGCTGGTGATAGTGATGGTGATGCTGGTGGCATACATGAGCAGCGTTG
CTAATGCTGAGGTGGAGGAAGTGGGGCGTAAATTAGTGGCTGGGGCAGGGGCAGAATCAG
GTGAGGAGGCCGAGTTGTGGGCCAAGAAAGGTCATTACCCTTACAAGAAAGGGTACAAGA
AGGGCGGCTACCACCACAAGAAGGGCGGCGGCTACGGCAAGGGTCCGGGCCACCCTCACT
AACTCAAGGCAGCTGCTTCGTCCGAGCGCGTCTTCTGTCCGATTCTTGGGTTTATCCACC
CCAGACGCGCGTTCCTTGTGAAATAAATAATACGGTGTCAGCACTGAAGTGTTAAAATTG
TCTTTGTTGTTGCAACCTGTGTACCTTATGGGAATTCATTTGCTGGTTTAACTTTAAAAA
AAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q54F40
Definition sp|Q54F40|Y1133_DICDI Probable serine/threonine-protein kinase DDB_G0291133 OS=Dictyostelium discoideum
Align length 21
Score (bit) 29.6
E-value 4.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK957991|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0029_N08, 5'
(415 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q54F40|Y1133_DICDI Probable serine/threonine-protein kinase D... 30 4.9
sp|Q6ZS49|YQ050_HUMAN Putative uncharacterized protein FLJ45831 ... 29 6.5
sp|Q6PW23|MX_EPICO Interferon-induced GTP-binding protein Mx OS=... 29 8.4
sp|Q9BYH8|IKBZ_HUMAN NF-kappa-B inhibitor zeta OS=Homo sapiens G... 29 8.4

>sp|Q54F40|Y1133_DICDI Probable serine/threonine-protein kinase
DDB_G0291133 OS=Dictyostelium discoideum GN=DDB_G0291133
PE=3 SV=1
Length = 778

Score = 29.6 bits (65), Expect = 4.9
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = -3

Query: 371 NNKDNFNTSVLTPYYLFHKER 309
NN +N+N ++TPY+ + KER
Sbjct: 510 NNINNYNLKLITPYFQYQKER 530


>sp|Q6ZS49|YQ050_HUMAN Putative uncharacterized protein FLJ45831
OS=Homo sapiens PE=5 SV=1
Length = 121

Score = 29.3 bits (64), Expect = 6.5
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = -3

Query: 353 NTSVLTPYYLFHKERASGVDKPK 285
N S L PYYLFH+ R GVD K
Sbjct: 69 NASKLMPYYLFHRSR--GVDNSK 89


>sp|Q6PW23|MX_EPICO Interferon-induced GTP-binding protein Mx
OS=Epinephelus coioides GN=mx PE=2 SV=1
Length = 626

Score = 28.9 bits (63), Expect = 8.4
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = +2

Query: 146 ERSLPLQERVQEGRLPPQEGRRLRQGSGPPS 238
ERSLP E E +L + R GSGPPS
Sbjct: 299 ERSLPRLEEQIEDKLEQTQAELERYGSGPPS 329


>sp|Q9BYH8|IKBZ_HUMAN NF-kappa-B inhibitor zeta OS=Homo sapiens
GN=NFKBIZ PE=1 SV=1
Length = 718

Score = 28.9 bits (63), Expect = 8.4
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2

Query: 227 GPPSLTQGSCFVRARLLSDSWVYPPQTRVPCE 322
GP SL+ G R LL ++ PPQT P E
Sbjct: 167 GPDSLSDGPACKRPALLHSQFLTPPQTPTPGE 198


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK957991|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0029_N08, 5'
(415 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******