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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK958020
Clone id TST39A01NGRL0029_O13
Library
Length 644
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0029_O13. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GGCGAACGTGCTTCTCTCTCATCTTTCAAGCTGTAGCCATGTATGGAAGCCCGCTCCTAC
CAATCCTCACCTCTTCTAAGAAAGCGTCCTCCTCGGATCAGCAGGCTGCAGAGCTTCTCG
CTGTGGATGACCTTCTTGACAACCCGTGGCACTATGATTGCGTTGTCAGCCCCAGACTGA
TAAGCTCTGATTTAGCCCCTAAATCACCAGTTTTTCTCTCTAAGCGCTCTGCGCCGGCAG
CCTACAGTCGCCCATTATCACCACCTCTCTCTGGCCGTAAGCCATCAGCCAATCCCCCAT
TAACACCGCCTCCTCTCTCTAAATCATCAGCCAATCGCCGGCCACTATCACCGCTTTCTC
TCGCTAGATCACCAACCAATTACCCATCTTCGACTCTCTCTAAGCCGGCCGCCTGCAACC
CATCATCGTCGTCTTCTTCATCAAAACCTATCAACAGAATATTGATTACGCAGGCAAGCT
CTAATTACGTCAGCTTGGCAAGCTTCATCAATAACGGCGATAAATCCAGCTACGGAAGCT
CGACTGCAGCAACCTTAGATTTCTCGAGTAAGCGAAGCAGCAAGTCAATCACGCCTGTGT
TATCCAAGTGTAGAGAGAGAGAAGCAAAAACCCACATCCGTGGC
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK958020|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0029_O13, 5'
         (644 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done

 ***** No hits found ******
tr_hit_id B4MFI0
Definition tr|B4MFI0|B4MFI0_DROVI GJ15053 OS=Drosophila virilis
Align length 96
Score (bit) 40.8
E-value 0.072
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK958020|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0029_O13, 5'
         (644 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B4MFI0|B4MFI0_DROVI GJ15053 OS=Drosophila virilis GN=GJ15053 ...    41   0.072
tr|A7RP56|A7RP56_NEMVE Predicted protein (Fragment) OS=Nematoste...    38   0.46 
tr|Q6G244|Q6G244_BARHE Putative uncharacterized protein OS=Barto...    38   0.61 
tr|Q4SWU2|Q4SWU2_TETNG Chromosome undetermined SCAF13514, whole ...    37   0.79 
tr|B6MYU8|B6MYU8_BRAFL Putative uncharacterized protein OS=Branc...    37   1.4  
tr|A7SDS3|A7SDS3_NEMVE Predicted protein (Fragment) OS=Nematoste...    36   2.3  
tr|A6QZG2|A6QZG2_AJECN Predicted protein OS=Ajellomyces capsulat...    36   2.3  
tr|A1YL96|A1YL96_GOSHI Proline-rich protein OS=Gossypium hirsutu...    35   3.0  
tr|B4G9Q0|B4G9Q0_DROPE GL19523 OS=Drosophila persimilis GN=GL195...    35   3.0  
tr|B6PPL3|B6PPL3_BRAFL Putative uncharacterized protein (Fragmen...    35   3.9  
tr|B4LZG8|B4LZG8_DROVI GJ23266 OS=Drosophila virilis GN=GJ23266 ...    35   3.9  
tr|A7T4B5|A7T4B5_NEMVE Predicted protein (Fragment) OS=Nematoste...    35   3.9  
tr|A7T4B6|A7T4B6_NEMVE Predicted protein (Fragment) OS=Nematoste...    35   5.1  
tr|A8Q6L1|A8Q6L1_MALGO Putative uncharacterized protein OS=Malas...    35   5.1  
tr|A7SL78|A7SL78_NEMVE Predicted protein OS=Nematostella vectens...    34   6.7  
tr|A9V6Q5|A9V6Q5_MONBE Predicted protein OS=Monosiga brevicollis...    34   8.8  

>tr|B4MFI0|B4MFI0_DROVI GJ15053 OS=Drosophila virilis GN=GJ15053
           PE=4 SV=1
          Length = 496

 Score = 40.8 bits (94), Expect = 0.072
 Identities = 28/96 (29%), Positives = 38/96 (39%)
 Frame = +1

Query: 148 GTMIALSAPD**ALI*PLNHQFFSLSALRRQPTVAHYHHLSLAVSHQPIPH*HRLLSLNH 327
           G  +A SA D      PL+H     S     P   H+HHL+  +   P  H H    L  
Sbjct: 393 GGTLASSARDVGVGYEPLHHASHLASHHHSHPHTHHHHHLAAGLHAPPYSHTHHQQQLQQ 452

Query: 328 QPIAGHYHRFLSLDHQPITHLRLSLSRPPATHHRRL 435
           Q    H+H      H P + L L   + P  H R++
Sbjct: 453 QQQQHHHHH-----HLPYSKLDLDYPKLPQEHKRQV 483


>tr|A7RP56|A7RP56_NEMVE Predicted protein (Fragment) OS=Nematostella
           vectensis GN=v1g88459 PE=3 SV=1
          Length = 1478

 Score = 38.1 bits (87), Expect = 0.46
 Identities = 36/162 (22%), Positives = 66/162 (40%), Gaps = 21/162 (12%)
 Frame = +1

Query: 211 FFSLSALRRQPTVAHYHHLSLA--------VSHQPIPH*HRLLSLNHQPIAGHYHRFLSL 366
           F+ L+ +     ++++H ++L         V+H P+        + H P+   +     +
Sbjct: 310 FYLLNLVLAVVYMSYHHEMNLTDNEVTQSQVTHSPVTQ----SQVTHSPVTQSW-----V 360

Query: 367 DHQPITHLRLSLSRPPATHHRRLLHQNLSTEY*LRRQALITSAWQASSITAINPATEARL 546
            H P+T  R+S SR                      Q+L+T +W   S+   +P TE+R+
Sbjct: 361 THSPVTQSRVSQSRVT--------------------QSLVTQSWLMQSLVTQSPVTESRV 400

Query: 547 QQP*ISRVSEAAS-------------QSRLCYPSVEREKQKP 633
            Q   SRV+++ +             +S L  P  E E+ KP
Sbjct: 401 SQ---SRVTQSRAHPKTDTIQVLEPLESHLYPPDEEEEETKP 439


>tr|Q6G244|Q6G244_BARHE Putative uncharacterized protein
           OS=Bartonella henselae GN=BH14220 PE=4 SV=1
          Length = 257

 Score = 37.7 bits (86), Expect = 0.61
 Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
 Frame = +1

Query: 262 HLSLAVSHQPIPH*HRLLSLNHQPIAGHYHRFLSLDHQP--ITHLRLSLSRPPATHHRRL 435
           HLS ++SH P    H   S++H P +   H   S+ H P  I HL  S+S PP+     +
Sbjct: 96  HLSSSISHPPSLILHLSSSISHPP-SLILHLSSSISHPPSLILHLSSSISHPPSL----I 150

Query: 436 LHQNLSTEY 462
           LH +LST +
Sbjct: 151 LHLSLSTSH 159


>tr|Q4SWU2|Q4SWU2_TETNG Chromosome undetermined SCAF13514, whole
           genome shotgun sequence. (Fragment) OS=Tetraodon
           nigroviridis GN=GSTENG00011295001 PE=3 SV=1
          Length = 468

 Score = 37.4 bits (85), Expect = 0.79
 Identities = 26/94 (27%), Positives = 50/94 (53%), Gaps = 7/94 (7%)
 Frame = +1

Query: 199 LNHQFFSLSALRRQP----TVAHYHHLSLAVSHQPIPH*HRLLSLNHQPIAGHYHRFLSL 366
           ++HQ  S   + +QP    +V+H      +VSHQ + H     S++ QP++       S+
Sbjct: 372 VSHQSVSHQPVSQQPVSHQSVSHQSVSQQSVSHQSVSH----QSVSQQPVSHQSVSHQSV 427

Query: 367 DHQPITHLRL---SLSRPPATHHRRLLHQNLSTE 459
             QP++H  +   S+S+ P + H+ + HQ++S +
Sbjct: 428 SQQPVSHQSVSHQSVSQQPVS-HQSVSHQSVSQQ 460


>tr|B6MYU8|B6MYU8_BRAFL Putative uncharacterized protein
           OS=Branchiostoma floridae GN=BRAFLDRAFT_88479 PE=4 SV=1
          Length = 525

 Score = 36.6 bits (83), Expect = 1.4
 Identities = 15/45 (33%), Positives = 27/45 (60%)
 Frame = +1

Query: 253 HYHHLSLAVSHQPIPH*HRLLSLNHQPIAGHYHRFLSLDHQPITH 387
           ++ H  +   HQP+ H H+ ++  HQP+  H H+ ++  HQP+ H
Sbjct: 215 NHGHQPVNHGHQPVNHGHQPVNQGHQPV-NHGHQPVNHGHQPVNH 258



 Score = 36.6 bits (83), Expect = 1.4
 Identities = 20/64 (31%), Positives = 35/64 (54%)
 Frame = +1

Query: 196 PLNHQFFSLSALRRQPTVAHYHHLSLAVSHQPIPH*HRLLSLNHQPIAGHYHRFLSLDHQ 375
           P+NH    ++    QP   ++ H  +   HQP+ H H+ ++  HQP+  H H+ ++  HQ
Sbjct: 227 PVNHGHQPVNQ-GHQPV--NHGHQPVNHGHQPVNHGHQPVNHGHQPV-NHGHQPVNHGHQ 282

Query: 376 PITH 387
           P+ H
Sbjct: 283 PVNH 286


>tr|A7SDS3|A7SDS3_NEMVE Predicted protein (Fragment) OS=Nematostella
           vectensis GN=v1g24399 PE=4 SV=1
          Length = 115

 Score = 35.8 bits (81), Expect = 2.3
 Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
 Frame = +1

Query: 262 HLSLAVSHQPIPH*HRLLSLNHQPIAGHYHRFLSL--DHQPITH 387
           +L+L V+H P+ H +R  S     +  H HR+L+L   H P++H
Sbjct: 9   YLTLTVTHPPVSHTYRHTSAGIPHLPSHIHRYLTLTVTHPPVSH 52


>tr|A6QZG2|A6QZG2_AJECN Predicted protein OS=Ajellomyces capsulata
           (strain NAm1 / WU24) GN=HCAG_02769 PE=4 SV=1
          Length = 398

 Score = 35.8 bits (81), Expect = 2.3
 Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
 Frame = +1

Query: 304 HRLLSLNHQPIAGHYHRFLSLDHQP-ITHLRLSLSRPPATHHRRLL 438
           HR ++ NH  +A  ++R  S  H P + +L L  S+PP ++H R L
Sbjct: 29  HRRMADNHGVVANPWNRHASRQHSPTLANLSLGSSKPPGSNHSRAL 74


>tr|A1YL96|A1YL96_GOSHI Proline-rich protein OS=Gossypium hirsutum
           GN=PRPL PE=2 SV=1
          Length = 164

 Score = 35.4 bits (80), Expect = 3.0
 Identities = 28/70 (40%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
 Frame = +1

Query: 199 LNHQFFSLSALRRQPTVAHYHHL----SLAVSHQPIPH*H-RLLSLNHQPIAGHYHRFLS 363
           L+HQF  L   R       Y +L    SL++SHQ I H   R LS NHQ +     + L+
Sbjct: 18  LSHQFIHLQRKRSLNPNHQYMNLQRRKSLSLSHQFIHHQRKRSLSPNHQYMNPQRRKSLN 77

Query: 364 LDHQPITHLR 393
           L HQ I H R
Sbjct: 78  LSHQFIHHQR 87


>tr|B4G9Q0|B4G9Q0_DROPE GL19523 OS=Drosophila persimilis GN=GL19523
            PE=4 SV=1
          Length = 1043

 Score = 35.4 bits (80), Expect = 3.0
 Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 2/89 (2%)
 Frame = +1

Query: 235  RQPTVAHYHHLSLAVSHQPIPH*HRLLSLNHQPIAGHYHRFLSLDHQPITHLRLSLSRPP 414
            R+P+  HYHH   +  H+   H H  +  +H     H+H   S    P  H      R P
Sbjct: 954  REPSRRHYHHHHQSEQHEHHQHQHLHMHHHHH----HHHSTSSSQQPPHQHQHPHNQRQP 1009

Query: 415  ATHHRRLLHQNLSTEY*L--RRQALITSA 495
              HH+ L H +  ++  L   R+A+  S+
Sbjct: 1010 -HHHQHLHHHHQHSQQPLWHHRKAIFQSS 1037


>tr|B6PPL3|B6PPL3_BRAFL Putative uncharacterized protein (Fragment)
           OS=Branchiostoma floridae GN=BRAFLDRAFT_254484 PE=4 SV=1
          Length = 174

 Score = 35.0 bits (79), Expect = 3.9
 Identities = 18/66 (27%), Positives = 29/66 (43%)
 Frame = +1

Query: 217 SLSALRRQPTVAHYHHLSLAVSHQPIPH*HRLLSLNHQPIAGHYHRFLSLDHQPITHLRL 396
           S+  +   P  A + H+ L+ +H P+ H H   +      A   H  LS  H P+ H+ L
Sbjct: 76  SVQPMHLSPAHALFQHMHLSPAHAPVQHMHLSSTCTCPAHAPVQHMHLSPAHAPVQHMHL 135

Query: 397 SLSRPP 414
             +  P
Sbjct: 136 CPAHAP 141