DK958029 |
Clone id |
TST39A01NGRL0029_O22 |
Library |
TST39 |
Length |
640 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0029_O22. 5' end sequence. |
Accession |
DK958029 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL261Contig1 |
Sequence |
GGAGACTCCAAAATTACTGCAGAATGTCCTCTCTCTTTCCTATGATATAAGACACAAAAG AGACAAAGTAGCTGCGGAGCGAATTAAACAGAAGGAGGTCTATGAGCACGAGAAGGAGCA AGTTTTGCTAGCAGAAAATGTAGTCCTTCAAACTTTGGGTTTTGAGCTCAATGTCATCCA TCCGTACAAGCGTTTGGTAGCAGCTGTTAAGAAGCTCAAAGTTACAGAGAAATCTTTGGC TCAAGTTGCTTGGAATTTCTTAAATGATGCGTTGAGGACATCGCTATGCCTGCAGTATGA GGCTCATTATATTGCAGCTGGGGGCATTTTCCTTGCAGCAAAGTTTCTGAAAATGAAGCT GCCAACCGACTGCGAAAAGCCCTGGTGGCAAGAGCTGGAGGTTACTGCCCGGCAATTAGA AGATGTGAGTAATCAGATGCTGGAATTGTATGAGCATCACCGGGATTCAACTCCTAGTCC TAGCGGTATTACAGGAAGCGTGGTCCCCCCCCAGGCCCCTCCTGCCACACCCCAAGTGAC AGTGAAAAGGAACACCAAGCTGAGAGAGAAGGAAGCCGACTGCGACTGCTCAAGTATACA GGGTAATGTCTCAAGTATACATGCGTCGAAATCCCCCTAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q2RAC5 |
Definition |
sp|Q2RAC5|CCT13_ORYSJ Cyclin-T1-3 OS=Oryza sativa subsp. japonica |
Align length |
162 |
Score (bit) |
207.0 |
E-value |
5.0e-53 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8BJ73 |
Definition |
tr|B8BJ73|B8BJ73_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica |
Align length |
162 |
Score (bit) |
207.0 |
E-value |
6.0e-52 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK958029|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0029_O22, 5' (640 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8BJ73|B8BJ73_ORYSI Putative uncharacterized protein OS=Oryza... 207 6e-52 tr|B7EPW6|B7EPW6_ORYSJ cDNA clone:J013153K21, full insert sequen... 204 4e-51 tr|A3CHD6|A3CHD6_ORYSJ Putative uncharacterized protein OS=Oryza... 204 4e-51 tr|A7QD89|A7QD89_VITVI Chromosome undetermined scaffold_80, whol... 203 6e-51 tr|B7FLS8|B7FLS8_MEDTR Putative uncharacterized protein OS=Medic... 202 2e-50 tr|A9TMA9|A9TMA9_PHYPA Predicted protein (Fragment) OS=Physcomit... 195 2e-48 tr|A3C8T7|A3C8T7_ORYSJ Putative uncharacterized protein OS=Oryza... 192 1e-47 tr|B7FL84|B7FL84_MEDTR Putative uncharacterized protein OS=Medic... 179 1e-43 tr|A9SK15|A9SK15_PHYPA Predicted protein (Fragment) OS=Physcomit... 173 7e-42 tr|A7QCS7|A7QCS7_VITVI Chromosome undetermined scaffold_79, whol... 167 4e-40 tr|A9SUA9|A9SUA9_PHYPA Predicted protein (Fragment) OS=Physcomit... 156 1e-36 tr|A5B2H4|A5B2H4_VITVI Putative uncharacterized protein OS=Vitis... 155 2e-36 tr|A7NT76|A7NT76_VITVI Chromosome chr18 scaffold_1, whole genome... 147 4e-34 tr|A5C1E2|A5C1E2_VITVI Putative uncharacterized protein OS=Vitis... 147 4e-34 tr|B6SH69|B6SH69_MAIZE Cyclin-dependent protein kinase OS=Zea ma... 137 6e-31 tr|B8AH65|B8AH65_ORYSI Putative uncharacterized protein OS=Oryza... 132 1e-29 tr|B7F0D1|B7F0D1_ORYSJ cDNA clone:002-129-H05, full insert seque... 132 1e-29 tr|B8AH26|B8AH26_ORYSI Putative uncharacterized protein OS=Oryza... 129 2e-28 tr|A3A6C4|A3A6C4_ORYSJ Putative uncharacterized protein OS=Oryza... 128 3e-28 tr|Q54LJ0|Q54LJ0_DICDI Cyclin OS=Dictyostelium discoideum GN=cyc... 120 9e-26 tr|Q01EB0|Q01EB0_OSTTA CycK CycK-related cyclin family protein (... 114 5e-24 tr|A4RSP3|A4RSP3_OSTLU CycK-related cyclin family protein OS=Ost... 114 7e-24 tr|Q6EEW1|Q6EEW1_MEDTR Cyclin T1 OS=Medicago truncatula PE=2 SV=1 100 1e-19 tr|A9SI06|A9SI06_PHYPA Predicted protein OS=Physcomitrella paten... 98 4e-19 tr|A9SUB1|A9SUB1_PHYPA Predicted protein OS=Physcomitrella paten... 96 1e-18 tr|A7NWJ7|A7NWJ7_VITVI Chromosome chr5 scaffold_2, whole genome ... 94 7e-18 tr|B6UF70|B6UF70_MAIZE Putative uncharacterized protein OS=Zea m... 91 6e-17 tr|A8I762|A8I762_CHLRE L-type cyclin (Fragment) OS=Chlamydomonas... 91 8e-17 tr|B6NWU7|B6NWU7_BRAFL Putative uncharacterized protein OS=Branc... 89 3e-16 tr|B6NH25|B6NH25_BRAFL Putative uncharacterized protein OS=Branc... 88 5e-16
>tr|B8BJ73|B8BJ73_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_35185 PE=4 SV=1 Length = 490
Score = 207 bits (526), Expect = 6e-52 Identities = 101/162 (62%), Positives = 124/162 (76%) Frame = +2
Query: 2 ETPKLLQNVLSLSYDIRHKRDKVAAERIKQKEVYEHEKEQVLLAENVVLQTLGFELNVIH 181 ETP+ L++V+ +SY+I HK+D A +RIKQKEVYE +KE +LL E VVL TLGF+LNV H Sbjct: 122 ETPRPLKDVILISYEIIHKKDAAAVQRIKQKEVYEQQKELILLGERVVLVTLGFDLNVHH 181
Query: 182 PYKRXXXXXXXXXXTEKSLAQVAWNFLNDALRTSLCLQYEAHYIAAGGIFLAAKFLKMKL 361 PYK + +LAQVAWNF+ND LRTSLCLQ++ H+IAAG IFLAAKFLK+KL Sbjct: 182 PYKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKL 241
Query: 362 PTDCEKPWWQELEVTARQLEDVSNQMLELYEHHRDSTPSPSG 487 P+D EK WWQE +VT RQLE+VSNQMLELYE +R + P G Sbjct: 242 PSDGEKVWWQEFDVTPRQLEEVSNQMLELYEQNRVAPPPSQG 283
>tr|B7EPW6|B7EPW6_ORYSJ cDNA clone:J013153K21, full insert sequence OS=Oryza sativa subsp. japonica PE=2 SV=1 Length = 543
Score = 204 bits (519), Expect = 4e-51 Identities = 100/161 (62%), Positives = 124/161 (77%) Frame = +2
Query: 2 ETPKLLQNVLSLSYDIRHKRDKVAAERIKQKEVYEHEKEQVLLAENVVLQTLGFELNVIH 181 ETP+ L++V+ +SY+I HK+D A +RIKQKEVY+ +KE +LLAE VVL TLGF+LNV H Sbjct: 121 ETPRPLKDVILVSYEIIHKKDPAAGQRIKQKEVYDQQKELILLAERVVLATLGFDLNVHH 180
Query: 182 PYKRXXXXXXXXXXTEKSLAQVAWNFLNDALRTSLCLQYEAHYIAAGGIFLAAKFLKMKL 361 PYK + +LAQVAWNF+ND LRTSLCLQ++ H+IAAG IFLAAKFLK+KL Sbjct: 181 PYKPLVEAIRKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKL 240
Query: 362 PTDCEKPWWQELEVTARQLEDVSNQMLELYEHHRDSTPSPS 484 P+D EK WWQE +VT RQLE+VSNQMLELYE + + PS Sbjct: 241 PSDGEKVWWQEFDVTPRQLEEVSNQMLELYEQNCAAQAQPS 281
>tr|A3CHD6|A3CHD6_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_034708 PE=3 SV=1 Length = 683
Score = 204 bits (519), Expect = 4e-51 Identities = 100/161 (62%), Positives = 124/161 (77%) Frame = +2
Query: 2 ETPKLLQNVLSLSYDIRHKRDKVAAERIKQKEVYEHEKEQVLLAENVVLQTLGFELNVIH 181 ETP+ L++V+ +SY+I HK+D A +RIKQKEVY+ +KE +LLAE VVL TLGF+LNV H Sbjct: 149 ETPRPLKDVILVSYEIIHKKDPAAGQRIKQKEVYDQQKELILLAERVVLATLGFDLNVHH 208
Query: 182 PYKRXXXXXXXXXXTEKSLAQVAWNFLNDALRTSLCLQYEAHYIAAGGIFLAAKFLKMKL 361 PYK + +LAQVAWNF+ND LRTSLCLQ++ H+IAAG IFLAAKFLK+KL Sbjct: 209 PYKPLVEAIRKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKL 268
Query: 362 PTDCEKPWWQELEVTARQLEDVSNQMLELYEHHRDSTPSPS 484 P+D EK WWQE +VT RQLE+VSNQMLELYE + + PS Sbjct: 269 PSDGEKVWWQEFDVTPRQLEEVSNQMLELYEQNCAAQAQPS 309
>tr|A7QD89|A7QD89_VITVI Chromosome undetermined scaffold_80, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00035737001 PE=3 SV=1 Length = 523
Score = 203 bits (517), Expect = 6e-51 Identities = 101/166 (60%), Positives = 125/166 (75%) Frame = +2
Query: 2 ETPKLLQNVLSLSYDIRHKRDKVAAERIKQKEVYEHEKEQVLLAENVVLQTLGFELNVIH 181 ETP+ L++V+ +SY+I +K+D A +RIKQKEVYE +KE +LL E VVL TLGF+LNV H Sbjct: 118 ETPRPLKDVILVSYEIINKKDPAAVQRIKQKEVYEQQKELILLGERVVLATLGFDLNVHH 177
Query: 182 PYKRXXXXXXXXXXTEKSLAQVAWNFLNDALRTSLCLQYEAHYIAAGGIFLAAKFLKMKL 361 PYK + +LAQVAWNF+ND LRTSLCLQ++ H+IAAG IFLAAKFLK+KL Sbjct: 178 PYKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKL 237
Query: 362 PTDCEKPWWQELEVTARQLEDVSNQMLELYEHHRDSTPSPSGITGS 499 P+D EK WWQE +VT RQLE+VSNQMLELYE +R S + GS Sbjct: 238 PSDGEKVWWQEFDVTPRQLEEVSNQMLELYEQNRVPPSQGSEVEGS 283
>tr|B7FLS8|B7FLS8_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 395
Score = 202 bits (513), Expect = 2e-50 Identities = 98/154 (63%), Positives = 121/154 (78%) Frame = +2
Query: 2 ETPKLLQNVLSLSYDIRHKRDKVAAERIKQKEVYEHEKEQVLLAENVVLQTLGFELNVIH 181 ETP+ L++V+ +SY++ HK+D AA+RIKQKEVYE +KE +LL E VVL TL F+LNV H Sbjct: 119 ETPRPLKDVILISYEMIHKKDPAAAQRIKQKEVYEQQKELILLGERVVLATLAFDLNVQH 178
Query: 182 PYKRXXXXXXXXXXTEKSLAQVAWNFLNDALRTSLCLQYEAHYIAAGGIFLAAKFLKMKL 361 PYK + +LAQVAWNF+ND LRTSLCLQ++ H+IAAG IFLAAKFLK+KL Sbjct: 179 PYKPLVEAIKKFNVAKNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKL 238
Query: 362 PTDCEKPWWQELEVTARQLEDVSNQMLELYEHHR 463 P+D EK WWQE +VT RQLE+VSNQMLELYE +R Sbjct: 239 PSDGEKVWWQEFDVTPRQLEEVSNQMLELYEQNR 272
>tr|A9TMA9|A9TMA9_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_42949 PE=3 SV=1 Length = 406
Score = 195 bits (495), Expect = 2e-48 Identities = 94/161 (58%), Positives = 121/161 (75%) Frame = +2
Query: 2 ETPKLLQNVLSLSYDIRHKRDKVAAERIKQKEVYEHEKEQVLLAENVVLQTLGFELNVIH 181 ETP+ L+ V+ SY+IR K+D +A +RI+QK+VYE +KE VL E ++L TLGF+LNV H Sbjct: 88 ETPRPLREVIMFSYEIRFKKDPIAVQRIRQKDVYEDQKELVLGGERLLLTTLGFDLNVHH 147
Query: 182 PYKRXXXXXXXXXXTEKSLAQVAWNFLNDALRTSLCLQYEAHYIAAGGIFLAAKFLKMKL 361 PYK + +LAQVAWNF+ND LRTSLCLQ++ H+IAAG IFLAAKFLK+ L Sbjct: 148 PYKPLVAAIKKFKVAQNTLAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVNL 207
Query: 362 PTDCEKPWWQELEVTARQLEDVSNQMLELYEHHRDSTPSPS 484 P D +K WWQ+ EVT RQLE+VSNQMLELYE ++ + P+ S Sbjct: 208 PKDGDKVWWQQFEVTPRQLEEVSNQMLELYEQNKSNGPTGS 248
>tr|A3C8T7|A3C8T7_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_031709 PE=3 SV=1 Length = 495
Score = 192 bits (488), Expect = 1e-47 Identities = 98/167 (58%), Positives = 121/167 (72%), Gaps = 5/167 (2%) Frame = +2
Query: 2 ETPKLLQNVLSLSYDIRHKRDKVAAERIKQKE-----VYEHEKEQVLLAENVVLQTLGFE 166 ETP+ L++V+ +SY+I HK+D A +RIKQK V +KE +LL E VVL TLGF+ Sbjct: 122 ETPRPLKDVILISYEIIHKKDAAAVQRIKQKSLDYFGVEWQQKELILLGERVVLVTLGFD 181
Query: 167 LNVIHPYKRXXXXXXXXXXTEKSLAQVAWNFLNDALRTSLCLQYEAHYIAAGGIFLAAKF 346 LNV HPYK + +LAQVAWNF+ND LRTSLCLQ++ H+IAAG IFLAAKF Sbjct: 182 LNVHHPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKF 241
Query: 347 LKMKLPTDCEKPWWQELEVTARQLEDVSNQMLELYEHHRDSTPSPSG 487 LK+KLP+D EK WWQE +VT RQLE+VSNQMLELYE +R + P G Sbjct: 242 LKVKLPSDGEKVWWQEFDVTPRQLEEVSNQMLELYEQNRVAPPPSQG 288
>tr|B7FL84|B7FL84_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 265
Score = 179 bits (455), Expect = 1e-43 Identities = 87/140 (62%), Positives = 108/140 (77%) Frame = +2
Query: 2 ETPKLLQNVLSLSYDIRHKRDKVAAERIKQKEVYEHEKEQVLLAENVVLQTLGFELNVIH 181 ETP+ L++V+ +SY+I +K+D A +RIKQKEVYE +KE +LLAE VVL TLGF+ NV H Sbjct: 118 ETPRPLKDVIMVSYEIINKKDPTAVQRIKQKEVYEQQKELILLAERVVLATLGFDFNVHH 177
Query: 182 PYKRXXXXXXXXXXTEKSLAQVAWNFLNDALRTSLCLQYEAHYIAAGGIFLAAKFLKMKL 361 PYK + +LAQVAWNF+ND LRTSLCLQ++ H+IAAG IFLAAKFLK+KL Sbjct: 178 PYKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKL 237
Query: 362 PTDCEKPWWQELEVTARQLE 421 P+D EK WWQE +VT RQLE Sbjct: 238 PSDGEKVWWQEFDVTPRQLE 257
>tr|A9SK15|A9SK15_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_17473 PE=3 SV=1 Length = 230
Score = 173 bits (439), Expect = 7e-42 Identities = 89/153 (58%), Positives = 108/153 (70%) Frame = +2
Query: 2 ETPKLLQNVLSLSYDIRHKRDKVAAERIKQKEVYEHEKEQVLLAENVVLQTLGFELNVIH 181 ETP+ L+ V+ SY IR K+D +A ERIKQK VL E +VL TLGF+LN+ H Sbjct: 86 ETPRPLREVIVFSYHIRFKKDPLAKERIKQK--------LVLAGERLVLTTLGFDLNIHH 137
Query: 182 PYKRXXXXXXXXXXTEKSLAQVAWNFLNDALRTSLCLQYEAHYIAAGGIFLAAKFLKMKL 361 PYK + +LAQVAWNF+ND LRTSLCLQ++ H+IAAG IFLAAKFLK+ L Sbjct: 138 PYKPLVAAIKRFKVAQNTLAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVNL 197
Query: 362 PTDCEKPWWQELEVTARQLEDVSNQMLELYEHH 460 P + +K WWQE EVT RQLE+VSNQMLELYE + Sbjct: 198 PKEGDKVWWQEFEVTPRQLEEVSNQMLELYEQN 230
>tr|A7QCS7|A7QCS7_VITVI Chromosome undetermined scaffold_79, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00035533001 PE=3 SV=1 Length = 502
Score = 167 bits (424), Expect = 4e-40 Identities = 90/162 (55%), Positives = 113/162 (69%) Frame = +2
Query: 2 ETPKLLQNVLSLSYDIRHKRDKVAAERIKQKEVYEHEKEQVLLAENVVLQTLGFELNVIH 181 ETP+ L++V+ +SY+I HKRD A ++IKQKEVYE +KE +L+ E VVL TLGF+LNV H Sbjct: 118 ETPRPLKDVILVSYEIIHKRDPAAVQKIKQKEVYEQQKELILIGERVVLATLGFDLNVHH 177
Query: 182 PYKRXXXXXXXXXXTEKSLAQVAWNFLNDALRTSLCLQYEAHYIAAGGIFLAAKFLKMKL 361 PYK + S + W LRTSLCLQ++ +IAAG IFLAAKFLK+KL Sbjct: 178 PYKPLFHFKWSLFLSFSS-SLTHWKAAC-RLRTSLCLQFKPDHIAAGAIFLAAKFLKVKL 235
Query: 362 PTDCEKPWWQELEVTARQLEDVSNQMLELYEHHRDSTPSPSG 487 P+D E WWQE +VT RQLE++SNQMLELYE +R P P G Sbjct: 236 PSDGEVVWWQEFDVTPRQLEEISNQMLELYEQNR--VPPPQG 275
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