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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK958049
Clone id TST39A01NGRL0029_P18
Library
Length 655
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0029_P18. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
ATTTGGTGTTGAGCTTCTGTGAAGGCGTCTTTGCACACGCCTCCTGCAGGAGCTTAGCCT
AACTTCTCGTCCGTCGCTCTTCCGGCTCCAGCGAAAATGAGAGAGTGCATCTCCATCCAC
ATTGGCCAGGCTGGGATTCAGGTCGGCAATGCCTGCTGGGAGCTTTACTGTCTCGAACAT
GGCATCCAGCCAGATGGTCAGATGCCAAGTGACAAGACTGTTGGTGGAGGAGATGATGCA
TTTAACACTTTTTTTAGTGAGACAGGGGCTGGGAAGCATGTGCCAAGGGCCATCTTTGTG
GACCTGGAGCCAACTGTGATTGATGAGGTGCGAACTGGCACCTATAGGCAGCTTTTCCAC
CCAGAGCAGCTCATAAGTGGCAAGGAGGATGCTGCCAACAACTTTGCCCGTGGCCATTAT
ACCATTGGTAAAGAGATTGTGGACCTCTGCCTTGATCGCATCCGCAAATTGGCAGACAAT
TGCACAGGCCTGCAAGGTTTTCTTGTCTTTAATGCTGTGGGAGGTGGCACAGGGTCTGGC
TTAGGATCGTTGCTTCTTGAAAGGCTCTCAGTTGATTACGGTAAGAAGTCCAAGCTGGGT
TTTACTGTCTACCCTTCTCCGCAGGTGTCAACCTCTGTTGTGGAACCATACAATA
■■Homology search results ■■ -
sp_hit_id P29510
Definition sp|P29510|TBA2_ARATH Tubulin alpha-2/alpha-4 chain OS=Arabidopsis thaliana
Align length 186
Score (bit) 346.0
E-value 7.0e-95
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK958049|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0029_P18, 5'
         (655 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P29510|TBA2_ARATH Tubulin alpha-2/alpha-4 chain OS=Arabidopsi...   346   7e-95
sp|P33629|TBA_PRUDU Tubulin alpha chain OS=Prunus dulcis GN=TUBA...   344   2e-94
sp|P29511|TBA6_ARATH Tubulin alpha-6 chain OS=Arabidopsis thalia...   344   2e-94
sp|Q9ZRR5|TBA3_HORVU Tubulin alpha-3 chain OS=Hordeum vulgare GN...   344   2e-94
sp|Q6VAF9|TBA4_GOSHI Tubulin alpha-4 chain OS=Gossypium hirsutum...   344   3e-94
sp|Q6VAG0|TBA2_GOSHI Tubulin alpha-2 chain OS=Gossypium hirsutum...   344   3e-94
sp|Q9FT36|TBA_DAUCA Tubulin alpha chain OS=Daucus carota GN=TBA ...   343   5e-94
sp|P46259|TBA1_PEA Tubulin alpha-1 chain OS=Pisum sativum GN=TUB...   342   8e-94
sp|Q53M52|TBA2_ORYSJ Tubulin alpha-2 chain OS=Oryza sativa subsp...   342   1e-93
sp|Q96460|TBA2_HORVU Tubulin alpha-2 chain OS=Hordeum vulgare GN...   341   2e-93
sp|Q6VAG1|TBA1_GOSHI Tubulin alpha-1 chain OS=Gossypium hirsutum...   341   2e-93
sp|P14641|TBA2_MAIZE Tubulin alpha-2 chain OS=Zea mays GN=TUBA2 ...   341   2e-93
sp|P14640|TBA1_MAIZE Tubulin alpha-1 chain OS=Zea mays GN=TUBA1 ...   341   2e-93
sp|O22347|TBA1_ELEIN Tubulin alpha-1 chain OS=Eleusine indica GN...   341   2e-93
sp|Q9ZRB7|TBA_WHEAT Tubulin alpha chain OS=Triticum aestivum GN=...   340   4e-93
sp|P33623|TBA1_ANEPH Tubulin alpha-1 chain OS=Anemia phyllitidis...   338   1e-92
sp|Q9ZRJ4|TBA_CHLVU Tubulin alpha chain OS=Chlorella vulgaris GN...   338   2e-92
sp|P41351|TBA_TETTH Tubulin alpha chain OS=Tetrahymena thermophi...   334   2e-91
sp|P10872|TBA_TETPY Tubulin alpha chain OS=Tetrahymena pyriformi...   334   2e-91
sp|P09205|TBA2_CHLRE Tubulin alpha-2 chain OS=Chlamydomonas rein...   334   2e-91
sp|P11481|TBA1_VOLCA Tubulin alpha-1/alpha-2 chain OS=Volvox car...   334   2e-91
sp|P09204|TBA1_CHLRE Tubulin alpha-1 chain OS=Chlamydomonas rein...   334   2e-91
sp|P22275|TBA3_MAIZE Tubulin alpha-3 chain OS=Zea mays GN=TUBA3 ...   330   3e-90
sp|P28287|TBA_OXYGR Tubulin alpha chain OS=Oxytricha granulifera...   330   5e-90
sp|P07304|TBA1_STYLE Tubulin alpha-1 chain OS=Stylonychia lemnae...   329   9e-90
sp|P20363|TBA3_ARATH Tubulin alpha-3/alpha-5 chain OS=Arabidopsi...   326   8e-89
sp|P28752|TBA1_ORYSJ Tubulin alpha-1 chain OS=Oryza sativa subsp...   324   2e-88
sp|Q08114|TBA_EUPOC Tubulin alpha chain OS=Euplotes octocarinatu...   323   5e-88
sp|P09243|TBA2_STYLE Tubulin alpha-2 chain OS=Stylonychia lemnae...   323   5e-88
sp|P11237|TBA1_NAEGR Tubulin alpha-1/2/3 chain OS=Naegleria grub...   323   6e-88

>sp|P29510|TBA2_ARATH Tubulin alpha-2/alpha-4 chain OS=Arabidopsis
           thaliana GN=TUBA2 PE=2 SV=1
          Length = 450

 Score =  346 bits (887), Expect = 7e-95
 Identities = 168/186 (90%), Positives = 169/186 (90%)
 Frame = +1

Query: 97  MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 276
           MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK
Sbjct: 1   MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60

Query: 277 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 456
           HVPRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 457 RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTS 636
           RIRKLADNCTGLQGFLVFNAV                 VDYGKKSKLGFTVYPSPQVSTS
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 637 VVEPYN 654
           VVEPYN
Sbjct: 181 VVEPYN 186


>sp|P33629|TBA_PRUDU Tubulin alpha chain OS=Prunus dulcis GN=TUBA
           PE=2 SV=1
          Length = 450

 Score =  344 bits (883), Expect = 2e-94
 Identities = 167/186 (89%), Positives = 168/186 (90%)
 Frame = +1

Query: 97  MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 276
           MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMP DKTVGGGDDAFNTFFSETGAGK
Sbjct: 1   MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60

Query: 277 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 456
           HVPRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 457 RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTS 636
           RIRKLADNCTGLQGFLVFNAV                 VDYGKKSKLGFTVYPSPQVSTS
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 637 VVEPYN 654
           VVEPYN
Sbjct: 181 VVEPYN 186


>sp|P29511|TBA6_ARATH Tubulin alpha-6 chain OS=Arabidopsis thaliana
           GN=TUBA6 PE=2 SV=1
          Length = 450

 Score =  344 bits (883), Expect = 2e-94
 Identities = 167/186 (89%), Positives = 168/186 (90%)
 Frame = +1

Query: 97  MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 276
           MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMP DKTVGGGDDAFNTFFSETGAGK
Sbjct: 1   MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60

Query: 277 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 456
           HVPRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 457 RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTS 636
           RIRKLADNCTGLQGFLVFNAV                 VDYGKKSKLGFTVYPSPQVSTS
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 637 VVEPYN 654
           VVEPYN
Sbjct: 181 VVEPYN 186


>sp|Q9ZRR5|TBA3_HORVU Tubulin alpha-3 chain OS=Hordeum vulgare
           GN=TUBA3 PE=2 SV=1
          Length = 451

 Score =  344 bits (883), Expect = 2e-94
 Identities = 167/186 (89%), Positives = 168/186 (90%)
 Frame = +1

Query: 97  MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 276
           MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMP DKTVGGGDDAFNTFFSETGAGK
Sbjct: 1   MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60

Query: 277 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 456
           HVPRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 457 RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTS 636
           RIRKLADNCTGLQGFLVFNAV                 VDYGKKSKLGFTVYPSPQVSTS
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 637 VVEPYN 654
           VVEPYN
Sbjct: 181 VVEPYN 186


>sp|Q6VAF9|TBA4_GOSHI Tubulin alpha-4 chain OS=Gossypium hirsutum
           PE=2 SV=1
          Length = 450

 Score =  344 bits (882), Expect = 3e-94
 Identities = 167/186 (89%), Positives = 168/186 (90%)
 Frame = +1

Query: 97  MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 276
           MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK
Sbjct: 1   MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60

Query: 277 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 456
           HVPRA+FVDLEPTVIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61  HVPRAVFVDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 457 RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTS 636
           RIRKLADNCTGLQGFLVFNAV                 VDYGKKSKLGFTVYPSPQVSTS
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 637 VVEPYN 654
           VVEPYN
Sbjct: 181 VVEPYN 186


>sp|Q6VAG0|TBA2_GOSHI Tubulin alpha-2 chain OS=Gossypium hirsutum
           PE=2 SV=1
          Length = 450

 Score =  344 bits (882), Expect = 3e-94
 Identities = 167/186 (89%), Positives = 168/186 (90%)
 Frame = +1

Query: 97  MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 276
           MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK
Sbjct: 1   MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60

Query: 277 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 456
           HVPRA+FVDLEPTVIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61  HVPRAVFVDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 457 RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTS 636
           RIRKLADNCTGLQGFLVFNAV                 VDYGKKSKLGFTVYPSPQVSTS
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 637 VVEPYN 654
           VVEPYN
Sbjct: 181 VVEPYN 186


>sp|Q9FT36|TBA_DAUCA Tubulin alpha chain OS=Daucus carota GN=TBA
           PE=2 SV=1
          Length = 451

 Score =  343 bits (880), Expect = 5e-94
 Identities = 165/186 (88%), Positives = 169/186 (90%)
 Frame = +1

Query: 97  MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 276
           MRECIS+HIGQAGIQ+GNACWELYCLEHGIQP+GQMPSDKTVGGGDDAFNTFFSETGAGK
Sbjct: 1   MRECISVHIGQAGIQIGNACWELYCLEHGIQPNGQMPSDKTVGGGDDAFNTFFSETGAGK 60

Query: 277 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 456
           HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61  HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 457 RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTS 636
           RIRKLADNCTGLQGFLVFNAV                 VDYGKKSKLGFTVYPSPQ+STS
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQISTS 180

Query: 637 VVEPYN 654
           VVEPYN
Sbjct: 181 VVEPYN 186


>sp|P46259|TBA1_PEA Tubulin alpha-1 chain OS=Pisum sativum GN=TUBA1
           PE=3 SV=1
          Length = 452

 Score =  342 bits (878), Expect = 8e-94
 Identities = 166/186 (89%), Positives = 167/186 (89%)
 Frame = +1

Query: 97  MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 276
           MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMP DKTVGGGDDAFNTFFSETGAGK
Sbjct: 1   MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60

Query: 277 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 456
           HVPRA+FVDLEPTVIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61  HVPRAVFVDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 457 RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTS 636
           RIRKLADNCTGLQGFLVFNAV                 VDYGKKSKLGFTVYPSPQVSTS
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 637 VVEPYN 654
           VVEPYN
Sbjct: 181 VVEPYN 186


>sp|Q53M52|TBA2_ORYSJ Tubulin alpha-2 chain OS=Oryza sativa subsp.
           japonica GN=TUBA PE=2 SV=1
          Length = 451

 Score =  342 bits (877), Expect = 1e-93
 Identities = 166/186 (89%), Positives = 167/186 (89%)
 Frame = +1

Query: 97  MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 276
           MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMP DKTVGGGDDAFNTFFSETGAGK
Sbjct: 1   MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60

Query: 277 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 456
           HVPRA+FVDLEPTVIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61  HVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 457 RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTS 636
           RIRKLADNCTGLQGFLVFNAV                 VDYGKKSKLGFTVYPSPQVSTS
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 637 VVEPYN 654
           VVEPYN
Sbjct: 181 VVEPYN 186


>sp|Q96460|TBA2_HORVU Tubulin alpha-2 chain OS=Hordeum vulgare
           GN=TUBA2 PE=2 SV=1
          Length = 451

 Score =  341 bits (875), Expect = 2e-93
 Identities = 165/186 (88%), Positives = 167/186 (89%)
 Frame = +1

Query: 97  MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 276
           MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMP DKTVGGGDDAFNTFFSETGAGK
Sbjct: 1   MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60

Query: 277 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 456
           HVPRA+FVDLEPTVIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61  HVPRAVFVDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 457 RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTS 636
           RIRKL+DNCTGLQGFLVFNAV                 VDYGKKSKLGFTVYPSPQVSTS
Sbjct: 121 RIRKLSDNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 637 VVEPYN 654
           VVEPYN
Sbjct: 181 VVEPYN 186
tr_hit_id Q84UZ5
Definition tr|Q84UZ5|Q84UZ5_CERRI Alpha-tubulin OS=Ceratopteris richardii
Align length 186
Score (bit) 346.0
E-value 6.0e-94
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK958049|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0029_P18, 5'
         (655 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q84UZ5|Q84UZ5_CERRI Alpha-tubulin OS=Ceratopteris richardii G...   346   6e-94
tr|Q5ME66|Q5ME66_PSEMZ Alpha tubulin 1 OS=Pseudotsuga menziesii ...   346   8e-94
tr|Q0WV25|Q0WV25_ARATH Tubulin alpha-2/alpha-4 chain OS=Arabidop...   346   8e-94
tr|B7TIW7|B7TIW7_BETVE Alpha tubulin OS=Betula verrucosa PE=2 SV=1    346   8e-94
tr|A9QVH4|A9QVH4_9CONI Alpha tubulin OS=Picea wilsonii GN=TUA1 P...   346   8e-94
tr|A9PL19|A9PL19_GOSHI Alpha-tubulin OS=Gossypium hirsutum GN=TU...   346   8e-94
tr|A9P849|A9P849_POPTR Putative uncharacterized protein OS=Popul...   346   8e-94
tr|A5HJR1|A5HJR1_THEHA TUA2 (TUA2-2) OS=Thellungiella halophila ...   346   8e-94
tr|A9PL15|A9PL15_GOSHI Alpha-tubulin OS=Gossypium hirsutum GN=TU...   345   1e-93
tr|A7QZH1|A7QZH1_VITVI Chromosome chr7 scaffold_275, whole genom...   345   1e-93
tr|Q84XV0|Q84XV0_POPTM Alpha tubulin OS=Populus tremuloides PE=2...   344   2e-93
tr|Q84TK6|Q84TK6_POPTM Alpha-tubulin 1 OS=Populus tremuloides PE...   344   2e-93
tr|Q3EA24|Q3EA24_ARATH Uncharacterized protein At4g14960.1 OS=Ar...   344   2e-93
tr|Q1ZZV1|Q1ZZV1_BRACM Tubulin alpha-1 chain OS=Brassica rapa su...   344   2e-93
tr|A9PL16|A9PL16_GOSHI Alpha-tubulin OS=Gossypium hirsutum GN=TU...   344   2e-93
tr|A9PHZ8|A9PHZ8_POPTR Putative uncharacterized protein OS=Popul...   344   2e-93
tr|A9P817|A9P817_POPTR Putative uncharacterized protein OS=Popul...   344   2e-93
tr|A5YRY1|A5YRY1_POPTM Alpha-tubulin 5 OS=Populus tremuloides PE...   344   2e-93
tr|A4K4Y4|A4K4Y4_WHEAT Alpha tubulin-3B (Alpha tubulin-3A) (Alph...   344   2e-93
tr|Q8VXD1|Q8VXD1_TOBAC Alpha-tubulin OS=Nicotiana tabacum GN=tub...   344   3e-93
tr|Q8VXC9|Q8VXC9_TOBAC Alpha-tubulin OS=Nicotiana tabacum GN=tub...   344   3e-93
tr|Q38JI1|Q38JI1_SOLTU Putative uncharacterized protein OS=Solan...   344   3e-93
tr|A9PL18|A9PL18_GOSHI Alpha-tubulin OS=Gossypium hirsutum GN=TU...   344   3e-93
tr|A5BZF5|A5BZF5_VITVI Putative uncharacterized protein (Chromos...   344   3e-93
tr|Q8VXD0|Q8VXD0_TOBAC Alpha-tubulin OS=Nicotiana tabacum GN=tub...   343   4e-93
tr|Q8H6L8|Q8H6L8_GOSHI Alpha-tubulin 4 (Fragment) OS=Gossypium h...   343   4e-93
tr|A9SEI4|A9SEI4_PHYPA Predicted protein OS=Physcomitrella paten...   343   4e-93
tr|A7QH45|A7QH45_VITVI Chromosome chr3 scaffold_95, whole genome...   343   4e-93
tr|A5YRY0|A5YRY0_POPTM Alpha-tubulin 3 OS=Populus tremuloides PE...   343   4e-93
tr|Q93XB1|Q93XB1_ROSHC Alpha tubulin subunit OS=Rosa hybrid cult...   343   5e-93

>tr|Q84UZ5|Q84UZ5_CERRI Alpha-tubulin OS=Ceratopteris richardii
           GN=TUA1 PE=2 SV=1
          Length = 450

 Score =  346 bits (888), Expect = 6e-94
 Identities = 169/186 (90%), Positives = 169/186 (90%)
 Frame = +1

Query: 97  MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 276
           MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK
Sbjct: 1   MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60

Query: 277 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 456
           HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61  HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 457 RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTS 636
           RIRKLADNCTGLQGFLVFNAV                 VDYGKKSKLGFTVYPSPQVSTS
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 637 VVEPYN 654
           VVEPYN
Sbjct: 181 VVEPYN 186


>tr|Q5ME66|Q5ME66_PSEMZ Alpha tubulin 1 OS=Pseudotsuga menziesii
           var. menziesii GN=AT1 PE=3 SV=1
          Length = 451

 Score =  346 bits (887), Expect = 8e-94
 Identities = 168/186 (90%), Positives = 169/186 (90%)
 Frame = +1

Query: 97  MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 276
           MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK
Sbjct: 1   MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60

Query: 277 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 456
           HVPRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 457 RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTS 636
           RIRKLADNCTGLQGFLVFNAV                 VDYGKKSKLGFTVYPSPQVSTS
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 637 VVEPYN 654
           VVEPYN
Sbjct: 181 VVEPYN 186


>tr|Q0WV25|Q0WV25_ARATH Tubulin alpha-2/alpha-4 chain OS=Arabidopsis
           thaliana GN=At1g04820 PE=2 SV=1
          Length = 450

 Score =  346 bits (887), Expect = 8e-94
 Identities = 168/186 (90%), Positives = 169/186 (90%)
 Frame = +1

Query: 97  MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 276
           MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK
Sbjct: 1   MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60

Query: 277 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 456
           HVPRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 457 RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTS 636
           RIRKLADNCTGLQGFLVFNAV                 VDYGKKSKLGFTVYPSPQVSTS
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 637 VVEPYN 654
           VVEPYN
Sbjct: 181 VVEPYN 186


>tr|B7TIW7|B7TIW7_BETVE Alpha tubulin OS=Betula verrucosa PE=2 SV=1
          Length = 450

 Score =  346 bits (887), Expect = 8e-94
 Identities = 168/186 (90%), Positives = 169/186 (90%)
 Frame = +1

Query: 97  MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 276
           MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK
Sbjct: 1   MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60

Query: 277 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 456
           HVPRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 457 RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTS 636
           RIRKLADNCTGLQGFLVFNAV                 VDYGKKSKLGFTVYPSPQVSTS
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 637 VVEPYN 654
           VVEPYN
Sbjct: 181 VVEPYN 186


>tr|A9QVH4|A9QVH4_9CONI Alpha tubulin OS=Picea wilsonii GN=TUA1 PE=2
           SV=1
          Length = 451

 Score =  346 bits (887), Expect = 8e-94
 Identities = 168/186 (90%), Positives = 169/186 (90%)
 Frame = +1

Query: 97  MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 276
           MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK
Sbjct: 1   MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60

Query: 277 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 456
           HVPRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 457 RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTS 636
           RIRKLADNCTGLQGFLVFNAV                 VDYGKKSKLGFTVYPSPQVSTS
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 637 VVEPYN 654
           VVEPYN
Sbjct: 181 VVEPYN 186


>tr|A9PL19|A9PL19_GOSHI Alpha-tubulin OS=Gossypium hirsutum GN=TUA10
           PE=2 SV=1
          Length = 450

 Score =  346 bits (887), Expect = 8e-94
 Identities = 168/186 (90%), Positives = 169/186 (90%)
 Frame = +1

Query: 97  MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 276
           MRECIS+HIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK
Sbjct: 1   MRECISVHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60

Query: 277 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 456
           HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61  HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 457 RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTS 636
           RIRKLADNCTGLQGFLVFNAV                 VDYGKKSKLGFTVYPSPQVSTS
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 637 VVEPYN 654
           VVEPYN
Sbjct: 181 VVEPYN 186


>tr|A9P849|A9P849_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 451

 Score =  346 bits (887), Expect = 8e-94
 Identities = 168/186 (90%), Positives = 169/186 (90%)
 Frame = +1

Query: 97  MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 276
           MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK
Sbjct: 1   MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60

Query: 277 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 456
           HVPRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 457 RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTS 636
           RIRKLADNCTGLQGFLVFNAV                 VDYGKKSKLGFTVYPSPQVSTS
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 637 VVEPYN 654
           VVEPYN
Sbjct: 181 VVEPYN 186


>tr|A5HJR1|A5HJR1_THEHA TUA2 (TUA2-2) OS=Thellungiella halophila
           PE=2 SV=1
          Length = 450

 Score =  346 bits (887), Expect = 8e-94
 Identities = 168/186 (90%), Positives = 169/186 (90%)
 Frame = +1

Query: 97  MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 276
           MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK
Sbjct: 1   MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60

Query: 277 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 456
           HVPRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 457 RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTS 636
           RIRKLADNCTGLQGFLVFNAV                 VDYGKKSKLGFTVYPSPQVSTS
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 637 VVEPYN 654
           VVEPYN
Sbjct: 181 VVEPYN 186


>tr|A9PL15|A9PL15_GOSHI Alpha-tubulin OS=Gossypium hirsutum GN=TUA6
           PE=2 SV=1
          Length = 450

 Score =  345 bits (886), Expect = 1e-93
 Identities = 167/186 (89%), Positives = 169/186 (90%)
 Frame = +1

Query: 97  MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 276
           MRECIS+HIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK
Sbjct: 1   MRECISVHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60

Query: 277 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 456
           HVPRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 457 RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTS 636
           RIRKLADNCTGLQGFLVFNAV                 VDYGKKSKLGFTVYPSPQVSTS
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 637 VVEPYN 654
           VVEPYN
Sbjct: 181 VVEPYN 186


>tr|A7QZH1|A7QZH1_VITVI Chromosome chr7 scaffold_275, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00010650001
           PE=3 SV=1
          Length = 451

 Score =  345 bits (886), Expect = 1e-93
 Identities = 167/186 (89%), Positives = 169/186 (90%)
 Frame = +1

Query: 97  MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 276
           MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKT+GGGDDAFNTFFSETGAGK
Sbjct: 1   MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGK 60

Query: 277 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 456
           HVPRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 457 RIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTS 636
           RIRKLADNCTGLQGFLVFNAV                 VDYGKKSKLGFTVYPSPQVSTS
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 637 VVEPYN 654
           VVEPYN
Sbjct: 181 VVEPYN 186