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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK958051
Clone id TST39A01NGRL0029_P20
Library
Length 636
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0029_P20. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
TTCCGTGCAGGATTGGGAACTTCTCTCCGCCTCAACCTTACTTGCTCAAGGTCATGGATT
AGGGTTTGGGCTACCTCCCCTCACTACTCCTGTATTACACGCCAGTCCTTTAGAAGATGA
TGGAGTTTCCCGTCGAGATGTAGTCTCTGATACAGAACTGGGTTTCATTCTTCGTGGCAA
AGATGGCAGCTCTCTCTCTCTGGACGCTAGCCAGATTGCCATCGTCTGTTCTACTTCTAC
CTCTTCTGTCGAGCCTTTTACAGAAGGATGGAAACCCCAGTTTCGAATAGCAGGTGCTTC
TTTGCAGGAGAATTACTATGCCCCGGATCCTTTTGCTCCTGCTGCATCTCATACTGGTAG
CTCTCTCGAACCTTTTCTGGATATGGAACAAAGCTTCCTTGCAGAGCCGACCAGAGCTGC
AGATAATGAAATGATCAAATTATCAAATGTGGATAAGAATCCAGAGTTTCTTCGAGCTGA
TTATGCAGAGAGATGCATGAAGCGTGCAGTCTCTCCACATCAGCAAGAAAGGGATAAAGA
GGAATTTTCTACAGAGGAGGGAAAAATTGAAACACTTCTAGTGAACTCTGGCATTCTTGA
TTTCGACAAGACTATGGACAAGATTAATTGCATTGA
■■Homology search results ■■ -
sp_hit_id Q97T80
Definition sp|Q97T80|ZMPC_STRPN Zinc metalloprotease zmpC OS=Streptococcus pneumoniae
Align length 59
Score (bit) 35.0
E-value 0.32
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK958051|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0029_P20, 5'
         (636 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q97T80|ZMPC_STRPN Zinc metalloprotease zmpC OS=Streptococcus ...    35   0.32 
sp|Q6P1C6|LRIG3_MOUSE Leucine-rich repeats and immunoglobulin-li...    32   2.1  
sp|Q59606|MTF7_NEIGO Modification methylase NgoFVII OS=Neisseria...    32   2.7  
sp|Q9Y6Y1|CMTA1_HUMAN Calmodulin-binding transcription activator...    32   3.6  
sp|Q5QNA6|SCRL2_ORYSJ SCAR-like protein 2 OS=Oryza sativa subsp....    31   4.7  
sp|P50641|RIR1_HHV7J Ribonucleoside-diphosphate reductase large ...    31   6.1  
sp|Q9QYY0|GAB1_MOUSE GRB2-associated-binding protein 1 OS=Mus mu...    31   6.1  
sp|Q5UQ40|UBC4_MIMIV Probable bifunctional E2/E3 enzyme R795 OS=...    31   6.2  
sp|Q9I7U4|TITIN_DROME Titin OS=Drosophila melanogaster GN=sls PE...    30   8.0  
sp|B0JNW9|SYD_MICAN Aspartyl-tRNA synthetase OS=Microcystis aeru...    30   8.0  
sp|P48008|SPN3_SCHPO Septin homolog spn3 OS=Schizosaccharomyces ...    30   8.0  

>sp|Q97T80|ZMPC_STRPN Zinc metalloprotease zmpC OS=Streptococcus
            pneumoniae GN=zmpC PE=3 SV=1
          Length = 1856

 Score = 35.0 bits (79), Expect = 0.32
 Identities = 18/59 (30%), Positives = 27/59 (45%)
 Frame = +2

Query: 308  ENYYAPDPFAPAASHTGSSLEPFLDMEQSFLAEPTRAADNEMIKLSNVDKNPEFLRADY 484
            ENYY  D      +H G+ + P  D E + L       DN++I   + D + E+ R  Y
Sbjct: 1613 ENYYVRDTRHNKDTHAGNKVRPLTDEEVANLTSLNSLIDNDIINRRSYDDSREYKRNGY 1671


>sp|Q6P1C6|LRIG3_MOUSE Leucine-rich repeats and immunoglobulin-like
            domains protein 3 OS=Mus musculus GN=Lrig3 PE=2 SV=1
          Length = 1117

 Score = 32.3 bits (72), Expect = 2.1
 Identities = 39/150 (26%), Positives = 62/150 (41%), Gaps = 2/150 (1%)
 Frame = +2

Query: 161  GFILRGKDGS-SLSLDASQIAIVCSTSTSSVEPFTEGWKPQFRIAGASLQENYYAPDPFA 337
            GF L   DG+ +   D S  A V + S   + PF     P +      LQ N Y+PDPF 
Sbjct: 889  GFFLPQHDGAGTCHFDDSSEADVEAASDPFLCPFVGSTGPVY------LQGNLYSPDPF- 941

Query: 338  PAASHTGSSLEPFLDMEQSFLAEPTRAADNEMIKLSNVDKNPEFLRADYAERCMKRAVSP 517
                  G S +P     ++ L +   ++  +  + S    + E       ER +K    P
Sbjct: 942  -EVYLPGCSSDP-----RTALMDHCESSYVKQDRFSCARPSEE-----PCERSLKSIPWP 990

Query: 518  HQQERDKEEFSTEEG-KIETLLVNSGILDF 604
            H ++     +   EG  ++TL +N   +DF
Sbjct: 991  HSRKLTDSTYPPNEGHTVQTLCLNKSSVDF 1020


>sp|Q59606|MTF7_NEIGO Modification methylase NgoFVII OS=Neisseria
           gonorrhoeae GN=ngoFVIIM PE=3 SV=1
          Length = 374

 Score = 32.0 bits (71), Expect = 2.7
 Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
 Frame = +2

Query: 242 SSVEPFTEGWKPQFR----IAGASLQENYYAPDPFAPAASHTGSS-LEPFLDMEQSFLAE 406
           ++V  F E   PQFR    I G  L   +    P  P  + TG + L+P++   Q+    
Sbjct: 156 ANVYNFAEFGVPQFRERVLIVGVRLDTGFDFRHP-EPTHNETGENGLKPYVTAGQAISNI 214

Query: 407 PTRAADNEMIKLSN 448
           P  A++NE++K+S+
Sbjct: 215 PQNASNNELLKISD 228


>sp|Q9Y6Y1|CMTA1_HUMAN Calmodulin-binding transcription activator 1
            OS=Homo sapiens GN=CAMTA1 PE=1 SV=4
          Length = 1673

 Score = 31.6 bits (70), Expect = 3.6
 Identities = 33/129 (25%), Positives = 53/129 (41%), Gaps = 4/129 (3%)
 Frame = +2

Query: 242  SSVEPFTEGWKPQFRIAGASLQENYYAPDPFAPAASHTGSSLEPFLDMEQSFLAEPTRAA 421
            +S EP TE W  Q+     S         P  P      +S  P L   +S   EP+   
Sbjct: 1184 ASEEPSTESWMAQWHSEAIS--------SPEIPKGVTVIASTNPELRRPRS---EPSNYY 1232

Query: 422  DNEMIKLSNVDK----NPEFLRADYAERCMKRAVSPHQQERDKEEFSTEEGKIETLLVNS 589
             +E  K     K    NPE+ +    E+ +  A+S  +    K+  S+++   ETL  + 
Sbjct: 1233 SSESHKDYPAPKKHKLNPEYFQTRQ-EKLLPTALSLEEPNIRKQSPSSKQSVPETLSPSE 1291

Query: 590  GILDFDKTM 616
            G+ DF + +
Sbjct: 1292 GVRDFSREL 1300


>sp|Q5QNA6|SCRL2_ORYSJ SCAR-like protein 2 OS=Oryza sativa subsp.
           japonica GN=Os01g0208600 PE=2 SV=1
          Length = 1334

 Score = 31.2 bits (69), Expect = 4.7
 Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 6/50 (12%)
 Frame = +2

Query: 479 DYAERCMKRAVSPHQQERDKEEFSTEE------GKIETLLVNSGILDFDK 610
           D AE    + +SP QQE D  E  T E       K + LLV+SG+   D+
Sbjct: 377 DKAEHVQSKCISPEQQEIDHREMETLEQQEALHQKAKQLLVSSGLNHHDE 426


>sp|P50641|RIR1_HHV7J Ribonucleoside-diphosphate reductase large
           chain OS=Human herpesvirus 7 (strain JI) GN=U28 PE=3
           SV=1
          Length = 806

 Score = 30.8 bits (68), Expect = 6.1
 Identities = 28/98 (28%), Positives = 46/98 (46%)
 Frame = +2

Query: 155 ELGFILRGKDGSSLSLDASQIAIVCSTSTSSVEPFTEGWKPQFRIAGASLQENYYAPDPF 334
           ++GFI R K+    S+   QIA  C  ++  V PF  G    FRIA   L  +Y+  +  
Sbjct: 399 QMGFIFR-KNIHKYSM-LPQIASYCLGNSMDVIPFEYGLNTAFRIA---LNLSYFVENVS 453

Query: 335 APAASHTGSSLEPFLDMEQSFLAEPTRAADNEMIKLSN 448
               SHT  +++ F   ++ F  +  R    E++ + N
Sbjct: 454 EEQKSHT--NIDMFHYRDKIFNLKKMRKTVTELVLIGN 489


>sp|Q9QYY0|GAB1_MOUSE GRB2-associated-binding protein 1 OS=Mus
           musculus GN=Gab1 PE=1 SV=2
          Length = 695

 Score = 30.8 bits (68), Expect = 6.1
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
 Frame = +2

Query: 230 STSTSSVEPFTEGWKPQF-----RIAGASLQENYYAPDPFAPAASHTGSSLEP 373
           S  +SS+E F   +K +       ++G  L ENY   +P +P   H+GS  EP
Sbjct: 415 SDRSSSLEGFHSQYKIKSVLTAGGVSGEELDENYVPMNPNSPPRQHSGSFTEP 467


>sp|Q5UQ40|UBC4_MIMIV Probable bifunctional E2/E3 enzyme R795
           OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R795 PE=3
           SV=1
          Length = 1297

 Score = 30.8 bits (68), Expect = 6.2
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +1

Query: 283 SNSRCFFAGELLCPGSFCSCCISYW 357
           SN++C  A  + C  SF +CCIS W
Sbjct: 93  SNTKCPIAQSVSCSHSFHACCISRW 117


>sp|Q9I7U4|TITIN_DROME Titin OS=Drosophila melanogaster GN=sls PE=1 SV=3
          Length = 18141

 Score = 30.4 bits (67), Expect = 8.0
 Identities = 26/107 (24%), Positives = 47/107 (43%), Gaps = 13/107 (12%)
 Frame = +2

Query: 329   PFAPAASHTGSSLEPFLDMEQSFLAE------PTRAADNEMIKLSNVDKNPEFLRADYAE 490
             P   A     S LE  + +E+  + E      P + +  + IK  +VDK+P++L    +E
Sbjct: 13741 PIERALEKPSSPLEYTISVEEDSVGEEQKQPKPKKISKPKSIKQPSVDKSPDYLVNVISE 13800

Query: 491   RCM-------KRAVSPHQQERDKEEFSTEEGKIETLLVNSGILDFDK 610
               +          V+   +E+  EE + +  ++ET  V   + D DK
Sbjct: 13801 ESIIDEPIPEDYVVTEAAEEKPSEEPTFKVEELETEAVEKEVTDDDK 13847


>sp|B0JNW9|SYD_MICAN Aspartyl-tRNA synthetase OS=Microcystis
           aeruginosa (strain NIES-843) GN=aspS PE=3 SV=1
          Length = 595

 Score = 30.4 bits (67), Expect = 8.0
 Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 6/82 (7%)
 Frame = +2

Query: 377 LDMEQSFLAEPTRAADNEMI------KLSNVDKNPEFLRADYAERCMKRAVSPHQQERDK 538
           LDME SFL+ P   A NE +      K+ N+D +    R  YAE     A+  +  +R  
Sbjct: 239 LDMEMSFLSLPEILALNEALIAHIFKKVKNIDISLPLPRLTYAE-----AMDRYGIDRPD 293

Query: 539 EEFSTEEGKIETLLVNSGILDF 604
             F  E   +  +  +SG   F
Sbjct: 294 TRFGLELVNVAEIFADSGFKVF 315
tr_hit_id B5E5L7
Definition tr|B5E5L7|B5E5L7_STRP4 Zinc metalloprotease ZmpC OS=Streptococcus pneumoniae serotype 19F (strain G54)
Align length 59
Score (bit) 37.0
E-value 1.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK958051|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0029_P20, 5'
         (636 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B5E5L7|B5E5L7_STRP4 Zinc metalloprotease ZmpC OS=Streptococcu...    37   1.00 
tr|B2E7B9|B2E7B9_STRPN IgA1 protease OS=Streptococcus pneumoniae...    37   1.00 
tr|A5LXZ4|A5LXZ4_STRPN Immunoglobulin A1 protease OS=Streptococc...    37   1.00 
tr|A5LVE4|A5LVE4_STRPN Immunoglobulin A1 protease OS=Streptococc...    37   1.00 
tr|Q3IXE8|Q3IXE8_RHOS4 Demethylmenaquinone methyltransferase OS=...    35   5.0  
tr|A3PRM0|A3PRM0_RHOS1 Dimethylmenaquinone methyltransferase OS=...    35   5.0  
tr|B8HC40|B8HC40_9MICC Putative secreted lipoprotein OS=Arthroba...    35   5.0  

>tr|B5E5L7|B5E5L7_STRP4 Zinc metalloprotease ZmpC OS=Streptococcus
            pneumoniae serotype 19F (strain G54) GN=zmpC PE=4 SV=1
          Length = 1856

 Score = 37.0 bits (84), Expect = 1.00
 Identities = 19/59 (32%), Positives = 27/59 (45%)
 Frame = +2

Query: 308  ENYYAPDPFAPAASHTGSSLEPFLDMEQSFLAEPTRAADNEMIKLSNVDKNPEFLRADY 484
            ENYY  D      +H G+ + P  D E + L       DN++I   + D N E+ R  Y
Sbjct: 1613 ENYYVRDTRHNKDTHAGNKVRPLTDEEVANLTSLNSLIDNDIINRRSYDDNREYKRNGY 1671


>tr|B2E7B9|B2E7B9_STRPN IgA1 protease OS=Streptococcus pneumoniae
            MLV-016 GN=SPMLV016_0055 PE=4 SV=1
          Length = 1837

 Score = 37.0 bits (84), Expect = 1.00
 Identities = 19/59 (32%), Positives = 27/59 (45%)
 Frame = +2

Query: 308  ENYYAPDPFAPAASHTGSSLEPFLDMEQSFLAEPTRAADNEMIKLSNVDKNPEFLRADY 484
            ENYY  D      +H G+ + P  D E + L       DN++I   + D N E+ R  Y
Sbjct: 1594 ENYYVRDTRHNKDTHAGNKVRPLTDEEVANLTSLNSLIDNDIINRRSYDDNREYKRNGY 1652


>tr|A5LXZ4|A5LXZ4_STRPN Immunoglobulin A1 protease OS=Streptococcus
            pneumoniae SP11-BS70 GN=CGSSp11BS70_07265 PE=4 SV=1
          Length = 1856

 Score = 37.0 bits (84), Expect = 1.00
 Identities = 19/59 (32%), Positives = 27/59 (45%)
 Frame = +2

Query: 308  ENYYAPDPFAPAASHTGSSLEPFLDMEQSFLAEPTRAADNEMIKLSNVDKNPEFLRADY 484
            ENYY  D      +H G+ + P  D E + L       DN++I   + D N E+ R  Y
Sbjct: 1613 ENYYVRDTRHNKDTHAGNKVRPLTDEEVANLTSLNSLIDNDIINRRSYDDNREYKRNGY 1671


>tr|A5LVE4|A5LVE4_STRPN Immunoglobulin A1 protease OS=Streptococcus
           pneumoniae SP9-BS68 GN=CGSSp9BS68_02813 PE=4 SV=1
          Length = 679

 Score = 37.0 bits (84), Expect = 1.00
 Identities = 19/59 (32%), Positives = 27/59 (45%)
 Frame = +2

Query: 308 ENYYAPDPFAPAASHTGSSLEPFLDMEQSFLAEPTRAADNEMIKLSNVDKNPEFLRADY 484
           ENYY  D      +H G+ + P  D E + L       DN++I   + D N E+ R  Y
Sbjct: 436 ENYYVRDTRHNKDTHAGNKVRPLTDEEVANLTSLNSLIDNDIINRRSYDDNREYKRNGY 494


>tr|Q3IXE8|Q3IXE8_RHOS4 Demethylmenaquinone methyltransferase
           OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 /
           NCIB 8253 / DSM 158) GN=RHOS4_32180 PE=4 SV=1
          Length = 203

 Score = 34.7 bits (78), Expect = 5.0
 Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
 Frame = -3

Query: 337 SKRIRGIVI--LLQRSTCYSKLGFPSFCKRLDRRGRSRTDDGNLASVQR 197
           ++ + G+VI   ++ S   + LGFP F + LD RG ++TD G L +V R
Sbjct: 91  ARGLAGLVIDGAVRDSAQIADLGFPVFARGLDIRGTTKTDRGQLGAVLR 139


>tr|A3PRM0|A3PRM0_RHOS1 Dimethylmenaquinone methyltransferase
           OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH
           2.4.9) GN=Rsph17029_3908 PE=4 SV=1
          Length = 203

 Score = 34.7 bits (78), Expect = 5.0
 Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
 Frame = -3

Query: 337 SKRIRGIVI--LLQRSTCYSKLGFPSFCKRLDRRGRSRTDDGNLASVQR 197
           ++ + G+VI   ++ S   + LGFP F + LD RG ++TD G L +V R
Sbjct: 91  ARGLAGLVIDGAVRDSAQIAALGFPVFARGLDIRGTTKTDRGQLGAVLR 139


>tr|B8HC40|B8HC40_9MICC Putative secreted lipoprotein
           OS=Arthrobacter chlorophenolicus A6 GN=Achl_0753 PE=3
           SV=1
          Length = 213

 Score = 34.7 bits (78), Expect = 5.0
 Identities = 34/103 (33%), Positives = 43/103 (41%), Gaps = 8/103 (7%)
 Frame = +2

Query: 167 ILRGKDGSSLSLDASQIAIVCSTSTSSVEPFTE--------GWKPQFRIAGASLQENYYA 322
           IL+G  G SL+ DA+   I  + +     P T+        GW  Q R   A    NY  
Sbjct: 113 ILKGFPGVSLAADAAGGPIGAAATRDESVPVTDVLLAPGQTGWA-QLRYTQAG---NYMD 168

Query: 323 PDPFAPAASHTGSSLEPFLDMEQSFLAEPTRAADNEMIKLSNV 451
             P   A    G  + P  D E  FLA+PT A  N  IKL  +
Sbjct: 169 CSPVDAA----GYRIYPPEDTESLFLAQPTTACSNADIKLLTI 207