DK958080 |
Clone id |
TST39A01NGRL0030_B01 |
Library |
TST39 |
Length |
562 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0030_B01. 5' end sequence. |
Accession |
DK958080 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL43Contig1 |
Sequence |
CAAGTTTTTCATAATTAAGTCGTATAGCGAAGATGATGTGCACAAAAGTATTAAATACAG TGTGTGGTCAAGTACGCCAAATGGAAACAAACGATTGGACGAAGCTTACAGGAAGGCTCA GGAGAAATCAGAGGCACCTTCAACCTTGTGTCCGGTCTTCTTCTTTTTCTCGGTCAATTG CAGTGGCCAATTTTGCGGGGTGGCTGAGATGGTTGGGCCTGTTGACTTTGGTAAGAACAT GGATTTCTGGCTACAAGGGAAGTGGAATGGTTGCTTGCCTGTCAAATGGCACATCATCAA GGATGTGCCTAATGGCCATTTCAGGCACATAATCCTGTCCAATAATGACAATAAGCCTGT GACACACAGTCGTGACACTCAAGAGGTGCACTTCCATCAAGGCCTTGAAATGCTGAAAAT ATTCAAGTTTTTTCCCACAAGAACATCCTTACTCGACGACTTTGCATTCTACGATGGTCG ACAAAGGGTGTTGCAGGAAAGGAAGTCAAGACAACAGTTGCGGCAGCAGGTGGTGAGGCA GATTAAAGAAAGAGCTTCTGAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9BYJ9 |
Definition |
sp|Q9BYJ9|YTHD1_HUMAN YTH domain family protein 1 OS=Homo sapiens |
Align length |
173 |
Score (bit) |
187.0 |
E-value |
4.0e-47 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q5QM96 |
Definition |
tr|Q5QM96|Q5QM96_ORYSJ cDNA clone:J013046L18, full insert sequence OS=Oryza sativa subsp. japonica |
Align length |
167 |
Score (bit) |
265.0 |
E-value |
1.0e-69 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK958080|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0030_B01, 5' (562 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q5QM96|Q5QM96_ORYSJ cDNA clone:J013046L18, full insert sequen... 265 1e-69 tr|Q5QM95|Q5QM95_ORYSJ Rubisco subunit binding-protein beta subu... 265 1e-69 tr|Q5QM94|Q5QM94_ORYSJ cDNA clone:J013144M15, full insert sequen... 265 1e-69 tr|A2ZWJ5|A2ZWJ5_ORYSJ Putative uncharacterized protein OS=Oryza... 265 1e-69 tr|A2WTS8|A2WTS8_ORYSI Putative uncharacterized protein OS=Oryza... 265 1e-69 tr|A7NVV9|A7NVV9_VITVI Chromosome chr5 scaffold_2, whole genome ... 265 2e-69 tr|A5AJP6|A5AJP6_VITVI Putative uncharacterized protein OS=Vitis... 265 2e-69 tr|B4FF31|B4FF31_MAIZE Putative uncharacterized protein OS=Zea m... 262 8e-69 tr|A7QMM3|A7QMM3_VITVI Chromosome chr19 scaffold_126, whole geno... 262 1e-68 tr|A5ACY6|A5ACY6_VITVI Putative uncharacterized protein OS=Vitis... 262 1e-68 tr|Q8W311|Q8W311_ORYSA Putative RNA-binding protein OS=Oryza sat... 258 1e-67 tr|Q10CW7|Q10CW7_ORYSJ Os03g0748000 protein OS=Oryza sativa subs... 258 1e-67 tr|B8AJV8|B8AJV8_ORYSI Putative uncharacterized protein OS=Oryza... 258 1e-67 tr|A7Q4I8|A7Q4I8_VITVI Chromosome chr9 scaffold_49, whole genome... 255 1e-66 tr|A5B5J0|A5B5J0_VITVI Putative uncharacterized protein OS=Vitis... 255 1e-66 tr|B8AMZ5|B8AMZ5_ORYSI Putative uncharacterized protein OS=Oryza... 253 5e-66 tr|Q10MA6|Q10MA6_ORYSJ Os03g0317000 protein OS=Oryza sativa subs... 253 7e-66 tr|A3AHC9|A3AHC9_ORYSJ Putative uncharacterized protein OS=Oryza... 253 7e-66 tr|Q9LDZ8|Q9LDZ8_ARATH Gb|AAF35955.1 OS=Arabidopsis thaliana PE=... 252 1e-65 tr|Q0WR25|Q0WR25_ARATH Putative uncharacterized protein At3g1306... 252 1e-65 tr|A7P0B6|A7P0B6_VITVI Chromosome chr6 scaffold_3, whole genome ... 251 1e-65 tr|Q0WPP4|Q0WPP4_ARATH Putative uncharacterized protein At3g1733... 247 3e-64 tr|Q9FNR2|Q9FNR2_ARATH Similarity to unknown protein (Putative u... 246 8e-64 tr|Q93ZP1|Q93ZP1_ARATH AT5g61020/maf19_20 OS=Arabidopsis thalian... 246 8e-64 tr|Q9LUT8|Q9LUT8_ARATH Arabidopsis thaliana genomic DNA, chromos... 244 2e-63 tr|Q1JPL5|Q1JPL5_ARATH At3g17330 OS=Arabidopsis thaliana PE=2 SV=1 244 2e-63 tr|A8MPR6|A8MPR6_ARATH Uncharacterized protein At3g17330.2 OS=Ar... 244 2e-63 tr|Q9FPE7|Q9FPE7_ARATH Putative uncharacterized protein At1g7927... 243 4e-63 tr|O64526|O64526_ARATH YUP8H12R.13 protein OS=Arabidopsis thalia... 243 4e-63 tr|A2YY04|A2YY04_ORYSI Putative uncharacterized protein OS=Oryza... 243 4e-63
>tr|Q5QM96|Q5QM96_ORYSJ cDNA clone:J013046L18, full insert sequence OS=Oryza sativa subsp. japonica GN=B1144G04.45-2 PE=2 SV=1 Length = 609
Score = 265 bits (677), Expect = 1e-69 Identities = 121/167 (72%), Positives = 140/167 (83%) Frame = +2
Query: 5 FFIIKSYSEDDVHKSIKYSVWSSTPNGNKRLDEAYRKAQEKSEAPSTLCPVFFFFSVNCS 184 FF+IKSYSEDD+HKSIKY+VW+STPNGNKRLD A++ AQE+ T CP+F FFSVN S Sbjct: 369 FFVIKSYSEDDIHKSIKYNVWASTPNGNKRLDNAFKLAQERVAEKGTKCPMFLFFSVNAS 428
Query: 185 GQFCGVAEMVGPVDFGKNMDFWLQGKWNGCLPVKWHIIKDVPNGHFRHIILSNNDNKPVT 364 GQFCGVAEMVGPVDF +NM+FW Q KWNG PVKWHIIKDVPN FRHIIL NN+NKPVT Sbjct: 429 GQFCGVAEMVGPVDFNRNMNFWQQDKWNGFFPVKWHIIKDVPNPQFRHIILENNENKPVT 488
Query: 365 HSRDTQEVHFHQGLEMLKIFKFFPTRTSLLDDFAFYDGRQRVLQERK 505 +SRDTQEV F QG EML IFK F +TS+LDDF FY+ RQ+V+Q+R+ Sbjct: 489 NSRDTQEVKFPQGSEMLNIFKNFSCKTSILDDFDFYENRQKVMQDRR 535
>tr|Q5QM95|Q5QM95_ORYSJ Rubisco subunit binding-protein beta subunit-like OS=Oryza sativa subsp. japonica GN=B1144G04.45-1 PE=4 SV=1 Length = 598
Score = 265 bits (677), Expect = 1e-69 Identities = 121/167 (72%), Positives = 140/167 (83%) Frame = +2
Query: 5 FFIIKSYSEDDVHKSIKYSVWSSTPNGNKRLDEAYRKAQEKSEAPSTLCPVFFFFSVNCS 184 FF+IKSYSEDD+HKSIKY+VW+STPNGNKRLD A++ AQE+ T CP+F FFSVN S Sbjct: 358 FFVIKSYSEDDIHKSIKYNVWASTPNGNKRLDNAFKLAQERVAEKGTKCPMFLFFSVNAS 417
Query: 185 GQFCGVAEMVGPVDFGKNMDFWLQGKWNGCLPVKWHIIKDVPNGHFRHIILSNNDNKPVT 364 GQFCGVAEMVGPVDF +NM+FW Q KWNG PVKWHIIKDVPN FRHIIL NN+NKPVT Sbjct: 418 GQFCGVAEMVGPVDFNRNMNFWQQDKWNGFFPVKWHIIKDVPNPQFRHIILENNENKPVT 477
Query: 365 HSRDTQEVHFHQGLEMLKIFKFFPTRTSLLDDFAFYDGRQRVLQERK 505 +SRDTQEV F QG EML IFK F +TS+LDDF FY+ RQ+V+Q+R+ Sbjct: 478 NSRDTQEVKFPQGSEMLNIFKNFSCKTSILDDFDFYENRQKVMQDRR 524
>tr|Q5QM94|Q5QM94_ORYSJ cDNA clone:J013144M15, full insert sequence OS=Oryza sativa subsp. japonica GN=B1144G04.45-3 PE=2 SV=1 Length = 458
Score = 265 bits (677), Expect = 1e-69 Identities = 121/167 (72%), Positives = 140/167 (83%) Frame = +2
Query: 5 FFIIKSYSEDDVHKSIKYSVWSSTPNGNKRLDEAYRKAQEKSEAPSTLCPVFFFFSVNCS 184 FF+IKSYSEDD+HKSIKY+VW+STPNGNKRLD A++ AQE+ T CP+F FFSVN S Sbjct: 218 FFVIKSYSEDDIHKSIKYNVWASTPNGNKRLDNAFKLAQERVAEKGTKCPMFLFFSVNAS 277
Query: 185 GQFCGVAEMVGPVDFGKNMDFWLQGKWNGCLPVKWHIIKDVPNGHFRHIILSNNDNKPVT 364 GQFCGVAEMVGPVDF +NM+FW Q KWNG PVKWHIIKDVPN FRHIIL NN+NKPVT Sbjct: 278 GQFCGVAEMVGPVDFNRNMNFWQQDKWNGFFPVKWHIIKDVPNPQFRHIILENNENKPVT 337
Query: 365 HSRDTQEVHFHQGLEMLKIFKFFPTRTSLLDDFAFYDGRQRVLQERK 505 +SRDTQEV F QG EML IFK F +TS+LDDF FY+ RQ+V+Q+R+ Sbjct: 338 NSRDTQEVKFPQGSEMLNIFKNFSCKTSILDDFDFYENRQKVMQDRR 384
>tr|A2ZWJ5|A2ZWJ5_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_002917 PE=4 SV=1 Length = 594
Score = 265 bits (677), Expect = 1e-69 Identities = 121/167 (72%), Positives = 140/167 (83%) Frame = +2
Query: 5 FFIIKSYSEDDVHKSIKYSVWSSTPNGNKRLDEAYRKAQEKSEAPSTLCPVFFFFSVNCS 184 FF+IKSYSEDD+HKSIKY+VW+STPNGNKRLD A++ AQE+ T CP+F FFSVN S Sbjct: 354 FFVIKSYSEDDIHKSIKYNVWASTPNGNKRLDNAFKLAQERVAEKGTKCPMFLFFSVNAS 413
Query: 185 GQFCGVAEMVGPVDFGKNMDFWLQGKWNGCLPVKWHIIKDVPNGHFRHIILSNNDNKPVT 364 GQFCGVAEMVGPVDF +NM+FW Q KWNG PVKWHIIKDVPN FRHIIL NN+NKPVT Sbjct: 414 GQFCGVAEMVGPVDFNRNMNFWQQDKWNGFFPVKWHIIKDVPNPQFRHIILENNENKPVT 473
Query: 365 HSRDTQEVHFHQGLEMLKIFKFFPTRTSLLDDFAFYDGRQRVLQERK 505 +SRDTQEV F QG EML IFK F +TS+LDDF FY+ RQ+V+Q+R+ Sbjct: 474 NSRDTQEVKFPQGSEMLNIFKNFSCKTSILDDFDFYENRQKVMQDRR 520
>tr|A2WTS8|A2WTS8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_03270 PE=4 SV=1 Length = 594
Score = 265 bits (677), Expect = 1e-69 Identities = 121/167 (72%), Positives = 140/167 (83%) Frame = +2
Query: 5 FFIIKSYSEDDVHKSIKYSVWSSTPNGNKRLDEAYRKAQEKSEAPSTLCPVFFFFSVNCS 184 FF+IKSYSEDD+HKSIKY+VW+STPNGNKRLD A++ AQE+ T CP+F FFSVN S Sbjct: 354 FFVIKSYSEDDIHKSIKYNVWASTPNGNKRLDNAFKLAQERVAEKGTKCPMFLFFSVNAS 413
Query: 185 GQFCGVAEMVGPVDFGKNMDFWLQGKWNGCLPVKWHIIKDVPNGHFRHIILSNNDNKPVT 364 GQFCGVAEMVGPVDF +NM+FW Q KWNG PVKWHIIKDVPN FRHIIL NN+NKPVT Sbjct: 414 GQFCGVAEMVGPVDFNRNMNFWQQDKWNGFFPVKWHIIKDVPNPQFRHIILENNENKPVT 473
Query: 365 HSRDTQEVHFHQGLEMLKIFKFFPTRTSLLDDFAFYDGRQRVLQERK 505 +SRDTQEV F QG EML IFK F +TS+LDDF FY+ RQ+V+Q+R+ Sbjct: 474 NSRDTQEVKFPQGSEMLNIFKNFSCKTSILDDFDFYENRQKVMQDRR 520
>tr|A7NVV9|A7NVV9_VITVI Chromosome chr5 scaffold_2, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00019682001 PE=4 SV=1 Length = 416
Score = 265 bits (676), Expect = 2e-69 Identities = 121/169 (71%), Positives = 141/169 (83%) Frame = +2
Query: 2 KFFIIKSYSEDDVHKSIKYSVWSSTPNGNKRLDEAYRKAQEKSEAPSTLCPVFFFFSVNC 181 KFF+IKSYSEDDVHKSIKY+VWSSTPNGNK+L+ AY AQ + CP+F FFSVN Sbjct: 78 KFFVIKSYSEDDVHKSIKYNVWSSTPNGNKKLENAYEDAQRIALGKRRGCPIFLFFSVNA 137
Query: 182 SGQFCGVAEMVGPVDFGKNMDFWLQGKWNGCLPVKWHIIKDVPNGHFRHIILSNNDNKPV 361 SGQFCGVAEM+GPVDF K+MDFW Q KW+G PVKWHIIKDVPN +FRHIIL NN+NKPV Sbjct: 138 SGQFCGVAEMIGPVDFHKDMDFWQQDKWSGSFPVKWHIIKDVPNTNFRHIILENNENKPV 197
Query: 362 THSRDTQEVHFHQGLEMLKIFKFFPTRTSLLDDFAFYDGRQRVLQERKS 508 T+SRDTQE+ F QGLEMLKIFK T+TSLLDDF +Y+ RQR++Q+ K+ Sbjct: 198 TNSRDTQEIRFKQGLEMLKIFKNHTTKTSLLDDFMYYENRQRIMQDEKT 246
>tr|A5AJP6|A5AJP6_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_038412 PE=4 SV=1 Length = 1960
Score = 265 bits (676), Expect = 2e-69 Identities = 121/169 (71%), Positives = 141/169 (83%) Frame = +2
Query: 2 KFFIIKSYSEDDVHKSIKYSVWSSTPNGNKRLDEAYRKAQEKSEAPSTLCPVFFFFSVNC 181 KFF+IKSYSEDDVHKSIKY+VWSSTPNGNK+L+ AY AQ + CP+F FFSVN Sbjct: 386 KFFVIKSYSEDDVHKSIKYNVWSSTPNGNKKLENAYEDAQRIALGKRRGCPIFLFFSVNA 445
Query: 182 SGQFCGVAEMVGPVDFGKNMDFWLQGKWNGCLPVKWHIIKDVPNGHFRHIILSNNDNKPV 361 SGQFCGVAEM+GPVDF K+MDFW Q KW+G PVKWHIIKDVPN +FRHIIL NN+NKPV Sbjct: 446 SGQFCGVAEMIGPVDFHKDMDFWQQDKWSGSFPVKWHIIKDVPNTNFRHIILENNENKPV 505
Query: 362 THSRDTQEVHFHQGLEMLKIFKFFPTRTSLLDDFAFYDGRQRVLQERKS 508 T+SRDTQE+ F QGLEMLKIFK T+TSLLDDF +Y+ RQR++Q+ K+ Sbjct: 506 TNSRDTQEIRFKQGLEMLKIFKNHTTKTSLLDDFMYYENRQRIMQDEKT 554
>tr|B4FF31|B4FF31_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 338
Score = 262 bits (670), Expect = 8e-69 Identities = 121/167 (72%), Positives = 137/167 (82%) Frame = +2
Query: 5 FFIIKSYSEDDVHKSIKYSVWSSTPNGNKRLDEAYRKAQEKSEAPSTLCPVFFFFSVNCS 184 FF+IKSYSEDD+HKSIKY+VW+STPNGNKRLD AYR AQE+ T CPVF FFSVN S Sbjct: 103 FFVIKSYSEDDIHKSIKYNVWASTPNGNKRLDNAYRLAQERMAEKGTKCPVFLFFSVNAS 162
Query: 185 GQFCGVAEMVGPVDFGKNMDFWLQGKWNGCLPVKWHIIKDVPNGHFRHIILSNNDNKPVT 364 QFCGVAEMVGPVDF +NM+FW Q KWNG VKWHIIKDVPN FRHIIL NN+NKPVT Sbjct: 163 DQFCGVAEMVGPVDFNRNMNFWQQDKWNGFFSVKWHIIKDVPNPQFRHIILENNENKPVT 222
Query: 365 HSRDTQEVHFHQGLEMLKIFKFFPTRTSLLDDFAFYDGRQRVLQERK 505 +SRDTQEV F QG EML IFK F + S+LDDF FY+ RQ+V+Q+R+ Sbjct: 223 NSRDTQEVKFSQGTEMLNIFKNFTCKASILDDFDFYENRQKVMQDRR 269
>tr|A7QMM3|A7QMM3_VITVI Chromosome chr19 scaffold_126, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00002122001 PE=4 SV=1 Length = 269
Score = 262 bits (669), Expect = 1e-68 Identities = 119/167 (71%), Positives = 141/167 (84%) Frame = +2
Query: 5 FFIIKSYSEDDVHKSIKYSVWSSTPNGNKRLDEAYRKAQEKSEAPSTLCPVFFFFSVNCS 184 FF+IKSYSEDD+HKSIKY+VW+STPNGNKRLD AY++A+E+ + CPVF FFSVN S Sbjct: 73 FFVIKSYSEDDIHKSIKYNVWASTPNGNKRLDGAYQEAKERMGDRGSKCPVFLFFSVNAS 132
Query: 185 GQFCGVAEMVGPVDFGKNMDFWLQGKWNGCLPVKWHIIKDVPNGHFRHIILSNNDNKPVT 364 GQFCGVAEM+G VDF KNMDFW Q KWNG PVKWHIIKDVPN RHIIL NNDNKPVT Sbjct: 133 GQFCGVAEMIGRVDFNKNMDFWQQDKWNGFFPVKWHIIKDVPNPQLRHIILENNDNKPVT 192
Query: 365 HSRDTQEVHFHQGLEMLKIFKFFPTRTSLLDDFAFYDGRQRVLQERK 505 +SRDTQEV F QG+E+L IFK + ++TS+LDDF FY+ RQ+V+Q++K Sbjct: 193 NSRDTQEVRFPQGIEILNIFKNYVSKTSILDDFDFYESRQKVMQDKK 239
>tr|A5ACY6|A5ACY6_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_005095 PE=4 SV=1 Length = 592
Score = 262 bits (669), Expect = 1e-68 Identities = 119/167 (71%), Positives = 141/167 (84%) Frame = +2
Query: 5 FFIIKSYSEDDVHKSIKYSVWSSTPNGNKRLDEAYRKAQEKSEAPSTLCPVFFFFSVNCS 184 FF+IKSYSEDD+HKSIKY+VW+STPNGNKRLD AY++A+E+ + CPVF FFSVN S Sbjct: 367 FFVIKSYSEDDIHKSIKYNVWASTPNGNKRLDGAYQEAKERMGDRGSKCPVFLFFSVNAS 426
Query: 185 GQFCGVAEMVGPVDFGKNMDFWLQGKWNGCLPVKWHIIKDVPNGHFRHIILSNNDNKPVT 364 GQFCGVAEM+G VDF KNMDFW Q KWNG PVKWHIIKDVPN RHIIL NNDNKPVT Sbjct: 427 GQFCGVAEMIGRVDFNKNMDFWQQDKWNGFFPVKWHIIKDVPNPQLRHIILENNDNKPVT 486
Query: 365 HSRDTQEVHFHQGLEMLKIFKFFPTRTSLLDDFAFYDGRQRVLQERK 505 +SRDTQEV F QG+E+L IFK + ++TS+LDDF FY+ RQ+V+Q++K Sbjct: 487 NSRDTQEVRFPQGIEILNIFKNYVSKTSILDDFDFYESRQKVMQDKK 533
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