DK958091 |
Clone id |
TST39A01NGRL0030_B12 |
Library |
TST39 |
Length |
648 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0030_B12. 5' end sequence. |
Accession |
DK958091 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL439Contig1 |
Sequence |
TCCAAGGGGACGATATAGCAGAGCTCGGTTTCATTATCCGAGCACATGGCGGCCGCCTCT TGTTCTCGCTGCGCGATGCAAGCAGCCTCTTCCTACGTGGCAGCAGTAGCAACATCGCCA TCAGTATCTTCGGCATCATCATCCCTTCCTGTAGCCCGCTCAGCAGCGAATGTGATCCCT GGGTCGCAGAAATCTCGCCTTCATGCAACTTTTCTTCAAAGATCTCCTGTGCCTGCTCGT CCTCATGTATTGAAAAGCCCTTGCTGTGCTGTCTCAGTTGGGATCTCCTCCGAGCCAGAG ACCGCAGTTGAAGGGGTCAACATAGCTGAGGATGTTACCCAGCTTATAGGGAAAACTCCC ATGGTTTACCTGAATAAGGTGACAGATGGATGTGGTGGCTATATTGCAGCTAAACTGGAG TCCATGGAACCTTGCTCTAGTGTTAAAGACAGGATTGGGAGAAGTATGATTGAAGATGCC GAATCAAAAGGGCTTATTGTCCCCGGAAAGAGTGTTTTAGTTGAGCCTACTAGTGGAAAC ACGGGTATTGGTTTAGCTTTTATAGCTGCGTCTAAAGGCTATAAGCTAATCCTTACAATG CCTGCATCAATGAGTCTGGAACGGCGTGTGCTACTGAAGGCGTTTGGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P31300 |
Definition |
sp|P31300|CYSKP_CAPAN Cysteine synthase, chloroplastic/chromoplastic OS=Capsicum annuum |
Align length |
129 |
Score (bit) |
191.0 |
E-value |
2.0e-48 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK958091|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0030_B12, 5' (648 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P31300|CYSKP_CAPAN Cysteine synthase, chloroplastic/chromopla... 191 2e-48 sp|O81155|CYSKP_SOLTU Cysteine synthase, chloroplastic/chromopla... 191 3e-48 sp|P47999|CYSKP_ARATH Cysteine synthase, chloroplastic/chromopla... 189 8e-48 sp|P32260|CYSKP_SPIOL Cysteine synthase, chloroplastic/chromopla... 186 7e-47 sp|Q9XEA6|CYSK1_ORYSJ Cysteine synthase OS=Oryza sativa subsp. j... 186 9e-47 sp|P38076|CYSK_WHEAT Cysteine synthase OS=Triticum aestivum GN=C... 186 1e-46 sp|Q43725|CYSKM_ARATH Cysteine synthase, mitochondrial OS=Arabid... 183 8e-46 sp|Q9XEA8|CYSK2_ORYSJ Cysteine synthase OS=Oryza sativa subsp. j... 183 8e-46 sp|P80608|CYSK_MAIZE Cysteine synthase OS=Zea mays PE=1 SV=2 179 1e-44 sp|Q00834|CYSK_SPIOL Cysteine synthase OS=Spinacia oleracea PE=1... 176 9e-44 sp|O81154|CYSK_SOLTU Cysteine synthase OS=Solanum tuberosum PE=2... 175 2e-43 sp|Q43317|CYSK_CITLA Cysteine synthase OS=Citrullus lanatus PE=2... 174 3e-43 sp|O23735|CYSK2_BRAJU Cysteine synthase OS=Brassica juncea PE=2 ... 174 5e-43 sp|O22682|CYSK4_ARATH Probable cysteine synthase, chloroplastic ... 172 1e-42 sp|O23733|CYSK1_BRAJU Cysteine synthase OS=Brassica juncea PE=2 ... 172 1e-42 sp|P47998|CYSK1_ARATH Cysteine synthase OS=Arabidopsis thaliana ... 172 2e-42 sp|P73410|CYSK_SYNY3 Cysteine synthase OS=Synechocystis sp. (str... 141 3e-33 sp|P0A534|CYSK_MYCTU Cysteine synthase A OS=Mycobacterium tuberc... 132 2e-30 sp|P0A535|CYSK_MYCBO Cysteine synthase A OS=Mycobacterium bovis ... 132 2e-30 sp|O32978|CYSK_MYCLE Cysteine synthase A OS=Mycobacterium leprae... 130 5e-30 sp|Q7DDL5|CYSK_NEIMB Cysteine synthase OS=Neisseria meningitidis... 120 5e-27 sp|P37887|CYSK_BACSU Serine-dependent cysteine synthase OS=Bacil... 119 1e-26 sp|Q59966|SRPG_SYNE7 Cysteine synthase, plasmid OS=Synechococcus... 119 2e-26 sp|Q5XAQ3|CYSK_STRP6 Cysteine synthase OS=Streptococcus pyogenes... 119 2e-26 sp|Q8CMT6|CYSK_STAES Cysteine synthase OS=Staphylococcus epiderm... 117 7e-26 sp|Q5HRP1|CYSK_STAEQ Cysteine synthase OS=Staphylococcus epiderm... 117 7e-26 sp|P63872|CYSK_STAAW Cysteine synthase OS=Staphylococcus aureus ... 116 9e-26 sp|Q6GBX5|CYSK_STAAS Cysteine synthase OS=Staphylococcus aureus ... 116 9e-26 sp|Q6GJF8|CYSK_STAAR Cysteine synthase OS=Staphylococcus aureus ... 116 9e-26 sp|P63871|CYSK_STAAN Cysteine synthase OS=Staphylococcus aureus ... 116 9e-26
>sp|P31300|CYSKP_CAPAN Cysteine synthase, chloroplastic/chromoplastic OS=Capsicum annuum PE=2 SV=1 Length = 374
Score = 191 bits (486), Expect = 2e-48 Identities = 102/129 (79%), Positives = 108/129 (83%) Frame = +1
Query: 262 CCAVSVGISSEPETAVEGVNIAEDVTQLIGKTPMVYLNKVTDGCGGYIAAKLESMEPCSS 441 C AVSV S E +EG+NIAEDVTQLIG TPMVYLN + GC IAAKLE MEPC S Sbjct: 49 CKAVSVQTKSPTE--IEGLNIAEDVTQLIGNTPMVYLNTIVKGCVANIAAKLEIMEPCCS 106
Query: 442 VKDRIGRSMIEDAESKGLIVPGKSVLVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLE 621 VKDRIG SMI DAE KGLI PGK+VLVEPTSGNTGIGLAFIAAS+GYKLILTMPASMSLE Sbjct: 107 VKDRIGFSMISDAEEKGLISPGKTVLVEPTSGNTGIGLAFIAASRGYKLILTMPASMSLE 166
Query: 622 RRVLLKAFG 648 RRV+LKAFG Sbjct: 167 RRVILKAFG 175
>sp|O81155|CYSKP_SOLTU Cysteine synthase, chloroplastic/chromoplastic OS=Solanum tuberosum PE=2 SV=1 Length = 386
Score = 191 bits (485), Expect = 3e-48 Identities = 102/129 (79%), Positives = 108/129 (83%) Frame = +1
Query: 262 CCAVSVGISSEPETAVEGVNIAEDVTQLIGKTPMVYLNKVTDGCGGYIAAKLESMEPCSS 441 C AVSV S E +EG+NIAEDVTQLIG TPMVYLN + GC IAAKLE MEPC S Sbjct: 51 CKAVSVPTKSSTE--IEGLNIAEDVTQLIGNTPMVYLNTIAKGCVANIAAKLEIMEPCCS 108
Query: 442 VKDRIGRSMIEDAESKGLIVPGKSVLVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLE 621 VKDRIG SMI DAE KGLI PGK+VLVEPTSGNTGIGLAFIAAS+GYKLILTMPASMSLE Sbjct: 109 VKDRIGFSMIVDAEEKGLISPGKTVLVEPTSGNTGIGLAFIAASRGYKLILTMPASMSLE 168
Query: 622 RRVLLKAFG 648 RRV+LKAFG Sbjct: 169 RRVILKAFG 177
>sp|P47999|CYSKP_ARATH Cysteine synthase, chloroplastic/chromoplastic OS=Arabidopsis thaliana GN=OASB PE=1 SV=2 Length = 392
Score = 189 bits (481), Expect = 8e-48 Identities = 98/126 (77%), Positives = 105/126 (83%) Frame = +1
Query: 271 VSVGISSEPETAVEGVNIAEDVTQLIGKTPMVYLNKVTDGCGGYIAAKLESMEPCSSVKD 450 V +S +PE VEG+NIA++ QLIGKTPMVYLN V GC +AAKLE MEPC SVKD Sbjct: 58 VCKAVSIKPEAGVEGLNIADNAAQLIGKTPMVYLNNVVKGCVASVAAKLEIMEPCCSVKD 117
Query: 451 RIGRSMIEDAESKGLIVPGKSVLVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRV 630 RIG SMI DAE KGLI PGKSVLVE TSGNTGIGLAFIAASKGYKLILTMPASMSLERRV Sbjct: 118 RIGYSMITDAEEKGLITPGKSVLVESTSGNTGIGLAFIAASKGYKLILTMPASMSLERRV 177
Query: 631 LLKAFG 648 LL+AFG Sbjct: 178 LLRAFG 183
>sp|P32260|CYSKP_SPIOL Cysteine synthase, chloroplastic/chromoplastic OS=Spinacia oleracea GN=CYSK PE=1 SV=2 Length = 383
Score = 186 bits (473), Expect = 7e-47 Identities = 96/134 (71%), Positives = 111/134 (82%) Frame = +1
Query: 247 VLKSPCCAVSVGISSEPETAVEGVNIAEDVTQLIGKTPMVYLNKVTDGCGGYIAAKLESM 426 V SP +V +S P + +EG+NIAEDV+QLIGKTPMVYLN V+ G IAAKLESM Sbjct: 44 VSSSPITCKAVSLS--PPSTIEGLNIAEDVSQLIGKTPMVYLNNVSKGSVANIAAKLESM 101
Query: 427 EPCSSVKDRIGRSMIEDAESKGLIVPGKSVLVEPTSGNTGIGLAFIAASKGYKLILTMPA 606 EPC SVKDRIG SMI+DAE KG+I PGK+ LVEPTSGNTGIGLAFIAA++GYK+ LTMPA Sbjct: 102 EPCCSVKDRIGYSMIDDAEQKGVITPGKTTLVEPTSGNTGIGLAFIAAARGYKITLTMPA 161
Query: 607 SMSLERRVLLKAFG 648 SMS+ERRV+LKAFG Sbjct: 162 SMSMERRVILKAFG 175
>sp|Q9XEA6|CYSK1_ORYSJ Cysteine synthase OS=Oryza sativa subsp. japonica GN=RCS1 PE=2 SV=2 Length = 321
Score = 186 bits (472), Expect = 9e-47 Identities = 90/112 (80%), Positives = 103/112 (91%) Frame = +1
Query: 313 GVNIAEDVTQLIGKTPMVYLNKVTDGCGGYIAAKLESMEPCSSVKDRIGRSMIEDAESKG 492 G IA+DVT+LIG TP+VYLN+VTDGC G +AAKLESMEPCSSVKDRIG SMI DAE KG Sbjct: 2 GETIAKDVTELIGNTPLVYLNRVTDGCVGRVAAKLESMEPCSSVKDRIGYSMITDAEEKG 61
Query: 493 LIVPGKSVLVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFG 648 LI PGKSVL+EPTSGNTGIGLAF+AA+KGY+L+LTMPASMS+ERR++LKAFG Sbjct: 62 LITPGKSVLIEPTSGNTGIGLAFMAAAKGYRLVLTMPASMSMERRIILKAFG 113
>sp|P38076|CYSK_WHEAT Cysteine synthase OS=Triticum aestivum GN=CYS1 PE=2 SV=1 Length = 325
Score = 186 bits (471), Expect = 1e-46 Identities = 90/109 (82%), Positives = 102/109 (93%) Frame = +1
Query: 322 IAEDVTQLIGKTPMVYLNKVTDGCGGYIAAKLESMEPCSSVKDRIGRSMIEDAESKGLIV 501 IA+DVT+LIG TP+VYLNKVTDGC G +AAKLESMEPCSSVKDRIG SMI DAE KG IV Sbjct: 9 IAKDVTELIGNTPLVYLNKVTDGCVGRVAAKLESMEPCSSVKDRIGYSMITDAEEKGFIV 68
Query: 502 PGKSVLVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFG 648 PGKSVL+EPTSGNTGIGLAF+AA+KGY+L+LTMPASMS+ERR++LKAFG Sbjct: 69 PGKSVLIEPTSGNTGIGLAFMAAAKGYRLVLTMPASMSMERRIILKAFG 117
>sp|Q43725|CYSKM_ARATH Cysteine synthase, mitochondrial OS=Arabidopsis thaliana GN=OASC PE=1 SV=3 Length = 430
Score = 183 bits (464), Expect = 8e-46 Identities = 92/117 (78%), Positives = 102/117 (87%) Frame = +1
Query: 298 ETAVEGVNIAEDVTQLIGKTPMVYLNKVTDGCGGYIAAKLESMEPCSSVKDRIGRSMIED 477 ET +G+NIA++V+QLIGKTPMVYLN + GC IAAKLE MEPC SVKDRIG SM+ D Sbjct: 105 ETGPDGLNIADNVSQLIGKTPMVYLNSIAKGCVANIAAKLEIMEPCCSVKDRIGYSMVTD 164
Query: 478 AESKGLIVPGKSVLVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFG 648 AE KG I PGKSVLVEPTSGNTGIGLAFIAAS+GY+LILTMPASMS+ERRVLLKAFG Sbjct: 165 AEQKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFG 221
>sp|Q9XEA8|CYSK2_ORYSJ Cysteine synthase OS=Oryza sativa subsp. japonica GN=RCS3 PE=2 SV=1 Length = 325
Score = 183 bits (464), Expect = 8e-46 Identities = 92/115 (80%), Positives = 100/115 (86%) Frame = +1
Query: 304 AVEGVNIAEDVTQLIGKTPMVYLNKVTDGCGGYIAAKLESMEPCSSVKDRIGRSMIEDAE 483 A G +IA DVT LIG TP+VYLNKV DGC IAAKLE MEPCSSVKDRIG SMI DAE Sbjct: 2 AESGQSIASDVTALIGNTPLVYLNKVVDGCEAQIAAKLEIMEPCSSVKDRIGYSMITDAE 61
Query: 484 SKGLIVPGKSVLVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFG 648 KGLI PGKSVL+EPTSGNTGIGLAF+AA+KGYKLILTMPASMS+ERR++LKAFG Sbjct: 62 EKGLITPGKSVLIEPTSGNTGIGLAFMAAAKGYKLILTMPASMSMERRIILKAFG 116
>sp|P80608|CYSK_MAIZE Cysteine synthase OS=Zea mays PE=1 SV=2 Length = 325
Score = 179 bits (454), Expect = 1e-44 Identities = 89/110 (80%), Positives = 99/110 (90%) Frame = +1
Query: 319 NIAEDVTQLIGKTPMVYLNKVTDGCGGYIAAKLESMEPCSSVKDRIGRSMIEDAESKGLI 498 +IA+DVT+LIG TP+VYLNKVTDGC G AKLESMEPCSSVKDRIG SMI DAE KGLI Sbjct: 7 SIAKDVTELIGNTPLVYLNKVTDGCVGRSRAKLESMEPCSSVKDRIGYSMITDAEEKGLI 66
Query: 499 VPGKSVLVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFG 648 PG SVL+EPTSGNTGIGLAF+AA+KGYKL LTMPASMS+ERR++LKAFG Sbjct: 67 TPGVSVLIEPTSGNTGIGLAFMAAAKGYKLTLTMPASMSMERRIILKAFG 116
>sp|Q00834|CYSK_SPIOL Cysteine synthase OS=Spinacia oleracea PE=1 SV=1 Length = 325
Score = 176 bits (446), Expect = 9e-44 Identities = 87/109 (79%), Positives = 97/109 (88%) Frame = +1
Query: 322 IAEDVTQLIGKTPMVYLNKVTDGCGGYIAAKLESMEPCSSVKDRIGRSMIEDAESKGLIV 501 IA+DVT+LIGKTP+VYLN V DGC +AAKLE MEPCSSVKDRIG SMI DAE GLI Sbjct: 8 IAKDVTELIGKTPLVYLNTVADGCVARVAAKLEGMEPCSSVKDRIGFSMITDAEKSGLIT 67
Query: 502 PGKSVLVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFG 648 PG+SVL+EPTSGNTGIGLAFIAA+KGYKLI+TMPASMSLERR +L+AFG Sbjct: 68 PGESVLIEPTSGNTGIGLAFIAAAKGYKLIITMPASMSLERRTILRAFG 116
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q3L197 |
Definition |
tr|Q3L197|Q3L197_ALLSA Cysteine synthase OS=Allium sativum |
Align length |
149 |
Score (bit) |
201.0 |
E-value |
3.0e-50 |
Report |
|