DK958098
Clone id TST39A01NGRL0030_B19
Library
Length 601
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0030_B19. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
CTCTCCTGCTGAAGCGACTTTGGTGGCGGGGACGAGCCGGGGAGCATGGCATCTCTTGTG
AAAGCTCCTGCATCCCCGTGCACCGCTTCCACCACTGCTCATTTCCAGCAGAGTCTACCG
CAGCAGAGTCGGAGTTTGCCATTCTTGAGTCGCTCTGGCACAGGCTTAGCACTCTCCTCC
AGTGCCTATCAGTGTAGCAGTTCAAAGTCTTCATTTGTGGGACTCCAAACAAAGCTTGAG
AATCTCATCTTGCATTCGTCTTCAGCCACTGGATCGGGCAGTACCCGGGCAGTAGTTTCC
ATGTCAAAACCAGTTATTCAGTTTATCAAAGGCGTGAACGAGCAAACTATTCCTGATGTT
TCTCTTACAAGATCTAAAGATGGGACTAATGGAGTTGCAACTTTTAGCTTTGAGCAGCCG
TCAGTTTTTGATGCTGCTGGAGAGTTGAGGGACATCACAGGGCTTTTCATGCAAGATGAA
GAGGGTGTTCTTTCAACAGTTGATGTCAGTGCCAAGTTTGTTAACGGAAAACCTTCAAGG
ATTGAGGCTCGGTACATAATGAGAACATTGAAGGACTGGGACAGGTTCATGCGCTTCATG
G
■■Homology search results ■■ -
sp_hit_id Q0JG75
Definition sp|Q0JG75|PSB28_ORYSJ Photosystem II reaction center PSB28 protein, chloroplastic OS=Oryza sativa subsp. japonica
Align length 103
Score (bit) 154.0
E-value 4.0e-37
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK958098|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0030_B19, 5'
(601 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q0JG75|PSB28_ORYSJ Photosystem II reaction center PSB28 prote... 154 4e-37
sp|Q8W0Y8|PSB28_ARATH Photosystem II reaction center PSB28 prote... 145 2e-34
sp|Q00UI6|PSB28_OSTTA Photosystem II reaction center psb28 prote... 126 1e-28
sp|O78418|PSB28_GUITH Photosystem II reaction center psb28 prote... 122 2e-27
sp|Q6B8Z7|PSB28_GRATL Photosystem II reaction center psb28 prote... 119 9e-27
sp|A0T0H5|PSB28_PHATR Photosystem II reaction center psb28 prote... 117 4e-26
sp|B0CE32|PSB28_ACAM1 Photosystem II reaction center psb28 prote... 116 8e-26
sp|Q1XDE0|PSB28_PORYE Photosystem II reaction center psb28 prote... 115 2e-25
sp|P51347|PSB28_PORPU Photosystem II reaction center psb28 prote... 115 2e-25
sp|P48264|PSB28_CYAPA Photosystem II reaction center psb28 prote... 115 2e-25
sp|A0T0W9|PSB28_THAPS Photosystem II reaction center psb28 prote... 114 5e-25
sp|Q5MZB9|PSB28_SYNP6 Photosystem II reaction center psb28 prote... 114 5e-25
sp|Q31ML0|PSB28_SYNE7 Photosystem II reaction center psb28 prote... 114 5e-25
sp|P49508|PSB28_ODOSI Photosystem II reaction center psb28 prote... 113 6e-25
sp|Q9TLZ2|PSB28_CYACA Photosystem II reaction center psb28 prote... 111 3e-24
sp|Q8DLJ8|PSB28_THEEB Photosystem II reaction center psb28 prote... 109 1e-23
sp|Q85G21|PSB28_CYAME Photosystem II reaction center psb28 prote... 105 1e-22
sp|Q3AKD0|PSB28_SYNSC Photosystem II reaction center psb28 prote... 105 2e-22
sp|Q0I9T4|PSB28_SYNS3 Photosystem II reaction center psb28 prote... 104 4e-22
sp|Q3MFL9|PSB28_ANAVT Photosystem II reaction center psb28 prote... 103 5e-22
sp|A5GLG6|PSB28_SYNPW Photosystem II reaction center psb28 prote... 103 7e-22
sp|Q8YYP5|PSB28_ANASP Photosystem II reaction center psb28 prote... 103 9e-22
sp|Q7U7C0|PSB28_SYNPX Photosystem II reaction center psb28 prote... 102 1e-21
sp|Q112E8|PSB28_TRIEI Photosystem II reaction center psb28 prote... 100 4e-21
sp|A2CA72|PSB28_PROM3 Photosystem II reaction center psb28 prote... 100 4e-21
sp|Q7TV11|PSB28_PROMM Photosystem II reaction center psb28 prote... 99 1e-20
sp|Q3AXG3|PSB28_SYNS9 Photosystem II reaction center psb28 prote... 97 5e-20
sp|Q55356|PSB28_SYNY3 Photosystem II reaction center psb28 prote... 95 2e-19
sp|Q7VCG9|PSB28_PROMA Photosystem II reaction center psb28 prote... 94 7e-19
sp|A2BWQ5|PSB28_PROM5 Photosystem II reaction center psb28 prote... 91 3e-18

>sp|Q0JG75|PSB28_ORYSJ Photosystem II reaction center PSB28 protein,
chloroplastic OS=Oryza sativa subsp. japonica GN=PSB28
PE=2 SV=2
Length = 180

Score = 154 bits (388), Expect = 4e-37
Identities = 71/103 (68%), Positives = 90/103 (87%)
Frame = +1

Query: 292 VVSMSKPVIQFIKGVNEQTIPDVSLTRSKDGTNGVATFSFEQPSVFDAAGELRDITGLFM 471
V+ ++P IQFI+G +EQTIPDV LT+S+DGTNGVA F+F+QPSVFD++ EL DITG +M
Sbjct: 64 VMMAARPAIQFIQGTDEQTIPDVRLTKSRDGTNGVAIFTFDQPSVFDSSAELGDITGFYM 123

Query: 472 QDEEGVLSTVDVSAKFVNGKPSRIEARYIMRTLKDWDRFMRFM 600
D+EGVL +VDVSAKFVNGKP+ IEA+Y+MRT ++WDRFMRFM
Sbjct: 124 IDDEGVLQSVDVSAKFVNGKPALIEAKYVMRTPREWDRFMRFM 166


>sp|Q8W0Y8|PSB28_ARATH Photosystem II reaction center PSB28 protein,
chloroplastic OS=Arabidopsis thaliana GN=PSB28 PE=1 SV=1
Length = 183

Score = 145 bits (366), Expect = 2e-34
Identities = 66/103 (64%), Positives = 87/103 (84%)
Frame = +1

Query: 292 VVSMSKPVIQFIKGVNEQTIPDVSLTRSKDGTNGVATFSFEQPSVFDAAGELRDITGLFM 471
+ M KP +QFI+G +E TIPDV LTRS+DG+NG+A FSF+QPSVFD++GE+ +ITGL+M
Sbjct: 66 ITMMVKPALQFIQGTDEMTIPDVKLTRSRDGSNGMALFSFDQPSVFDSSGEVGEITGLYM 125

Query: 472 QDEEGVLSTVDVSAKFVNGKPSRIEARYIMRTLKDWDRFMRFM 600
DEEGV+ + DV+A+FVNGKP I A++IMR+ K+WDRFMRFM
Sbjct: 126 IDEEGVIQSTDVNARFVNGKPEGIVAKHIMRSPKEWDRFMRFM 168


>sp|Q00UI6|PSB28_OSTTA Photosystem II reaction center psb28 protein,
chloroplastic OS=Ostreococcus tauri GN=psb28 PE=3 SV=1
Length = 147

Score = 126 bits (316), Expect = 1e-28
Identities = 61/95 (64%), Positives = 74/95 (77%)
Frame = +1

Query: 316 IQFIKGVNEQTIPDVSLTRSKDGTNGVATFSFEQPSVFDAAGELRDITGLFMQDEEGVLS 495
IQF+KG NE +P+V LTRSKDG+NG A F F P VF+ DITG+F+ DEEG +S
Sbjct: 41 IQFVKGQNETAVPEVRLTRSKDGSNGTAFFIFSDPDVFENGQG--DITGMFLTDEEGEMS 98

Query: 496 TVDVSAKFVNGKPSRIEARYIMRTLKDWDRFMRFM 600
TVDV+AKFVNGKP+ IEARY+M+T DW+RFMRFM
Sbjct: 99 TVDVNAKFVNGKPTGIEARYVMKTEADWNRFMRFM 133


>sp|O78418|PSB28_GUITH Photosystem II reaction center psb28 protein
OS=Guillardia theta GN=psb28 PE=3 SV=1
Length = 116

Score = 122 bits (305), Expect = 2e-27
Identities = 60/97 (61%), Positives = 75/97 (77%), Gaps = 1/97 (1%)
Frame = +1

Query: 313 VIQFIKGVNEQTIPDVSLTRSKDGTNGVATFSFEQPSVFDAAGELR-DITGLFMQDEEGV 489
VIQFI+GVNE IPDV LTRS+DG+ G ATF F P V +A ++ +ITG+++ DEEG
Sbjct: 3 VIQFIQGVNEDVIPDVRLTRSRDGSTGTATFRFANPKVLEAQSSVKGNITGMYLIDEEGQ 62

Query: 490 LSTVDVSAKFVNGKPSRIEARYIMRTLKDWDRFMRFM 600
L T DV+A+FVNGKP IEA YIM++ +DWDRFMRFM
Sbjct: 63 LVTRDVNARFVNGKPQGIEAVYIMQSKEDWDRFMRFM 99


>sp|Q6B8Z7|PSB28_GRATL Photosystem II reaction center psb28 protein
OS=Gracilaria tenuistipitata var. liui GN=psb28 PE=3
SV=1
Length = 114

Score = 119 bits (299), Expect = 9e-27
Identities = 56/97 (57%), Positives = 75/97 (77%), Gaps = 1/97 (1%)
Frame = +1

Query: 313 VIQFIKGVNEQTIPDVSLTRSKDGTNGVATFSFEQPSVFDAAGELR-DITGLFMQDEEGV 489
VIQFIKG+NE + DVSLTRS+DG+ G ATF F P + + E + DITG++++D+EG
Sbjct: 3 VIQFIKGINETVVADVSLTRSRDGSKGTATFRFNNPDILKSGMEDKGDITGMYLKDDEGE 62

Query: 490 LSTVDVSAKFVNGKPSRIEARYIMRTLKDWDRFMRFM 600
L T DVSAKF+NGKP +EA YI+++ ++WDRFMRFM
Sbjct: 63 LMTRDVSAKFINGKPQAVEAIYIIKSPQEWDRFMRFM 99


>sp|A0T0H5|PSB28_PHATR Photosystem II reaction center psb28 protein
OS=Phaeodactylum tricornutum GN=psb28 PE=3 SV=1
Length = 115

Score = 117 bits (293), Expect = 4e-26
Identities = 55/96 (57%), Positives = 75/96 (78%), Gaps = 1/96 (1%)
Frame = +1

Query: 316 IQFIKGVNEQTIPDVSLTRSKDGTNGVATFSFEQPSVFD-AAGELRDITGLFMQDEEGVL 492
IQFIKG++E+ +PDV LTRSKDG+ G ATF F+ P++ D + +ITG+++ DEEG+L
Sbjct: 5 IQFIKGLDEKVLPDVRLTRSKDGSTGTATFRFKNPNILDKTTAKEGEITGMYLIDEEGIL 64

Query: 493 STVDVSAKFVNGKPSRIEARYIMRTLKDWDRFMRFM 600
T DV+A+FVNGKP IE+ YIM++ + WDRFMRFM
Sbjct: 65 ETRDVNARFVNGKPEAIESIYIMKSPEAWDRFMRFM 100


>sp|B0CE32|PSB28_ACAM1 Photosystem II reaction center psb28 protein
OS=Acaryochloris marina (strain MBIC 11017) GN=psb28
PE=3 SV=1
Length = 111

Score = 116 bits (291), Expect = 8e-26
Identities = 57/95 (60%), Positives = 77/95 (81%)
Frame = +1

Query: 316 IQFIKGVNEQTIPDVSLTRSKDGTNGVATFSFEQPSVFDAAGELRDITGLFMQDEEGVLS 495
IQFI+GV+E+ IPDV LTR+KDG++G A F FE P++ G+L ++ G+++QDEEG L+
Sbjct: 5 IQFIRGVDEEVIPDVRLTRAKDGSSGRAIFYFENPNLIQE-GKL-EVMGMYLQDEEGELT 62

Query: 496 TVDVSAKFVNGKPSRIEARYIMRTLKDWDRFMRFM 600
T+DVSAKFVNGKP IEA Y M++ ++WDRFMRFM
Sbjct: 63 TLDVSAKFVNGKPHAIEANYDMKSEEEWDRFMRFM 97


>sp|Q1XDE0|PSB28_PORYE Photosystem II reaction center psb28 protein
OS=Porphyra yezoensis GN=psb28 PE=3 SV=1
Length = 115

Score = 115 bits (288), Expect = 2e-25
Identities = 52/96 (54%), Positives = 73/96 (76%), Gaps = 1/96 (1%)
Frame = +1

Query: 316 IQFIKGVNEQTIPDVSLTRSKDGTNGVATFSFEQPSVFDAA-GELRDITGLFMQDEEGVL 492
IQFI+G+NE+ +PDV LTRS+DG+ G ATF F P + DA+ + +ITG+++ D EG +
Sbjct: 4 IQFIQGINEEVVPDVRLTRSRDGSTGTATFRFTNPKILDASMADKGEITGMYLMDTEGQI 63

Query: 493 STVDVSAKFVNGKPSRIEARYIMRTLKDWDRFMRFM 600
T DV+AKF+NGKP IEA +++++ DWDRFMRFM
Sbjct: 64 ITRDVNAKFINGKPQAIEAVHVIKSPDDWDRFMRFM 99


>sp|P51347|PSB28_PORPU Photosystem II reaction center psb28 protein
OS=Porphyra purpurea GN=psb28 PE=3 SV=1
Length = 115

Score = 115 bits (288), Expect = 2e-25
Identities = 52/96 (54%), Positives = 73/96 (76%), Gaps = 1/96 (1%)
Frame = +1

Query: 316 IQFIKGVNEQTIPDVSLTRSKDGTNGVATFSFEQPSVFDAA-GELRDITGLFMQDEEGVL 492
IQFI+G+NE+ +PDV LTRS+DG+ G ATF F P + DA+ + +ITG+++ D EG +
Sbjct: 4 IQFIQGINEEVVPDVRLTRSRDGSTGTATFRFTNPKILDASMADKGEITGMYLMDTEGQI 63

Query: 493 STVDVSAKFVNGKPSRIEARYIMRTLKDWDRFMRFM 600
T DV+AKF+NGKP IEA +++++ DWDRFMRFM
Sbjct: 64 ITRDVNAKFINGKPQAIEAVHVIKSPDDWDRFMRFM 99


>sp|P48264|PSB28_CYAPA Photosystem II reaction center psb28 protein
OS=Cyanophora paradoxa GN=psb28 PE=3 SV=1
Length = 112

Score = 115 bits (288), Expect = 2e-25
Identities = 58/96 (60%), Positives = 74/96 (77%), Gaps = 1/96 (1%)
Frame = +1

Query: 316 IQFIKGVNEQTIPDVSLTRSKDGTNGVATFSFEQPSVFDA-AGELRDITGLFMQDEEGVL 492
IQFI+GV+E+ IPDV L+RS+DG NG+A F F++P+VFD GE ITGL++ DEEG L
Sbjct: 4 IQFIQGVDEEAIPDVKLSRSQDGANGIAKFYFDKPTVFDVYQGE---ITGLYLIDEEGEL 60

Query: 493 STVDVSAKFVNGKPSRIEARYIMRTLKDWDRFMRFM 600
ST V AKF+NGKP IEA YIM ++W+RF+RFM
Sbjct: 61 STRTVYAKFINGKPQSIEASYIMNNREEWERFIRFM 96


tr_hit_id A9NPG6
Definition tr|A9NPG6|A9NPG6_PICSI Photosystem II reaction center psb28 protein OS=Picea sitchensis
Align length 103
Score (bit) 160.0
E-value 5.0e-38
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK958098|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0030_B19, 5'
(601 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9NPG6|A9NPG6_PICSI Photosystem II reaction center psb28 prot... 160 5e-38
tr|B6TYC5|B6TYC5_MAIZE Photosystem II reaction center W protein ... 158 2e-37
tr|B6SRI0|B6SRI0_MAIZE Photosystem II reaction center W protein ... 158 2e-37
tr|A7Q1K3|A7Q1K3_VITVI Photosystem II reaction center psb28 prot... 155 1e-36
tr|A9PHJ0|A9PHJ0_POPTR Photosystem II reaction center psb28 prot... 155 2e-36
tr|A3A1D0|A3A1D0_ORYSJ Photosystem II reaction center psb28 prot... 154 5e-36
tr|A2WYW0|A2WYW0_ORYSI Photosystem II reaction center psb28 prot... 154 5e-36
tr|A9TT51|A9TT51_PHYPA Photosystem II reaction center psb28 prot... 150 4e-35
tr|B6SKW1|B6SKW1_MAIZE Photosystem II reaction center W protein ... 145 1e-33
tr|A9SHP3|A9SHP3_PHYPA Photosystem II reaction center psb28 prot... 145 1e-33
tr|A8III5|A8III5_CHLRE Photosystem II reaction center psb28 prot... 133 9e-30
tr|A4S851|A4S851_OSTLU Photosystem II reaction center psb28 prot... 131 3e-29
tr|A6MVQ3|A6MVQ3_RHDSA Photosystem II reaction center psb28 prot... 115 1e-24
tr|B8C304|B8C304_THAPS Nuclear copy of photosystem II protein ps... 115 2e-24
tr|B2J5G7|B2J5G7_NOSP7 Photosystem II protein PsbW, class I OS=N... 110 6e-23
tr|B4W337|B4W337_9CYAN Photosystem II reaction center protein Ps... 109 1e-22
tr|Q4BX83|Q4BX83_CROWT Photosystem II reaction center psb28 prot... 108 2e-22
tr|B4WSH1|B4WSH1_9SYNE Photosystem II reaction center protein Ps... 108 3e-22
tr|B7FMR0|B7FMR0_MEDTR Putative uncharacterized protein OS=Medic... 108 3e-22
tr|B2XTK0|B2XTK0_HETA4 Photosystem II protein psb28 OS=Heterosig... 107 4e-22
tr|B2XT44|B2XT44_HETA2 Photosystem II protein psb28 OS=Heterosig... 107 4e-22
tr|B5W4B0|B5W4B0_SPIMA Photosystem II reaction center protein Ps... 107 5e-22
tr|B1WXW2|B1WXW2_CYAA5 Photosystem II 13 kD protein OS=Cyanothec... 107 7e-22
tr|A3IN21|A3IN21_9CHRO Photosystem II reaction center psb28 prot... 107 7e-22
tr|A3YZV7|A3YZV7_9SYNE Photosystem II reaction center psb28 prot... 106 1e-21
tr|B7K2E0|B7K2E0_SYNP8 Photosystem II reaction center protein Ps... 105 2e-21
tr|B4C2I3|B4C2I3_9CHRO Photosystem II reaction center protein Ps... 105 2e-21
tr|A0YUC0|A0YUC0_9CYAN Photosystem II reaction center psb28 prot... 105 2e-21
tr|B1XL01|B1XL01_SYNP2 Photosystem II reaction center W protein ... 105 3e-21
tr|A3Z7B0|A3Z7B0_9SYNE Photosystem II reaction center psb28 prot... 105 3e-21

>tr|A9NPG6|A9NPG6_PICSI Photosystem II reaction center psb28 protein
OS=Picea sitchensis PE=2 SV=1
Length = 202

Score = 160 bits (405), Expect = 5e-38
Identities = 78/103 (75%), Positives = 91/103 (88%)
Frame = +1

Query: 292 VVSMSKPVIQFIKGVNEQTIPDVSLTRSKDGTNGVATFSFEQPSVFDAAGELRDITGLFM 471
V MSKPVIQFI+G NEQ+IPDV LT+S+DGT G+ATFSF+QPSVFD++ EL DITGL+M
Sbjct: 86 VTMMSKPVIQFIQGTNEQSIPDVKLTKSRDGTIGMATFSFDQPSVFDSSRELGDITGLYM 145

Query: 472 QDEEGVLSTVDVSAKFVNGKPSRIEARYIMRTLKDWDRFMRFM 600
DEEGVL +VDV+AKFVNGKPS IEARYIMR+ +WDRFMRFM
Sbjct: 146 IDEEGVLQSVDVNAKFVNGKPSTIEARYIMRSPPEWDRFMRFM 188


>tr|B6TYC5|B6TYC5_MAIZE Photosystem II reaction center W protein
OS=Zea mays PE=2 SV=1
Length = 179

Score = 158 bits (400), Expect = 2e-37
Identities = 74/103 (71%), Positives = 90/103 (87%)
Frame = +1

Query: 292 VVSMSKPVIQFIKGVNEQTIPDVSLTRSKDGTNGVATFSFEQPSVFDAAGELRDITGLFM 471
V + +P IQFI+G +EQTIPDV LT+S+DGTNGVA F+FEQPSVFD++ EL DITG +M
Sbjct: 63 VAAAVRPAIQFIQGTDEQTIPDVRLTKSRDGTNGVAIFTFEQPSVFDSSAELGDITGFYM 122

Query: 472 QDEEGVLSTVDVSAKFVNGKPSRIEARYIMRTLKDWDRFMRFM 600
D+EGVL +VDVSAKFVNGKP+RIEA+Y+MRT +DWDRFMRFM
Sbjct: 123 IDDEGVLQSVDVSAKFVNGKPARIEAKYVMRTPRDWDRFMRFM 165


>tr|B6SRI0|B6SRI0_MAIZE Photosystem II reaction center W protein
OS=Zea mays PE=2 SV=1
Length = 180

Score = 158 bits (400), Expect = 2e-37
Identities = 74/103 (71%), Positives = 90/103 (87%)
Frame = +1

Query: 292 VVSMSKPVIQFIKGVNEQTIPDVSLTRSKDGTNGVATFSFEQPSVFDAAGELRDITGLFM 471
V + +P IQFI+G +EQTIPDV LT+S+DGTNGVA F+FEQPSVFD++ EL DITG +M
Sbjct: 64 VAAAVRPAIQFIQGTDEQTIPDVRLTKSRDGTNGVAIFTFEQPSVFDSSAELGDITGFYM 123

Query: 472 QDEEGVLSTVDVSAKFVNGKPSRIEARYIMRTLKDWDRFMRFM 600
D+EGVL +VDVSAKFVNGKP+RIEA+Y+MRT +DWDRFMRFM
Sbjct: 124 IDDEGVLQSVDVSAKFVNGKPARIEAKYVMRTPRDWDRFMRFM 166


>tr|A7Q1K3|A7Q1K3_VITVI Photosystem II reaction center psb28 protein
OS=Vitis vinifera GN=GSVIVT00028499001 PE=3 SV=1
Length = 179

Score = 155 bits (393), Expect = 1e-36
Identities = 71/103 (68%), Positives = 89/103 (86%)
Frame = +1

Query: 292 VVSMSKPVIQFIKGVNEQTIPDVSLTRSKDGTNGVATFSFEQPSVFDAAGELRDITGLFM 471
+ M KP IQFI+G +EQT+PDV LT+S+DGTNG+A F FEQPSVFD++GE+ DITG +M
Sbjct: 63 ITMMVKPTIQFIQGTDEQTVPDVRLTQSRDGTNGMAIFKFEQPSVFDSSGEVGDITGFYM 122

Query: 472 QDEEGVLSTVDVSAKFVNGKPSRIEARYIMRTLKDWDRFMRFM 600
DEEGVL +VDVSAKF+NGKPS IEA+Y+MR+ ++WDRFMRFM
Sbjct: 123 IDEEGVLQSVDVSAKFINGKPSGIEAKYVMRSPREWDRFMRFM 165


>tr|A9PHJ0|A9PHJ0_POPTR Photosystem II reaction center psb28 protein
OS=Populus trichocarpa PE=2 SV=1
Length = 181

Score = 155 bits (391), Expect = 2e-36
Identities = 70/103 (67%), Positives = 89/103 (86%)
Frame = +1

Query: 292 VVSMSKPVIQFIKGVNEQTIPDVSLTRSKDGTNGVATFSFEQPSVFDAAGELRDITGLFM 471
V M KP IQF++G +EQT+PDV LT+S+DGTNG+A F+F+QPSVFD++ E+ DITG +M
Sbjct: 65 VTMMVKPAIQFVQGADEQTVPDVRLTKSRDGTNGMAIFTFDQPSVFDSSAEVGDITGFYM 124

Query: 472 QDEEGVLSTVDVSAKFVNGKPSRIEARYIMRTLKDWDRFMRFM 600
DEEG+L +VDV+AKFVNGKP RIEA+YIMRT ++WDRFMRFM
Sbjct: 125 IDEEGILQSVDVNAKFVNGKPERIEAKYIMRTPREWDRFMRFM 167


>tr|A3A1D0|A3A1D0_ORYSJ Photosystem II reaction center psb28 protein
OS=Oryza sativa subsp. japonica GN=OsJ_004602 PE=2 SV=1
Length = 180

Score = 154 bits (388), Expect = 5e-36
Identities = 71/103 (68%), Positives = 90/103 (87%)
Frame = +1

Query: 292 VVSMSKPVIQFIKGVNEQTIPDVSLTRSKDGTNGVATFSFEQPSVFDAAGELRDITGLFM 471
V+ ++P IQFI+G +EQTIPDV LT+S+DGTNGVA F+F+QPSVFD++ EL DITG +M
Sbjct: 64 VMMAARPAIQFIQGTDEQTIPDVRLTKSRDGTNGVAIFTFDQPSVFDSSAELGDITGFYM 123

Query: 472 QDEEGVLSTVDVSAKFVNGKPSRIEARYIMRTLKDWDRFMRFM 600
D+EGVL +VDVSAKFVNGKP+ IEA+Y+MRT ++WDRFMRFM
Sbjct: 124 IDDEGVLQSVDVSAKFVNGKPALIEAKYVMRTPREWDRFMRFM 166


>tr|A2WYW0|A2WYW0_ORYSI Photosystem II reaction center psb28 protein
OS=Oryza sativa subsp. indica GN=OsI_05122 PE=3 SV=1
Length = 180

Score = 154 bits (388), Expect = 5e-36
Identities = 71/103 (68%), Positives = 90/103 (87%)
Frame = +1

Query: 292 VVSMSKPVIQFIKGVNEQTIPDVSLTRSKDGTNGVATFSFEQPSVFDAAGELRDITGLFM 471
V+ ++P IQFI+G +EQTIPDV LT+S+DGTNGVA F+F+QPSVFD++ EL DITG +M
Sbjct: 64 VMMAARPAIQFIQGTDEQTIPDVRLTKSRDGTNGVAIFTFDQPSVFDSSAELGDITGFYM 123

Query: 472 QDEEGVLSTVDVSAKFVNGKPSRIEARYIMRTLKDWDRFMRFM 600
D+EGVL +VDVSAKFVNGKP+ IEA+Y+MRT ++WDRFMRFM
Sbjct: 124 IDDEGVLQSVDVSAKFVNGKPALIEAKYVMRTPREWDRFMRFM 166


>tr|A9TT51|A9TT51_PHYPA Photosystem II reaction center psb28 protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_61027 PE=3 SV=1
Length = 115

Score = 150 bits (380), Expect = 4e-35
Identities = 70/98 (71%), Positives = 87/98 (88%)
Frame = +1

Query: 307 KPVIQFIKGVNEQTIPDVSLTRSKDGTNGVATFSFEQPSVFDAAGELRDITGLFMQDEEG 486
KPV+QFI+GV+E+++P++ LTRS DGTNG A F F+QPSVFD++ EL DITGL+M DEEG
Sbjct: 4 KPVLQFIRGVDERSVPEIRLTRSPDGTNGKAIFVFDQPSVFDSSRELGDITGLYMLDEEG 63

Query: 487 VLSTVDVSAKFVNGKPSRIEARYIMRTLKDWDRFMRFM 600
VLSTVDVSAKF+NGKPS+IE++YIMR +WDRFMRFM
Sbjct: 64 VLSTVDVSAKFLNGKPSKIESQYIMRNTTEWDRFMRFM 101


>tr|B6SKW1|B6SKW1_MAIZE Photosystem II reaction center W protein
OS=Zea mays PE=2 SV=1
Length = 185

Score = 145 bits (367), Expect = 1e-33
Identities = 66/103 (64%), Positives = 87/103 (84%)
Frame = +1

Query: 292 VVSMSKPVIQFIKGVNEQTIPDVSLTRSKDGTNGVATFSFEQPSVFDAAGELRDITGLFM 471
+ M KP +QFI+G +E TIPDV LTRS+DG+NG+A FSF+QPSVFD++GE+ +ITGL+M
Sbjct: 68 ITMMVKPTLQFIQGTDELTIPDVKLTRSRDGSNGMALFSFDQPSVFDSSGEVGEITGLYM 127

Query: 472 QDEEGVLSTVDVSAKFVNGKPSRIEARYIMRTLKDWDRFMRFM 600
DEEGV+ + DV+A+FVNGKP I A+++MRT K+WDRFMRFM
Sbjct: 128 IDEEGVIQSTDVNARFVNGKPEGIVAKHVMRTPKEWDRFMRFM 170


>tr|A9SHP3|A9SHP3_PHYPA Photosystem II reaction center psb28 protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_57848 PE=3 SV=1
Length = 115

Score = 145 bits (367), Expect = 1e-33
Identities = 67/98 (68%), Positives = 85/98 (86%)
Frame = +1

Query: 307 KPVIQFIKGVNEQTIPDVSLTRSKDGTNGVATFSFEQPSVFDAAGELRDITGLFMQDEEG 486
KPVIQFI+GV+E+ +P++ LTRS +GTNG A F F+QPSVFDA+ EL DITGL++ DEEG
Sbjct: 4 KPVIQFIRGVDERVVPEIRLTRSPNGTNGKAIFVFDQPSVFDASRELGDITGLYLVDEEG 63

Query: 487 VLSTVDVSAKFVNGKPSRIEARYIMRTLKDWDRFMRFM 600
LSTV+VSAKF+NGKPS+IE++Y+MR +WDRFMRFM
Sbjct: 64 TLSTVEVSAKFLNGKPSKIESQYVMRNTTEWDRFMRFM 101