DK958174 |
Clone id |
TST39A01NGRL0030_E24 |
Library |
TST39 |
Length |
620 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0030_E24. 5' end sequence. |
Accession |
DK958174 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL2910Contig1 |
Sequence |
GCTTAAGACGGTAGCGGAAAGCTTTGCAACGAGACCTTCCGTCTGAGTCGCGAGAGGAAG AAGGATGACAACAGCGGCGCGGCCGACATGGGCTCCAGCCAAAGGAGGGCAGGAACAGGG TGGCACGCGTATGTTCGGCCCTTCTCAGAAATTCTCCTCCCGAGATCTTGCTTCTCATAC CACACTGAAAACAAGGAAGGACGGCCAGGACACACAGGATGACCTGCGTAAGAGAAATCT GAGGGACGAGTTAGAGGACCGGGAAAGGAAACATTTTTCAAAAGATAGAGGCTACAGTGA TGATCGCGAAAGGAGAAGAGGGACAGCTGGAAGCATGCTGTACTTGGAAAATGGAGGGCC AAGGAGAGATACAGAGGAGAAGCTAGCCATTAAAAACATTGATGCTGATGATTCAGATGT GGATTTGAAGAGTGATTCTGATGAAAGTGACGGTGACGACGATGATGATGATGAGGACGA GACAGCAGCTCTGCTGGCTGAGTTAGAGCGGATAAAGAAAGAAAGAGCAGAAGAAAAACT GAGAAAGGAGAGACAGAAGCAGGAGGAAGAATTGAAATCAAAAGAAGTTGAGCTTGTTAG AGGAAACCCCTTGCTGAATC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9V3B6 |
Definition |
sp|Q9V3B6|CWC15_DROME Protein CWC15 homolog OS=Drosophila melanogaster |
Align length |
50 |
Score (bit) |
55.1 |
E-value |
3.0e-07 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NRY0 |
Definition |
tr|A9NRY0|A9NRY0_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
113 |
Score (bit) |
142.0 |
E-value |
1.0e-32 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK958174|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0030_E24, 5' (620 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NRY0|A9NRY0_PICSI Putative uncharacterized protein OS=Picea... 142 1e-32 tr|A9T5P3|A9T5P3_PHYPA Predicted protein OS=Physcomitrella paten... 121 4e-26 tr|Q8LD33|Q8LD33_ARATH Putative uncharacterized protein OS=Arabi... 119 1e-25 tr|B6SU82|B6SU82_MAIZE Pre-mRNA-splicing factor cwc15 OS=Zea may... 118 2e-25 tr|Q9LK52|Q9LK52_ARATH Dbj|BAA90629.1 OS=Arabidopsis thaliana GN... 117 4e-25 tr|Q93XX6|Q93XX6_ARATH Putative uncharacterized protein At3g1322... 117 4e-25 tr|Q9LWY5|Q9LWY5_ORYSJ Os06g0106100 protein OS=Oryza sativa subs... 117 7e-25 tr|A2Y8C5|A2Y8C5_ORYSI Putative uncharacterized protein OS=Oryza... 117 7e-25 tr|B7FMA9|B7FMA9_MEDTR Putative uncharacterized protein OS=Medic... 116 9e-25 tr|B6T6R6|B6T6R6_MAIZE Pre-mRNA-splicing factor cwc15 OS=Zea may... 116 1e-24 tr|B4FCJ9|B4FCJ9_MAIZE Putative uncharacterized protein OS=Zea m... 116 1e-24 tr|A5B8G4|A5B8G4_VITVI Putative uncharacterized protein OS=Vitis... 116 1e-24 tr|A7Q9D2|A7Q9D2_VITVI Chromosome chr19 scaffold_66, whole genom... 115 2e-24 tr|A8JGC0|A8JGC0_CHLRE Predicted protein OS=Chlamydomonas reinha... 67 1e-09 tr|A4S1Z4|A4S1Z4_OSTLU Predicted protein OS=Ostreococcus lucimar... 64 7e-09 tr|B6P9J6|B6P9J6_BRAFL Putative uncharacterized protein OS=Branc... 60 8e-08 tr|Q230Z1|Q230Z1_TETTH Cwf15/Cwc15 cell cycle control protein OS... 59 3e-07 tr|A7SIX1|A7SIX1_NEMVE Predicted protein OS=Nematostella vectens... 58 4e-07 tr|A0DPK5|A0DPK5_PARTE Chromosome undetermined scaffold_59, whol... 58 4e-07 tr|A0BCU2|A0BCU2_PARTE Chromosome undetermined scaffold_10, whol... 58 4e-07 tr|Q16GR1|Q16GR1_AEDAE Putative uncharacterized protein OS=Aedes... 56 2e-06 tr|Q7Q8S0|Q7Q8S0_ANOGA AGAP010594-PA OS=Anopheles gambiae GN=AGA... 55 3e-06 tr|Q29IC7|Q29IC7_DROPS GA11429 OS=Drosophila pseudoobscura pseud... 55 3e-06 tr|B4PWV6|B4PWV6_DROYA GE15453 OS=Drosophila yakuba GN=GE15453 P... 55 3e-06 tr|B4NTQ0|B4NTQ0_DROSI GD24660 OS=Drosophila simulans GN=GD24660... 55 3e-06 tr|B4NE11|B4NE11_DROWI GK25556 OS=Drosophila willistoni GN=GK255... 55 3e-06 tr|B4M223|B4M223_DROVI GJ19417 OS=Drosophila virilis GN=GJ19417 ... 55 3e-06 tr|B4JIQ1|B4JIQ1_DROGR GH12902 OS=Drosophila grimshawi GN=GH1290... 55 3e-06 tr|B4ILQ8|B4ILQ8_DROSE GM22219 OS=Drosophila sechellia GN=GM2221... 55 3e-06 tr|B4GW78|B4GW78_DROPE GL16509 OS=Drosophila persimilis GN=GL165... 55 3e-06
>tr|A9NRY0|A9NRY0_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 231
Score = 142 bits (359), Expect = 1e-32 Identities = 73/113 (64%), Positives = 84/113 (74%), Gaps = 1/113 (0%) Frame = +2
Query: 65 MTTAARPTWAPAKGGQEQGGTRMFGPSQKFSSRDLASHTTLKTRKDGQDTQXXXXXXXXX 244 MTTAARPTWAPAKGG EQGGTR+FGPSQKFSSRDLA+HTTLK+RKDGQDTQ Sbjct: 1 MTTAARPTWAPAKGGNEQGGTRIFGPSQKFSSRDLAAHTTLKSRKDGQDTQDELQKRNLR 60
Query: 245 XXXXXXXXXHF-SKDRGYSDDRERRRGTAGSMLYLENGGPRRDTEEKLAIKNI 400 HF SKDRGY+DDR+RR+G + LYLE G RR+ E+K+A +NI Sbjct: 61 DELEEREHRHFSSKDRGYADDRDRRKGASAGNLYLE--GARREAEDKIAPRNI 111
>tr|A9T5P3|A9T5P3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_88416 PE=4 SV=1 Length = 221
Score = 121 bits (303), Expect = 4e-26 Identities = 70/116 (60%), Positives = 76/116 (65%), Gaps = 4/116 (3%) Frame = +2
Query: 65 MTTAARPTWAPAKGGQEQGGTRMFGPSQKFSSRDLASHTTLKTRKDGQDTQXXXXXXXXX 244 MTTAARPTWAPAKGG EQGG RMFGPSQKFSSRDLASHT LK RKDGQDT Sbjct: 1 MTTAARPTWAPAKGGSEQGGVRMFGPSQKFSSRDLASHTQLKLRKDGQDTTEEIRRRDLR 60
Query: 245 XXXXXXXXXHFSKDRGYSDDRERRRG-TAGSMLYLENGGPRRDTE---EKLAIKNI 400 HFS DDR+RR+G TAG YL+ G +RDTE E+ AIKN+ Sbjct: 61 AELEDREHRHFSSKEKSYDDRDRRKGSTAG---YLD--GSKRDTEERSERAAIKNV 111
>tr|Q8LD33|Q8LD33_ARATH Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1 Length = 230
Score = 119 bits (298), Expect = 1e-25 Identities = 63/113 (55%), Positives = 78/113 (69%), Gaps = 1/113 (0%) Frame = +2
Query: 65 MTTAARPTWAPAKGGQEQGGTRMFGPSQKFSSRDLASHTTLKTRKDGQDTQXXXXXXXXX 244 MTTAARPTWAPAKGG EQGG R+FGPSQK+SSRD+A+HTTLK R++GQ TQ Sbjct: 1 MTTAARPTWAPAKGGNEQGGARIFGPSQKYSSRDVAAHTTLKPRREGQHTQEELQKINLR 60
Query: 245 XXXXXXXXXHF-SKDRGYSDDRERRRGTAGSMLYLENGGPRRDTEEKLAIKNI 400 HF SKD+ Y+DDR+RRR GS L LE G +RD EE++ +++ Sbjct: 61 DELEERERRHFSSKDKSYNDDRDRRR---GSQLLLE--GSKRDPEERIIPRSV 108
>tr|B6SU82|B6SU82_MAIZE Pre-mRNA-splicing factor cwc15 OS=Zea mays PE=2 SV=1 Length = 230
Score = 118 bits (296), Expect = 2e-25 Identities = 63/113 (55%), Positives = 79/113 (69%), Gaps = 1/113 (0%) Frame = +2
Query: 65 MTTAARPTWAPAKGGQEQGGTRMFGPSQKFSSRDLASHTTLKTRKDGQDTQXXXXXXXXX 244 MTTAARPTWAPAKGG EQGGTR+FGPSQKFSSRDLA+HT+LK RKDGQ TQ Sbjct: 1 MTTAARPTWAPAKGGNEQGGTRIFGPSQKFSSRDLAAHTSLKPRKDGQQTQEELQKRNLR 60
Query: 245 XXXXXXXXXHF-SKDRGYSDDRERRRGTAGSMLYLENGGPRRDTEEKLAIKNI 400 H+ SKD+ Y+++R+RR+ + S L LE G +R+TE+K+ + I Sbjct: 61 EELEERERKHYSSKDKSYAEERDRRK--SSSHLLLE--GSKRETEDKIVPREI 109
>tr|Q9LK52|Q9LK52_ARATH Dbj|BAA90629.1 OS=Arabidopsis thaliana GN=At3g13200 PE=4 SV=1 Length = 230
Score = 117 bits (294), Expect = 4e-25 Identities = 62/113 (54%), Positives = 78/113 (69%), Gaps = 1/113 (0%) Frame = +2
Query: 65 MTTAARPTWAPAKGGQEQGGTRMFGPSQKFSSRDLASHTTLKTRKDGQDTQXXXXXXXXX 244 MTTAARPTWAPAKGG EQGG R+FGPSQK+SSRD+A+HTTLK R++GQ TQ Sbjct: 1 MTTAARPTWAPAKGGNEQGGARIFGPSQKYSSRDVAAHTTLKPRREGQHTQEELQKINLR 60
Query: 245 XXXXXXXXXHF-SKDRGYSDDRERRRGTAGSMLYLENGGPRRDTEEKLAIKNI 400 HF SKD+ Y+DDR+RRR GS L LE+ +RD EE++ +++ Sbjct: 61 DELEERERRHFSSKDKSYNDDRDRRR---GSQLLLEDS--KRDPEERIIPRSV 108
>tr|Q93XX6|Q93XX6_ARATH Putative uncharacterized protein At3g13220; MJG19.16 OS=Arabidopsis thaliana GN=At3g13220/MJG19.16 PE=2 SV=1 Length = 230
Score = 117 bits (294), Expect = 4e-25 Identities = 62/113 (54%), Positives = 78/113 (69%), Gaps = 1/113 (0%) Frame = +2
Query: 65 MTTAARPTWAPAKGGQEQGGTRMFGPSQKFSSRDLASHTTLKTRKDGQDTQXXXXXXXXX 244 MTTAARPTWAPAKGG EQGG R+FGPSQK+SSRD+A+HTTLK R++GQ TQ Sbjct: 1 MTTAARPTWAPAKGGNEQGGARIFGPSQKYSSRDVAAHTTLKPRREGQHTQEELQKINLR 60
Query: 245 XXXXXXXXXHF-SKDRGYSDDRERRRGTAGSMLYLENGGPRRDTEEKLAIKNI 400 HF SKD+ Y+DDR+RRR GS L LE+ +RD EE++ +++ Sbjct: 61 DELEERERRHFSSKDKSYNDDRDRRR---GSQLLLEDS--KRDPEERIIPRSV 108
>tr|Q9LWY5|Q9LWY5_ORYSJ Os06g0106100 protein OS=Oryza sativa subsp. japonica GN=P0644B06.33 PE=4 SV=1 Length = 230
Score = 117 bits (292), Expect = 7e-25 Identities = 62/113 (54%), Positives = 78/113 (69%), Gaps = 1/113 (0%) Frame = +2
Query: 65 MTTAARPTWAPAKGGQEQGGTRMFGPSQKFSSRDLASHTTLKTRKDGQDTQXXXXXXXXX 244 MTTAARPTWAPAKGG EQGGTR+FGPSQK+SSRDLA+HTTLK RK+GQ TQ Sbjct: 1 MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDLAAHTTLKPRKEGQHTQEELQKRNLR 60
Query: 245 XXXXXXXXXHF-SKDRGYSDDRERRRGTAGSMLYLENGGPRRDTEEKLAIKNI 400 H+ SKD+ Y+++R+RR+ T+ L LE G RR+ E+K+ + I Sbjct: 61 DELEERERKHYSSKDKSYAEERDRRKSTS---LLLE--GSRREAEDKIVPREI 108
>tr|A2Y8C5|A2Y8C5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_21306 PE=4 SV=1 Length = 230
Score = 117 bits (292), Expect = 7e-25 Identities = 62/113 (54%), Positives = 78/113 (69%), Gaps = 1/113 (0%) Frame = +2
Query: 65 MTTAARPTWAPAKGGQEQGGTRMFGPSQKFSSRDLASHTTLKTRKDGQDTQXXXXXXXXX 244 MTTAARPTWAPAKGG EQGGTR+FGPSQK+SSRDLA+HTTLK RK+GQ TQ Sbjct: 1 MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDLAAHTTLKPRKEGQHTQEELQKRNLR 60
Query: 245 XXXXXXXXXHF-SKDRGYSDDRERRRGTAGSMLYLENGGPRRDTEEKLAIKNI 400 H+ SKD+ Y+++R+RR+ T+ L LE G RR+ E+K+ + I Sbjct: 61 DELEERERKHYSSKDKSYAEERDRRKSTS---LLLE--GSRREAEDKIVPREI 108
>tr|B7FMA9|B7FMA9_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 250
Score = 116 bits (291), Expect = 9e-25 Identities = 62/113 (54%), Positives = 76/113 (67%), Gaps = 1/113 (0%) Frame = +2
Query: 65 MTTAARPTWAPAKGGQEQGGTRMFGPSQKFSSRDLASHTTLKTRKDGQDTQXXXXXXXXX 244 MTTAARPTWAPAKGG EQGGTR+FGPSQK+SSRD+ASHTTLK RKDGQDTQ Sbjct: 1 MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKDGQDTQDELKRRNLR 60
Query: 245 XXXXXXXXXHF-SKDRGYSDDRERRRGTAGSMLYLENGGPRRDTEEKLAIKNI 400 HF SK++ Y+DDR+ R L+LE G +RD E+ + +++ Sbjct: 61 DELDERERRHFSSKNKSYNDDRDHGR---SGHLFLE--GTKRDIEDNIIPRSV 108
>tr|B6T6R6|B6T6R6_MAIZE Pre-mRNA-splicing factor cwc15 OS=Zea mays PE=2 SV=1 Length = 230
Score = 116 bits (290), Expect = 1e-24 Identities = 61/113 (53%), Positives = 78/113 (69%), Gaps = 1/113 (0%) Frame = +2
Query: 65 MTTAARPTWAPAKGGQEQGGTRMFGPSQKFSSRDLASHTTLKTRKDGQDTQXXXXXXXXX 244 MTTAARPTWAPAKGG EQGGTR+FGPSQK+SSRDLA+HT+LK RKDGQ TQ Sbjct: 1 MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDLAAHTSLKLRKDGQQTQEELQKRNLR 60
Query: 245 XXXXXXXXXHF-SKDRGYSDDRERRRGTAGSMLYLENGGPRRDTEEKLAIKNI 400 H+ SKD+ Y+++R+RR+ + S L LE G +R+ E+K+ + I Sbjct: 61 EELEERERKHYSSKDKSYAEERDRRK--SSSQLLLE--GSKREAEDKIVPREI 109
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