DK958192
Clone id TST39A01NGRL0030_F18
Library
Length 624
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0030_F18. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
AATGGCGAGTAGCAGTGTTCACGCCATAGCCACGAACATCGCTCTACTCGTAAAGACGCC
CATCAGCCACGACCCATCACCAGCTAGGCTTCCCTCTTTGAGTCTTGCTGCGCGACTCTG
CTTGACAGGACGCTTCACAACCAAGGGCACCCGCGGAGGCTCTTTGCACGCCACGAAGAT
CTTTGGCATCGAACCGGACCTCCCCGAGATTGATGACGATCTAGACTACGACACAAGAAC
AGCAGGAGAGGGCGAGGAGGATTTTTTCCCCTATGGCATTGCAGATGGACACCATATGTA
CCATGGAGAAGATGCAAACATTAATGTATTGGAAGCTTTTAAAGAGCCATTCATTGAAGC
TGGCGGACCTACTGGCTTTCAAGCTTACTTAGGATGGGGATCTTTGCCCGTTTTTTACTT
GATGGTTTGGTACGGTGTCCAGGTGGAATACATCTTTCTTGCAGCAGTTCTATTTATTTT
TGCATTTATCGGAATAGAGATGGACAAGCCAGACCTCGATCACGAGTTTCCGCCTGAGAT
CTACATGGAGCGTAGGAAGAAAAGGCTGCAAGAACAGCAAGCAAGCGAAACCAGTCTGCA
AGAGCAAGAAGCAAGCAAAATCTC
■■Homology search results ■■ -
sp_hit_id O88778
Definition sp|O88778|BSN_RAT Protein bassoon OS=Rattus norvegicus
Align length 57
Score (bit) 30.8
E-value 5.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK958192|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0030_F18, 5'
(624 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|O88778|BSN_RAT Protein bassoon OS=Rattus norvegicus GN=Bsn PE... 31 5.9
sp|Q2PC93|SSPO_CHICK SCO-spondin OS=Gallus gallus GN=SSPO PE=2 SV=1 31 5.9

>sp|O88778|BSN_RAT Protein bassoon OS=Rattus norvegicus GN=Bsn PE=1
SV=3
Length = 3938

Score = 30.8 bits (68), Expect = 5.9
Identities = 17/57 (29%), Positives = 24/57 (42%)
Frame = -2

Query: 314 HLLHGTYGVHLQCHRGKNPPRPLLLFLCRSLDRHQSRGGPVRCQRSSWRAKSLRGCP 144
H HG +G H H G+ P R R + RH++R P + + K G P
Sbjct: 3639 HRHHGDHGRHSGRHAGEEPGRRAARPHARDMGRHETRPHPQASPAPAMQKKGQPGYP 3695


>sp|Q2PC93|SSPO_CHICK SCO-spondin OS=Gallus gallus GN=SSPO PE=2 SV=1
Length = 5255

Score = 30.8 bits (68), Expect = 5.9
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1

Query: 280 CRWTPYVPWRRCKH*CIGSF 339
C W+P+ PW C+ C GSF
Sbjct: 4611 CLWSPWGPWGPCQQPCSGSF 4630


tr_hit_id Q5JK31
Definition tr|Q5JK31|Q5JK31_ORYSJ cDNA clone:006-207-H04, full insert sequence OS=Oryza sativa subsp. japonica
Align length 110
Score (bit) 70.9
E-value 6.0e-11
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK958192|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0030_F18, 5'
(624 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q5JK31|Q5JK31_ORYSJ cDNA clone:006-207-H04, full insert seque... 71 6e-11
tr|Q5JK30|Q5JK30_ORYSJ Putative uncharacterized protein OSJNBa00... 71 6e-11
tr|Q0JGD3|Q0JGD3_ORYSJ Os01g0929100 protein (Fragment) OS=Oryza ... 71 6e-11
tr|B8A8R7|B8A8R7_ORYSI Putative uncharacterized protein OS=Oryza... 71 6e-11
tr|A7NWZ1|A7NWZ1_VITVI Chromosome chr5 scaffold_2, whole genome ... 69 3e-10
tr|A5AI11|A5AI11_VITVI Putative uncharacterized protein OS=Vitis... 68 4e-10
tr|B4G054|B4G054_MAIZE Putative uncharacterized protein OS=Zea m... 67 9e-10
tr|B7FLH5|B7FLH5_MEDTR Putative uncharacterized protein OS=Medic... 62 2e-08
tr|A9TI07|A9TI07_PHYPA Predicted protein OS=Physcomitrella paten... 59 2e-07
tr|Q9FG89|Q9FG89_ARATH Genomic DNA, chromosome 5, P1 clone:MQD19... 48 4e-04
tr|Q8LE15|Q8LE15_ARATH Putative uncharacterized protein OS=Arabi... 48 4e-04
tr|A3A165|A3A165_ORYSJ Putative uncharacterized protein OS=Oryza... 35 3.6
tr|Q16TK0|Q16TK0_AEDAE Filamin, putative (Fragment) OS=Aedes aeg... 35 3.6
tr|Q16FY6|Q16FY6_AEDAE Filamin, putative OS=Aedes aegypti GN=AAE... 35 3.6

>tr|Q5JK31|Q5JK31_ORYSJ cDNA clone:006-207-H04, full insert sequence
OS=Oryza sativa subsp. japonica GN=OSJNBa0052O12.18-1
PE=2 SV=1
Length = 233

Score = 70.9 bits (172), Expect = 6e-11
Identities = 42/110 (38%), Positives = 49/110 (44%)
Frame = +2

Query: 236 RTAGEGEEDFFPYGIADGHHMYHGEDANINVLEAFKEPFIEAGGPTGFQAYLGWGSLPVF 415
RT G +DF YG+ DGHH Y+ E E + EA P GFQA + W P
Sbjct: 88 RTNGVSPDDF-EYGVYDGHHTYNETQDKKGFWEDVSEWYQEAEPPQGFQALISWLFPPAI 146

Query: 416 YLMVWYGVQVEYXXXXXXXXXXXXXXXEMDKPDLDHEFPPEIYMERRKKR 565
L + + V EY EMDKPD H F PEIYM R R
Sbjct: 147 ILGMAFNVPGEYLYIGAAVFVVVFCVIEMDKPDKPHNFEPEIYMMERSAR 196


>tr|Q5JK30|Q5JK30_ORYSJ Putative uncharacterized protein
OSJNBa0052O12.18-2 OS=Oryza sativa subsp. japonica
GN=OSJNBa0052O12.18-2 PE=4 SV=1
Length = 177

Score = 70.9 bits (172), Expect = 6e-11
Identities = 42/110 (38%), Positives = 49/110 (44%)
Frame = +2

Query: 236 RTAGEGEEDFFPYGIADGHHMYHGEDANINVLEAFKEPFIEAGGPTGFQAYLGWGSLPVF 415
RT G +DF YG+ DGHH Y+ E E + EA P GFQA + W P
Sbjct: 32 RTNGVSPDDF-EYGVYDGHHTYNETQDKKGFWEDVSEWYQEAEPPQGFQALISWLFPPAI 90

Query: 416 YLMVWYGVQVEYXXXXXXXXXXXXXXXEMDKPDLDHEFPPEIYMERRKKR 565
L + + V EY EMDKPD H F PEIYM R R
Sbjct: 91 ILGMAFNVPGEYLYIGAAVFVVVFCVIEMDKPDKPHNFEPEIYMMERSAR 140


>tr|Q0JGD3|Q0JGD3_ORYSJ Os01g0929100 protein (Fragment) OS=Oryza
sativa subsp. japonica GN=Os01g0929100 PE=4 SV=1
Length = 176

Score = 70.9 bits (172), Expect = 6e-11
Identities = 42/110 (38%), Positives = 49/110 (44%)
Frame = +2

Query: 236 RTAGEGEEDFFPYGIADGHHMYHGEDANINVLEAFKEPFIEAGGPTGFQAYLGWGSLPVF 415
RT G +DF YG+ DGHH Y+ E E + EA P GFQA + W P
Sbjct: 31 RTNGVSPDDF-EYGVYDGHHTYNETQDKKGFWEDVSEWYQEAEPPQGFQALISWLFPPAI 89

Query: 416 YLMVWYGVQVEYXXXXXXXXXXXXXXXEMDKPDLDHEFPPEIYMERRKKR 565
L + + V EY EMDKPD H F PEIYM R R
Sbjct: 90 ILGMAFNVPGEYLYIGAAVFVVVFCVIEMDKPDKPHNFEPEIYMMERSAR 139


>tr|B8A8R7|B8A8R7_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_05039 PE=4 SV=1
Length = 749

Score = 70.9 bits (172), Expect = 6e-11
Identities = 42/110 (38%), Positives = 49/110 (44%)
Frame = +2

Query: 236 RTAGEGEEDFFPYGIADGHHMYHGEDANINVLEAFKEPFIEAGGPTGFQAYLGWGSLPVF 415
RT G +DF YG+ DGHH Y+ E E + EA P GFQA + W P
Sbjct: 604 RTNGVSPDDF-EYGVYDGHHTYNETQDKKGFWEDVSEWYQEAEPPQGFQALISWLFPPAI 662

Query: 416 YLMVWYGVQVEYXXXXXXXXXXXXXXXEMDKPDLDHEFPPEIYMERRKKR 565
L + + V EY EMDKPD H F PEIYM R R
Sbjct: 663 ILGMAFNVPGEYLYIGAAVFVVVFCVIEMDKPDKPHNFEPEIYMMERSAR 712


>tr|A7NWZ1|A7NWZ1_VITVI Chromosome chr5 scaffold_2, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00020113001
PE=4 SV=1
Length = 218

Score = 68.6 bits (166), Expect = 3e-10
Identities = 40/106 (37%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Frame = +2

Query: 239 TAGEGEEDFFPYGIADGHHMYHGEDANINVLEAFKEPFIEAGGPTGFQAYLGWGSLPVFY 418
T G EDF YG DGHH Y D A E + PTGFQ ++ W LP
Sbjct: 76 TNGISSEDF-KYGYYDGHHTYFEGDDKGTFWGAIAEDYAAVEPPTGFQGFISWAFLPAIA 134

Query: 419 LMVWYGVQVEYXXXXXXXXXXXXXXXEMDKPDLDHEFPPEIY-MER 553
+++ V EY EMDKPD H F P+IY MER
Sbjct: 135 AGMYFNVPGEYLYIGAALFAAVFCIIEMDKPDKPHNFEPQIYNMER 180


>tr|A5AI11|A5AI11_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_032729 PE=4 SV=1
Length = 223

Score = 68.2 bits (165), Expect = 4e-10
Identities = 40/106 (37%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Frame = +2

Query: 239 TAGEGEEDFFPYGIADGHHMYHGEDANINVLEAFKEPFIEAGGPTGFQAYLGWGSLPVFY 418
T G EDF YG DGHH Y D A E + PTGFQ ++ W LP
Sbjct: 76 TNGISPEDF-KYGYYDGHHTYFEGDDKGTFWGAIAEDYAAVEPPTGFQGFISWAFLPAIA 134

Query: 419 LMVWYGVQVEYXXXXXXXXXXXXXXXEMDKPDLDHEFPPEIY-MER 553
+++ V EY EMDKPD H F P+IY MER
Sbjct: 135 AGMYFNVPGEYLYIGAALFAAVFCIIEMDKPDKPHNFEPQIYNMER 180


>tr|B4G054|B4G054_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 229

Score = 67.0 bits (162), Expect = 9e-10
Identities = 42/110 (38%), Positives = 46/110 (41%)
Frame = +2

Query: 236 RTAGEGEEDFFPYGIADGHHMYHGEDANINVLEAFKEPFIEAGGPTGFQAYLGWGSLPVF 415
RT G EDF YG DGHH Y E E + EA P GFQA + W P
Sbjct: 84 RTNGISPEDF-EYGKYDGHHTYFEGQDKKGFWEDVSEWYQEAEPPQGFQALISWAFPPAI 142

Query: 416 YLMVWYGVQVEYXXXXXXXXXXXXXXXEMDKPDLDHEFPPEIYMERRKKR 565
L + + V EY EM KPD H F PEIYM R R
Sbjct: 143 ILGMAFNVPGEYLYIGAAVFIVVFCVIEMGKPDKPHNFEPEIYMMERSAR 192


>tr|B7FLH5|B7FLH5_MEDTR Putative uncharacterized protein OS=Medicago
truncatula PE=2 SV=1
Length = 212

Score = 62.4 bits (150), Expect = 2e-08
Identities = 42/108 (38%), Positives = 51/108 (47%), Gaps = 2/108 (1%)
Frame = +2

Query: 236 RTAGEGEEDFFPYGIADGHHMYH-GEDANINVLEAFKEPFIEAGGPTGFQAYLGWGSLPV 412
RT G E+F YGI DGHH ++ GE+ V A + I G PTGFQ + P
Sbjct: 68 RTNGIPPEEF-EYGIFDGHHTFNEGEEKEGTVWGAIMDDVIAVGPPTGFQGLISRLFPPA 126

Query: 413 FYLMVWYGVQVEYXXXXXXXXXXXXXXXEMDKPDLDHEFPPEIY-MER 553
V++ V EY EMDKPD H F P+IY MER
Sbjct: 127 IAAGVFFDVPGEYLFIGAGIFTIVFCIIEMDKPDQPHHFEPQIYNMER 174


>tr|A9TI07|A9TI07_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_170186 PE=4 SV=1
Length = 217

Score = 58.9 bits (141), Expect = 2e-07
Identities = 35/97 (36%), Positives = 44/97 (45%), Gaps = 1/97 (1%)
Frame = +2

Query: 257 EDFFPYGIADGHHMYH-GEDANINVLEAFKEPFIEAGGPTGFQAYLGWGSLPVFYLMVWY 433
ED FP+G ADG H +H G+D + KE F +GGP G Q + W +P V +
Sbjct: 119 EDLFPFGKADGAHTWHEGDDGTW--WDGIKEVFETSGGPVGAQGAISWLFVPGLIAGVVF 176

Query: 434 GVQVEYXXXXXXXXXXXXXXXEMDKPDLDHEFPPEIY 544
V EY EM KPD F PE+Y
Sbjct: 177 NVDQEYLFLYTALFIFAFIGMEMAKPDKPSHFEPEMY 213


>tr|Q9FG89|Q9FG89_ARATH Genomic DNA, chromosome 5, P1 clone:MQD19
(Putative uncharacterized protein At5g43750)
OS=Arabidopsis thaliana GN=At5g43750 PE=2 SV=1
Length = 212

Score = 48.1 bits (113), Expect = 4e-04
Identities = 32/105 (30%), Positives = 40/105 (38%), Gaps = 1/105 (0%)
Frame = +2

Query: 254 EEDFFPYGIADGHHMYH-GEDANINVLEAFKEPFIEAGGPTGFQAYLGWGSLPVFYLMVW 430
E + F YG DG H Y+ GE A + GFQ + LP L ++
Sbjct: 73 EMEDFKYGYYDGAHTYYEGEVQKGTFWGAIADDIAAVDQTNGFQGLISCMFLPAIALGMY 132

Query: 431 YGVQVEYXXXXXXXXXXXXXXXEMDKPDLDHEFPPEIYMERRKKR 565
+ EY EMDKPD H F P+IY R R
Sbjct: 133 FDAPGEYLFIGAALFTVVFCIIEMDKPDQPHNFEPQIYKLERGAR 177