DK958210 |
Clone id |
TST39A01NGRL0030_G12 |
Library |
TST39 |
Length |
632 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0030_G12. 5' end sequence. |
Accession |
DK958210 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL745Contig1 |
Sequence |
GAGACTGTGCCTGCGTCTTCTGTGAGGGAGAGAGAGAAAGCCGGCATGTCGGTGGCTAAC TGACGCGTGTGCAGAACGCGGAGAAGTACGTGCGAGGCACCATCGTCTCATGACACACAT CTTCCCTCTACCTTTACTTCCCTCTCACTCTGTAGCATCATTCAGCCCTTCTCTGTAGCG CGCCGGCTGCGCGCCTCATCGCTACAGCTTGCATTACCGCAAGGCCTGCAAGCCCAATTG CCCAGGCCTGCGTGTCACTAGCAGCTGCTTCATCATGCCTCCCCTGGTGATAGATAATTT TCCATCGACTCCTGGTAAAGTGAAAGTAGAGAGGAGCAATTATTTCGGCCGCATGTCACA TCATTGGCAGTCCTCGTCGCTGGCCAATCCACTTCTTTGGCTTTTTGGACTTGCAAGCCT CGCTGTTGTCTTAGTGGTTCTGTTGAATTCTTTAGATGGCTACAAGGCCGTCCACATTAG CTCTACATGGGGAGGCGCACAGTGGGAAAAGCAGGTCCGGCTGTCAGCTCATCGCAAAAG AAGTGATAACAAAGTGGTGCTGGTAACAGGGGCAGCTGGTTTTGTGGGAATGCATGTCTC TCTTGCGCTGCGGAAACGAGGAGATGGTGTTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9M0B6 |
Definition |
sp|Q9M0B6|GAE1_ARATH UDP-glucuronate 4-epimerase 1 OS=Arabidopsis thaliana |
Align length |
119 |
Score (bit) |
94.0 |
E-value |
6.0e-19 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9RZV8 |
Definition |
tr|A9RZV8|A9RZV8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
120 |
Score (bit) |
108.0 |
E-value |
3.0e-22 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK958210|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0030_G12, 5' (632 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9RZV8|A9RZV8_PHYPA Predicted protein OS=Physcomitrella paten... 108 3e-22 tr|A9SLN5|A9SLN5_PHYPA Predicted protein OS=Physcomitrella paten... 104 5e-21 tr|A9SSQ9|A9SSQ9_PHYPA Predicted protein OS=Physcomitrella paten... 103 1e-20 tr|B8LKW2|B8LKW2_PICSI Putative uncharacterized protein OS=Picea... 99 2e-19 tr|A9RIM4|A9RIM4_PHYPA Predicted protein OS=Physcomitrella paten... 99 2e-19 tr|A9RD94|A9RD94_PHYPA Predicted protein OS=Physcomitrella paten... 99 2e-19 tr|A9S3V6|A9S3V6_PHYPA Predicted protein OS=Physcomitrella paten... 95 3e-18 tr|A9TRM1|A9TRM1_PHYPA Predicted protein OS=Physcomitrella paten... 94 9e-18 tr|A9S6M5|A9S6M5_PHYPA Predicted protein OS=Physcomitrella paten... 92 3e-17 tr|A5B5D4|A5B5D4_VITVI Putative uncharacterized protein OS=Vitis... 88 5e-16 tr|B6SI92|B6SI92_MAIZE Putative uncharacterized protein OS=Zea m... 87 1e-15 tr|Q6K9M5|Q6K9M5_ORYSJ Os02g0791500 protein OS=Oryza sativa subs... 86 1e-15 tr|A2XAG1|A2XAG1_ORYSI Putative uncharacterized protein OS=Oryza... 86 1e-15 tr|Q304Y2|Q304Y2_MAIZE UDP-glucuronic acid 4-epimerase OS=Zea ma... 84 5e-15 tr|B4F9K7|B4F9K7_MAIZE Putative uncharacterized protein OS=Zea m... 84 5e-15 tr|A9TFC1|A9TFC1_PHYPA Predicted protein OS=Physcomitrella paten... 81 6e-14 tr|A7PYE9|A7PYE9_VITVI Chromosome chr15 scaffold_37, whole genom... 78 5e-13 tr|A7PYE8|A7PYE8_VITVI Chromosome chr15 scaffold_37, whole genom... 77 1e-12 tr|A9NXH8|A9NXH8_PICSI Putative uncharacterized protein OS=Picea... 76 1e-12 tr|A7PYE7|A7PYE7_VITVI Chromosome chr15 scaffold_37, whole genom... 76 1e-12 tr|A5C3Y4|A5C3Y4_VITVI Putative uncharacterized protein OS=Vitis... 75 3e-12 tr|Q69KM5|Q69KM5_ORYSJ Putative uridine diphosphate galacturonat... 75 4e-12 tr|A2YA44|A2YA44_ORYSI Putative uncharacterized protein OS=Oryza... 75 4e-12 tr|A9P9K8|A9P9K8_POPTR Putative uncharacterized protein OS=Popul... 70 1e-10 tr|Q2MJA7|Q2MJA7_ORYSJ Os03g0249500 protein OS=Oryza sativa subs... 70 1e-10 tr|B6SPN6|B6SPN6_MAIZE Protein capI OS=Zea mays PE=2 SV=1 68 5e-10 tr|Q0J0N3|Q0J0N3_ORYSJ Os09g0504000 protein OS=Oryza sativa subs... 67 7e-10 tr|B8BDA3|B8BDA3_ORYSI Putative uncharacterized protein OS=Oryza... 67 7e-10 tr|A3C0E0|A3C0E0_ORYSJ Putative uncharacterized protein OS=Oryza... 67 7e-10 tr|Q84QV1|Q84QV1_ORYSJ Putative type 1 capsule synthesis gene(Ca... 66 2e-09
>tr|A9RZV8|A9RZV8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_179857 PE=4 SV=1 Length = 441
Score = 108 bits (270), Expect = 3e-22 Identities = 64/120 (53%), Positives = 72/120 (60%), Gaps = 1/120 (0%) Frame = +2
Query: 275 MPPLVIDNFPSTPGKVKVERSNYFGRMSHHWQSSSLANPLLWLFGXXXXXXXXXXXXXXX 454 MPP V+D FPSTPGKVK+ERSNYFGR+ W SS A LL L Sbjct: 1 MPPSVLDEFPSTPGKVKMERSNYFGRVGSRWHSSVSAK-LLCLTSILLLLTISAFFWVSS 59
Query: 455 DGYKAVHISSTWGGAQWEKQVRLSAHRKRSDNK-VVLVTGAAGFVGMHVSLALRKRGDGV 631 G + + +WEK+VR S +R DN VVLVTGAAGFVG HVSLALRKRGDGV Sbjct: 60 AGIDSQRPPTFQRSHEWEKRVRQSCLPRREDNPLVVLVTGAAGFVGSHVSLALRKRGDGV 119
>tr|A9SLN5|A9SLN5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_165615 PE=4 SV=1 Length = 446
Score = 104 bits (259), Expect = 5e-21 Identities = 59/131 (45%), Positives = 77/131 (58%), Gaps = 12/131 (9%) Frame = +2
Query: 275 MPPLVIDNFPSTPGKVKVERSNYFGRMSHHWQSSSLANPLL---WLFGXXXXXXXXXXXX 445 M P + DNFPSTPGKVK+ERSNYFGR+++ W +S+ A L +L Sbjct: 1 MAPSIQDNFPSTPGKVKMERSNYFGRVTNRWHTSASAKLFLFSVFLLAVTIFICFRITAN 60
Query: 446 XXXDGYKAVHISSTWGGA---------QWEKQVRLSAHRKRSDNKVVLVTGAAGFVGMHV 598 +GY + +ST GG W++++ S +R D VVLVTGAAGFVG HV Sbjct: 61 GMVEGYMSTAYTSTNGGTIRSAFKSDKVWDQKLLQSCTPERDDGLVVLVTGAAGFVGSHV 120
Query: 599 SLALRKRGDGV 631 SLAL+KRGDG+ Sbjct: 121 SLALKKRGDGL 131
>tr|A9SSQ9|A9SSQ9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_166362 PE=4 SV=1 Length = 450
Score = 103 bits (256), Expect = 1e-20 Identities = 65/134 (48%), Positives = 80/134 (59%), Gaps = 15/134 (11%) Frame = +2
Query: 275 MPPLVI-DNFPSTPGKVKVERSNYFGRMSHHWQSSSLANPLLWLFGXXXXXXXXXXXXXX 451 MPP V+ D+FPSTPGKVKVERS+YFGR++ W S++ A LL Sbjct: 1 MPPSVVQDSFPSTPGKVKVERSSYFGRVASRWHSTASAR-LLVFSAFLLAVTIFICFRIA 59
Query: 452 XDGYKAVHI-----SSTWGGA---------QWEKQVRLSAHRKRSDNKVVLVTGAAGFVG 589 +G+ V+I SST GG W+K+VR S KR + VVLVTGAAGFVG Sbjct: 60 ANGFVDVYIGGTAYSSTNGGTIRSAYRSDHLWDKKVRQSCTPKRENGLVVLVTGAAGFVG 119
Query: 590 MHVSLALRKRGDGV 631 HVSLAL+KRGDG+ Sbjct: 120 SHVSLALKKRGDGL 133
>tr|B8LKW2|B8LKW2_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 437
Score = 99.0 bits (245), Expect = 2e-19 Identities = 58/114 (50%), Positives = 66/114 (57%), Gaps = 1/114 (0%) Frame = +2
Query: 293 DNFPSTPGKVKVERSN-YFGRMSHHWQSSSLANPLLWLFGXXXXXXXXXXXXXXXDGYKA 469 D FPSTPGKVK+ERSN YFGR S WQSS +A W + Sbjct: 11 DAFPSTPGKVKMERSNIYFGRGSTRWQSS-VAKLFFWTVVVVGLIVIFFMRSSSPVETRR 69
Query: 470 VHISSTWGGAQWEKQVRLSAHRKRSDNKVVLVTGAAGFVGMHVSLALRKRGDGV 631 + + WGG WEK+VR S K VVLVTGAAGFVG HVSLAL++RGDGV Sbjct: 70 LLSTPHWGGHDWEKRVRYSCRVKTEKGIVVLVTGAAGFVGSHVSLALKRRGDGV 123
>tr|A9RIM4|A9RIM4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_55414 PE=4 SV=1 Length = 446
Score = 99.0 bits (245), Expect = 2e-19 Identities = 59/124 (47%), Positives = 69/124 (55%), Gaps = 5/124 (4%) Frame = +2
Query: 275 MPPLVI-DNFPSTPGKVKVERSNYFGRMSHHWQSSSLANPLLW---LFGXXXXXXXXXXX 442 MPP + D+FPSTPGKVKV+RSNY GRM+ W SS+ L L Sbjct: 1 MPPSAVQDDFPSTPGKVKVDRSNYLGRMTSRWHSSTATKILCTTSILLALTIFAVLWMGL 60
Query: 443 XXXXDGYKAVHISSTWGGAQWEKQVRLSAHRKRSDNKV-VLVTGAAGFVGMHVSLALRKR 619 +GY +WEK+V S R DN + VLVTGAAGFVG HVSLAL+KR Sbjct: 61 PRGSEGYSGQRTQGFQRSHEWEKKVIHSCVTNREDNALTVLVTGAAGFVGTHVSLALKKR 120
Query: 620 GDGV 631 GDGV Sbjct: 121 GDGV 124
>tr|A9RD94|A9RD94_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_55001 PE=4 SV=1 Length = 446
Score = 99.0 bits (245), Expect = 2e-19 Identities = 57/124 (45%), Positives = 74/124 (59%), Gaps = 5/124 (4%) Frame = +2
Query: 275 MPPLVI-DNFPSTPGKVKVERSNYFGRMSHHWQSSSLANPLL---WLFGXXXXXXXXXXX 442 MPP + D+FPSTPGKVK+++ NYFGR++ W SS+LA L L Sbjct: 1 MPPSTVQDDFPSTPGKVKMDKGNYFGRVTSRWHSSALAKLLCITSILLALTVSVFLWMSL 60
Query: 443 XXXXDGYKAVHISSTWGGAQWEKQVRLSAHRKRSDNKV-VLVTGAAGFVGMHVSLALRKR 619 GY ++ + +WE++V S R+DN + VLVTGAAGFVG HVSLAL+KR Sbjct: 61 PRGSQGYGSLKVQVFQRNHEWERKVIHSGSPNRNDNALTVLVTGAAGFVGTHVSLALKKR 120
Query: 620 GDGV 631 GDGV Sbjct: 121 GDGV 124
>tr|A9S3V6|A9S3V6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_56808 PE=4 SV=1 Length = 450
Score = 95.1 bits (235), Expect = 3e-18 Identities = 62/136 (45%), Positives = 76/136 (55%), Gaps = 17/136 (12%) Frame = +2
Query: 275 MPPLVI-DNFPSTPGKVKVERSNYFGRMSHHWQSSSLANPL----------LWLF----G 409 MPP + DN+PSTPGKVKVERSNYFGR++ W +++ L L++F G Sbjct: 1 MPPSTMHDNYPSTPGKVKVERSNYFGRVASRWHTTASTRLLACTAVLLTLTLFVFYRMSG 60
Query: 410 XXXXXXXXXXXXXXXDGYKAVHISSTWGGAQWEKQVRLSAHRKRSDNK--VVLVTGAAGF 583 +K H QWE +VR S KRS+ + VVLVTGAAGF Sbjct: 61 TSGGAIDGGIVGRSVAAFKPTH--------QWELKVRQSCLPKRSEEEAMVVLVTGAAGF 112
Query: 584 VGMHVSLALRKRGDGV 631 VG HVSLAL+KRGDGV Sbjct: 113 VGTHVSLALKKRGDGV 128
>tr|A9TRM1|A9TRM1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_60904 PE=4 SV=1 Length = 417
Score = 93.6 bits (231), Expect = 9e-18 Identities = 56/130 (43%), Positives = 72/130 (55%), Gaps = 12/130 (9%) Frame = +2
Query: 275 MPPLVIDNFPSTPGKVKVERSNYFGRMSHHWQSSSLANPL---LWLFGXXXXXXXXXXXX 445 M P + DNFPSTPGKVK+ERSNYFG ++ W +++ A ++L Sbjct: 1 MAPSIQDNFPSTPGKVKMERSNYFGWAANRWYTTASAKLFFFSVFLLTITIIISFRTSEN 60
Query: 446 XXXDGYKAVHISSTWGGA---------QWEKQVRLSAHRKRSDNKVVLVTGAAGFVGMHV 598 GY +S GG+ W+++V S RKR + VVLVTGAAGFVG HV Sbjct: 61 GAVGGYVRATYTSFNGGSISPAFKSDHAWDQKVTQSCIRKRVNGLVVLVTGAAGFVGSHV 120
Query: 599 SLALRKRGDG 628 SL L+KRGDG Sbjct: 121 SLVLKKRGDG 130
>tr|A9S6M5|A9S6M5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_163131 PE=4 SV=1 Length = 446
Score = 91.7 bits (226), Expect = 3e-17 Identities = 56/131 (42%), Positives = 72/131 (54%), Gaps = 12/131 (9%) Frame = +2
Query: 275 MPPLVIDNFPSTPGKVKVERSNYFGRMSHHWQSSSLANPL---LWLFGXXXXXXXXXXXX 445 M P V ++FPSTPGK K+ER+N+FGR + W +S+ A ++L Sbjct: 1 MAPSVQEDFPSTPGKGKMERNNFFGRAASRWHTSASAKLFALSVFLLVITIFICFRITGN 60
Query: 446 XXXDGYKAVHISSTWGGA---------QWEKQVRLSAHRKRSDNKVVLVTGAAGFVGMHV 598 DGY SST GG W+ +V S +R + VVLVTGAAGFVG HV Sbjct: 61 GMIDGYITSAYSSTNGGTLLPAFKSDHAWDLKVAQSCTPERENGLVVLVTGAAGFVGSHV 120
Query: 599 SLALRKRGDGV 631 SLAL+KRGDG+ Sbjct: 121 SLALKKRGDGL 131
>tr|A5B5D4|A5B5D4_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_008097 PE=4 SV=1 Length = 435
Score = 87.8 bits (216), Expect = 5e-16 Identities = 51/120 (42%), Positives = 64/120 (53%), Gaps = 6/120 (5%) Frame = +2
Query: 290 IDNFPSTPGKVKVERSNYFGRMSHHWQSSSLANPLLW------LFGXXXXXXXXXXXXXX 451 +DN PSTPGK K ++ +Y R H SSLA +LW + Sbjct: 5 MDNIPSTPGKFKSDKYHYIHRFRSH---SSLAKLILWSLFFFSVICFFFLLSPTSPTSSP 61
Query: 452 XDGYKAVHISSTWGGAQWEKQVRLSAHRKRSDNKVVLVTGAAGFVGMHVSLALRKRGDGV 631 D + V + TWGG +WEK+VR SA + VLVTG AGFVG HVS AL++RGDGV Sbjct: 62 ADRSRRVLANYTWGGPEWEKKVRQSARVRSDHGHTVLVTGGAGFVGSHVSAALKRRGDGV 121
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