DK958255
Clone id TST39A01NGRL0030_I10
Library
Length 671
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0030_I10. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
CTCCCTCTCTCTGTCTCGTCTGCTCGCCTGCTTGCCATGTCCATTCGAGAAGCTGTAGAC
TTTCGGCTGCACGAGCTCCAACAACTAGTATCAGAGCACTTGGTGGTGTTCTTGGCAACC
TGAGGTCGCCGTAGCAACTGTTGTTGGCGGACATACCTCTTAAAACGCTCTCTGTTGGTG
ACGCAAGAAAACCCCACACGGTGTTGCTAGGTGAGGAGGCGAGAAGAAGGTCAAGAAGGA
GAAAGGAAGCTCAGATAGAGACGCTTGAGATCAGTTGGAACAAGGCGGTGGCTAGTGGCT
CTCAGCGCATACCAGTTGGACGTAGTAAGCGGTGGTGGTAGGACAACCCACAAGACGGGG
TGCACAGATCGACAATCGCGCTGTAGCAGTCGGTTAACAGCACCAGCGAACGACAGTATT
CAATAATTGGACTCACTGGCGATGCCTAACCTCTAACACGCCTTCAGAGGATCGGTCTCA
CTTGCAAACTCCGGCCAAGAAGTTCAACCCGTTGTTGGCAAGGGGGCGTGAATATACGAG
GGAATCTCAGGTGATCAATCTCGGCACAGAGCAGTGCTGACGGCGCAAGGAAATCTCGAC
GGTGTTGGGCGACCACACGCACACACACTCTGACGATGTAATCAGTGGTGTCAGATACCC
ACAACTGCAAG
■■Homology search results ■■ -
sp_hit_id Q674R7
Definition sp|Q674R7|ATG9B_HUMAN Autophagy-related protein 9B OS=Homo sapiens
Align length 29
Score (bit) 32.3
E-value 2.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK958255|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0030_I10, 5'
(671 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q674R7|ATG9B_HUMAN Autophagy-related protein 9B OS=Homo sapie... 32 2.3

>sp|Q674R7|ATG9B_HUMAN Autophagy-related protein 9B OS=Homo sapiens
GN=ATG9B PE=2 SV=1
Length = 924

Score = 32.3 bits (72), Expect = 2.3
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = -2

Query: 184 ASPTESVLRGMSANNSCYGDLRLPRTPPS 98
A P SVL+G A+ SC+ L +P TPP+
Sbjct: 71 AGPPCSVLQGTGASQSCHSALPIPATPPT 99


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK958255|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0030_I10, 5'
(671 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******