DK958299 |
Clone id |
TST39A01NGRL0030_K06 |
Library |
TST39 |
Length |
789 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0030_K06. 5' end sequence. |
Accession |
DK958299 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL945Contig1 |
Sequence |
GTACCTGGGAACAGCCTTCCTGAACGTCTCCCCTTATGCCTTCTCTGCAGTCGGCATCGC CATTGCCATCGGCGTCTCTGTTTTGGGCGCATCATGGGGTATCTACATCACTGGTAGTAG CTTGATTGGAGCAGCCATAAAAGCTCCACGGATTACCTCCAAAAACCTGATCAGTATCAT CTTTTGTGAAGCTGTTGCAATCTATGGTGTCATCGTTGCGATCATTCTCCAAACGAAGTT GGAATCTGTGGAACAGGCCTACACGGCAGATTCATTGCGAGGAGGTTATGCGATTTTTGC CTCCGGGATCATAGTCGGGTTCGCTAACCTGGCTTGTGGGATCTGTGTGGGCATTATTGG AAGCAGCTGTGCTCTCTCTGATGCTCAGAACTCCTCGCTTTTTGTGAAGATATTAGTGAT CGAGATTTTTGGAAGTGCCCTGGGGCTTTTTGGTGTAATTGTTGGCATCATCATGTCATC TCAAATAACATGGACAACGTCCTCATAGTGAGATAGGATCTTTGTTGTTTCCTAAGCGCA TTGAGGAGGGATTTTCTTAAGGTTTTTGGTGCCCTCAAGTTCCTGCAGCACCCGAAGCGC AAAAACGCCTGTTTTGTACAGTATTCAAATCTTTTAAAGATTGAGGGGCGGGAATTGATG GTCCCAAGGGGCTTTTAAAAAAATTAACTTTTATGGGTTCATAAGAAAAGGGCTTTTGGG GTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P23968 |
Definition |
sp|P23968|VATO_YEAST V-type proton ATPase subunit c'' OS=Saccharomyces cerevisiae |
Align length |
155 |
Score (bit) |
166.0 |
E-value |
2.0e-40 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q6S9B3 |
Definition |
tr|Q6S9B3|Q6S9B3_9LILI V-ATPase subunit c'' proteolipid OS=Xerophyta viscosa |
Align length |
155 |
Score (bit) |
234.0 |
E-value |
3.0e-60 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK958299|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0030_K06, 5' (725 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q6S9B3|Q6S9B3_9LILI V-ATPase subunit c'' proteolipid OS=Xerop... 234 3e-60 tr|Q84V02|Q84V02_CITLI Vacuolar membrane ATPase subunit c'' OS=C... 233 1e-59 tr|A9PD21|A9PD21_POPTR Putative uncharacterized protein OS=Popul... 232 2e-59 tr|Q9SZY7|Q9SZY7_ARATH H+-transporting ATPase-like protein (Vacu... 231 3e-59 tr|Q9SLA2|Q9SLA2_ARATH Putative vacuolar ATP synthase proteolipi... 231 3e-59 tr|A7P7N8|A7P7N8_VITVI Chromosome chr9 scaffold_7, whole genome ... 231 4e-59 tr|A7P5K7|A7P5K7_VITVI Chromosome chr4 scaffold_6, whole genome ... 231 4e-59 tr|A5BJF2|A5BJF2_VITVI Putative uncharacterized protein OS=Vitis... 231 4e-59 tr|B4FZS8|B4FZS8_MAIZE Putative uncharacterized protein OS=Zea m... 229 1e-58 tr|A9STU7|A9STU7_PHYPA Predicted protein OS=Physcomitrella paten... 229 1e-58 tr|A9SZV0|A9SZV0_PHYPA Predicted protein OS=Physcomitrella paten... 228 3e-58 tr|A9RY81|A9RY81_PHYPA Predicted protein OS=Physcomitrella paten... 228 4e-58 tr|A9SMW3|A9SMW3_PHYPA Predicted protein OS=Physcomitrella paten... 226 9e-58 tr|Q9AX79|Q9AX79_ORYSJ cDNA clone:001-110-C12, full insert seque... 226 1e-57 tr|A2WSH8|A2WSH8_ORYSI Putative uncharacterized protein OS=Oryza... 226 1e-57 tr|A9NT77|A9NT77_PICSI Putative uncharacterized protein OS=Picea... 222 2e-56 tr|B3H4N3|B3H4N3_ARATH Uncharacterized protein At4g32530.2 OS=Ar... 216 2e-54 tr|A8J588|A8J588_CHLRE Vacuolar proton-ATPase subunit c'' proteo... 202 2e-50 tr|A4RR66|A4RR66_OSTLU F-ATPase family transporter: protons (Vac... 189 2e-46 tr|Q01GG1|Q01GG1_OSTTA Vacuolar H+-exporting ATPase chain c.PPA1... 189 2e-46 tr|Q86F90|Q86F90_SCHJA SJCHGC02846 protein OS=Schistosoma japoni... 176 2e-42 tr|B3S2K8|B3S2K8_TRIAD Putative uncharacterized protein OS=Trich... 171 3e-41 tr|A5DIW2|A5DIW2_PICGU Putative uncharacterized protein OS=Pichi... 170 1e-40 tr|Q6BP57|Q6BP57_DEBHA DEHA2E16368p OS=Debaryomyces hansenii GN=... 169 1e-40 tr|A5E1A8|A5E1A8_LODEL Vacuolar ATP synthase subunit c'' OS=Lodd... 169 1e-40 tr|Q6C2A7|Q6C2A7_YARLI YALI0F09405p OS=Yarrowia lipolytica GN=YA... 169 2e-40 tr|Q5ALE8|Q5ALE8_CANAL Putative uncharacterized protein PPA1 OS=... 169 2e-40 tr|Q5AL23|Q5AL23_CANAL Putative uncharacterized protein PPA1 OS=... 169 2e-40 tr|A3GHV8|A3GHV8_PICST Vacuolar ATPase V0 domain subunit c OS=Pi... 168 4e-40 tr|Q4RZF2|Q4RZF2_TETNG Chromosome 15 SCAF14934, whole genome sho... 167 6e-40
>tr|Q6S9B3|Q6S9B3_9LILI V-ATPase subunit c'' proteolipid OS=Xerophyta viscosa GN=VHA-c''1 PE=2 SV=1 Length = 177
Score = 234 bits (598), Expect = 3e-60 Identities = 123/155 (79%), Positives = 133/155 (85%), Gaps = 2/155 (1%) Frame = +2
Query: 8 GTAFLNVSPYAFSAVGIAIAIGVSVLGASWGIYITGSSLIGAAIKAPRITSKNLISIIFC 187 G A + +SPY F+A+GIAI+IGVSVLGA+WGI+ITGSSLIGAAIKAPRITSKNLIS+IFC Sbjct: 9 GRALVQISPYTFAAIGIAISIGVSVLGAAWGIFITGSSLIGAAIKAPRITSKNLISVIFC 68
Query: 188 EXXXXXXXXXXXXLQTKLESVE--QAYTADSLRGGYAIFASGIIVGFANLACGICVGIIG 361 E LQTKLESV Q YTA+SLR GYAIFASGIIVGFANL CG+CVGIIG Sbjct: 69 EAVAIYGVIVAIILQTKLESVPAAQIYTAESLRAGYAIFASGIIVGFANLVCGLCVGIIG 128
Query: 362 SSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVG 466 SSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVG Sbjct: 129 SSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVG 163
>tr|Q84V02|Q84V02_CITLI Vacuolar membrane ATPase subunit c'' OS=Citrus limon GN=VMA16 PE=2 SV=1 Length = 182
Score = 233 bits (593), Expect = 1e-59 Identities = 122/153 (79%), Positives = 130/153 (84%), Gaps = 2/153 (1%) Frame = +2
Query: 14 AFLNVSPYAFSAVGIAIAIGVSVLGASWGIYITGSSLIGAAIKAPRITSKNLISIIFCEX 193 A + +SPY FSA+GIA+AIGVSVLGA+WGIYITGSSLIGAAIKAPRITSKNLIS+IFCE Sbjct: 16 ALVKISPYTFSAIGIAVAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEA 75
Query: 194 XXXXXXXXXXXLQTKLESV--EQAYTADSLRGGYAIFASGIIVGFANLACGICVGIIGSS 367 LQTKLESV Q Y +SLR GYAIFASGIIVGFANL CG+CVGIIGSS Sbjct: 76 VAIYGVIVAIILQTKLESVPASQIYAPESLRAGYAIFASGIIVGFANLVCGLCVGIIGSS 135
Query: 368 CALSDAQNSSLFVKILVIEIFGSALGLFGVIVG 466 CALSDAQNSSLFVKILVIEIFGSALGLFGVIVG Sbjct: 136 CALSDAQNSSLFVKILVIEIFGSALGLFGVIVG 168
>tr|A9PD21|A9PD21_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 174
Score = 232 bits (591), Expect = 2e-59 Identities = 123/153 (80%), Positives = 130/153 (84%), Gaps = 2/153 (1%) Frame = +2
Query: 14 AFLNVSPYAFSAVGIAIAIGVSVLGASWGIYITGSSLIGAAIKAPRITSKNLISIIFCEX 193 A + +SPY FSAVGIAIAIGVSVLGA+WGIYITGSSLIGAA+KAPRITSKNLIS+IFCE Sbjct: 8 ALVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAVKAPRITSKNLISVIFCEA 67
Query: 194 XXXXXXXXXXXLQTKLESV--EQAYTADSLRGGYAIFASGIIVGFANLACGICVGIIGSS 367 LQTKLESV Q Y +SLR GYAIFASGIIVGFANL CG+CVGIIGSS Sbjct: 68 VAIYGVIVAIILQTKLESVPASQIYDPESLRAGYAIFASGIIVGFANLFCGLCVGIIGSS 127
Query: 368 CALSDAQNSSLFVKILVIEIFGSALGLFGVIVG 466 CALSDAQNSSLFVKILVIEIFGSALGLFGVIVG Sbjct: 128 CALSDAQNSSLFVKILVIEIFGSALGLFGVIVG 160
>tr|Q9SZY7|Q9SZY7_ARATH H+-transporting ATPase-like protein (Vacuolar membrane ATPase subunit c'') (Putative uncharacterized protein) OS=Arabidopsis thaliana GN=VMA16 PE=2 SV=1 Length = 180
Score = 231 bits (590), Expect = 3e-59 Identities = 121/155 (78%), Positives = 132/155 (85%), Gaps = 2/155 (1%) Frame = +2
Query: 8 GTAFLNVSPYAFSAVGIAIAIGVSVLGASWGIYITGSSLIGAAIKAPRITSKNLISIIFC 187 G A + +SPY FSA+GIAI+IGVSVLGA+WGIYITGSSLIGAAI+APRITSKNLIS+IFC Sbjct: 14 GAALVRISPYTFSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEAPRITSKNLISVIFC 73
Query: 188 EXXXXXXXXXXXXLQTKLESVEQA--YTADSLRGGYAIFASGIIVGFANLACGICVGIIG 361 E LQTKLESV + Y A+SLR GYAIFASGIIVGFANL CG+CVGIIG Sbjct: 74 EAVAIYGVIVAIILQTKLESVPSSKMYDAESLRAGYAIFASGIIVGFANLVCGLCVGIIG 133
Query: 362 SSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVG 466 SSCALSDAQNS+LFVKILVIEIFGSALGLFGVIVG Sbjct: 134 SSCALSDAQNSTLFVKILVIEIFGSALGLFGVIVG 168
>tr|Q9SLA2|Q9SLA2_ARATH Putative vacuolar ATP synthase proteolipid subunit (At2g25610) OS=Arabidopsis thaliana GN=At2g25610 PE=2 SV=1 Length = 178
Score = 231 bits (590), Expect = 3e-59 Identities = 121/155 (78%), Positives = 132/155 (85%), Gaps = 2/155 (1%) Frame = +2
Query: 8 GTAFLNVSPYAFSAVGIAIAIGVSVLGASWGIYITGSSLIGAAIKAPRITSKNLISIIFC 187 G A + +SPY FSA+GIAI+IGVSVLGA+WGIYITGSSLIGAAI+APRITSKNLIS+IFC Sbjct: 12 GAALVRISPYTFSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEAPRITSKNLISVIFC 71
Query: 188 EXXXXXXXXXXXXLQTKLESVEQA--YTADSLRGGYAIFASGIIVGFANLACGICVGIIG 361 E LQTKLESV + Y A+SLR GYAIFASGIIVGFANL CG+CVGIIG Sbjct: 72 EAVAIYGVIVAIILQTKLESVPSSKMYDAESLRAGYAIFASGIIVGFANLVCGLCVGIIG 131
Query: 362 SSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVG 466 SSCALSDAQNS+LFVKILVIEIFGSALGLFGVIVG Sbjct: 132 SSCALSDAQNSTLFVKILVIEIFGSALGLFGVIVG 166
>tr|A7P7N8|A7P7N8_VITVI Chromosome chr9 scaffold_7, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00034535001 PE=3 SV=1 Length = 177
Score = 231 bits (589), Expect = 4e-59 Identities = 122/153 (79%), Positives = 130/153 (84%), Gaps = 2/153 (1%) Frame = +2
Query: 14 AFLNVSPYAFSAVGIAIAIGVSVLGASWGIYITGSSLIGAAIKAPRITSKNLISIIFCEX 193 A + +SPY FSA+GIAIAIGVSVLGA+WGIYITGSSLIGAAIKAPRITSKNLIS+IFCE Sbjct: 11 ALVQISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEA 70
Query: 194 XXXXXXXXXXXLQTKLESVEQA--YTADSLRGGYAIFASGIIVGFANLACGICVGIIGSS 367 LQTKLESV + Y +SLR GYAIFASGIIVGFANL CG+CVGIIGSS Sbjct: 71 VAIYGVIVAIILQTKLESVPASNIYAPESLRAGYAIFASGIIVGFANLVCGLCVGIIGSS 130
Query: 368 CALSDAQNSSLFVKILVIEIFGSALGLFGVIVG 466 CALSDAQNSSLFVKILVIEIFGSALGLFGVIVG Sbjct: 131 CALSDAQNSSLFVKILVIEIFGSALGLFGVIVG 163
>tr|A7P5K7|A7P5K7_VITVI Chromosome chr4 scaffold_6, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00032571001 PE=3 SV=1 Length = 177
Score = 231 bits (589), Expect = 4e-59 Identities = 121/153 (79%), Positives = 130/153 (84%), Gaps = 2/153 (1%) Frame = +2
Query: 14 AFLNVSPYAFSAVGIAIAIGVSVLGASWGIYITGSSLIGAAIKAPRITSKNLISIIFCEX 193 A + +SPY FSA+GIA+AIGVSVLGA+WGIYITGSSLIGAAIKAPRITSKNLIS+IFCE Sbjct: 11 ALVQISPYTFSAIGIAVAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEA 70
Query: 194 XXXXXXXXXXXLQTKLESV--EQAYTADSLRGGYAIFASGIIVGFANLACGICVGIIGSS 367 LQTKLESV + Y +SLR GYAIFASGIIVGFANL CG+CVGIIGSS Sbjct: 71 VAIYGVIVAIILQTKLESVPASKIYAPESLRAGYAIFASGIIVGFANLVCGLCVGIIGSS 130
Query: 368 CALSDAQNSSLFVKILVIEIFGSALGLFGVIVG 466 CALSDAQNSSLFVKILVIEIFGSALGLFGVIVG Sbjct: 131 CALSDAQNSSLFVKILVIEIFGSALGLFGVIVG 163
>tr|A5BJF2|A5BJF2_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_004447 PE=3 SV=1 Length = 177
Score = 231 bits (589), Expect = 4e-59 Identities = 121/153 (79%), Positives = 130/153 (84%), Gaps = 2/153 (1%) Frame = +2
Query: 14 AFLNVSPYAFSAVGIAIAIGVSVLGASWGIYITGSSLIGAAIKAPRITSKNLISIIFCEX 193 A + +SPY FSA+GIA+AIGVSVLGA+WGIYITGSSLIGAAIKAPRITSKNLIS+IFCE Sbjct: 11 ALVQISPYTFSAIGIAVAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEA 70
Query: 194 XXXXXXXXXXXLQTKLESV--EQAYTADSLRGGYAIFASGIIVGFANLACGICVGIIGSS 367 LQTKLESV + Y +SLR GYAIFASGIIVGFANL CG+CVGIIGSS Sbjct: 71 VAIYGVIVAIILQTKLESVPASKIYAPESLRAGYAIFASGIIVGFANLVCGLCVGIIGSS 130
Query: 368 CALSDAQNSSLFVKILVIEIFGSALGLFGVIVG 466 CALSDAQNSSLFVKILVIEIFGSALGLFGVIVG Sbjct: 131 CALSDAQNSSLFVKILVIEIFGSALGLFGVIVG 163
>tr|B4FZS8|B4FZS8_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 176
Score = 229 bits (584), Expect = 1e-58 Identities = 119/153 (77%), Positives = 130/153 (84%), Gaps = 2/153 (1%) Frame = +2
Query: 14 AFLNVSPYAFSAVGIAIAIGVSVLGASWGIYITGSSLIGAAIKAPRITSKNLISIIFCEX 193 A + +SPY FSA+GIA++IGVSVLGA+WGI+ITGSSLIGAAIKAPRITSKNLIS+IFCE Sbjct: 11 ALVQISPYTFSAIGIAVSIGVSVLGAAWGIFITGSSLIGAAIKAPRITSKNLISVIFCEA 70
Query: 194 XXXXXXXXXXXLQTKLESV--EQAYTADSLRGGYAIFASGIIVGFANLACGICVGIIGSS 367 LQTKLESV Q Y +SLR GYAIFASG+IVGFANL CG+CVGIIGSS Sbjct: 71 VAIYGVIVAIILQTKLESVPTSQMYDPESLRAGYAIFASGLIVGFANLVCGVCVGIIGSS 130
Query: 368 CALSDAQNSSLFVKILVIEIFGSALGLFGVIVG 466 CALSDAQNSSLFVKILVIEIFGSALGLFGVIVG Sbjct: 131 CALSDAQNSSLFVKILVIEIFGSALGLFGVIVG 163
>tr|A9STU7|A9STU7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_188359 PE=3 SV=1 Length = 178
Score = 229 bits (584), Expect = 1e-58 Identities = 117/151 (77%), Positives = 130/151 (86%) Frame = +2
Query: 14 AFLNVSPYAFSAVGIAIAIGVSVLGASWGIYITGSSLIGAAIKAPRITSKNLISIIFCEX 193 A L +SPY +SA+GIAI+IGVSVLGASWGIYITGSSLIGAAIKAPRITSKNLIS+IFCE Sbjct: 13 ALLYMSPYVYSAIGIAISIGVSVLGASWGIYITGSSLIGAAIKAPRITSKNLISVIFCEA 72
Query: 194 XXXXXXXXXXXLQTKLESVEQAYTADSLRGGYAIFASGIIVGFANLACGICVGIIGSSCA 373 LQTKLE+ +Q + DS+R GY++FASGIIVGFANL CG+CVGIIGSSCA Sbjct: 73 VAIYGVIVAIILQTKLEATKQPFHPDSMRAGYSLFASGIIVGFANLLCGLCVGIIGSSCA 132
Query: 374 LSDAQNSSLFVKILVIEIFGSALGLFGVIVG 466 LSDAQNS+LFVKILVIEIFGSALGLFGVIVG Sbjct: 133 LSDAQNSTLFVKILVIEIFGSALGLFGVIVG 163
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