DK958333 |
Clone id |
TST39A01NGRL0030_L16 |
Library |
TST39 |
Length |
590 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0030_L16. 5' end sequence. |
Accession |
DK958333 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL2546Contig1 |
Sequence |
GTCGCCTGTCCCGTGCAGCGGATGTAACACAGACTTGCAGAAGGTCCCCACTCTTTGAGA TGCGTTTCAATTTGTTCTTTCCGCGCAATACGTAGGCGACCCACTGGTACAAATTCATGG ACTGAACTCACAGAATAGTAGTTTAGTAGATTTCGTTCGCAATGGCGGGCGCAGCATCGG CTTTGTTTTTGTTGGATATGAAGGGACGAGTTTTAATTTGGAGAGACTATAGAGGGGATG TGTCGGCTGGGCAGGTGGAGAAGTTCTTCTCCAAACTTATCGAGAGAGAGGGTGATCCAA GCTCCCACGATCCAGTGGTCTTTGATGATGGTGTGACATTTATGTTTGTTCAATACAACA ATGTCTATGTATTGACTGCGGCAAGGCAGAATTGCAATGCGGCAAGCATGTTACTCTTTC TGCACCGAGTAATTGATGTTCTCAAGCATTATTTTGAGGAGCTTGAAGAAGAGTCTTTAC GGGACAACTTCGTTGTTGTGTATGAACTGCTTGATGAAATAATGGATTTTGGTTATCCGC AATATACGGAAGCCAAGATTTTGAGTGAATTCATCAAGACAGATGCGTAC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q54HS9 |
Definition |
sp|Q54HS9|AP1M_DICDI AP-1 complex subunit mu OS=Dictyostelium discoideum |
Align length |
140 |
Score (bit) |
162.0 |
E-value |
1.0e-39 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LRZ0 |
Definition |
tr|B8LRZ0|B8LRZ0_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
143 |
Score (bit) |
258.0 |
E-value |
2.0e-67 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK958333|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0030_L16, 5' (590 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LRZ0|B8LRZ0_PICSI Putative uncharacterized protein OS=Picea... 258 2e-67 tr|A7QY06|A7QY06_VITVI Chromosome undetermined scaffold_235, who... 255 1e-66 tr|A5C9L9|A5C9L9_VITVI Putative uncharacterized protein OS=Vitis... 255 1e-66 tr|B4FQ20|B4FQ20_MAIZE Putative uncharacterized protein OS=Zea m... 250 5e-65 tr|O22715|O22715_ARATH Putative Clathrin Coat Assembly protein (... 249 6e-65 tr|Q5N9S2|Q5N9S2_ORYSJ Clathrin-associated protein unc-101-like ... 248 2e-64 tr|Q0JK13|Q0JK13_ORYSJ Os01g0703600 protein (Putative uncharacte... 248 2e-64 tr|A9TRS4|A9TRS4_PHYPA Predicted protein OS=Physcomitrella paten... 248 2e-64 tr|A2WU74|A2WU74_ORYSI Putative uncharacterized protein OS=Oryza... 248 2e-64 tr|A9TUU6|A9TUU6_PHYPA Predicted protein OS=Physcomitrella paten... 248 2e-64 tr|Q9SAC9|Q9SAC9_ARATH T16B5.13 protein OS=Arabidopsis thaliana ... 245 1e-63 tr|Q65XN2|Q65XN2_ORYSJ Os05g0543100 protein OS=Oryza sativa subs... 233 6e-60 tr|B8AW82|B8AW82_ORYSI Putative uncharacterized protein OS=Oryza... 233 6e-60 tr|A3B6E5|A3B6E5_ORYSJ Putative uncharacterized protein OS=Oryza... 233 6e-60 tr|Q9SGX7|Q9SGX7_ARATH F20B24.16 OS=Arabidopsis thaliana PE=4 SV=1 194 4e-48 tr|A8HXA2|A8HXA2_CHLRE Mu1-Adaptin OS=Chlamydomonas reinhardtii ... 193 5e-48 tr|Q0UB23|Q0UB23_PHANO Putative uncharacterized protein OS=Phaeo... 161 3e-38 tr|B2WM53|B2WM53_PYRTR AP-2 complex subunit mu OS=Pyrenophora tr... 160 7e-38 tr|Q1DSU4|Q1DSU4_COCIM Putative uncharacterized protein OS=Cocci... 157 3e-37 tr|B6QFT4|B6QFT4_PENMA AP-1 adaptor complex subunit mu, putative... 157 3e-37 tr|A4UCC7|A4UCC7_MAGGR Putative uncharacterized protein OS=Magna... 157 3e-37 tr|B8M9P4|B8M9P4_9EURO AP-1 adaptor complex subunit mu, putative... 157 4e-37 tr|A7RTW3|A7RTW3_NEMVE Predicted protein OS=Nematostella vectens... 157 6e-37 tr|Q872K3|Q872K3_NEUCR Probable clathrin assembly protein AP47 O... 157 6e-37 tr|Q7RVT3|Q7RVT3_NEUCR AP-1 complex subunit mu OS=Neurospora cra... 157 6e-37 tr|B2ABX3|B2ABX3_PODAN Predicted CDS Pa_0_1210 OS=Podospora anse... 157 6e-37 tr|Q8MTC0|Q8MTC0_TOXGO Mu1 adaptin OS=Toxoplasma gondii GN=mu1 P... 156 7e-37 tr|B6KKM9|B6KKM9_TOXGO Mu1 adaptin OS=Toxoplasma gondii ME49 GN=... 156 7e-37 tr|Q283P0|Q283P0_CRYPA AP-1 mu subunit OS=Cryphonectria parasiti... 154 3e-36 tr|Q4WUU1|Q4WUU1_ASPFU AP-1 adaptor complex subunit mu, putative... 153 6e-36
>tr|B8LRZ0|B8LRZ0_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 428
Score = 258 bits (658), Expect = 2e-67 Identities = 120/143 (83%), Positives = 135/143 (94%) Frame = +3
Query: 162 MAGAASALFLLDMKGRVLIWRDYRGDVSAGQVEKFFSKLIEREGDPSSHDPVVFDDGVTF 341 MAGAASALF LD+KGRVL+WRDYRGDVS+ Q E+FFSKLIE+EGDP SHDPVV D G+T+ Sbjct: 1 MAGAASALFFLDLKGRVLVWRDYRGDVSSSQAERFFSKLIEKEGDPGSHDPVVHDSGITY 60
Query: 342 MFVQYNNVYVLTAARQNCNAASMLLFLHRVIDVLKHYFEELEEESLRDNFVVVYELLDEI 521 MF+Q+NNVY++ A+RQNCNAAS+LLFLHRV+DV KHYFEELEEESLRDNFVVVYELLDE+ Sbjct: 61 MFIQHNNVYLMIASRQNCNAASLLLFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEM 120
Query: 522 MDFGYPQYTEAKILSEFIKTDAY 590 MDFGYPQYTEAKILSEFIKTDAY Sbjct: 121 MDFGYPQYTEAKILSEFIKTDAY 143
>tr|A7QY06|A7QY06_VITVI Chromosome undetermined scaffold_235, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00009485001 PE=4 SV=1 Length = 428
Score = 255 bits (651), Expect = 1e-66 Identities = 120/143 (83%), Positives = 137/143 (95%) Frame = +3
Query: 162 MAGAASALFLLDMKGRVLIWRDYRGDVSAGQVEKFFSKLIEREGDPSSHDPVVFDDGVTF 341 MAGAASALFLLD+KGRVL+WRDYRGDVSA Q E+FF+KL+E+EGDP S DPVV+D+GVT+ Sbjct: 1 MAGAASALFLLDIKGRVLVWRDYRGDVSAVQAERFFAKLMEKEGDPESQDPVVYDNGVTY 60
Query: 342 MFVQYNNVYVLTAARQNCNAASMLLFLHRVIDVLKHYFEELEEESLRDNFVVVYELLDEI 521 MF+Q+NNV+++TA+RQNCNAAS LLFLHRV+DV KHYFEELEEESLRDNFVVVYELLDE+ Sbjct: 61 MFIQHNNVFLMTASRQNCNAASHLLFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEM 120
Query: 522 MDFGYPQYTEAKILSEFIKTDAY 590 MDFGYPQYTEAKILSEFIKTDAY Sbjct: 121 MDFGYPQYTEAKILSEFIKTDAY 143
>tr|A5C9L9|A5C9L9_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_035320 PE=4 SV=1 Length = 230
Score = 255 bits (651), Expect = 1e-66 Identities = 120/143 (83%), Positives = 137/143 (95%) Frame = +3
Query: 162 MAGAASALFLLDMKGRVLIWRDYRGDVSAGQVEKFFSKLIEREGDPSSHDPVVFDDGVTF 341 MAGAASALFLLD+KGRVL+WRDYRGDVSA Q E+FF+KL+E+EGDP S DPVV+D+GVT+ Sbjct: 1 MAGAASALFLLDIKGRVLVWRDYRGDVSAVQAERFFAKLMEKEGDPESQDPVVYDNGVTY 60
Query: 342 MFVQYNNVYVLTAARQNCNAASMLLFLHRVIDVLKHYFEELEEESLRDNFVVVYELLDEI 521 MF+Q+NNV+++TA+RQNCNAAS LLFLHRV+DV KHYFEELEEESLRDNFVVVYELLDE+ Sbjct: 61 MFIQHNNVFLMTASRQNCNAASHLLFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEM 120
Query: 522 MDFGYPQYTEAKILSEFIKTDAY 590 MDFGYPQYTEAKILSEFIKTDAY Sbjct: 121 MDFGYPQYTEAKILSEFIKTDAY 143
>tr|B4FQ20|B4FQ20_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 429
Score = 250 bits (638), Expect = 5e-65 Identities = 121/144 (84%), Positives = 135/144 (93%), Gaps = 1/144 (0%) Frame = +3
Query: 162 MAGAASALFLLDMKGRVLIWRDYRGDVSAGQVEKFFSKLIEREGDPSSHDPVVFDD-GVT 338 MAGA SALFLLDMKGRVL+WRDYRGDVSA Q E+FF+KL+++EGD H PVV+DD GVT Sbjct: 1 MAGAVSALFLLDMKGRVLVWRDYRGDVSALQAERFFTKLLDKEGDSEVHSPVVYDDAGVT 60
Query: 339 FMFVQYNNVYVLTAARQNCNAASMLLFLHRVIDVLKHYFEELEEESLRDNFVVVYELLDE 518 +MF+Q+NNV++LTAARQNCNAAS+LLFLHRVIDV KHYFEELEEESLRDNFVVVYELLDE Sbjct: 61 YMFIQHNNVFLLTAARQNCNAASILLFLHRVIDVFKHYFEELEEESLRDNFVVVYELLDE 120
Query: 519 IMDFGYPQYTEAKILSEFIKTDAY 590 +MDFGYPQYTEAKILSEFIKTDAY Sbjct: 121 MMDFGYPQYTEAKILSEFIKTDAY 144
>tr|O22715|O22715_ARATH Putative Clathrin Coat Assembly protein (Clathrin adaptor medium chain protein MU1B, putative) OS=Arabidopsis thaliana GN=At1g60780 PE=2 SV=1 Length = 428
Score = 249 bits (637), Expect = 6e-65 Identities = 117/143 (81%), Positives = 135/143 (94%) Frame = +3
Query: 162 MAGAASALFLLDMKGRVLIWRDYRGDVSAGQVEKFFSKLIEREGDPSSHDPVVFDDGVTF 341 MAGAASALFLLD+KGRVL+WRDYRGDVSA Q E+FF+KLIE+EGD S+DPV +D+GVT+ Sbjct: 1 MAGAASALFLLDIKGRVLVWRDYRGDVSAAQAERFFTKLIEKEGDSQSNDPVAYDNGVTY 60
Query: 342 MFVQYNNVYVLTAARQNCNAASMLLFLHRVIDVLKHYFEELEEESLRDNFVVVYELLDEI 521 MFVQ++NVY++ A+RQNCNAAS+L FLHRV+DV KHYFEELEEESLRDNFVVVYELLDE+ Sbjct: 61 MFVQHSNVYLMIASRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEM 120
Query: 522 MDFGYPQYTEAKILSEFIKTDAY 590 MDFGYPQYTEA+ILSEFIKTDAY Sbjct: 121 MDFGYPQYTEARILSEFIKTDAY 143
>tr|Q5N9S2|Q5N9S2_ORYSJ Clathrin-associated protein unc-101-like OS=Oryza sativa subsp. japonica GN=P0421H07.27-1 PE=4 SV=1 Length = 357
Score = 248 bits (633), Expect = 2e-64 Identities = 118/144 (81%), Positives = 136/144 (94%), Gaps = 1/144 (0%) Frame = +3
Query: 162 MAGAASALFLLDMKGRVLIWRDYRGDVSAGQVEKFFSKLIEREGDPSSHDPVVFDD-GVT 338 MAGA SALFLLD+KGRVL+WRDYRGDVSA Q E+FF+KL+++EGD +H PVV+DD GVT Sbjct: 1 MAGAVSALFLLDIKGRVLVWRDYRGDVSALQAERFFTKLLDKEGDSEAHSPVVYDDAGVT 60
Query: 339 FMFVQYNNVYVLTAARQNCNAASMLLFLHRVIDVLKHYFEELEEESLRDNFVVVYELLDE 518 +MF+Q+NNV++LTA+RQNCNAAS+LLFLHRV+DV KHYFEELEEESLRDNFVVVYELLDE Sbjct: 61 YMFIQHNNVFLLTASRQNCNAASILLFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDE 120
Query: 519 IMDFGYPQYTEAKILSEFIKTDAY 590 +MDFGYPQYTEAKILSEFIKTDAY Sbjct: 121 MMDFGYPQYTEAKILSEFIKTDAY 144
>tr|Q0JK13|Q0JK13_ORYSJ Os01g0703600 protein (Putative uncharacterized protein) OS=Oryza sativa subsp. japonica GN=Os01g0703600 PE=4 SV=1 Length = 429
Score = 248 bits (633), Expect = 2e-64 Identities = 118/144 (81%), Positives = 136/144 (94%), Gaps = 1/144 (0%) Frame = +3
Query: 162 MAGAASALFLLDMKGRVLIWRDYRGDVSAGQVEKFFSKLIEREGDPSSHDPVVFDD-GVT 338 MAGA SALFLLD+KGRVL+WRDYRGDVSA Q E+FF+KL+++EGD +H PVV+DD GVT Sbjct: 1 MAGAVSALFLLDIKGRVLVWRDYRGDVSALQAERFFTKLLDKEGDSEAHSPVVYDDAGVT 60
Query: 339 FMFVQYNNVYVLTAARQNCNAASMLLFLHRVIDVLKHYFEELEEESLRDNFVVVYELLDE 518 +MF+Q+NNV++LTA+RQNCNAAS+LLFLHRV+DV KHYFEELEEESLRDNFVVVYELLDE Sbjct: 61 YMFIQHNNVFLLTASRQNCNAASILLFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDE 120
Query: 519 IMDFGYPQYTEAKILSEFIKTDAY 590 +MDFGYPQYTEAKILSEFIKTDAY Sbjct: 121 MMDFGYPQYTEAKILSEFIKTDAY 144
>tr|A9TRS4|A9TRS4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_108647 PE=4 SV=1 Length = 427
Score = 248 bits (633), Expect = 2e-64 Identities = 115/143 (80%), Positives = 136/143 (95%) Frame = +3
Query: 162 MAGAASALFLLDMKGRVLIWRDYRGDVSAGQVEKFFSKLIEREGDPSSHDPVVFDDGVTF 341 M+GAASA+FLLDMKGRVLIWRDYRGDVSA Q E+ F+KL++ EGDP+SH P++ D+GVT+ Sbjct: 1 MSGAASAIFLLDMKGRVLIWRDYRGDVSAPQAERAFAKLMDGEGDPASHAPLLLDNGVTY 60
Query: 342 MFVQYNNVYVLTAARQNCNAASMLLFLHRVIDVLKHYFEELEEESLRDNFVVVYELLDEI 521 +F+Q+NNVYV+TA+RQNCNAAS++LFLHR++DV KHYFEELEEESLRDNFVVVYELLDE+ Sbjct: 61 LFIQHNNVYVMTASRQNCNAASLVLFLHRIVDVFKHYFEELEEESLRDNFVVVYELLDEM 120
Query: 522 MDFGYPQYTEAKILSEFIKTDAY 590 MDFGYPQYTEAKILSEFIKTDAY Sbjct: 121 MDFGYPQYTEAKILSEFIKTDAY 143
>tr|A2WU74|A2WU74_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_03424 PE=4 SV=1 Length = 429
Score = 248 bits (633), Expect = 2e-64 Identities = 118/144 (81%), Positives = 136/144 (94%), Gaps = 1/144 (0%) Frame = +3
Query: 162 MAGAASALFLLDMKGRVLIWRDYRGDVSAGQVEKFFSKLIEREGDPSSHDPVVFDD-GVT 338 MAGA SALFLLD+KGRVL+WRDYRGDVSA Q E+FF+KL+++EGD +H PVV+DD GVT Sbjct: 1 MAGAVSALFLLDIKGRVLVWRDYRGDVSALQAERFFTKLLDKEGDSEAHSPVVYDDAGVT 60
Query: 339 FMFVQYNNVYVLTAARQNCNAASMLLFLHRVIDVLKHYFEELEEESLRDNFVVVYELLDE 518 +MF+Q+NNV++LTA+RQNCNAAS+LLFLHRV+DV KHYFEELEEESLRDNFVVVYELLDE Sbjct: 61 YMFIQHNNVFLLTASRQNCNAASILLFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDE 120
Query: 519 IMDFGYPQYTEAKILSEFIKTDAY 590 +MDFGYPQYTEAKILSEFIKTDAY Sbjct: 121 MMDFGYPQYTEAKILSEFIKTDAY 144
>tr|A9TUU6|A9TUU6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_172080 PE=4 SV=1 Length = 427
Score = 248 bits (632), Expect = 2e-64 Identities = 114/143 (79%), Positives = 136/143 (95%) Frame = +3
Query: 162 MAGAASALFLLDMKGRVLIWRDYRGDVSAGQVEKFFSKLIEREGDPSSHDPVVFDDGVTF 341 M+GAASA+FLLDMKGRVLIWRDYRGDVS+ Q E+ F+KL++ E DP+SHDP++ ++GVT+ Sbjct: 1 MSGAASAIFLLDMKGRVLIWRDYRGDVSSVQAERAFAKLMDGENDPASHDPILLENGVTY 60
Query: 342 MFVQYNNVYVLTAARQNCNAASMLLFLHRVIDVLKHYFEELEEESLRDNFVVVYELLDEI 521 +F+Q+NNVYV+TA+RQNCNAAS+LLFLHR++DV KHYFEELEEESLRDNFVVVYELLDE+ Sbjct: 61 LFIQHNNVYVMTASRQNCNAASLLLFLHRIVDVFKHYFEELEEESLRDNFVVVYELLDEM 120
Query: 522 MDFGYPQYTEAKILSEFIKTDAY 590 MDFGYPQYTEAKILSEFIKTDAY Sbjct: 121 MDFGYPQYTEAKILSEFIKTDAY 143
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