| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK958338|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0030_L21, 5'
(647 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q0CR95|PABP_ASPTN Polyadenylate-binding protein, cytoplasmic ... 149 2e-35
sp|Q4WK03|PABP_ASPFU Polyadenylate-binding protein, cytoplasmic ... 149 2e-35
sp|Q2UK72|PABP_ASPOR Polyadenylate-binding protein, cytoplasmic ... 148 3e-35
sp|A1D4K4|PABP_NEOFI Polyadenylate-binding protein, cytoplasmic ... 147 4e-35
sp|A2Q848|PABP_ASPNC Polyadenylate-binding protein, cytoplasmic ... 147 6e-35
sp|A1CRM1|PABP_ASPCL Polyadenylate-binding protein, cytoplasmic ... 147 6e-35
sp|Q7S6N6|PABP_NEUCR Polyadenylate-binding protein, cytoplasmic ... 145 1e-34
sp|Q6FKG4|PABP_CANGA Polyadenylate-binding protein, cytoplasmic ... 145 2e-34
sp|Q0U1G2|PABP_PHANO Polyadenylate-binding protein, cytoplasmic ... 144 3e-34
sp|Q1DXH0|PABP_COCIM Polyadenylate-binding protein, cytoplasmic ... 144 5e-34
sp|A4QUF0|PABP_MAGGR Polyadenylate-binding protein, cytoplasmic ... 143 9e-34
sp|Q2GSX8|PABP_CHAGB Polyadenylate-binding protein, cytoplasmic ... 143 9e-34
sp|Q5B630|PABP_EMENI Polyadenylate-binding protein, cytoplasmic ... 142 1e-33
sp|Q5KBW2|PABP_CRYNE Polyadenylate-binding protein, cytoplasmic ... 142 1e-33
sp|P42731|PABP2_ARATH Polyadenylate-binding protein 2 OS=Arabido... 142 1e-33
sp|Q6IP09|PABPB_XENLA Polyadenylate-binding protein 1-B OS=Xenop... 140 4e-33
sp|Q9EPH8|PABP1_RAT Polyadenylate-binding protein 1 OS=Rattus no... 140 4e-33
sp|P29341|PABP1_MOUSE Polyadenylate-binding protein 1 OS=Mus mus... 140 4e-33
sp|P11940|PABP1_HUMAN Polyadenylate-binding protein 1 OS=Homo sa... 140 4e-33
sp|P61286|PABP1_BOVIN Polyadenylate-binding protein 1 OS=Bos tau... 140 4e-33
sp|Q5R8F7|PABP1_PONAB Polyadenylate-binding protein 1 OS=Pongo a... 139 1e-32
sp|P04147|PABP_YEAST Polyadenylate-binding protein, cytoplasmic ... 139 2e-32
sp|Q13310|PABP4_HUMAN Polyadenylate-binding protein 4 OS=Homo sa... 139 2e-32
sp|P31209|PABP_SCHPO Polyadenylate-binding protein, cytoplasmic ... 137 5e-32
sp|A5DM21|PABP_PICGU Polyadenylate-binding protein, cytoplasmic ... 137 6e-32
sp|A5DW14|PABP_LODEL Polyadenylate-binding protein, cytoplasmic ... 137 6e-32
sp|Q9H361|PABP3_HUMAN Polyadenylate-binding protein 3 OS=Homo sa... 137 6e-32
sp|P20965|PABPA_XENLA Polyadenylate-binding protein 1-A OS=Xenop... 136 8e-32
sp|Q5JQF8|PAP1M_HUMAN Polyadenylate-binding protein 1-like 2 OS=... 136 1e-31
sp|Q4VXU2|PAP1L_HUMAN Polyadenylate-binding protein 1-like OS=Ho... 135 2e-31
>sp|Q0CR95|PABP_ASPTN Polyadenylate-binding protein, cytoplasmic and
nuclear OS=Aspergillus terreus (strain NIH 2624) GN=pab1
PE=3 SV=1
Length = 753
Score = 149 bits (375), Expect = 2e-35
Identities = 72/112 (64%), Positives = 87/112 (77%)
Frame = +1
Query: 310 SPSQYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQ 489
S SQ S SLYVG+LDPSVTEA LYE+FS +GQV SI+VCRD ++++SLGYAYVNYNN
Sbjct: 41 STSQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTA 100
Query: 490 DASHALELLNFTFVNGKSIRIMHSHRDPSIRKSGAANIFIKNLEKDIDNKTL 645
D ALE LN+T + GK RIM S RDP++RK+G N+FIKNL+ IDNK L
Sbjct: 101 DGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDAAIDNKAL 152
Score = 56.6 bits (135), Expect = 1e-07
Identities = 35/121 (28%), Positives = 63/121 (52%), Gaps = 16/121 (13%)
Frame = +1
Query: 331 TSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDASHALE 510
T++Y+ +LD ++E + ++F + G++ S + RD KS G+ +VNY+ A A++
Sbjct: 229 TNVYIKNLDQEISEEEFRQMFEKFGEITSATLSRD-QEGKSRGFGFVNYSTHDSAQAAVD 287
Query: 511 LLNFTFVNGKSI---RIMHSH-RDPSIRKSGAA------------NIFIKNLEKDIDNKT 642
+N V G+ + R H R+ +RK A N+++KNL DID++
Sbjct: 288 EMNDKEVKGQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDDIDDEK 347
Query: 643 L 645
L
Sbjct: 348 L 348
Score = 55.1 bits (131), Expect = 3e-07
Identities = 29/108 (26%), Positives = 62/108 (57%), Gaps = 6/108 (5%)
Frame = +1
Query: 334 SLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDASHALEL 513
++++ +LD ++ L++ F+ G ++S KV +D S GY +V+Y + A++A++
Sbjct: 137 NVFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETAEAANNAIKH 195
Query: 514 LNFTFVNGKSIRIMH--SHRDPSIR----KSGAANIFIKNLEKDIDNK 639
+N +N K + + H S +D + K+ N++IKNL+++I +
Sbjct: 196 VNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNLDQEISEE 243
Score = 33.1 bits (74), Expect = 1.3
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +1
Query: 316 SQYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRD 435
S+Y +LYV +L + + +L E+F+ G + S KV RD
Sbjct: 327 SKYQGVNLYVKNLTDDIDDEKLREMFAPYGTITSAKVMRD 366
>sp|Q4WK03|PABP_ASPFU Polyadenylate-binding protein, cytoplasmic and
nuclear OS=Aspergillus fumigatus GN=pab1 PE=3 SV=1
Length = 753
Score = 149 bits (375), Expect = 2e-35
Identities = 72/112 (64%), Positives = 87/112 (77%)
Frame = +1
Query: 310 SPSQYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQ 489
S SQ S SLYVG+LDPSVTEA LYE+FS +GQV SI+VCRD ++++SLGYAYVNYNN
Sbjct: 45 SASQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTA 104
Query: 490 DASHALELLNFTFVNGKSIRIMHSHRDPSIRKSGAANIFIKNLEKDIDNKTL 645
D ALE LN+T + GK RIM S RDP++RK+G N+FIKNL+ IDNK L
Sbjct: 105 DGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDAAIDNKAL 156
Score = 53.9 bits (128), Expect = 7e-07
Identities = 27/108 (25%), Positives = 63/108 (58%), Gaps = 6/108 (5%)
Frame = +1
Query: 334 SLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDASHALEL 513
++++ +LD ++ L++ F+ G ++S KV +D S GY +V+Y + A++A++
Sbjct: 141 NVFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETAEAANNAIKH 199
Query: 514 LNFTFVNGKSIRIMH--SHRDPSIR----KSGAANIFIKNLEKDIDNK 639
+N +N K + + H S +D + K+ N++IKN+++++ ++
Sbjct: 200 VNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNIDQEVTDE 247
Score = 53.9 bits (128), Expect = 7e-07
Identities = 32/121 (26%), Positives = 63/121 (52%), Gaps = 16/121 (13%)
Frame = +1
Query: 331 TSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDASHALE 510
T++Y+ ++D VT+ + ++F + G++ S + RD KS G+ +VN++ A A++
Sbjct: 233 TNVYIKNIDQEVTDEEFRKMFEKFGEITSATLSRD-QEGKSRGFGFVNFSTHDSAQAAVD 291
Query: 511 LLNFTFVNGKSI---RIMHSH-RDPSIRKSGAA------------NIFIKNLEKDIDNKT 642
+N + G+ + R H R+ +RK A N+++KNL D+D++
Sbjct: 292 EMNDKEIKGQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDDVDDEK 351
Query: 643 L 645
L
Sbjct: 352 L 352
Score = 39.3 bits (90), Expect = 0.018
Identities = 34/146 (23%), Positives = 56/146 (38%), Gaps = 46/146 (31%)
Frame = +1
Query: 316 SQYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSK---------------- 447
S+Y +LYV +L V + +L E+FS G + S KV RD ++
Sbjct: 331 SKYQGVNLYVKNLTDDVDDEKLRELFSPFGTITSAKVMRDTVTTGETSESEKEKEKESNK 390
Query: 448 ------------------------------KSLGYAYVNYNNGQDASHALELLNFTFVNG 537
KS G+ +V +++ +AS A+ +N VNG
Sbjct: 391 ENEKEGEEKTEEKPKESEEEPKKTEKKILGKSKGFGFVCFSSPDEASKAVTEMNQRMVNG 450
Query: 538 KSIRIMHSHRDPSIRKSGAANIFIKN 615
K + + + R R A+I +N
Sbjct: 451 KPLYVALAQRKDVRRSQLEASIQARN 476
>sp|Q2UK72|PABP_ASPOR Polyadenylate-binding protein, cytoplasmic and
nuclear OS=Aspergillus oryzae GN=pab1 PE=3 SV=1
Length = 765
Score = 148 bits (373), Expect = 3e-35
Identities = 71/110 (64%), Positives = 86/110 (78%)
Frame = +1
Query: 316 SQYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDA 495
SQ S SLYVG+LDPSVTEA LYE+FS +GQV SI+VCRD ++++SLGYAYVNYNN D
Sbjct: 44 SQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADG 103
Query: 496 SHALELLNFTFVNGKSIRIMHSHRDPSIRKSGAANIFIKNLEKDIDNKTL 645
ALE LN+T + GK RIM S RDP++RK+G N+FIKNL+ IDNK L
Sbjct: 104 ERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKAL 153
Score = 55.1 bits (131), Expect = 3e-07
Identities = 28/105 (26%), Positives = 61/105 (58%), Gaps = 6/105 (5%)
Frame = +1
Query: 334 SLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDASHALEL 513
++++ +LD ++ L++ F+ G ++S KV +D S GY +V+Y + A++A++
Sbjct: 138 NVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETAEAANNAIKH 196
Query: 514 LNFTFVNGKSIRIMH--SHRDPSIR----KSGAANIFIKNLEKDI 630
+N +N K + + H S +D + K+ N++IKN+++D+
Sbjct: 197 VNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNIDQDV 241
Score = 54.7 bits (130), Expect = 4e-07
Identities = 33/121 (27%), Positives = 63/121 (52%), Gaps = 16/121 (13%)
Frame = +1
Query: 331 TSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDASHALE 510
T++Y+ ++D VTE + E+F + G++ S + RD KS G+ +VN++ + A A++
Sbjct: 230 TNVYIKNIDQDVTEEEFRELFEKFGEITSATLSRD-QEGKSRGFGFVNFSTHESAQAAVD 288
Query: 511 LLNFTFVNGKSI---RIMHSH-RDPSIRKSGAA------------NIFIKNLEKDIDNKT 642
+N + + + R H R+ +RK A N+++KNL D+D++
Sbjct: 289 EMNEKEIRTQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDDVDDEK 348
Query: 643 L 645
L
Sbjct: 349 L 349
Score = 33.5 bits (75), Expect = 0.98
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +1
Query: 316 SQYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRD 435
S+Y +LYV +L V + +L E+F G + S KV RD
Sbjct: 328 SKYQGVNLYVKNLTDDVDDEKLRELFGPYGTITSAKVMRD 367
>sp|A1D4K4|PABP_NEOFI Polyadenylate-binding protein, cytoplasmic and
nuclear OS=Neosartorya fischeri (strain ATCC 1020 / DSM
3700 / NRRL 181) GN=pab1 PE=3 SV=1
Length = 751
Score = 147 bits (372), Expect = 4e-35
Identities = 71/112 (63%), Positives = 87/112 (77%)
Frame = +1
Query: 310 SPSQYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQ 489
S +Q S SLYVG+LDPSVTEA LYE+FS +GQV SI+VCRD ++++SLGYAYVNYNN
Sbjct: 45 SANQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTA 104
Query: 490 DASHALELLNFTFVNGKSIRIMHSHRDPSIRKSGAANIFIKNLEKDIDNKTL 645
D ALE LN+T + GK RIM S RDP++RK+G N+FIKNL+ IDNK L
Sbjct: 105 DGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDAAIDNKAL 156
Score = 53.9 bits (128), Expect = 7e-07
Identities = 27/108 (25%), Positives = 63/108 (58%), Gaps = 6/108 (5%)
Frame = +1
Query: 334 SLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDASHALEL 513
++++ +LD ++ L++ F+ G ++S KV +D S GY +V+Y + A++A++
Sbjct: 141 NVFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETAEAANNAIKH 199
Query: 514 LNFTFVNGKSIRIMH--SHRDPSIR----KSGAANIFIKNLEKDIDNK 639
+N +N K + + H S +D + K+ N++IKN+++++ ++
Sbjct: 200 VNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNIDQEVTDE 247
Score = 53.9 bits (128), Expect = 7e-07
Identities = 32/121 (26%), Positives = 63/121 (52%), Gaps = 16/121 (13%)
Frame = +1
Query: 331 TSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDASHALE 510
T++Y+ ++D VT+ + ++F + G++ S + RD KS G+ +VN++ A A++
Sbjct: 233 TNVYIKNIDQEVTDEEFRKMFEKFGEITSATLSRD-QEGKSRGFGFVNFSTHDSAQAAVD 291
Query: 511 LLNFTFVNGKSI---RIMHSH-RDPSIRKSGAA------------NIFIKNLEKDIDNKT 642
+N + G+ + R H R+ +RK A N+++KNL D+D++
Sbjct: 292 EMNDKEIKGQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDDVDDEK 351
Query: 643 L 645
L
Sbjct: 352 L 352
Score = 40.0 bits (92), Expect = 0.010
Identities = 34/144 (23%), Positives = 56/144 (38%), Gaps = 44/144 (30%)
Frame = +1
Query: 316 SQYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSK---------------- 447
S+Y +LYV +L V + +L E+FS G + S KV RD ++
Sbjct: 331 SKYQGVNLYVKNLTDDVDDEKLRELFSPFGTITSAKVMRDTVTAGETSESEKEKESNKEN 390
Query: 448 ----------------------------KSLGYAYVNYNNGQDASHALELLNFTFVNGKS 543
KS G+ +V +++ +AS A+ +N VNGK
Sbjct: 391 EKEGEEKTEEKPKESEEEAKKTEKKILGKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKP 450
Query: 544 IRIMHSHRDPSIRKSGAANIFIKN 615
+ + + R R A+I +N
Sbjct: 451 LYVALAQRKDVRRSQLEASIQARN 474
>sp|A2Q848|PABP_ASPNC Polyadenylate-binding protein, cytoplasmic and
nuclear OS=Aspergillus niger (strain CBS 513.88 / FGSC
A1513) GN=pab1 PE=3 SV=1
Length = 731
Score = 147 bits (370), Expect = 6e-35
Identities = 69/106 (65%), Positives = 84/106 (79%)
Frame = +1
Query: 328 STSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDASHAL 507
S SLYVG+LDPSVTEA LYE+FS +GQV SI+VCRD ++++SLGYAYVNYNN D AL
Sbjct: 53 SASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERAL 112
Query: 508 ELLNFTFVNGKSIRIMHSHRDPSIRKSGAANIFIKNLEKDIDNKTL 645
E LN+T + GK RIM S RDP++RK+G N+FIKNL+ IDNK L
Sbjct: 113 EDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKAL 158
Score = 57.0 bits (136), Expect = 8e-08
Identities = 30/107 (28%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Frame = +1
Query: 334 SLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDASHALEL 513
++++ +LD ++ L++ F+ G ++S KV +D S GY +V+Y + A++A++
Sbjct: 143 NVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETAEAANNAIKH 201
Query: 514 LNFTFVNGKSIRIMH--SHRDPSIR----KSGAANIFIKNLEKDIDN 636
+N +N K + + H S +D + K+ N++IKNL+ +ID+
Sbjct: 202 VNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNLDSEIDD 248
Score = 51.6 bits (122), Expect = 3e-06
Identities = 32/121 (26%), Positives = 62/121 (51%), Gaps = 16/121 (13%)
Frame = +1
Query: 331 TSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDASHALE 510
T++Y+ +LD + + + ++F + G++ S + RD KS G+ +VN++ + A A+E
Sbjct: 235 TNVYIKNLDSEIDDDEFRKMFEKFGEITSATLSRD-QEGKSRGFGFVNFSTHESAQAAVE 293
Query: 511 LLNFTFVNGKSI---RIMHSH-RDPSIRKSGAA------------NIFIKNLEKDIDNKT 642
+N + + + R H R+ +RK A N+++KNL DID++
Sbjct: 294 EMNDKEIRSQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDDIDDEK 353
Query: 643 L 645
L
Sbjct: 354 L 354
Score = 33.1 bits (74), Expect = 1.3
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 316 SQYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRD 435
S+Y +LYV +L + + +L E+F G + S KV RD
Sbjct: 333 SKYQGVNLYVKNLTDDIDDEKLRELFGPYGTITSAKVMRD 372
>sp|A1CRM1|PABP_ASPCL Polyadenylate-binding protein, cytoplasmic and
nuclear OS=Aspergillus clavatus GN=pab1 PE=3 SV=1
Length = 754
Score = 147 bits (370), Expect = 6e-35
Identities = 69/106 (65%), Positives = 84/106 (79%)
Frame = +1
Query: 328 STSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDASHAL 507
S SLYVG+LDPSVTEA LYE+FS +GQV SI+VCRD ++++SLGYAYVNYNN D AL
Sbjct: 50 SASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERAL 109
Query: 508 ELLNFTFVNGKSIRIMHSHRDPSIRKSGAANIFIKNLEKDIDNKTL 645
E LN+T + GK RIM S RDP++RK+G N+FIKNL+ IDNK L
Sbjct: 110 EDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKAL 155
Score = 58.2 bits (139), Expect = 4e-08
Identities = 36/121 (29%), Positives = 64/121 (52%), Gaps = 16/121 (13%)
Frame = +1
Query: 331 TSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDASHALE 510
T++Y+ ++DP VTE + +IF Q G++ S + RD KS G+ +VNY+ + A A++
Sbjct: 232 TNIYIKNIDPDVTEEEFRKIFEQFGEITSATLSRD-PEGKSRGFGFVNYSTHESAQAAVD 290
Query: 511 LLNFTFVNGKSI---RIMHSH-RDPSIRKSGAA------------NIFIKNLEKDIDNKT 642
++ V + + R H R+ +RK A N+++KNL D+D++
Sbjct: 291 EMHDKEVKTQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDDVDDEK 350
Query: 643 L 645
L
Sbjct: 351 L 351
Score = 54.7 bits (130), Expect = 4e-07
Identities = 29/105 (27%), Positives = 60/105 (57%), Gaps = 6/105 (5%)
Frame = +1
Query: 334 SLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDASHALEL 513
++++ +LD ++ L++ F+ G ++S KV +D S GY +V+Y + A++A++
Sbjct: 140 NVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETAEAANNAIKH 198
Query: 514 LNFTFVNGKSIRIMH--SHRDPSIR----KSGAANIFIKNLEKDI 630
+N +N K + + H S +D + K+ NI+IKN++ D+
Sbjct: 199 VNGMLLNDKKVFVGHHISKKDRQSKFDEMKANFTNIYIKNIDPDV 243
Score = 33.5 bits (75), Expect = 0.98
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +1
Query: 316 SQYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRD 435
S+Y +LYV +L V + +L E+F G + S KV RD
Sbjct: 330 SKYQGVNLYVKNLTDDVDDEKLRELFGPYGTITSAKVMRD 369
>sp|Q7S6N6|PABP_NEUCR Polyadenylate-binding protein, cytoplasmic and
nuclear OS=Neurospora crassa GN=pab-1 PE=3 SV=1
Length = 764
Score = 145 bits (367), Expect = 1e-34
Identities = 69/112 (61%), Positives = 86/112 (76%)
Frame = +1
Query: 310 SPSQYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQ 489
+P S SLYVG+LDPSVTEA L+E+FSQ+G V SI+VCRD ++++SLGYAYVNYN
Sbjct: 53 APHPQASASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTA 112
Query: 490 DASHALELLNFTFVNGKSIRIMHSHRDPSIRKSGAANIFIKNLEKDIDNKTL 645
D ALE LN+T + G+ RIM S RDP++RK+GA NIFIKNL+ IDNK L
Sbjct: 113 DGEKALEELNYTLIKGRPCRIMWSQRDPALRKTGAGNIFIKNLDAAIDNKAL 164
Score = 55.8 bits (133), Expect = 2e-07
Identities = 37/121 (30%), Positives = 64/121 (52%), Gaps = 16/121 (13%)
Frame = +1
Query: 331 TSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDASHALE 510
T++YV +++ VT+ + E+F++ G+V S + RD KS G+ +VN+ + A+ A++
Sbjct: 241 TNVYVKNINNEVTDEEFRELFAKFGEVTSSSLARD-QEGKSRGFGFVNFTTHEAAAQAVD 299
Query: 511 LLNFTFVNGKSI---RIMHSH-RDPSIRKSGAA------------NIFIKNLEKDIDNKT 642
LN G+ + R H R+ +RKS A N++IKNL D+D+
Sbjct: 300 ELNGKDFRGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLGDDVDDDK 359
Query: 643 L 645
L
Sbjct: 360 L 360
Score = 50.4 bits (119), Expect = 8e-06
Identities = 26/108 (24%), Positives = 59/108 (54%), Gaps = 6/108 (5%)
Frame = +1
Query: 334 SLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDASHALEL 513
++++ +LD ++ L++ F+ G ++S KV +D S GY +V+Y + AS A++
Sbjct: 149 NIFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEHGN-SKGYGFVHYETDEAASQAIKH 207
Query: 514 LNFTFVNGKSIRIMH--SHRDPSIR----KSGAANIFIKNLEKDIDNK 639
+N +N K + + H +D + K+ N+++KN+ ++ ++
Sbjct: 208 VNGMLLNEKKVYVGHHIPKKDRQSKFEEMKANFTNVYVKNINNEVTDE 255
Score = 37.4 bits (85), Expect = 0.068
Identities = 30/131 (22%), Positives = 54/131 (41%), Gaps = 40/131 (30%)
Frame = +1
Query: 316 SQYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSK---------------- 447
++Y +LY+ +L V + +L +FS+ G + S KV RD + +
Sbjct: 339 NKYQGVNLYIKNLGDDVDDDKLRAMFSEYGPITSAKVMRDSLIEGSEEKDEKDKENKKEG 398
Query: 448 ------------------------KSLGYAYVNYNNGQDASHALELLNFTFVNGKSIRIM 555
KS G+ +V ++N DA+ A+ +N V+GK + +
Sbjct: 399 ETKEEEQNEGSEKKTEKKGDRKLGKSKGFGFVCFSNPDDATKAVTEMNQRMVDGKPLYVA 458
Query: 556 HSHRDPSIRKS 588
+ R +RKS
Sbjct: 459 LAQR-KDVRKS 468
>sp|Q6FKG4|PABP_CANGA Polyadenylate-binding protein, cytoplasmic and
nuclear OS=Candida glabrata GN=PAB1 PE=3 SV=1
Length = 579
Score = 145 bits (365), Expect = 2e-34
Identities = 73/110 (66%), Positives = 85/110 (77%)
Frame = +1
Query: 316 SQYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDA 495
S+ VS SLYVGDLDPSV+EA LY+IFS +G V SI+VCRD ++K SLGYAYVN+N+ A
Sbjct: 30 SETVSASLYVGDLDPSVSEAHLYDIFSPIGAVSSIRVCRDAITKTSLGYAYVNFNDHDAA 89
Query: 496 SHALELLNFTFVNGKSIRIMHSHRDPSIRKSGAANIFIKNLEKDIDNKTL 645
A+E LNFT + GK RIM S RDPS+RK GA NIFIKNL DIDNK L
Sbjct: 90 KTAIEKLNFTPIKGKLCRIMWSQRDPSLRKKGAGNIFIKNLHPDIDNKAL 139
Score = 56.6 bits (135), Expect = 1e-07
Identities = 31/108 (28%), Positives = 57/108 (52%), Gaps = 6/108 (5%)
Frame = +1
Query: 334 SLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDASHALEL 513
++++ +L P + LY+ FS G ++S KV D + KS G+ YV++ + AS A++
Sbjct: 124 NIFIKNLHPDIDNKALYDTFSVFGNILSSKVATD-ETGKSKGFGYVHFEEDESASEAIDA 182
Query: 514 LNFTFVNGKSI----RIMHSHRDPSIR--KSGAANIFIKNLEKDIDNK 639
LN +NG+ I + R+ K+ N++IKN+ + +K
Sbjct: 183 LNGMLLNGQEIYVGPHLSKKERESKFEEMKANFTNVYIKNINTETTDK 230
Score = 46.2 bits (108), Expect = 1e-04
Identities = 31/121 (25%), Positives = 60/121 (49%), Gaps = 16/121 (13%)
Frame = +1
Query: 331 TSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDASHALE 510
T++Y+ +++ T+ + E+ ++ G+ S+ V ++ G+ +VN+ N +DA +E
Sbjct: 216 TNVYIKNINTETTDKEFEELVAKFGKTDSV-VLERTPEGENKGFGFVNFVNHEDAVKCVE 274
Query: 511 LLNFTFVNGKSIRIMHS----HRDPSIRKSGAA------------NIFIKNLEKDIDNKT 642
LN T G+ + + + R ++K A N+FIKNL+ ID+K
Sbjct: 275 ELNNTEFKGQPLYVNRAQKKYERQQELKKQYEATRMEKMAKYQGINLFIKNLDDSIDDKK 334
Query: 643 L 645
L
Sbjct: 335 L 335
>sp|Q0U1G2|PABP_PHANO Polyadenylate-binding protein, cytoplasmic and
nuclear OS=Phaeosphaeria nodorum GN=PAB1 PE=3 SV=3
Length = 744
Score = 144 bits (364), Expect = 3e-34
Identities = 67/106 (63%), Positives = 85/106 (80%)
Frame = +1
Query: 328 STSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDASHAL 507
S SLYVG+LDPSVTEA L+E+FS +GQV SI+VCRD ++++SLGYAYVNYN+ +D AL
Sbjct: 47 SASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSSEDGEKAL 106
Query: 508 ELLNFTFVNGKSIRIMHSHRDPSIRKSGAANIFIKNLEKDIDNKTL 645
E LN+T + GK RIM S RDP++RK+G N+FIKNL+ IDNK L
Sbjct: 107 EELNYTVIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDHAIDNKAL 152
Score = 54.3 bits (129), Expect = 5e-07
Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 16/121 (13%)
Frame = +1
Query: 331 TSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDASHALE 510
T++YV ++D VT+ E+F + G + S + RD KS G+ +VNY + A+ A++
Sbjct: 229 TNIYVKNIDLDVTDEDFRELFEKHGDITSASIARDDQG-KSRGFGFVNYIRHEAAAVAVD 287
Query: 511 LLNFTFVNGKSI---RIMHSH-RDPSIRKSGAA------------NIFIKNLEKDIDNKT 642
LN G+ + R H R+ +RK A N++IKNL D+D++
Sbjct: 288 HLNDIEFKGQKLYVGRAQKKHEREEELRKQYEAARLEKQSKYQGVNLYIKNLNDDVDDEK 347
Query: 643 L 645
L
Sbjct: 348 L 348
Score = 52.0 bits (123), Expect = 3e-06
Identities = 28/109 (25%), Positives = 61/109 (55%), Gaps = 7/109 (6%)
Frame = +1
Query: 334 SLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDASHALEL 513
++++ +LD ++ L++ F+ G ++S KV +D + S GY +V+Y + A++A++
Sbjct: 137 NVFIKNLDHAIDNKALHDTFAAFGNILSCKVAQDELGN-SKGYGFVHYETAEAANNAIKH 195
Query: 514 LNFTFVNGKSIRIMHSHRDPSIR-------KSGAANIFIKNLEKDIDNK 639
+N +N K + + H H R K+ NI++KN++ D+ ++
Sbjct: 196 VNGMLLNEKKVFVGH-HIPKKERMSKFEEMKANFTNIYVKNIDLDVTDE 243
>sp|Q1DXH0|PABP_COCIM Polyadenylate-binding protein, cytoplasmic and
nuclear OS=Coccidioides immitis GN=PAB1 PE=3 SV=1
Length = 768
Score = 144 bits (362), Expect = 5e-34
Identities = 67/106 (63%), Positives = 84/106 (79%)
Frame = +1
Query: 328 STSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDASHAL 507
S SLYVG+LDPSVTEA L+E+FS +GQV SI+VCRD ++++SLGYAYVNYNN D AL
Sbjct: 54 SASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERAL 113
Query: 508 ELLNFTFVNGKSIRIMHSHRDPSIRKSGAANIFIKNLEKDIDNKTL 645
E LN+T + G+ RIM S RDP++RK+G N+FIKNL+ IDNK L
Sbjct: 114 EDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKAL 159
Score = 63.2 bits (152), Expect = 1e-09
Identities = 38/121 (31%), Positives = 64/121 (52%), Gaps = 16/121 (13%)
Frame = +1
Query: 331 TSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDASHALE 510
T++YV ++D TE + ++F + G++ S + RD S KS G+ +VN+ + +A+ A+E
Sbjct: 236 TNVYVKNIDQDTTEEEFRDLFEKFGEITSATLARDAESGKSRGFGFVNFTSHDNAAAAVE 295
Query: 511 LLNFTFVNGKSI---RIMHSH-RDPSIRKSGAA------------NIFIKNLEKDIDNKT 642
LN G+ + R H R+ +RK A N++IKNL DID++
Sbjct: 296 ALNDKDFKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQGVNLYIKNLSDDIDDEK 355
Query: 643 L 645
L
Sbjct: 356 L 356
Score = 52.0 bits (123), Expect = 3e-06
Identities = 26/104 (25%), Positives = 59/104 (56%), Gaps = 6/104 (5%)
Frame = +1
Query: 334 SLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDASHALEL 513
++++ +LD ++ L++ F+ G ++S KV +D S GY +V+Y + A +A++
Sbjct: 144 NVFIKNLDTAIDNKALHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETAEAAQNAIKH 202
Query: 514 LNFTFVNGKSIRIMH--SHRDPSIR----KSGAANIFIKNLEKD 627
+N +N K + + H + +D + K+ N+++KN+++D
Sbjct: 203 VNGMLLNDKKVFVGHHIAKKDRQSKFEEMKANFTNVYVKNIDQD 246
Score = 35.0 bits (79), Expect = 0.34
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +1
Query: 316 SQYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRD 435
S+Y +LY+ +L + + +L E+FS G + S KV RD
Sbjct: 335 SKYQGVNLYIKNLSDDIDDEKLRELFSSYGTITSAKVMRD 374
|
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK958338|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0030_L21, 5'
(647 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|A9S663|A9S663_PHYPA Predicted protein OS=Physcomitrella paten... 184 3e-45
tr|Q39953|Q39953_ANEPH Poly(A)-mRNA binding protein OS=Anemia ph... 180 8e-44
tr|A9SVZ7|A9SVZ7_PHYPA Predicted protein OS=Physcomitrella paten... 179 1e-43
tr|A9TLC5|A9TLC5_PHYPA Predicted protein OS=Physcomitrella paten... 178 2e-43
tr|A9TPK9|A9TPK9_PHYPA Predicted protein OS=Physcomitrella paten... 174 4e-42
tr|Q9M549|Q9M549_CUCSA Poly(A)-binding protein OS=Cucumis sativu... 163 7e-39
tr|P93616|P93616_WHEAT Poly(A)-binding protein OS=Triticum aesti... 159 1e-37
tr|A7PLE6|A7PLE6_VITVI Chromosome chr7 scaffold_20, whole genome... 159 1e-37
tr|A5BR81|A5BR81_VITVI Putative uncharacterized protein (Chromos... 159 2e-37
tr|A5B5N0|A5B5N0_VITVI Putative uncharacterized protein (Chromos... 159 2e-37
tr|B7FM14|B7FM14_MEDTR Putative uncharacterized protein (Fragmen... 158 3e-37
tr|Q6YYV1|Q6YYV1_ORYSJ Os09g0115400 protein OS=Oryza sativa subs... 155 2e-36
tr|A2YYH2|A2YYH2_ORYSI Putative uncharacterized protein OS=Oryza... 155 2e-36
tr|Q7X675|Q7X675_ORYSA OSJNBa0014K14.19 protein OS=Oryza sativa ... 154 4e-36
tr|Q7F8Y1|Q7F8Y1_ORYSJ Os04g0504800 protein OS=Oryza sativa subs... 154 4e-36
tr|B8ARD0|B8ARD0_ORYSI Putative uncharacterized protein OS=Oryza... 154 4e-36
tr|Q6Z050|Q6Z050_ORYSJ Os08g0314800 protein OS=Oryza sativa subs... 154 6e-36
tr|Q6UUN6|Q6UUN6_ORYSJ Putative poly(A)-binding protein (Putativ... 154 6e-36
tr|A2YTU1|A2YTU1_ORYSI Putative uncharacterized protein OS=Oryza... 154 6e-36
tr|Q9M6E6|Q9M6E6_TOBAC Poly(A)-binding protein OS=Nicotiana taba... 153 1e-35
tr|A5C1F3|A5C1F3_VITVI Putative uncharacterized protein OS=Vitis... 153 1e-35
tr|Q9AT32|Q9AT32_DAUCA Poly(A)-binding protein OS=Daucus carota ... 152 2e-35
tr|B6U4M0|B6U4M0_MAIZE Polyadenylate-binding protein 2 OS=Zea ma... 152 2e-35
tr|Q014N8|Q014N8_OSTTA Polyadenylate-binding protein, putative /... 150 6e-35
tr|A4S0L2|A4S0L2_OSTLU Predicted protein OS=Ostreococcus lucimar... 149 1e-34
tr|B0XND2|B0XND2_ASPFC Polyadenylate-binding protein OS=Aspergil... 149 2e-34
tr|B8N3I8|B8N3I8_ASPFL Polyadenylate-binding protein OS=Aspergil... 148 3e-34
tr|B8MGJ6|B8MGJ6_9EURO Polyadenylate-binding protein OS=Talaromy... 147 7e-34
tr|B6QKP6|B6QKP6_PENMA Polyadenylate-binding protein OS=Penicill... 147 7e-34
tr|B6H844|B6H844_PENCH Pc16g09030 protein OS=Penicillium chrysog... 147 7e-34
>tr|A9S663|A9S663_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_124737 PE=4 SV=1
Length = 439
Score = 184 bits (468), Expect = 3e-45
Identities = 89/112 (79%), Positives = 104/112 (92%)
Frame = +1
Query: 310 SPSQYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQ 489
+P+Q+VSTSLYVGDL+P+V+EAQLYE+FSQVGQVVSI+VCRDL++++SLGY+YVNYNN Q
Sbjct: 17 APTQFVSTSLYVGDLEPNVSEAQLYEMFSQVGQVVSIRVCRDLITRRSLGYSYVNYNNAQ 76
Query: 490 DASHALELLNFTFVNGKSIRIMHSHRDPSIRKSGAANIFIKNLEKDIDNKTL 645
DA+ ALELLNFT VNGK IRIM SHRDPSIRKSG ANIFIKNL+K IDNK L
Sbjct: 77 DATRALELLNFTGVNGKPIRIMFSHRDPSIRKSGTANIFIKNLDKSIDNKAL 128
Score = 44.3 bits (103), Expect = 0.006
Identities = 23/83 (27%), Positives = 47/83 (56%)
Frame = +1
Query: 319 QYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDAS 498
+Y +LY+ +LD +V + ++ E+F++ G + S KV RD +S G +V +++ +A+
Sbjct: 302 KYQGVNLYLKNLDDTVDDEKIRELFAEYGTITSCKVMRDHQG-QSKGSGFVAFSSPDEAT 360
Query: 499 HALELLNFTFVNGKSIRIMHSHR 567
A+ +N V K + + + R
Sbjct: 361 RAVTEMNGKMVGNKPLYVALAQR 383
>tr|Q39953|Q39953_ANEPH Poly(A)-mRNA binding protein OS=Anemia
phyllitidis PE=2 SV=1
Length = 638
Score = 180 bits (456), Expect = 8e-44
Identities = 88/110 (80%), Positives = 98/110 (89%)
Frame = +1
Query: 316 SQYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDA 495
S YV+ SLYVGDLDP V+E++LYE+F+Q+GQVVSI+VCRDLM+KKSLGYAYVNY QDA
Sbjct: 21 SPYVAPSLYVGDLDPDVSESELYEVFNQIGQVVSIRVCRDLMTKKSLGYAYVNYGTHQDA 80
Query: 496 SHALELLNFTFVNGKSIRIMHSHRDPSIRKSGAANIFIKNLEKDIDNKTL 645
S ALELLNFT V GK IRIM+SHRDPSIRKSGAANIFIKNLEK IDNK L
Sbjct: 81 SQALELLNFTLVKGKPIRIMYSHRDPSIRKSGAANIFIKNLEKSIDNKAL 130
Score = 40.0 bits (92), Expect = 0.12
Identities = 21/83 (25%), Positives = 45/83 (54%)
Frame = +1
Query: 319 QYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDAS 498
++ +LY+ ++D S+ + +L E+F+ G V S KV + +S+G +V ++ ++A
Sbjct: 303 KFQGVNLYLKNIDDSIDDEKLRELFAVFGTVTSCKVMKSPQG-QSMGSGFVTFSAPEEAM 361
Query: 499 HALELLNFTFVNGKSIRIMHSHR 567
A+ +N V K + + + R
Sbjct: 362 QAVNDMNGKMVGSKPLYVALAQR 384
>tr|A9SVZ7|A9SVZ7_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_216291 PE=4 SV=1
Length = 645
Score = 179 bits (455), Expect = 1e-43
Identities = 88/112 (78%), Positives = 100/112 (89%)
Frame = +1
Query: 310 SPSQYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQ 489
+P +VSTSLYVGDL+ +V+EAQLYEIFSQVGQVVSI+VCRDL++++SLGYAYVNYNN Q
Sbjct: 17 APPNFVSTSLYVGDLESTVSEAQLYEIFSQVGQVVSIRVCRDLITRRSLGYAYVNYNNAQ 76
Query: 490 DASHALELLNFTFVNGKSIRIMHSHRDPSIRKSGAANIFIKNLEKDIDNKTL 645
DA+ ALELLNF VNGK IRIM SHRDPSIRKSG ANIFIKNL+K IDNK L
Sbjct: 77 DATRALELLNFNAVNGKPIRIMFSHRDPSIRKSGTANIFIKNLDKSIDNKAL 128
Score = 48.1 bits (113), Expect = 4e-04
Identities = 26/83 (31%), Positives = 48/83 (57%)
Frame = +1
Query: 319 QYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDAS 498
+Y +LY+ +LD ++ + +L EIFS+ G +VS KV RD +S G +V +++ +A+
Sbjct: 302 KYQGVNLYLKNLDDTIDDEKLREIFSEYGTIVSCKVMRDPQG-QSRGSGFVAFSSPDEAT 360
Query: 499 HALELLNFTFVNGKSIRIMHSHR 567
A+ +N V K + + + R
Sbjct: 361 RAVTEMNGKMVGSKPLYVALAQR 383
>tr|A9TLC5|A9TLC5_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_170712 PE=4 SV=1
Length = 650
Score = 178 bits (452), Expect = 2e-43
Identities = 85/111 (76%), Positives = 102/111 (91%)
Frame = +1
Query: 313 PSQYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQD 492
P+Q+VSTSLYVGDL+P+V+EAQLYE+F+QVGQVVSI+VCRDL++++SLGYAYVNYN+ QD
Sbjct: 22 PAQFVSTSLYVGDLEPNVSEAQLYELFTQVGQVVSIRVCRDLITRRSLGYAYVNYNSAQD 81
Query: 493 ASHALELLNFTFVNGKSIRIMHSHRDPSIRKSGAANIFIKNLEKDIDNKTL 645
A+ ALELLNF+ +NG IRIM SHRDPSIRKSG ANIFIKNL+K IDNK L
Sbjct: 82 ATRALELLNFSVLNGNPIRIMFSHRDPSIRKSGTANIFIKNLDKTIDNKAL 132
Score = 45.1 bits (105), Expect = 0.004
Identities = 24/83 (28%), Positives = 47/83 (56%)
Frame = +1
Query: 319 QYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDAS 498
+Y +LY+ +LD +V + +L E+F+ G + S KV RD +S G +V +++ ++A+
Sbjct: 306 KYQGVNLYLKNLDDTVDDEKLRELFADYGTITSCKVMRDPQG-QSRGSGFVAFSSPEEAT 364
Query: 499 HALELLNFTFVNGKSIRIMHSHR 567
A+ +N V K + + + R
Sbjct: 365 RAVTEMNGKMVGSKPLYVALAQR 387
>tr|A9TPK9|A9TPK9_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_108547 PE=4 SV=1
Length = 647
Score = 174 bits (441), Expect = 4e-42
Identities = 85/112 (75%), Positives = 102/112 (91%)
Frame = +1
Query: 310 SPSQYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQ 489
+P+Q+VSTS+YVGDL+ +V+EAQLYEIFSQ G VVSI+VCRDL++++SLGYAYVNY++ Q
Sbjct: 17 APNQFVSTSVYVGDLEHNVSEAQLYEIFSQTGPVVSIRVCRDLITRRSLGYAYVNYHSAQ 76
Query: 490 DASHALELLNFTFVNGKSIRIMHSHRDPSIRKSGAANIFIKNLEKDIDNKTL 645
DA+ ALELLNFT VNGK IRIM SHRDPS+RKSGAANIFIKNL+K IDNK L
Sbjct: 77 DATRALELLNFTPVNGKPIRIMFSHRDPSLRKSGAANIFIKNLDKAIDNKAL 128
Score = 44.7 bits (104), Expect = 0.005
Identities = 23/83 (27%), Positives = 47/83 (56%)
Frame = +1
Query: 319 QYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDAS 498
+Y +LY+ +LD +V + +L E+F++ G + S KV +D +S G +V ++ ++A+
Sbjct: 302 KYQGVNLYLKNLDDAVDDEKLRELFAEYGTITSCKVMKDPQG-QSRGSGFVAFSTPEEAT 360
Query: 499 HALELLNFTFVNGKSIRIMHSHR 567
A+ +N V K + + + R
Sbjct: 361 RAVTEMNTKMVGSKPLYVALAQR 383
>tr|Q9M549|Q9M549_CUCSA Poly(A)-binding protein OS=Cucumis sativus
PE=2 SV=1
Length = 649
Score = 163 bits (413), Expect = 7e-39
Identities = 76/113 (67%), Positives = 99/113 (87%)
Frame = +1
Query: 307 GSPSQYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNG 486
G +Q+V+TSLYVGDLD +VT++QLY++F+QVGQVVS++VCRDL S++SLGY YVNY+N
Sbjct: 21 GGANQHVTTSLYVGDLDVNVTDSQLYDLFNQVGQVVSVRVCRDLTSRRSLGYGYVNYSNP 80
Query: 487 QDASHALELLNFTFVNGKSIRIMHSHRDPSIRKSGAANIFIKNLEKDIDNKTL 645
DAS AL++LNFT +NG IR+M+SHRDPS+RKSG+ NIFIKNL+K ID+K L
Sbjct: 81 VDASRALDVLNFTPLNGNPIRVMYSHRDPSVRKSGSGNIFIKNLDKAIDHKAL 133
Score = 51.2 bits (121), Expect = 5e-05
Identities = 33/120 (27%), Positives = 62/120 (51%), Gaps = 16/120 (13%)
Frame = +1
Query: 334 SLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDASHALEL 513
+++V +L + +E L +F + G + S+ V RD KS + +VN+ N DA+ ++E
Sbjct: 209 NVFVKNLAETTSEEDLKNMFGEFGPITSVVVMRD-GEGKSKCFGFVNFENADDAARSVEA 267
Query: 514 LNFTFVNGKSIRI------------MHSHRDPSIRKSG----AANIFIKNLEKDIDNKTL 645
LN V+GK + + S + S++++ AN+++KNL+ ID+ L
Sbjct: 268 LNGKKVDGKEWYVGKAQKKSEREVELKSRFEQSVKEAADKYQGANLYVKNLDDSIDDDKL 327
Score = 43.9 bits (102), Expect = 0.008
Identities = 25/83 (30%), Positives = 47/83 (56%)
Frame = +1
Query: 319 QYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDAS 498
+Y +LYV +LD S+ + +L E+F+ G + S KV RD + S G +V +++ ++A+
Sbjct: 307 KYQGANLYVKNLDDSIDDDKLKELFTGFGTITSCKVMRD-PNGISRGSGFVAFSSPEEAA 365
Query: 499 HALELLNFTFVNGKSIRIMHSHR 567
AL +N + K + + + R
Sbjct: 366 RALAEMNGRMIVSKPLYVALAQR 388
>tr|P93616|P93616_WHEAT Poly(A)-binding protein OS=Triticum aestivum
GN=wheatpab PE=1 SV=1
Length = 651
Score = 159 bits (402), Expect = 1e-37
Identities = 75/110 (68%), Positives = 95/110 (86%)
Frame = +1
Query: 316 SQYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDA 495
S + +TSLYVGDLD SV +AQL+++F+Q+G VVS++VCRD+ S+KSLGYAYVNYN DA
Sbjct: 27 SSFPATSLYVGDLDVSVQDAQLFDVFAQIGGVVSVRVCRDVTSRKSLGYAYVNYNTPADA 86
Query: 496 SHALELLNFTFVNGKSIRIMHSHRDPSIRKSGAANIFIKNLEKDIDNKTL 645
+ ALE+LNFT +NG+ IRIM+S+RDPS+RKSG ANIFIKNL+K IDNK L
Sbjct: 87 ARALEMLNFTPINGRPIRIMYSNRDPSLRKSGTANIFIKNLDKSIDNKAL 136
Score = 51.2 bits (121), Expect = 5e-05
Identities = 28/83 (33%), Positives = 48/83 (57%)
Frame = +1
Query: 319 QYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDAS 498
+Y +T+LY+ +LD +V + +L E+F++ G + S KV RD + S G +V + + DAS
Sbjct: 310 KYQNTNLYLKNLDDTVDDEKLRELFAEFGTITSCKVMRD-SNGASRGSGFVAFKSADDAS 368
Query: 499 HALELLNFTFVNGKSIRIMHSHR 567
AL +N V K + + + R
Sbjct: 369 RALAEMNNKMVGNKPLYVALAQR 391
Score = 42.7 bits (99), Expect = 0.019
Identities = 33/128 (25%), Positives = 61/128 (47%), Gaps = 16/128 (12%)
Frame = +1
Query: 310 SPSQYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQ 489
SP ++YV +L + TE L EIF + G + S+ V RD +S + +VN+ +
Sbjct: 204 SPGNVKFNNVYVKNLAETTTEDDLKEIFGKFGAITSVVVMRD-GDGRSKCFGFVNFESPD 262
Query: 490 DASHALELLNFTFVNGKSIRI----MHSHRDPSIR------------KSGAANIFIKNLE 621
+A+ A++ LN + K + S R+ ++ K N+++KNL+
Sbjct: 263 EAALAVQDLNGKKFSDKEWYVGRAQKKSEREIELKEKFEKNLQEAADKYQNTNLYLKNLD 322
Query: 622 KDIDNKTL 645
+D++ L
Sbjct: 323 DTVDDEKL 330
>tr|A7PLE6|A7PLE6_VITVI Chromosome chr7 scaffold_20, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00019539001
PE=4 SV=1
Length = 654
Score = 159 bits (402), Expect = 1e-37
Identities = 75/113 (66%), Positives = 96/113 (84%)
Frame = +1
Query: 307 GSPSQYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNG 486
G +Q+VSTSLYVGDL+ +VT++ LY++F Q+G VVS++VCRDL +++SLGY YVNY N
Sbjct: 24 GGGNQFVSTSLYVGDLESNVTDSHLYDLFGQLGPVVSVRVCRDLSTRRSLGYGYVNYGNT 83
Query: 487 QDASHALELLNFTFVNGKSIRIMHSHRDPSIRKSGAANIFIKNLEKDIDNKTL 645
QDA+ AL++LNFT +NGK IRIM+S RDPSIR+SG ANIFIKNL+K IDNK L
Sbjct: 84 QDAARALDMLNFTPLNGKPIRIMYSFRDPSIRRSGTANIFIKNLDKAIDNKAL 136
Score = 47.0 bits (110), Expect = 0.001
Identities = 27/83 (32%), Positives = 47/83 (56%)
Frame = +1
Query: 319 QYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDAS 498
++ +LYV +LD S+ + +L E+FS+ G + S KV RD + S G +V ++ ++AS
Sbjct: 310 KFQGLNLYVKNLDDSIADDKLRELFSEFGTITSCKVMRD-PNGISRGSGFVAFSTAEEAS 368
Query: 499 HALELLNFTFVNGKSIRIMHSHR 567
AL +N V K + + + R
Sbjct: 369 RALADMNGKMVASKPLYVALAQR 391
>tr|A5BR81|A5BR81_VITVI Putative uncharacterized protein (Chromosome
chr3 scaffold_8, whole genome shotgun sequence) OS=Vitis
vinifera GN=GSVIVT00036627001 PE=4 SV=1
Length = 648
Score = 159 bits (401), Expect = 2e-37
Identities = 74/110 (67%), Positives = 97/110 (88%)
Frame = +1
Query: 316 SQYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDA 495
+Q+V+TSLYVGDL+ +V ++QLY++FSQ+G VVS++VCRDL +++SLGY YVNY+N QDA
Sbjct: 25 NQFVTTSLYVGDLELNVNDSQLYDLFSQMGAVVSVRVCRDLSTRRSLGYGYVNYSNPQDA 84
Query: 496 SHALELLNFTFVNGKSIRIMHSHRDPSIRKSGAANIFIKNLEKDIDNKTL 645
+ AL++LNFT +NGK IRIM+SHRDPSIRKSG NIFIKNL+K ID+K L
Sbjct: 85 ARALDVLNFTPLNGKPIRIMYSHRDPSIRKSGTGNIFIKNLDKGIDHKAL 134
Score = 52.4 bits (124), Expect = 2e-05
Identities = 28/108 (25%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Frame = +1
Query: 334 SLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDASHALEL 513
++++ +LD + L++ FS G ++S KV D S S G+ +V +++ + A A++
Sbjct: 119 NIFIKNLDKGIDHKALHDTFSAFGNILSCKVATDA-SGMSKGHGFVQFDSEEAAQKAIDK 177
Query: 514 LNFTFVNGKSIRI----MHSHRDPSIRKSGAANIFIKNLEKDIDNKTL 645
LN +N K + + R+ +I K N+F+KN+ + + + L
Sbjct: 178 LNGMLLNDKQVFVGPFVRKQERESTINKEKFNNVFVKNISEGMTEEDL 225
Score = 46.6 bits (109), Expect = 0.001
Identities = 26/83 (31%), Positives = 48/83 (57%)
Frame = +1
Query: 319 QYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDAS 498
++ +LY+ +LD S+ + +L E+F+Q G + S KV RD + S G +V +++ ++AS
Sbjct: 308 KFQGANLYIKNLDDSIGDDKLKELFAQFGTITSCKVMRD-PNGLSRGSGFVAFSSPEEAS 366
Query: 499 HALELLNFTFVNGKSIRIMHSHR 567
AL +N V K + + + R
Sbjct: 367 RALAEMNSKMVVSKPLYVALAQR 389
Score = 44.3 bits (103), Expect = 0.006
Identities = 31/120 (25%), Positives = 55/120 (45%), Gaps = 16/120 (13%)
Frame = +1
Query: 334 SLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDASHALEL 513
+++V ++ +TE L IF + G + S+ V RD KS + +VN+ N DA+ ++E
Sbjct: 210 NVFVKNISEGMTEEDLTRIFGEFGPITSVVVMRD-GDGKSKCFGFVNFENVDDAAMSVEA 268
Query: 514 LNFTFVNGKSIRI----------------MHSHRDPSIRKSGAANIFIKNLEKDIDNKTL 645
LN + K + + ++ K AN++IKNL+ I + L
Sbjct: 269 LNGQKFDDKEWYVGKAQKKSEREIELKSRFEQNMKEAVDKFQGANLYIKNLDDSIGDDKL 328
>tr|A5B5N0|A5B5N0_VITVI Putative uncharacterized protein (Chromosome
chr18 scaffold_1, whole genome shotgun sequence)
OS=Vitis vinifera GN=GSVIVT00014861001 PE=4 SV=1
Length = 640
Score = 159 bits (401), Expect = 2e-37
Identities = 74/106 (69%), Positives = 93/106 (87%)
Frame = +1
Query: 328 STSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDASHAL 507
+ SLYVGDLD ++T++QLY++F Q GQV+S++VCRDL +++SLGY YVNY+N QDA+ AL
Sbjct: 17 TASLYVGDLDVNITDSQLYDLFIQAGQVLSVRVCRDLSTRRSLGYGYVNYSNPQDAARAL 76
Query: 508 ELLNFTFVNGKSIRIMHSHRDPSIRKSGAANIFIKNLEKDIDNKTL 645
+LLNFT +NGK IRIM+SHRDPSIRKSG ANIFIKNL+K IDNK L
Sbjct: 77 DLLNFTPLNGKPIRIMYSHRDPSIRKSGTANIFIKNLDKSIDNKAL 122
Score = 59.7 bits (143), Expect = 1e-07
Identities = 31/112 (27%), Positives = 63/112 (56%), Gaps = 9/112 (8%)
Frame = +1
Query: 328 STSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDASHAL 507
+ ++++ +LD S+ L++ FS G ++S K+ D S +S GY +V ++N + A +A+
Sbjct: 105 TANIFIKNLDKSIDNKALHDTFSAFGNILSCKIATD-PSGQSKGYGFVQFDNEESAQNAI 163
Query: 508 ELLNFTFVNGKSIRI----MHSHRDPSIRKSGAANIFIKNL-----EKDIDN 636
+ LN +N K + + R+ ++ K+ N+++KNL E+D+ N
Sbjct: 164 DKLNGMLINDKQVYVGQFLRKQERETALNKTKFNNVYVKNLSESTTEEDLKN 215
Score = 47.4 bits (111), Expect = 8e-04
Identities = 27/83 (32%), Positives = 47/83 (56%)
Frame = +1
Query: 319 QYVSTSLYVGDLDPSVTEAQLYEIFSQVGQVVSIKVCRDLMSKKSLGYAYVNYNNGQDAS 498
++ +LY+ +LD S+ + +L E+FS+ G + S KV RD S S G +V ++ ++AS
Sbjct: 296 KFQGVNLYIKNLDDSIGDDKLKELFSEFGTITSCKVMRD-PSGISRGSGFVAFSTSEEAS 354
Query: 499 HALELLNFTFVNGKSIRIMHSHR 567
AL +N V K + + + R
Sbjct: 355 RALTEMNGKMVVSKPLYVALAQR 377
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