DK958340 |
Clone id |
TST39A01NGRL0030_L23 |
Library |
TST39 |
Length |
538 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0030_L23. 5' end sequence. |
Accession |
DK958340 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL57Contig1 |
Sequence |
CTCAGAGTTGCATGGATCCTAATGTGATGGAGTCTAAGGTGGTGGTGAGCTCGTGTGGCC ATGATGGTCCCTTTGGTGCTACCGGTGTGAAGAGATTGAAGAGTATTGGTATGATTGACA AGGTCCCTGGCATGAAGGCCCTAGACATGAATGCTGCGGAGGATGCAATTGTTAAGTTCA CACGTGAGGTGGTGCCTGGCATGATTGTAACGGGTATGGAAGTCGCTGAGATTGATGGCT CTCCTAGGATGGGACCTACTTTTGGAGCTATGATGGTGTCTGGACAGAAGGCAGCTCACC TTGCCCTGAAGGCTCTTGGGCTTCCCAATGCTCTGGATGGCTCCTACAAACTGGGCGGAG TGCATCCCGAAACTCTGGTGCTGGCATCTGCTGAGGACGAGACTGCCTCTGCGTAGCTTT GTTTTTTGATGATAAGGCTAGATTAGGAGCTGATTGGAACCGAAAAGAAGCGTCTTTATC TTTTGCTGTGTAAATGCTTTTCCTTTCAATAAATATGAGCTCTTAGGGTTTTTAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O23787 |
Definition |
sp|O23787|THI4_CITSI Thiazole biosynthetic enzyme, chloroplastic OS=Citrus sinensis |
Align length |
137 |
Score (bit) |
210.0 |
E-value |
3.0e-54 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK958340|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0030_L23, 5' (538 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|O23787|THI4_CITSI Thiazole biosynthetic enzyme, chloroplastic... 210 3e-54 sp|Q38709|THI4_ALNGL Thiazole biosynthetic enzyme, chloroplastic... 205 1e-52 sp|Q38814|THI4_ARATH Thiazole biosynthetic enzyme, chloroplastic... 197 2e-50 sp|Q41739|THI42_MAIZE Thiazole biosynthetic enzyme 1-2, chloropl... 190 4e-48 sp|Q41738|THI41_MAIZE Thiazole biosynthetic enzyme 1-1, chloropl... 186 8e-47 sp|P23617|THI4_FUSSH Thiazole biosynthetic enzyme, mitochondrial... 130 4e-30 sp|Q9UUZ9|THI4_ASPOR Thiazole biosynthetic enzyme, mitochondrial... 128 2e-29 sp|P23618|THI4_FUSOX Thiazole biosynthetic enzyme, mitochondrial... 128 2e-29 sp|P40998|THI2_SCHPO Thiazole biosynthetic enzyme, mitochondrial... 122 1e-27 sp|Q9UVF8|THI4_UROFA Thiazole biosynthetic enzyme, mitochondrial... 113 5e-25 sp|P32318|THI4_YEAST Thiazole biosynthetic enzyme, mitochondrial... 89 1e-17 sp|Q8U0Q5|THI4_PYRFU Putative thiazole biosynthetic enzyme OS=Py... 75 3e-13 sp|O59082|THI4_PYRHO Putative thiazole biosynthetic enzyme OS=Py... 74 4e-13 sp|A4WKY7|THI4_PYRAR Putative thiazole biosynthetic enzyme OS=Py... 74 4e-13 sp|Q9V0J8|THI4_PYRAB Putative thiazole biosynthetic enzyme OS=Py... 74 4e-13 sp|Q9Y9Z0|THI4_AERPE Putative thiazole biosynthetic enzyme OS=Ae... 74 4e-13 sp|Q18KP1|THI4_HALWD Putative thiazole biosynthetic enzyme OS=Ha... 73 8e-13 sp|Q4JAF8|THI4_SULAC Putative thiazole biosynthetic enzyme OS=Su... 71 3e-12 sp|Q97ZY5|THI4_SULSO Putative thiazole biosynthetic enzyme OS=Su... 71 4e-12 sp|Q5JD25|THI4_PYRKO Putative thiazole biosynthetic enzyme OS=Py... 71 4e-12 sp|Q975R0|THI4_SULTO Putative thiazole biosynthetic enzyme OS=Su... 70 5e-12 sp|A4YIV7|THI4_METS5 Putative thiazole biosynthetic enzyme OS=Me... 70 5e-12 sp|Q3V7Z9|THI4_HALMA Putative thiazole biosynthetic enzyme OS=Ha... 67 5e-11 sp|A1RW13|THI4_PYRIL Putative thiazole biosynthetic enzyme OS=Py... 66 1e-10 sp|Q3IMI0|THI4_NATPD Putative thiazole biosynthetic enzyme OS=Na... 64 6e-10 sp|A6UPZ7|THI4_METVS Putative thiazole biosynthetic enzyme OS=Me... 63 1e-09 sp|Q46AR1|THI4_METBF Putative thiazole biosynthetic enzyme OS=Me... 62 1e-09 sp|A0B880|THI4_METTP Putative thiazole biosynthetic enzyme OS=Me... 62 2e-09 sp|Q6LXJ8|THI4_METMP Putative thiazole biosynthetic enzyme OS=Me... 62 2e-09 sp|Q9WZP4|THI4_THEMA Putative thiazole biosynthetic enzyme OS=Th... 61 3e-09
>sp|O23787|THI4_CITSI Thiazole biosynthetic enzyme, chloroplastic OS=Citrus sinensis GN=THI1 PE=2 SV=1 Length = 356
Score = 210 bits (535), Expect = 3e-54 Identities = 105/137 (76%), Positives = 117/137 (85%) Frame = +3
Query: 3 QSCMDPNVMESKVVVSSCGHDGPFGATGVKRLKSIGMIDKVPGMKALDMNAAEDAIVKFT 182 QSCMDPNVME+KVVVSSCGHDGPFGATGVKRLKSIGMI++VPGMKALDMN+AEDAIV+ T Sbjct: 221 QSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLT 280
Query: 183 REVVPGMIVTGMEVAEIDGSPRMGPTFGAMMVSGQXXXXXXXXXXXXPNALDGSYKLGGV 362 REVVPGMIVTGMEVAEIDG+PRMGPTFGAMM+SGQ PNALDG+Y +GGV Sbjct: 281 REVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPNALDGTY-VGGV 339
Query: 363 HPETLVLASAEDETASA 413 HPE ++ A+ ETA A Sbjct: 340 HPELILAAADSAETADA 356
>sp|Q38709|THI4_ALNGL Thiazole biosynthetic enzyme, chloroplastic OS=Alnus glutinosa GN=THI4 PE=2 SV=1 Length = 352
Score = 205 bits (522), Expect = 1e-52 Identities = 102/137 (74%), Positives = 113/137 (82%) Frame = +3
Query: 3 QSCMDPNVMESKVVVSSCGHDGPFGATGVKRLKSIGMIDKVPGMKALDMNAAEDAIVKFT 182 QSCMDPNVME+KVVVSSCGHDGPFGATGVK L+SIGMID VPGMKALDMN AEDAIV+ T Sbjct: 217 QSCMDPNVMEAKVVVSSCGHDGPFGATGVKSLRSIGMIDTVPGMKALDMNVAEDAIVRLT 276
Query: 183 REVVPGMIVTGMEVAEIDGSPRMGPTFGAMMVSGQXXXXXXXXXXXXPNALDGSYKLGGV 362 RE+VPGMIVTGMEVAEIDG+PRMGPTFGAMM+SGQ PNALDGSY +GG+ Sbjct: 277 REIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGLPNALDGSY-VGGI 335
Query: 363 HPETLVLASAEDETASA 413 HPE ++ A+ E A A Sbjct: 336 HPELILAAADSAEIADA 352
>sp|Q38814|THI4_ARATH Thiazole biosynthetic enzyme, chloroplastic OS=Arabidopsis thaliana GN=THI1 PE=1 SV=1 Length = 349
Score = 197 bits (502), Expect = 2e-50 Identities = 99/137 (72%), Positives = 111/137 (81%) Frame = +3
Query: 3 QSCMDPNVMESKVVVSSCGHDGPFGATGVKRLKSIGMIDKVPGMKALDMNAAEDAIVKFT 182 QSCMDPNVME+K+VVSSCGHDGPFGATGVKRLKSIGMID VPGMKALDMN AEDAIV+ T Sbjct: 214 QSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDHVPGMKALDMNTAEDAIVRLT 273
Query: 183 REVVPGMIVTGMEVAEIDGSPRMGPTFGAMMVSGQXXXXXXXXXXXXPNALDGSYKLGGV 362 REVVPGMIVTGMEVAEIDG+PRMGPTFGAMM+SGQ PNA+DG+ +G + Sbjct: 274 REVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAGQLALKALGLPNAIDGTL-VGNL 332
Query: 363 HPETLVLASAEDETASA 413 PE ++ A+ ET A Sbjct: 333 SPELVLAAADSAETVDA 349
>sp|Q41739|THI42_MAIZE Thiazole biosynthetic enzyme 1-2, chloroplastic OS=Zea mays GN=THI1-2 PE=2 SV=1 Length = 354
Score = 190 bits (482), Expect = 4e-48 Identities = 97/138 (70%), Positives = 108/138 (78%), Gaps = 1/138 (0%) Frame = +3
Query: 3 QSCMDPNVMESKVVVSSCGHDGPFGATGVKRLKSIGMIDKVPGMKALDMNAAEDAIVKFT 182 QSCMDPNVME+KVVVSSCGHDGPFGATGVKRL+ IGMI VPGMKALDMNAAED IV+ T Sbjct: 217 QSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMISAVPGMKALDMNAAEDEIVRLT 276
Query: 183 REVVPGMIVTGMEVAEIDGSPRMGPTFGAMMVSGQXXXXXXXXXXXXPNALDGSY-KLGG 359 REVVPGMIVTGMEVAEIDG+PRMGPTFGAMM+SGQ PNA+DG+ ++ Sbjct: 277 REVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGRPNAVDGTIPEVSP 336
Query: 360 VHPETLVLASAEDETASA 413 E V+AS +DE A Sbjct: 337 ALREEFVIASKDDEVVDA 354
>sp|Q41738|THI41_MAIZE Thiazole biosynthetic enzyme 1-1, chloroplastic OS=Zea mays GN=THI1-1 PE=2 SV=1 Length = 354
Score = 186 bits (471), Expect = 8e-47 Identities = 95/137 (69%), Positives = 106/137 (77%) Frame = +3
Query: 3 QSCMDPNVMESKVVVSSCGHDGPFGATGVKRLKSIGMIDKVPGMKALDMNAAEDAIVKFT 182 QSCMDPNVME+KVVVSSCGHDGPFGATGVKRL+ IGMI VPGMKALDMN AED IV+ T Sbjct: 220 QSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMISAVPGMKALDMNTAEDEIVRLT 279
Query: 183 REVVPGMIVTGMEVAEIDGSPRMGPTFGAMMVSGQXXXXXXXXXXXXPNALDGSYKLGGV 362 REVVPGMIVTGMEVAEIDG+PRMGPTFGAMM+SGQ PNA+DG+ + Sbjct: 280 REVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGRPNAVDGT--MSPP 337
Query: 363 HPETLVLASAEDETASA 413 E L++A +DE A Sbjct: 338 LREELMIAYKDDEVVDA 354
>sp|P23617|THI4_FUSSH Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium solani subsp. phaseoli GN=STI35 PE=2 SV=1 Length = 324
Score = 130 bits (327), Expect = 4e-30 Identities = 61/94 (64%), Positives = 78/94 (82%) Frame = +3
Query: 3 QSCMDPNVMESKVVVSSCGHDGPFGATGVKRLKSIGMIDKVPGMKALDMNAAEDAIVKFT 182 QSCMDPN + + +V+S+ GHD P GA VKRL S+G I+K+ GM+ LDMN AEDAIVK T Sbjct: 211 QSCMDPNTINAPLVISTTGHDAPMGAFCVKRLVSMGRIEKLGGMRGLDMNVAEDAIVKGT 270
Query: 183 REVVPGMIVTGMEVAEIDGSPRMGPTFGAMMVSG 284 RE+VPG+IV GME++E+DG+ RMGPTFGAM++SG Sbjct: 271 REIVPGLIVGGMELSEVDGANRMGPTFGAMVLSG 304
>sp|Q9UUZ9|THI4_ASPOR Thiazole biosynthetic enzyme, mitochondrial OS=Aspergillus oryzae GN=thiA PE=3 SV=2 Length = 327
Score = 128 bits (322), Expect = 2e-29 Identities = 60/93 (64%), Positives = 76/93 (81%) Frame = +3
Query: 6 SCMDPNVMESKVVVSSCGHDGPFGATGVKRLKSIGMIDKVPGMKALDMNAAEDAIVKFTR 185 SCMDPN + + V++S+ GHDGPFGA KRL S+G +DK+ GM+ LDMN+AEDAIVK TR Sbjct: 215 SCMDPNTINAPVIISTTGHDGPFGAFCAKRLVSMGSVDKLGGMRGLDMNSAEDAIVKNTR 274
Query: 186 EVVPGMIVTGMEVAEIDGSPRMGPTFGAMMVSG 284 EV G+I+ GME++EIDG RMGPTFGAM++SG Sbjct: 275 EVTKGLIIGGMELSEIDGFNRMGPTFGAMVLSG 307
>sp|P23618|THI4_FUSOX Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium oxysporum GN=STI35 PE=2 SV=2 Length = 320
Score = 128 bits (321), Expect = 2e-29 Identities = 60/94 (63%), Positives = 77/94 (81%) Frame = +3
Query: 3 QSCMDPNVMESKVVVSSCGHDGPFGATGVKRLKSIGMIDKVPGMKALDMNAAEDAIVKFT 182 QSCMDPN + + +++S+ GHDGP GA VKRL S+ I+K+ GM+ LDMN AEDAIVK T Sbjct: 207 QSCMDPNTINAPLIISTTGHDGPMGAFCVKRLVSMQRIEKLGGMRGLDMNLAEDAIVKGT 266
Query: 183 REVVPGMIVTGMEVAEIDGSPRMGPTFGAMMVSG 284 RE+VPG+IV GME++E+DG+ RMGPTFGAM +SG Sbjct: 267 REIVPGLIVGGMELSEVDGANRMGPTFGAMALSG 300
>sp|P40998|THI2_SCHPO Thiazole biosynthetic enzyme, mitochondrial OS=Schizosaccharomyces pombe GN=thi2 PE=2 SV=2 Length = 328
Score = 122 bits (306), Expect = 1e-27 Identities = 60/94 (63%), Positives = 71/94 (75%) Frame = +3
Query: 3 QSCMDPNVMESKVVVSSCGHDGPFGATGVKRLKSIGMIDKVPGMKALDMNAAEDAIVKFT 182 QSCMDPN + + +VVS+ GHDGPFGA VKRL S ++ + M+ LDMN AED IVK T Sbjct: 213 QSCMDPNTINAHLVVSATGHDGPFGAFCVKRLASAQLVSNLHDMRPLDMNRAEDLIVKGT 272
Query: 183 REVVPGMIVTGMEVAEIDGSPRMGPTFGAMMVSG 284 REV PGMIV GME++E DG+ RMGPTFG MM SG Sbjct: 273 REVFPGMIVGGMELSEFDGANRMGPTFGGMMFSG 306
>sp|Q9UVF8|THI4_UROFA Thiazole biosynthetic enzyme, mitochondrial OS=Uromyces fabae GN=THI2 PE=3 SV=1 Length = 338
Score = 113 bits (283), Expect = 5e-25 Identities = 54/95 (56%), Positives = 71/95 (74%) Frame = +3
Query: 3 QSCMDPNVMESKVVVSSCGHDGPFGATGVKRLKSIGMIDKVPGMKALDMNAAEDAIVKFT 182 QSCMDP+ + + +V S GHDGPFGA VKR+ S G+ + + M+ LDM AED I T Sbjct: 219 QSCMDPSTITAPLVCSFAGHDGPFGAFCVKRVASAGLSEGLGDMRPLDMERAEDHIANKT 278
Query: 183 REVVPGMIVTGMEVAEIDGSPRMGPTFGAMMVSGQ 287 RE++PG+IV GME++E DGS RMGPTFGAM++SG+ Sbjct: 279 REILPGLIVGGMELSEFDGSARMGPTFGAMLLSGK 313
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SMC8 |
Definition |
tr|A9SMC8|A9SMC8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
137 |
Score (bit) |
214.0 |
E-value |
3.0e-54 |
Report |
|