DK958348 |
Clone id |
TST39A01NGRL0030_M07 |
Library |
TST39 |
Length |
644 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0030_M07. 5' end sequence. |
Accession |
DK958348 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL944Contig1 |
Sequence |
GTGCGCGTGCGCCTTCGCAGCAGCGCGCAAAACGCAGCTATGGCGGCAGCAGCAGCAATG AGGAATGGCGCGGCCATGGGTCTCTCTACGCCCATCCCCACCTCCAAGCGTGGCCTCTGC TCATCCTTCTTACCGCCTCTGCAGCCTCGCAGCAGATGCCTTGGCATGGCTCCAGGTCTC TCGTTGCCTGCACGCCTGGGCTTGGCCCCATCGCCTCACCGCCCCCTCCACATTTCTGCT TCTGCTGCCGCTCAAACTGCCTCGGCCCCAGCTGAGCCCCCCAAGGCTACCCCCAGCAAT ATTTGGCTCTCCAACGTTACCCCCATTTGGAAGAAACCCTATTTCTTGAACAGGACCTGG TCAGCCAGTGACATTGGAATTGGGATCTATTTGCTACTCACTCATCTGGGCTGCCTCCTT GCCCCCTTCACGTTCACCTGGAAGGCTTTTGGGGTGTTTCTTGGCATGTATGTAATTACG GGTATGCTCGGAATCACCCTATCGTTTCACAGAAACCTCTCCCACAAGAGCTTCACCCTT CCTAAGTGGTTGGAGTATACATTTGCATACTGTGGCGTCCTGGCTCTTCAGGGGGATCCT TTGGAATGGGTGAGCTCACATCGATACCATCATCAACACTGTGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q949X0 |
Definition |
sp|Q949X0|ADS3_ARATH Palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic OS=Arabidopsis thaliana |
Align length |
104 |
Score (bit) |
146.0 |
E-value |
1.0e-34 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SDT2 |
Definition |
tr|A9SDT2|A9SDT2_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens |
Align length |
115 |
Score (bit) |
168.0 |
E-value |
2.0e-40 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK958348|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0030_M07, 5' (644 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SDT2|A9SDT2_PHYPA Predicted protein (Fragment) OS=Physcomit... 168 2e-40 tr|Q8S4Q3|Q8S4Q3_PICGL Desaturase delta 9 OS=Picea glauca GN=Des... 161 3e-38 tr|A9NXX9|A9NXX9_PICSI Putative uncharacterized protein OS=Picea... 161 3e-38 tr|A4S9D8|A4S9D8_OSTLU Predicted protein OS=Ostreococcus lucimar... 157 7e-37 tr|A9U463|A9U463_PHYPA Predicted protein OS=Physcomitrella paten... 149 2e-34 tr|A8J015|A8J015_CHLRE MGDG specific palmitate delta-7 desaturas... 140 5e-32 tr|A7QIM3|A7QIM3_VITVI Chromosome chr9 scaffold_104, whole genom... 140 5e-32 tr|B4X949|B4X949_DESSO Delta-9 fatty acid desaturase OS=Descurai... 133 8e-30 tr|Q7DN88|Q7DN88_ROSHC Delta-9 desaturase OS=Rosa hybrid cultiva... 124 6e-27 tr|O04700|O04700_ROSHC Senescence-inducible gene protein (Fragme... 124 6e-27 tr|Q9FV68|Q9FV68_LIMDO Delta5 acyl-CoA desaturase (Fragment) OS=... 115 2e-24 tr|A8JEN2|A8JEN2_CHLRE Fatty acid desaturase OS=Chlamydomonas re... 113 9e-24 tr|Q44117|Q44117_SYNP6 Delta-9 acyl-lipid desaturase OS=Synechoc... 107 8e-22 tr|Q31K28|Q31K28_SYNE7 Delta-9 acyl-phospholipid desaturase OS=S... 107 8e-22 tr|B1XIS7|B1XIS7_SYNP2 Delta-9 acyl-lipid desaturase OS=Synechoc... 107 8e-22 tr|O07873|O07873_SYNP2 Delta-9 desaturase OS=Synechococcus sp. (... 107 8e-22 tr|A0ZMU4|A0ZMU4_NODSP Delta-9 desaturase OS=Nodularia spumigena... 106 1e-21 tr|Q44502|Q44502_ANASP Delta-9 desaturase OS=Anabaena sp. (strai... 103 9e-21 tr|Q79F73|Q79F73_ANAVA Fatty-acid desaturase OS=Anabaena variabi... 103 9e-21 tr|B7JXH1|B7JXH1_SYNP8 Stearoyl-CoA 9-desaturase OS=Synechococcu... 103 9e-21 tr|B4BVL8|B4BVL8_9CHRO Stearoyl-CoA 9-desaturase OS=Cyanothece s... 103 9e-21 tr|Q3M5C5|Q3M5C5_ANAVT Delta-9 acyl-phospholipid desaturase OS=A... 103 1e-20 tr|A8JEP6|A8JEP6_CHLRE Fatty acid desaturase-like protein OS=Chl... 101 4e-20 tr|Q4BXX0|Q4BXX0_CROWT Stearoyl-CoA 9-desaturase OS=Crocosphaera... 100 8e-20 tr|B7KIY1|B7KIY1_9CHRO Stearoyl-CoA 9-desaturase OS=Cyanothece s... 100 8e-20 tr|A0Z057|A0Z057_9CYAN Delta-9 desaturase OS=Lyngbya sp. PCC 810... 100 8e-20 tr|O33722|O33722_SPIPL Delta-9 desaturase OS=Spirulina platensis... 100 1e-19 tr|B5W728|B5W728_SPIMA Stearoyl-CoA 9-desaturase OS=Arthrospira ... 100 1e-19 tr|B2M1X7|B2M1X7_SPIPL Delta 9 desaturase OS=Arthrospira platens... 100 1e-19 tr|Q55406|Q55406_SYNY3 Acyl-CoA desaturase 1 OS=Synechocystis sp... 99 2e-19
>tr|A9SDT2|A9SDT2_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_15475 PE=3 SV=1 Length = 292
Score = 168 bits (426), Expect = 2e-40 Identities = 75/115 (65%), Positives = 92/115 (80%), Gaps = 1/115 (0%) Frame = +1
Query: 301 IWLSNVTPIWKKPYFLNRTWSASDIGIGIYLLLTHLGCLLAPFTFTWKAFGVFLGMYVIT 480 IWLS+V ++ YF NR W++ D+ +++ H CL AP TF+W+A GVF+G+YVIT Sbjct: 2 IWLSDVVVKRRRNYFKNRQWTSKDLTYAGFMIFMHGLCLFAPATFSWEAVGVFMGLYVIT 61
Query: 481 GMLGITLSFHRNLSHKSFTLPKWLEYTFAYCGVLAL-QGDPLEWVSSHRYHHQHC 642 GMLGITLS+HRNLSHKSF +PKWLEYTFAYCGV A+ QGDP EWVS+HRYHHQHC Sbjct: 62 GMLGITLSYHRNLSHKSFKVPKWLEYTFAYCGVQAVQQGDPTEWVSAHRYHHQHC 116
>tr|Q8S4Q3|Q8S4Q3_PICGL Desaturase delta 9 OS=Picea glauca GN=Des9 PE=2 SV=1 Length = 382
Score = 161 bits (408), Expect = 3e-38 Identities = 72/105 (68%), Positives = 85/105 (80%), Gaps = 1/105 (0%) Frame = +1
Query: 331 KKPYFLN-RTWSASDIGIGIYLLLTHLGCLLAPFTFTWKAFGVFLGMYVITGMLGITLSF 507 +KP+ L R WS DIG + H CLLAPFTFTWKAFGVF +YV+TG+LGITLS+ Sbjct: 98 RKPFLLELREWSLGDIGAAGTVFGMHALCLLAPFTFTWKAFGVFAVLYVVTGLLGITLSY 157
Query: 508 HRNLSHKSFTLPKWLEYTFAYCGVLALQGDPLEWVSSHRYHHQHC 642 HRNLSH+SF LPKWLEY FAYCGV A+QGDPL+WVS+HRYHH++C Sbjct: 158 HRNLSHRSFRLPKWLEYLFAYCGVQAVQGDPLDWVSTHRYHHEYC 202
>tr|A9NXX9|A9NXX9_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 383
Score = 161 bits (408), Expect = 3e-38 Identities = 72/105 (68%), Positives = 85/105 (80%), Gaps = 1/105 (0%) Frame = +1
Query: 331 KKPYFLN-RTWSASDIGIGIYLLLTHLGCLLAPFTFTWKAFGVFLGMYVITGMLGITLSF 507 +KP+ L R WS DIG + H CLLAPFTFTWKAFGVF +YV+TG+LGITLS+ Sbjct: 99 RKPFLLELREWSLGDIGAAGTVFGMHALCLLAPFTFTWKAFGVFAVLYVVTGLLGITLSY 158
Query: 508 HRNLSHKSFTLPKWLEYTFAYCGVLALQGDPLEWVSSHRYHHQHC 642 HRNLSH+SF LPKWLEY FAYCGV A+QGDPL+WVS+HRYHH++C Sbjct: 159 HRNLSHRSFRLPKWLEYLFAYCGVQAVQGDPLDWVSTHRYHHEYC 203
>tr|A4S9D8|A4S9D8_OSTLU Predicted protein OS=Ostreococcus lucimarinus (strain CCE9901) GN=OSTLU_51664 PE=3 SV=1 Length = 358
Score = 157 bits (396), Expect = 7e-37 Identities = 72/114 (63%), Positives = 85/114 (74%) Frame = +1
Query: 301 IWLSNVTPIWKKPYFLNRTWSASDIGIGIYLLLTHLGCLLAPFTFTWKAFGVFLGMYVIT 480 ++LS++ K+ FL R W +DI ++ + HLGCLLAPFTFTW AF FL MY IT Sbjct: 65 VFLSDILASPKRNAFL-RKWIPTDITYVSFIGVMHLGCLLAPFTFTWGAFKCFLAMYFIT 123
Query: 481 GMLGITLSFHRNLSHKSFTLPKWLEYTFAYCGVLALQGDPLEWVSSHRYHHQHC 642 G LGITLS+HR ++HKSF PKWLEY AYCG LA+QGDPLEW SSHRYHHQHC Sbjct: 124 GCLGITLSYHRQIAHKSFRTPKWLEYALAYCGALAMQGDPLEWASSHRYHHQHC 177
>tr|A9U463|A9U463_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_61927 PE=3 SV=1 Length = 257
Score = 149 bits (375), Expect = 2e-34 Identities = 65/77 (84%), Positives = 70/77 (90%) Frame = +1
Query: 412 CLLAPFTFTWKAFGVFLGMYVITGMLGITLSFHRNLSHKSFTLPKWLEYTFAYCGVLALQ 591 CLLAP TF+W A GV LG+YVITG+ GITLSFHRNLSHKSF LPKWLEY+FAYCGV A+Q Sbjct: 5 CLLAPATFSWDALGVSLGLYVITGLFGITLSFHRNLSHKSFKLPKWLEYSFAYCGVQAVQ 64
Query: 592 GDPLEWVSSHRYHHQHC 642 GDPLEWVSSHRYHHQHC Sbjct: 65 GDPLEWVSSHRYHHQHC 81
>tr|A8J015|A8J015_CHLRE MGDG specific palmitate delta-7 desaturase OS=Chlamydomonas reinhardtii GN=FAD5A PE=3 SV=1 Length = 306
Score = 140 bits (354), Expect = 5e-32 Identities = 65/113 (57%), Positives = 82/113 (72%) Frame = +1
Query: 301 IWLSNVTPIWKKPYFLNRTWSASDIGIGIYLLLTHLGCLLAPFTFTWKAFGVFLGMYVIT 480 ++LS+V K+P FLNR W+++D ++ HL APFT++ + +FL Y +T Sbjct: 9 VFLSDVATKGKRPSFLNRDWNSTDKAFLAFIGGMHLLACCAPFTYSPQMVALFLASYFVT 68
Query: 481 GMLGITLSFHRNLSHKSFTLPKWLEYTFAYCGVLALQGDPLEWVSSHRYHHQH 639 G LGITLS+HR LSHKSFT+PKWLEY AYCGVLA+QGDPLEW SSHRYHH H Sbjct: 69 GCLGITLSYHRMLSHKSFTVPKWLEYILAYCGVLAVQGDPLEWSSSHRYHHLH 121
>tr|A7QIM3|A7QIM3_VITVI Chromosome chr9 scaffold_104, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00000320001 PE=3 SV=1 Length = 382
Score = 140 bits (354), Expect = 5e-32 Identities = 59/97 (60%), Positives = 74/97 (76%) Frame = +1
Query: 352 RTWSASDIGIGIYLLLTHLGCLLAPFTFTWKAFGVFLGMYVITGMLGITLSFHRNLSHKS 531 R W++ D+G +L H + APF F W AF + + +Y +TG+LGITLS+HRNLSHKS Sbjct: 103 RKWNSLDVGTAGVILAMHFLSVFAPFVFNWSAFWLAMALYAVTGLLGITLSYHRNLSHKS 162
Query: 532 FTLPKWLEYTFAYCGVLALQGDPLEWVSSHRYHHQHC 642 F LPKWLEY+FAYCGV ALQG+P +WVS+HRYHHQ C Sbjct: 163 FKLPKWLEYSFAYCGVQALQGNPTDWVSTHRYHHQFC 199
>tr|B4X949|B4X949_DESSO Delta-9 fatty acid desaturase OS=Descurainia sophia PE=2 SV=1 Length = 377
Score = 133 bits (335), Expect = 8e-30 Identities = 64/112 (57%), Positives = 79/112 (70%) Frame = +1
Query: 307 LSNVTPIWKKPYFLNRTWSASDIGIGIYLLLTHLGCLLAPFTFTWKAFGVFLGMYVITGM 486 LS V + KK F R W+ D+ + ++ HL L APF F W AF VFL + +I G+ Sbjct: 87 LSEVVVVGKKRAFWERNWNYWDMTKLVIIVGLHLLSLSAPFYFNWTAFRVFLSLAIINGI 146
Query: 487 LGITLSFHRNLSHKSFTLPKWLEYTFAYCGVLALQGDPLEWVSSHRYHHQHC 642 ITLS+HRNLSH+SF LPKWLEY FAY GVLA +GDP+EWVS+HRYHH+HC Sbjct: 147 C-ITLSYHRNLSHRSFDLPKWLEYLFAYGGVLAFEGDPVEWVSNHRYHHKHC 197
>tr|Q7DN88|Q7DN88_ROSHC Delta-9 desaturase OS=Rosa hybrid cultivar PE=2 SV=1 Length = 297
Score = 124 bits (310), Expect = 6e-27 Identities = 58/102 (56%), Positives = 73/102 (71%), Gaps = 4/102 (3%) Frame = +1
Query: 343 FLNRTWSASDIGIGIYLLLTHLG----CLLAPFTFTWKAFGVFLGMYVITGMLGITLSFH 510 F R W D+ Y L LG CLLAPF FTW A V + +Y+++GM G+T+S+H Sbjct: 12 FFGREWDFMDL----YHLTLFLGVPFVCLLAPFQFTWGALWVAISLYLVSGM-GVTISYH 66
Query: 511 RNLSHKSFTLPKWLEYTFAYCGVLALQGDPLEWVSSHRYHHQ 636 RNL+H+SF +PKWLEY+ AYC VL+LQG PLEWVS+HRYHHQ Sbjct: 67 RNLAHQSFKVPKWLEYSLAYCAVLSLQGSPLEWVSTHRYHHQ 108
>tr|O04700|O04700_ROSHC Senescence-inducible gene protein (Fragment) OS=Rosa hybrid cultivar GN=senescence-inducible gene PE=2 SV=1 Length = 303
Score = 124 bits (310), Expect = 6e-27 Identities = 58/102 (56%), Positives = 73/102 (71%), Gaps = 4/102 (3%) Frame = +1
Query: 343 FLNRTWSASDIGIGIYLLLTHLG----CLLAPFTFTWKAFGVFLGMYVITGMLGITLSFH 510 F R W D+ Y L LG CLLAPF FTW A V + +Y+++GM G+T+S+H Sbjct: 18 FFGREWDFMDL----YHLTLFLGVPFVCLLAPFQFTWGALWVAISLYLVSGM-GVTISYH 72
Query: 511 RNLSHKSFTLPKWLEYTFAYCGVLALQGDPLEWVSSHRYHHQ 636 RNL+H+SF +PKWLEY+ AYC VL+LQG PLEWVS+HRYHHQ Sbjct: 73 RNLAHQSFKVPKWLEYSLAYCAVLSLQGSPLEWVSTHRYHHQ 114
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