DK958369 |
Clone id |
TST39A01NGRL0030_N05 |
Library |
TST39 |
Length |
650 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0030_N05. 5' end sequence. |
Accession |
DK958369 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL3084Contig1 |
Sequence |
GAGAAGAATGACACCTTGAGAGAGCTGCGGACTCTGTGGCTTGCTTCAATGGAGCCCCTC CCCTGTCTTTCTCCCACCTTTACCCCATTCCGGTGGTCCCCTGCAACAAAGCTTCAACAC ATGACCCCAAGTGTTGTATGCGTTCGTCCTCATCGAACATCTGTTGCCCTCTCTGCAACA TTGGATCGGGATCTTCGTGATGTACTAGAGCTAGCAAGTGATGCTGAGCTTCATGACTTG GCCAACATACTGTATGGTCAAAGCTTGTTAAGTCCTTTGCTGAAGTCCGTAACAAGAGGA GACGGGTCTCACAAAAAGTTTGATCAGGAAACAGAAGAGAGAGAAGCCTTGGTGGAGCGT TTGGAATCAAGATTTTTGTATTTGGGTGCAGATGCAAAGGAGACGCTAAGAGGTTGGAGA CCAACATACCGTGCCATATTACTGGGTGTTCGCGCAAAATTAAATGTCCATTGCTCAGCG AAGCTTTCCACTGAGGATTTAGAAGCTGAAATTTTCTTACATCTTCTTCAACAAAATACT AGGGAACGGACCAACATTTCTTTGCAGTCTCCTTGGAAGCATCAGCTTGCAGGTAGTGCA GAAAGAGTGAACCATATGGATCAGTACTCAAAAAATTTGCATGTTGCTCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P75617 |
Definition |
sp|P75617|YAAW_ECOLI UPF0174 protein yaaW OS=Escherichia coli (strain K12) |
Align length |
148 |
Score (bit) |
42.0 |
E-value |
0.003 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7QSV7 |
Definition |
tr|A7QSV7|A7QSV7_VITVI Chromosome undetermined scaffold_163, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
145 |
Score (bit) |
151.0 |
E-value |
3.0e-35 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK958369|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0030_N05, 5' (650 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7QSV7|A7QSV7_VITVI Chromosome undetermined scaffold_163, who... 151 3e-35 tr|A9NKP6|A9NKP6_PICSI Putative uncharacterized protein OS=Picea... 149 1e-34 tr|Q8LAD8|Q8LAD8_ARATH Putative uncharacterized protein (At1g734... 137 4e-31 tr|Q84WR4|Q84WR4_ARATH Putative uncharacterized protein At1g7347... 137 4e-31 tr|Q9FX40|Q9FX40_ARATH Putative uncharacterized protein T9L24.34... 122 1e-26 tr|A3BZE5|A3BZE5_ORYSJ Putative uncharacterized protein OS=Oryza... 117 5e-25 tr|B8BCI3|B8BCI3_ORYSI Putative uncharacterized protein OS=Oryza... 117 6e-25 tr|B2GVN0|B2GVN0_ARATH At1g73470 OS=Arabidopsis thaliana PE=2 SV=1 97 1e-18 tr|Q3M732|Q3M732_ANAVT Putative uncharacterized protein OS=Anaba... 71 7e-11 tr|Q10W25|Q10W25_TRIEI Putative uncharacterized protein OS=Trich... 70 8e-11 tr|A0ZGS3|A0ZGS3_NODSP Putative uncharacterized protein (Fragmen... 70 8e-11 tr|B2J246|B2J246_NOSP7 Putative uncharacterized protein OS=Nosto... 67 7e-10 tr|B5W5V3|B5W5V3_SPIMA Putative uncharacterized protein OS=Arthr... 67 7e-10 tr|B4VIS4|B4VIS4_9CYAN Putative uncharacterized protein OS=Micro... 66 2e-09 tr|B8HN34|B8HN34_9CHRO Putative uncharacterized protein OS=Cyano... 65 3e-09 tr|A0YK70|A0YK70_9CYAN Putative uncharacterized protein OS=Lyngb... 65 5e-09 tr|B0C4B0|B0C4B0_ACAM1 Putative uncharacterized protein OS=Acary... 62 4e-08 tr|B1XLT1|B1XLT1_SYNP2 Putative uncharacterized protein OS=Synec... 61 5e-08 tr|B7K3K7|B7K3K7_SYNP8 Putative uncharacterized protein OS=Synec... 60 1e-07 tr|B4C1I2|B4C1I2_9CHRO Putative uncharacterized protein OS=Cyano... 60 1e-07 tr|A8YHW9|A8YHW9_MICAE Genome sequencing data, contig C315 OS=Mi... 58 6e-07 tr|Q8DIH4|Q8DIH4_THEEB Tll1614 protein OS=Thermosynechococcus el... 56 2e-06 tr|B4B449|B4B449_9CHRO Putative uncharacterized protein OS=Cyano... 55 3e-06 tr|B4WJF9|B4WJF9_9SYNE Putative uncharacterized protein OS=Synec... 55 4e-06 tr|P72875|P72875_SYNY3 Slr0975 protein OS=Synechocystis sp. (str... 53 1e-05 tr|B7KG27|B7KG27_9CHRO Putative uncharacterized protein OS=Cyano... 53 1e-05 tr|B1WSS2|B1WSS2_CYAA5 Putative uncharacterized protein OS=Cyano... 51 7e-05 tr|A3IPC6|A3IPC6_9CHRO Putative uncharacterized protein OS=Cyano... 51 7e-05 tr|Q4BWV6|Q4BWV6_CROWT Similar to Uncharacterized protein conser... 49 2e-04 tr|Q8XGV3|Q8XGV3_SALTI Putative uncharacterized protein (Putativ... 47 0.001
>tr|A7QSV7|A7QSV7_VITVI Chromosome undetermined scaffold_163, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00006040001 PE=4 SV=1 Length = 312
Score = 151 bits (382), Expect = 3e-35 Identities = 79/145 (54%), Positives = 103/145 (71%), Gaps = 1/145 (0%) Frame = +1
Query: 169 LSATLDRDLRDVLELASDAELHDLANILYGQSLLSPLLKSVTR-GDGSHKKFDQETEERE 345 L D +LR VLELA+D+EL +L IL+G S SPLLKS++R D + +++ EERE Sbjct: 8 LICAFDPELRPVLELATDSELFELERILFGPSYFSPLLKSISRRADVDYAMIEEDLEERE 67
Query: 346 ALVERLESRFLYLGADAKETLRGWRPTYRAILLGVRAKLNVHCSAKLSTEDLEAEIFLHL 525 + LESRFL+L ADA+ TLRGWRP+YR +LLGVR KLNV CS+KLSTEDLE EIFLHL Sbjct: 68 DFISSLESRFLFLAADARSTLRGWRPSYRNVLLGVRKKLNVPCSSKLSTEDLEVEIFLHL 127
Query: 526 LQQNTRERTNISLQSPWKHQLAGSA 600 LQ + E + +L W++ A ++ Sbjct: 128 LQDYSSEESG-ALSKSWENSKASTS 151
>tr|A9NKP6|A9NKP6_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 383
Score = 149 bits (377), Expect = 1e-34 Identities = 82/123 (66%), Positives = 97/123 (78%), Gaps = 2/123 (1%) Frame = +1
Query: 169 LSATLDRDLRDVLELASDAELHDLANILYGQSLLSPLLKSVTRGDGSHKKFDQ--ETEER 342 +++ DR+LR VLELASDAEL +L +ILYG+S+LSPLLKSVT DG Q + E R Sbjct: 73 ITSVKDRELRMVLELASDAELCELCDILYGRSILSPLLKSVTYRDGPQDILVQLDDQEAR 132
Query: 343 EALVERLESRFLYLGADAKETLRGWRPTYRAILLGVRAKLNVHCSAKLSTEDLEAEIFLH 522 EAL+ERLESRFL+L ADA+ TL G RP+Y +LL VR KLNV CSAKLSTED+EAEIFLH Sbjct: 133 EALIERLESRFLFLAADARATLSGRRPSYHKVLLQVRKKLNVPCSAKLSTEDMEAEIFLH 192
Query: 523 LLQ 531 LLQ Sbjct: 193 LLQ 195
>tr|Q8LAD8|Q8LAD8_ARATH Putative uncharacterized protein (At1g73470) OS=Arabidopsis thaliana PE=2 SV=1 Length = 351
Score = 137 bits (346), Expect = 4e-31 Identities = 72/144 (50%), Positives = 97/144 (67%), Gaps = 1/144 (0%) Frame = +1
Query: 175 ATLDRDLRDVLELASDAELHDLANILYGQSLLSPLLKSV-TRGDGSHKKFDQETEEREAL 351 AT D +LR V ELA+D+EL++L IL+G S SPLLKS+ +G G Q+ E R+ Sbjct: 56 ATYDPELRLVFELATDSELYELEKILFGPSYFSPLLKSIPNKGGGDRLMIGQDIEVRDGF 115
Query: 352 VERLESRFLYLGADAKETLRGWRPTYRAILLGVRAKLNVHCSAKLSTEDLEAEIFLHLLQ 531 +E LESRFL+L ADA+ TLRGWRP+YR +LL VR LN+ CS++L TEDLEAEIFL+L+ Sbjct: 116 IEALESRFLFLAADARSTLRGWRPSYRNVLLAVRNNLNIPCSSQLPTEDLEAEIFLYLVD 175
Query: 532 QNTRERTNISLQSPWKHQLAGSAE 603 + E + + W++ AE Sbjct: 176 NFSSEASGV-FPGMWENSEVSEAE 198
>tr|Q84WR4|Q84WR4_ARATH Putative uncharacterized protein At1g73470 (Fragment) OS=Arabidopsis thaliana GN=At1g73470 PE=2 SV=1 Length = 350
Score = 137 bits (346), Expect = 4e-31 Identities = 72/144 (50%), Positives = 97/144 (67%), Gaps = 1/144 (0%) Frame = +1
Query: 175 ATLDRDLRDVLELASDAELHDLANILYGQSLLSPLLKSV-TRGDGSHKKFDQETEEREAL 351 AT D +LR V ELA+D+EL++L IL+G S SPLLKS+ +G G Q+ E R+ Sbjct: 55 ATYDPELRLVFELATDSELYELEKILFGPSYFSPLLKSIPNKGGGDRLMIGQDIEVRDGF 114
Query: 352 VERLESRFLYLGADAKETLRGWRPTYRAILLGVRAKLNVHCSAKLSTEDLEAEIFLHLLQ 531 +E LESRFL+L ADA+ TLRGWRP+YR +LL VR LN+ CS++L TEDLEAEIFL+L+ Sbjct: 115 IEALESRFLFLAADARSTLRGWRPSYRNVLLAVRNNLNIPCSSQLPTEDLEAEIFLYLVD 174
Query: 532 QNTRERTNISLQSPWKHQLAGSAE 603 + E + + W++ AE Sbjct: 175 NFSSEASGV-FPGMWENSEVSEAE 197
>tr|Q9FX40|Q9FX40_ARATH Putative uncharacterized protein T9L24.34 OS=Arabidopsis thaliana GN=T9L24.34 PE=4 SV=1 Length = 351
Score = 122 bits (307), Expect = 1e-26 Identities = 71/146 (48%), Positives = 94/146 (64%), Gaps = 3/146 (2%) Frame = +1
Query: 175 ATLDRDLRDVLELASDAELHDLANILYGQSLLSPLLKSV-TRGDGSHKKFDQETEEREAL 351 AT D +LR V ELA+D+EL++L IL+G S SPLLKS+ +G G Q+ E R+ Sbjct: 56 ATYDPELRLVFELATDSELYELEKILFGPSYFSPLLKSIPNKGGGDRLMIGQDIEVRDGF 115
Query: 352 VERLESRFLYLGADAKETLRGWRPTYRAILLGVRAKLNVHCSAKLSTEDLEAEIFLHLLQ 531 +E LESRFL+L ADA+ TLR P+YR +LL VR LN+ CS++L TEDLEAEIFL+L+ Sbjct: 116 IEALESRFLFLAADARSTLR---PSYRNVLLAVRNNLNIPCSSQLPTEDLEAEIFLYLVD 172
Query: 532 QNTRERTNISLQSP--WKHQLAGSAE 603 +R S P W++ AE Sbjct: 173 NFSRYSGEASGVFPGMWENSEVSEAE 198
>tr|A3BZE5|A3BZE5_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_028417 PE=4 SV=1 Length = 387
Score = 117 bits (294), Expect = 5e-25 Identities = 90/221 (40%), Positives = 114/221 (51%), Gaps = 40/221 (18%) Frame = +1
Query: 43 ASMEPLPCLSPTFTPF--------RWSPA----TKLQHMTPSVVCVRP---HRTSVALSA 177 AS PLP LSP P R +PA T + V +RP R S + SA Sbjct: 20 ASRSPLP-LSPAARPAPASSRFGDRRAPAVVAATARRRGAHGVRALRPLLLPRASASPSA 78
Query: 178 TL------DRDLRDVLELASDAELHDLANILYG------------------QSLLSPLLK 285 D +LR VLELA+D EL + ILYG +S SPLLK Sbjct: 79 KTAAGGMSDPELRMVLELATDEELMEFEEILYGTSYEPQMAKPKPANLSKIKSYFSPLLK 138
Query: 286 SVT-RGDGSHKKFDQETEEREALVERLESRFLYLGADAKETLRGWRPTYRAILLGVRAKL 462 S+ R + + + EER+ + +LESRFLYL ADA+ +RG RP+YR +LLGVR +L Sbjct: 139 SIAKRPNSDYVDALDDIEERDIFISKLESRFLYLAADARSIIRGSRPSYRNVLLGVRREL 198
Query: 463 NVHCSAKLSTEDLEAEIFLHLLQQNTRERTNISLQSPWKHQ 585 V CS+KL T DLEAEIFLHLL + + + L PW Q Sbjct: 199 GVRCSSKLCTADLEAEIFLHLLDEYSSRQKGSDL-FPWNKQ 238
>tr|B8BCI3|B8BCI3_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_31585 PE=4 SV=1 Length = 384
Score = 117 bits (293), Expect = 6e-25 Identities = 90/221 (40%), Positives = 114/221 (51%), Gaps = 40/221 (18%) Frame = +1
Query: 43 ASMEPLPCLSPTFTPF--------RWSPA----TKLQHMTPSVVCVRP---HRTSVALSA 177 AS PLP LSP P R +PA T + V +RP R S + SA Sbjct: 16 ASRSPLP-LSPATRPAPASSRFGDRRAPAVVAATARRRGAHGVRALRPLLLPRASASPSA 74
Query: 178 TL------DRDLRDVLELASDAELHDLANILYG------------------QSLLSPLLK 285 D +LR VLELA+D EL + ILYG +S SPLLK Sbjct: 75 KTAAGGMSDPELRMVLELATDEELMEFEEILYGTSYEPQMAKPKPANLSKIKSYFSPLLK 134
Query: 286 SVT-RGDGSHKKFDQETEEREALVERLESRFLYLGADAKETLRGWRPTYRAILLGVRAKL 462 S+ R + + + EER+ + +LESRFLYL ADA+ +RG RP+YR +LLGVR +L Sbjct: 135 SIAKRPNSDYVDALDDIEERDIFISKLESRFLYLAADARSIIRGSRPSYRNVLLGVRREL 194
Query: 463 NVHCSAKLSTEDLEAEIFLHLLQQNTRERTNISLQSPWKHQ 585 V CS+KL T DLEAEIFLHLL + + + L PW Q Sbjct: 195 GVRCSSKLCTADLEAEIFLHLLDEYSSRQKGPDL-FPWNKQ 234
>tr|B2GVN0|B2GVN0_ARATH At1g73470 OS=Arabidopsis thaliana PE=2 SV=1 Length = 248
Score = 96.7 bits (239), Expect = 1e-18 Identities = 47/93 (50%), Positives = 64/93 (68%) Frame = +1
Query: 325 QETEEREALVERLESRFLYLGADAKETLRGWRPTYRAILLGVRAKLNVHCSAKLSTEDLE 504 Q+ E R+ +E LESRFL+L ADA+ TLRGWRP+YR +LL VR LN+ CS++L TEDLE Sbjct: 4 QDIEVRDGFIEALESRFLFLAADARSTLRGWRPSYRNVLLAVRNNLNIPCSSQLPTEDLE 63
Query: 505 AEIFLHLLQQNTRERTNISLQSPWKHQLAGSAE 603 AEIFL+L+ + E + + W++ AE Sbjct: 64 AEIFLYLVDNFSSEASGV-FPGMWENSEVSEAE 95
>tr|Q3M732|Q3M732_ANAVT Putative uncharacterized protein OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=Ava_3598 PE=4 SV=1 Length = 280
Score = 70.9 bits (172), Expect = 7e-11 Identities = 49/117 (41%), Positives = 68/117 (58%), Gaps = 2/117 (1%) Frame = +1
Query: 190 DLRDVLELASDAELHDLANILYGQSLLSPLLKSVTRGDGSHKKFDQETEEREALVERLES 369 +LR LELA+D EL DL IL+ + +PL T + + +++ REA ++ LE+ Sbjct: 3 ELRAALELATDEELQDLTAILFSRKF-NPLDYVQTP-----EPIEIQSQNREAWLDSLEN 56
Query: 370 RFLYLGADAKETLRGW--RPTYRAILLGVRAKLNVHCSAKLSTEDLEAEIFLHLLQQ 534 RF +L AD LRG + TYR L+ V L + S L+T DLEAE+FLHLL Q Sbjct: 57 RFRFLAADGVTVLRGRTSQVTYRQALIQVCKYLKIPYSQDLTTIDLEAEVFLHLLGQ 113
>tr|Q10W25|Q10W25_TRIEI Putative uncharacterized protein OS=Trichodesmium erythraeum (strain IMS101) GN=Tery_4573 PE=4 SV=1 Length = 286
Score = 70.5 bits (171), Expect = 8e-11 Identities = 46/115 (40%), Positives = 67/115 (58%), Gaps = 2/115 (1%) Frame = +1
Query: 190 DLRDVLELASDAELHDLANILYGQSLLSPLLKSVTRGDGSHKKFDQETEEREALVERLES 369 +LR VLELA++ EL L +L+G+ + +PL T D ++ +R ++ L+ Sbjct: 16 ELRAVLELATEEELQQLTELLFGRGI-NPLDYFQTP-----LPIDVQSRDRHVWLDALDQ 69
Query: 370 RFLYLGADAKETLRG--WRPTYRAILLGVRAKLNVHCSAKLSTEDLEAEIFLHLL 528 RF YL AD LRG + TYR +L+ V L + S KLST DLEAE+FL++L Sbjct: 70 RFRYLAADGMTVLRGKTQKVTYRQVLIKVCDYLKIPYSQKLSTTDLEAEVFLNVL 124
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