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NBDC - LSDB Archive
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DK958435
Clone id TST39A01NGRL0030_P23
Library
Length 555
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0030_P23. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GAGGGGGCCCGAGAGGGAGAAGCTCGTGTTTGTTTGCAGAAATGGCTGCCATGCAGGCGA
CATTGGGCGTTTCCTGCCCTTCTTCGTCTCTATGCAAGTCGTCTTTCTTGGGGAGCGCCT
CTCGTCTTTCTCGGGTGGCCTCTGCTATTGCCCCTTCCCCTGTCCGTGCCTTCAAGGTCG
AGGCAAAGAAAGGCGAATGGCTTCCCGGTCTGGCATCCCCTGCTTACCTAGACGGAAACC
TTGCTGGTGACAATGGCTTCGACCCCCTTGGCTTGGCTGAGGATCCTGCCAACCTTAAAT
GGTATGTGCAAGCAGAGCTTCAAAATGGAAGATGGGCAATGCTTGGAGTAGCTGGCATGT
TGATCCCCGACCTCTTGACAAAGATTGGTATCATCAATGTTCCTGCATGGTATGATGCGG
GCAAGGTCGAGTACTTCGCCCCCGCCTCCACTCTCTTTGTGATCGAATTCATCTTGTTCC
ACTATGTGGAGGTGAGAAGATGGCAAGACATCAAGTACCCTGGCAGTGTGAATGCCGATC
CGTTCAACCCTAAGC
■■Homology search results ■■ -
sp_hit_id P27521
Definition sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana
Align length 125
Score (bit) 228.0
E-value 1.0e-59
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK958435|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0030_P23, 5'
         (555 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4, chloropl...   228   1e-59
sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4, chloropla...   222   8e-58
sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20, chl...   166   5e-41
sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplas...   160   5e-39
sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7, chloropl...   155   2e-37
sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A, c...    94   4e-19
sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8, chloropl...    94   4e-19
sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24, chloro...    91   4e-18
sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplas...    91   4e-18
sp|P27525|CB4B_SOLLC Chlorophyll a-b binding protein CP24 10B, c...    85   2e-16
sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A, chlorop...    83   8e-16
sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21, chl...    77   4e-14
sp|Q9XF89|CB26_ARATH Chlorophyll a-b binding protein CP26, chlor...    68   3e-11
sp|P08976|LH18_EUGGR Light-harvesting complex I LH38 proteins (F...    66   1e-10
sp|P14273|CB2_CHLRE Chlorophyll a-b binding protein of LHCII typ...    66   1e-10
sp|P22686|CB2_CHLMO Chlorophyll a-b binding protein of LHCII typ...    65   3e-10
sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast...    62   1e-09
sp|P27517|CB2_DUNTE Chlorophyll a-b binding protein of LHCII typ...    62   2e-09
sp|P08975|LH15_EUGGR Light-harvesting complex I LH35 proteins (F...    61   4e-09
sp|P27490|CB28_PEA Chlorophyll a-b binding protein 8, chloroplas...    59   2e-08
sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chlorop...    59   2e-08
sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII ty...    59   2e-08
sp|P27523|CB23_HORVU Chlorophyll a-b binding protein of LHCII ty...    59   2e-08
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl...    59   2e-08
sp|P04159|CB21_PEA Chlorophyll a-b binding protein AB96 (Fragmen...    59   2e-08
sp|P04778|CB22_ARATH Chlorophyll a-b binding protein 2, chloropl...    58   3e-08
sp|P04777|CB21_ARATH Chlorophyll a-b binding protein 165/180, ch...    58   3e-08
sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb...    58   4e-08
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...    58   4e-08
sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplas...    58   4e-08

>sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4,
           chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1
          Length = 251

 Score =  228 bits (582), Expect = 1e-59
 Identities = 106/125 (84%), Positives = 115/125 (92%)
 Frame = +3

Query: 168 AFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAMLG 347
           +FKVEAKKGEWLPGLASP YL G+LAGDNGFDPLGLAEDP NLKW+VQAEL NGRWAMLG
Sbjct: 47  SFKVEAKKGEWLPGLASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLG 106

Query: 348 VAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIKYPGS 527
           VAGML+P++ TKIGIINVP WYDAGK +YFA +STLFVIEFILFHYVE+RRWQDIK PGS
Sbjct: 107 VAGMLLPEVFTKIGIINVPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGS 166

Query: 528 VNADP 542
           VN DP
Sbjct: 167 VNQDP 171


>sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4,
           chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1
          Length = 252

 Score =  222 bits (566), Expect = 8e-58
 Identities = 104/129 (80%), Positives = 113/129 (87%)
 Frame = +3

Query: 156 SPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRW 335
           SP  +FKVEAKKGEWLPGLASP YL G+L GDNGFDPLGLAEDP NL+W+VQAEL NGRW
Sbjct: 42  SPSASFKVEAKKGEWLPGLASPGYLTGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRW 101

Query: 336 AMLGVAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIK 515
           AMLGVAGML+P++ T IGIINVP WY AGK EYFA +STLFVIEFIL HYVE+RRWQDIK
Sbjct: 102 AMLGVAGMLLPEVFTSIGIINVPKWYAAGKEEYFASSSTLFVIEFILSHYVEIRRWQDIK 161

Query: 516 YPGSVNADP 542
            PGSVN DP
Sbjct: 162 NPGSVNQDP 170


>sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20,
           chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20
           PE=1 SV=1
          Length = 231

 Score =  166 bits (421), Expect = 5e-41
 Identities = 86/139 (61%), Positives = 101/139 (72%), Gaps = 1/139 (0%)
 Frame = +3

Query: 129 SRVASAIAPSPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYV 308
           S  AS    S  R   V+AK G WLPGL SPAYLDG+L GDNGFDPL LAEDP +L+W+V
Sbjct: 14  SPAASGSPRSTRRDVAVQAK-GSWLPGLQSPAYLDGSLEGDNGFDPLALAEDPEDLRWFV 72

Query: 309 QAELQNGRWAMLGVAGMLIPDLLTKIGIINVPAWYD-AGKVEYFAPASTLFVIEFILFHY 485
           QA++ NGRWAMLGVAGMLIP++LTK G++N P W    GK  YFA +ST   +  +   Y
Sbjct: 73  QADVVNGRWAMLGVAGMLIPEVLTKAGLMNAPEWLRLPGKETYFASSSTALRVH-MSSTY 131

Query: 486 VEVRRWQDIKYPGSVNADP 542
           VE+RRWQDIK PGSVN DP
Sbjct: 132 VEIRRWQDIKNPGSVNQDP 150


>sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplastic
           OS=Petunia hybrida PE=2 SV=1
          Length = 270

 Score =  160 bits (404), Expect = 5e-39
 Identities = 78/145 (53%), Positives = 94/145 (64%), Gaps = 5/145 (3%)
 Frame = +3

Query: 132 RVASAIAPSPVRAFKVEAKKGE-----WLPGLASPAYLDGNLAGDNGFDPLGLAEDPANL 296
           RV+  IAP   R+  V A   +     W PG   P +LDG+L GD GFDPLGL  DP +L
Sbjct: 41  RVSKFIAPVGSRSVAVSAVAADPDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPESL 100

Query: 297 KWYVQAELQNGRWAMLGVAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFIL 476
           KW  QAEL + RWAMLG AG+ IP+ LTKIG++N P+WY AG+ EYF   +TLFVIE +L
Sbjct: 101 KWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVLNTPSWYTAGEQEYFTDTTTLFVIELVL 160

Query: 477 FHYVEVRRWQDIKYPGSVNADPFNP 551
             + E RRW DI  PG VN DP  P
Sbjct: 161 IGWAEGRRWADIIKPGCVNTDPIFP 185



 Score = 33.9 bits (76), Expect = 0.55
 Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +3

Query: 231 DGNLAGDNGFDPLGLAE-DPANLKWYVQAELQNGRWAMLGVAGMLIPDLLTKIGIIN 398
           D    G   FDPLG     PA +K     E++NGR AML V G     + T  G I+
Sbjct: 193 DVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPID 249


>sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7,
           chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1
          Length = 270

 Score =  155 bits (391), Expect = 2e-37
 Identities = 70/118 (59%), Positives = 85/118 (72%)
 Frame = +3

Query: 198 WLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAMLGVAGMLIPDLL 377
           W PG   P +LDG+L GD GFDPLGLA DP +L+W  QAEL + RWAMLG AG+ IP+LL
Sbjct: 68  WFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPELL 127

Query: 378 TKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIKYPGSVNADPFNP 551
           TKIGI+N P+WY AG+ EYF   +TLF++E +L  + E RRW DI  PG VN DP  P
Sbjct: 128 TKIGILNTPSWYTAGEQEYFTDTTTLFIVELVLIGWAEGRRWADIIKPGCVNTDPIFP 185



 Score = 33.9 bits (76), Expect = 0.55
 Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +3

Query: 231 DGNLAGDNGFDPLGLAE-DPANLKWYVQAELQNGRWAMLGVAGMLIPDLLTKIGIIN 398
           D    G   FDPLG     PA +K     E++NGR AML V G     + T  G I+
Sbjct: 193 DVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPID 249


>sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A,
           chloroplastic OS=Solanum lycopersicum GN=CAP10A PE=3
           SV=1
          Length = 256

 Score = 94.0 bits (232), Expect = 4e-19
 Identities = 60/150 (40%), Positives = 77/150 (51%), Gaps = 9/150 (6%)
 Frame = +3

Query: 129 SRVASAIAPSPVRAFKVEAKKGEWLPG------LASPAYLDGNLAGDNGFDPLGLAEDPA 290
           +RV  A  P         AKK  W+P       L  P +LDG+L GD GFDPLGL +DPA
Sbjct: 33  ARVGGAATPKRFTVLAAAAKKS-WIPAVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPA 91

Query: 291 NLKWYVQAELQNGRWAMLGVAGMLIPDLLTKIGIINVPAWYDAG-KVEYFAPAS--TLFV 461
            LKWY +AEL +GRWAM  V G+ +    + I       W++AG      AP S  TL  
Sbjct: 92  FLKWYREAELIHGRWAMAAVLGIFVGQAWSGI------PWFEAGADPGAIAPFSFGTLLG 145

Query: 462 IEFILFHYVEVRRWQDIKYPGSVNADPFNP 551
            + IL  +VE +RW D   P S + +   P
Sbjct: 146 TQLILMGWVESKRWVDFFDPDSQSVEWATP 175


>sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8,
           chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1
          Length = 273

 Score = 94.0 bits (232), Expect = 4e-19
 Identities = 63/156 (40%), Positives = 80/156 (51%), Gaps = 15/156 (9%)
 Frame = +3

Query: 123 RLSRVASAIAPSPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANL-- 296
           + S V  A +  PV   K  A +  W     S +YLDG L GD GFDPLGL+ DP     
Sbjct: 34  KASFVVRAASTPPV---KQGANRQLWFASKQSLSYLDGRLPGDFGFDPLGLS-DPEGTGG 89

Query: 297 ----KWYVQAELQNGRWAMLGVAGMLIPDLLTKIGII---NVPAWYD------AGKVEYF 437
               KW    E+ NGR+AMLG AG + P++L K G+I      AW+       AG   Y+
Sbjct: 90  FIEPKWLAYGEVINGRFAMLGAAGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYW 149

Query: 438 APASTLFVIEFILFHYVEVRRWQDIKYPGSVNADPF 545
           A   TLFV+E  L  + E RR+QD   PGS+    F
Sbjct: 150 ADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYF 185



 Score = 43.5 bits (101), Expect = 7e-04
 Identities = 25/63 (39%), Positives = 34/63 (53%)
 Frame = +3

Query: 201 LPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAMLGVAGMLIPDLLT 380
           L G   PAY  G L     F+PLG  +D  ++K     E++NGR AML + G  I  L+T
Sbjct: 192 LGGSGDPAYPGGPL-----FNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQALVT 246

Query: 381 KIG 389
            +G
Sbjct: 247 GVG 249


>sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24,
           chloroplastic OS=Spinacia oleracea PE=2 SV=1
          Length = 261

 Score = 90.9 bits (224), Expect = 4e-18
 Identities = 55/129 (42%), Positives = 71/129 (55%), Gaps = 6/129 (4%)
 Frame = +3

Query: 183 AKKGEWLPGLAS------PAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAML 344
           A K  W+P +        P +LDG+L GD GFDPLGL +DPA LKWY +AEL +GRWAML
Sbjct: 55  APKKSWIPAVKGGGNFLDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAML 114

Query: 345 GVAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIKYPG 524
            V G+ +    T  GI    A  D G V  F+   TL   + +L  +VE +RW D   P 
Sbjct: 115 AVLGIFVGQAWT--GIPWFEAGADPGAVAPFS-FGTLLGTQLLLMGWVESKRWVDFFDPD 171

Query: 525 SVNADPFNP 551
           S + +   P
Sbjct: 172 SQSVEWATP 180


>sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplastic
           OS=Pisum sativum GN=lhca3 PE=1 SV=1
          Length = 275

 Score = 90.9 bits (224), Expect = 4e-18
 Identities = 59/149 (39%), Positives = 78/149 (52%), Gaps = 15/149 (10%)
 Frame = +3

Query: 144 AIAPSPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANL------KWY 305
           A A  PV+   V+  +  W     S +YLDG+L GD GFDPLGL+ DP         +W 
Sbjct: 42  AAATPPVKQGGVD--RPLWFASKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPRWL 98

Query: 306 VQAELQNGRWAMLGVAGMLIPDLLTKIGII---NVPAWYD------AGKVEYFAPASTLF 458
              E+ NGR+AMLG  G + P+ L K+G+I      AW+       AG   Y+A   TLF
Sbjct: 99  AYGEVINGRFAMLGAVGAIAPEYLGKVGLIPQETALAWFQTGVIPPAGTYNYWADNYTLF 158

Query: 459 VIEFILFHYVEVRRWQDIKYPGSVNADPF 545
           V+E  L  + E RR+QD   PGS+    F
Sbjct: 159 VLEMALMGFAEHRRFQDWAKPGSMGKQYF 187



 Score = 42.4 bits (98), Expect = 0.002
 Identities = 24/61 (39%), Positives = 33/61 (54%)
 Frame = +3

Query: 207 GLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAMLGVAGMLIPDLLTKI 386
           G  +PAY  G       F+PLG  +D  +LK     E++NGR AML + G  I  L+T +
Sbjct: 196 GSGNPAYPGGPF-----FNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGV 250

Query: 387 G 389
           G
Sbjct: 251 G 251


>sp|P27525|CB4B_SOLLC Chlorophyll a-b binding protein CP24 10B,
           chloroplastic OS=Solanum lycopersicum GN=CAP10B PE=3
           SV=1
          Length = 256

 Score = 85.1 bits (209), Expect = 2e-16
 Identities = 50/118 (42%), Positives = 67/118 (56%), Gaps = 9/118 (7%)
 Frame = +3

Query: 183 AKKGEWLPGLAS------PAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAML 344
           A K  W+P + S      P +LDG+L GD GFDPLGL +DPA LKWY +AEL +GRWAM 
Sbjct: 50  APKKSWIPAVKSGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMA 109

Query: 345 GVAGMLIPDLLTKIGIINVPAWYDAG-KVEYFAPAS--TLFVIEFILFHYVEVRRWQD 509
            V G+ +    + I       W++AG      AP S  +L   + +L  +VE +RW D
Sbjct: 110 AVLGIFVGQAWSGI------PWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVD 161
tr_hit_id Q07489
Definition tr|Q07489|Q07489_PINSY Lhca4 protein,Type 4 protein of light-harvesting complex of photosystem I OS=Pinus sylvestris
Align length 164
Score (bit) 236.0
E-value 5.0e-61
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK958435|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0030_P23, 5'
         (555 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q07489|Q07489_PINSY Lhca4 protein,Type 4 protein of light-har...   236   5e-61
tr|Q41039|Q41039_PINSY Lhca4 protein,Type 4 protein of light-har...   235   1e-60
tr|A9NUC5|A9NUC5_PICSI Putative uncharacterized protein OS=Picea...   234   3e-60
tr|B1PDK1|B1PDK1_CAPAN Chloroplast chlorophyll a/b binding prote...   231   1e-59
tr|A5AEI0|A5AEI0_VITVI Putative uncharacterized protein (Chromos...   231   1e-59
tr|Q8RVI8|Q8RVI8_PINPS Putative chlorophyll a/b-binding protein ...   230   4e-59
tr|B7FJY9|B7FJY9_MEDTR Putative uncharacterized protein OS=Medic...   229   6e-59
tr|Q1H8L9|Q1H8L9_SOLTU Chlorophyll a/b binding protein OS=Solanu...   227   4e-58
tr|Q7XAC6|Q7XAC6_BETVU Chlorophyll a /b binding protein OS=Beta ...   226   8e-58
tr|Q7M1K9|Q7M1K9_SOLLC Chlorophyll a/b-binding protein (cab-11) ...   225   1e-57
tr|Q7M1K8|Q7M1K8_SOLLC Chlorophyll a/b-binding protein (cab-12) ...   224   3e-57
tr|B6SZR1|B6SZR1_MAIZE Chlorophyll a-b binding protein 4 OS=Zea ...   224   3e-57
tr|A9PIX4|A9PIX4_POPJC Putative uncharacterized protein OS=Popul...   224   3e-57
tr|B4FV94|B4FV94_MAIZE Chlorophyll a-b binding protein 4 OS=Zea ...   221   2e-56
tr|B6TNZ8|B6TNZ8_MAIZE Chlorophyll a-b binding protein 4 OS=Zea ...   219   1e-55
tr|B6TFT2|B6TFT2_MAIZE Chlorophyll a-b binding protein 4 OS=Zea ...   217   3e-55
tr|B8LS59|B8LS59_BAMOL Photosystem I light-harvesting complex ty...   216   6e-55
tr|Q6YWJ7|Q6YWJ7_ORYSJ Os08g0435900 protein OS=Oryza sativa subs...   212   9e-54
tr|Q6SYB3|Q6SYB3_ORYSJ Chlorophyll a/b binding protein presusor ...   212   9e-54
tr|A2YVJ1|A2YVJ1_ORYSI Putative uncharacterized protein OS=Oryza...   212   9e-54
tr|Q9LKC7|Q9LKC7_HORVU Chlorophyll a/b-binding protein (Fragment...   210   4e-53
tr|Q9ZSU1|Q9ZSU1_ORYSA Chlorophyll a/b-binding protein presursor...   209   6e-53
tr|A2YVI8|A2YVI8_ORYSI Putative uncharacterized protein OS=Oryza...   209   1e-52
tr|Q40481|Q40481_TOBAC Light-harvesting chlorophyll a /b binding...   206   9e-52
tr|B6DYZ9|B6DYZ9_LIQST Chloroplast chlorophyll a-b binding prote...   185   2e-45
tr|B6DZ35|B6DZ35_9MAGN Chloroplast chlorophyll a-b binding prote...   184   4e-45
tr|B6DZ26|B6DZ26_9MAGN Chloroplast chlorophyll a-b binding prote...   183   5e-45
tr|B6DZ24|B6DZ24_9MAGN Chloroplast chlorophyll a-b binding prote...   183   5e-45
tr|B6DZ20|B6DZ20_9MAGN Chloroplast chlorophyll a-b binding prote...   183   5e-45
tr|B6DZ12|B6DZ12_9MAGN Chloroplast chlorophyll a-b binding prote...   183   5e-45

>tr|Q07489|Q07489_PINSY Lhca4 protein,Type 4 protein of
           light-harvesting complex of photosystem I OS=Pinus
           sylvestris GN=Lhca4*1-1 PE=2 SV=1
          Length = 251

 Score =  236 bits (603), Expect = 5e-61
 Identities = 118/164 (71%), Positives = 131/164 (79%), Gaps = 1/164 (0%)
 Frame = +3

Query: 54  QATLGVXXXXXXXXXXXXXXXXXRLSR-VASAIAPSPVRAFKVEAKKGEWLPGLASPAYL 230
           QA LGV                 RL+R V     P+P R+FKVEAK GEWLPGL+SP+YL
Sbjct: 7   QAALGVSCPSVCRSAFLTGSSVSRLARRVRPGSNPAPARSFKVEAK-GEWLPGLSSPSYL 65

Query: 231 DGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAMLGVAGMLIPDLLTKIGIINVPAW 410
           +G+L GDNGFDPLGLAEDP +LKWYVQAEL NGRWAMLGVAGMLIP++LT IG+INVP W
Sbjct: 66  NGSLPGDNGFDPLGLAEDPESLKWYVQAELVNGRWAMLGVAGMLIPEVLTSIGLINVPKW 125

Query: 411 YDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIKYPGSVNADP 542
           YDAGKVEYFA +STLFVIEFILFHYVE+RRWQDIKYPGSVN DP
Sbjct: 126 YDAGKVEYFASSSTLFVIEFILFHYVELRRWQDIKYPGSVNQDP 169


>tr|Q41039|Q41039_PINSY Lhca4 protein,Type 4 protein of
           light-harvesting complex of photosystem I (Fragment)
           OS=Pinus sylvestris GN=Lhca4*1-2 PE=2 SV=1
          Length = 244

 Score =  235 bits (599), Expect = 1e-60
 Identities = 111/137 (81%), Positives = 123/137 (89%)
 Frame = +3

Query: 132 RVASAIAPSPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQ 311
           RV     P+P R+FKVEAK GEWLPGL+SP+YL+G+L GDNGFDPLGLAEDP +LKWYVQ
Sbjct: 27  RVRPGSNPAPARSFKVEAK-GEWLPGLSSPSYLNGSLPGDNGFDPLGLAEDPESLKWYVQ 85

Query: 312 AELQNGRWAMLGVAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVE 491
           AEL NGRWAMLGVAGMLIP++LT IG+INVP WYDAGKVEYFA +STLFVIEFILFHYVE
Sbjct: 86  AELVNGRWAMLGVAGMLIPEVLTSIGLINVPKWYDAGKVEYFASSSTLFVIEFILFHYVE 145

Query: 492 VRRWQDIKYPGSVNADP 542
           +RRWQDIKYPGSVN DP
Sbjct: 146 LRRWQDIKYPGSVNQDP 162


>tr|A9NUC5|A9NUC5_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 251

 Score =  234 bits (596), Expect = 3e-60
 Identities = 117/164 (71%), Positives = 129/164 (78%), Gaps = 1/164 (0%)
 Frame = +3

Query: 54  QATLGVXXXXXXXXXXXXXXXXXRLSR-VASAIAPSPVRAFKVEAKKGEWLPGLASPAYL 230
           QATLGV                 RL+R V     P+P R+FKVEAK GEWLPGL+SP YL
Sbjct: 7   QATLGVSCRSVCRSGFLTGSSVSRLARRVRPGSNPAPARSFKVEAK-GEWLPGLSSPTYL 65

Query: 231 DGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAMLGVAGMLIPDLLTKIGIINVPAW 410
           +G+L GDNGFDPLGLAEDP +LKWYVQAEL NGRWAMLGVAGMLIP++LT  G I+VP W
Sbjct: 66  NGSLPGDNGFDPLGLAEDPESLKWYVQAELVNGRWAMLGVAGMLIPEVLTSFGFIDVPKW 125

Query: 411 YDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIKYPGSVNADP 542
           YDAGKVEYFA +STLFVIEFILFHYVE+RRWQDIKYPGSVN DP
Sbjct: 126 YDAGKVEYFASSSTLFVIEFILFHYVELRRWQDIKYPGSVNQDP 169


>tr|B1PDK1|B1PDK1_CAPAN Chloroplast chlorophyll a/b binding protein
           OS=Capsicum annuum PE=2 SV=1
          Length = 250

 Score =  231 bits (590), Expect = 1e-59
 Identities = 108/140 (77%), Positives = 120/140 (85%)
 Frame = +3

Query: 123 RLSRVASAIAPSPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKW 302
           +L+R  S    +   +FKVEAKKGEWLPGLASPAYLDG+L GDNGFDPLGLAEDP NLKW
Sbjct: 29  KLNREVSFRPSTSNNSFKVEAKKGEWLPGLASPAYLDGSLPGDNGFDPLGLAEDPENLKW 88

Query: 303 YVQAELQNGRWAMLGVAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFH 482
           Y+QAEL NGRWAMLGVAGML+P++ T IGI+NVP WYDAGK EYFA +STLFVIEFILFH
Sbjct: 89  YIQAELVNGRWAMLGVAGMLLPEVFTSIGILNVPKWYDAGKAEYFASSSTLFVIEFILFH 148

Query: 483 YVEVRRWQDIKYPGSVNADP 542
           YVE+RRWQDIK PG VN DP
Sbjct: 149 YVEIRRWQDIKNPGCVNQDP 168


>tr|A5AEI0|A5AEI0_VITVI Putative uncharacterized protein (Chromosome
           chr17 scaffold_12, whole genome shotgun sequence)
           OS=Vitis vinifera GN=GSVIVT00016319001 PE=4 SV=1
          Length = 252

 Score =  231 bits (590), Expect = 1e-59
 Identities = 107/129 (82%), Positives = 116/129 (89%)
 Frame = +3

Query: 156 SPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRW 335
           S  R+FKVEAKKGEWLPGL+SP+YLDG+L GDNGFDPLGLAEDP NLKWYVQAEL N RW
Sbjct: 42  SSYRSFKVEAKKGEWLPGLSSPSYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRW 101

Query: 336 AMLGVAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIK 515
           AMLGVAGML+P++ TKIGIIN P WYDAGK EYFA +STLFVIEFILFHYVE+RRWQDIK
Sbjct: 102 AMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIK 161

Query: 516 YPGSVNADP 542
            PGSVN DP
Sbjct: 162 NPGSVNQDP 170


>tr|Q8RVI8|Q8RVI8_PINPS Putative chlorophyll a/b-binding protein
           type 4 OS=Pinus pinaster PE=2 SV=1
          Length = 251

 Score =  230 bits (586), Expect = 4e-59
 Identities = 115/164 (70%), Positives = 128/164 (78%), Gaps = 1/164 (0%)
 Frame = +3

Query: 54  QATLGVXXXXXXXXXXXXXXXXXRLSR-VASAIAPSPVRAFKVEAKKGEWLPGLASPAYL 230
           QA LGV                 RL+R V     P+P R+FKVEAK GEWLPGL+SP+YL
Sbjct: 7   QAALGVSCPSVCRSGFLTGSSVSRLARRVRPGSNPAPARSFKVEAK-GEWLPGLSSPSYL 65

Query: 231 DGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAMLGVAGMLIPDLLTKIGIINVPAW 410
           +G+L GDNG DPLGLAEDP +LKWYVQAEL NGRWAMLGVAGM IP++LT IG+INVP W
Sbjct: 66  NGSLPGDNGXDPLGLAEDPESLKWYVQAELVNGRWAMLGVAGMXIPEVLTSIGLINVPKW 125

Query: 411 YDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIKYPGSVNADP 542
           YDAGKVEYFA + TLFVIEFILFHYVE+RRWQDIKYPGSVN DP
Sbjct: 126 YDAGKVEYFASSXTLFVIEFILFHYVELRRWQDIKYPGSVNQDP 169


>tr|B7FJY9|B7FJY9_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=2 SV=1
          Length = 253

 Score =  229 bits (585), Expect = 6e-59
 Identities = 107/129 (82%), Positives = 115/129 (89%)
 Frame = +3

Query: 156 SPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRW 335
           SP  +FKVEAKKGEWLPGLASP YL G+L GDNGFDPLGLAEDP NLKW+VQAEL NGRW
Sbjct: 42  SPSASFKVEAKKGEWLPGLASPGYLTGSLPGDNGFDPLGLAEDPENLKWFVQAELVNGRW 101

Query: 336 AMLGVAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIK 515
           AMLGVAGML+P++ T IGIINVP WYDAGK EYFA +STLFVIEFILFHYVE+RRWQDIK
Sbjct: 102 AMLGVAGMLLPEVFTNIGIINVPKWYDAGKEEYFASSSTLFVIEFILFHYVEIRRWQDIK 161

Query: 516 YPGSVNADP 542
            PGSVN DP
Sbjct: 162 NPGSVNQDP 170


>tr|Q1H8L9|Q1H8L9_SOLTU Chlorophyll a/b binding protein OS=Solanum
           tuberosum GN=cab1 PE=2 SV=1
          Length = 251

 Score =  227 bits (578), Expect = 4e-58
 Identities = 104/129 (80%), Positives = 115/129 (89%)
 Frame = +3

Query: 156 SPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRW 335
           S   +FKVEAKKG+WLPGLASP YLDG+L GDNGFDPLGLAEDP NLKW++QAEL NGRW
Sbjct: 42  SSYNSFKVEAKKGQWLPGLASPDYLDGSLPGDNGFDPLGLAEDPENLKWFIQAELVNGRW 101

Query: 336 AMLGVAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIK 515
           AMLGVAGML+P++ T IGI+NVP WYDAGK EYFA +STLFVIEFILFHYVE+RRWQDIK
Sbjct: 102 AMLGVAGMLLPEVFTSIGILNVPKWYDAGKSEYFASSSTLFVIEFILFHYVEIRRWQDIK 161

Query: 516 YPGSVNADP 542
            PGSVN DP
Sbjct: 162 NPGSVNQDP 170


>tr|Q7XAC6|Q7XAC6_BETVU Chlorophyll a /b binding protein OS=Beta
           vulgaris GN=cab11 PE=2 SV=1
          Length = 252

 Score =  226 bits (575), Expect = 8e-58
 Identities = 105/129 (81%), Positives = 115/129 (89%)
 Frame = +3

Query: 156 SPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRW 335
           S   + KVEAKKGEWLPGLASPAYL+G+L GDNGFDPL LAEDP NLKW+VQAEL NGRW
Sbjct: 42  SSTNSLKVEAKKGEWLPGLASPAYLNGSLPGDNGFDPLALAEDPENLKWFVQAELVNGRW 101

Query: 336 AMLGVAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIK 515
           AMLGVAGML+P++ T+IGIINVP WYDAGK EYFA +STLFVIEFILFHYVE+RRWQDIK
Sbjct: 102 AMLGVAGMLLPEVFTQIGIINVPKWYDAGKQEYFASSSTLFVIEFILFHYVEIRRWQDIK 161

Query: 516 YPGSVNADP 542
            PGSVN DP
Sbjct: 162 NPGSVNQDP 170


>tr|Q7M1K9|Q7M1K9_SOLLC Chlorophyll a/b-binding protein (cab-11)
           OS=Solanum lycopersicum PE=4 SV=1
          Length = 251

 Score =  225 bits (574), Expect = 1e-57
 Identities = 103/129 (79%), Positives = 114/129 (88%)
 Frame = +3

Query: 156 SPVRAFKVEAKKGEWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRW 335
           S   +FKVEAKKG+WLPGLASP YLDG+L GDNGFDPLGL EDP NLKW++QAEL NGRW
Sbjct: 42  SSYNSFKVEAKKGQWLPGLASPDYLDGSLPGDNGFDPLGLVEDPENLKWFIQAELVNGRW 101

Query: 336 AMLGVAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIK 515
           AMLGVAGML+P++ T IGI+NVP WYDAGK EYFA +STLFVIEFILFHYVE+RRWQDIK
Sbjct: 102 AMLGVAGMLLPEVFTSIGILNVPKWYDAGKSEYFASSSTLFVIEFILFHYVEIRRWQDIK 161

Query: 516 YPGSVNADP 542
            PGSVN DP
Sbjct: 162 NPGSVNQDP 170