DK958467 |
Clone id |
TST39A01NGRL0002_B08 |
Library |
TST39 |
Length |
608 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0002_B08. 5' end sequence. |
Accession |
DK958467 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL3Contig1 |
Sequence |
CATGGTCACCCCTGGTGCTGAGTGCAAGGATAGGGCTTCTCCTGAGAAGGTTGCTGAGTA CACACTGAACATGCTGAAGAGGAGAGTACCACCTGCAGTGCCTGGAATCATGTTCCTTTC TGGTGGCCAATCCGAAGTGGAAGCTACCTTGAACCTTAATGCGATGAACCAATCCCCCAA CCCCTGGCATGTGTCCTTCTCATATGCACGGGCGCTGCAAAACACCGTGCTTAAGACATG GGGTGGCAATCCTGAGAATGTGAAGAAGGCACAAACTTCCCTCCTCATCAGAGCGAAGGC CAACTCTTTGGCTCAGCTTGGCAAATACTCAGCAGAGGGAGAGAGTGAAGAGGCCAAGAA GGGTATGTTTGTCGCTGGGTATACATACTAAGAAGATAGTTTGTACCCATTTTGGTTCTG TGATCTGTCCAATCGTGTGAATCACCACCACTCACTATATGCTCTCTGCAGTTGTATATG CTGCCTAGTCAGTAAATTGTGAAAGGGATATGAGGTACCAAGTTTTTAATGTTATGGTAA ACCTCCATTTGTTGTATGCTGAGCAACTTGATTTGCCCATGTATCTTACATTATGGCAAT CAGTTTGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q944G9 |
Definition |
sp|Q944G9|ALFC2_ARATH Probable fructose-bisphosphate aldolase 2, chloroplastic OS=Arabidopsis thaliana |
Align length |
129 |
Score (bit) |
226.0 |
E-value |
5.0e-59 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK958467|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0002_B08, 5' (608 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q944G9|ALFC2_ARATH Probable fructose-bisphosphate aldolase 2,... 226 5e-59 sp|Q01516|ALFC1_PEA Fructose-bisphosphate aldolase 1, chloroplas... 222 1e-57 sp|Q40677|ALFC_ORYSJ Fructose-bisphosphate aldolase, chloroplast... 220 4e-57 sp|Q9ZU52|ALFC3_ARATH Probable fructose-bisphosphate aldolase 3,... 220 4e-57 sp|Q9SJU4|ALFC1_ARATH Probable fructose-bisphosphate aldolase 1,... 219 1e-56 sp|Q01517|ALFC2_PEA Fructose-bisphosphate aldolase 2, chloroplas... 212 1e-54 sp|Q42690|ALFC_CHLRE Fructose-bisphosphate aldolase 1, chloropla... 168 2e-41 sp|P16096|ALFC_SPIOL Fructose-bisphosphate aldolase, chloroplast... 164 3e-40 sp|P29356|ALF_SPIOL Fructose-bisphosphate aldolase, cytoplasmic ... 140 4e-33 sp|Q86A67|ALF_DICDI Fructose-bisphosphate aldolase OS=Dictyostel... 137 6e-32 sp|P46256|ALF1_PEA Fructose-bisphosphate aldolase, cytoplasmic i... 136 7e-32 sp|P05065|ALDOA_RAT Fructose-bisphosphate aldolase A OS=Rattus n... 135 1e-31 sp|P17784|ALF_ORYSJ Fructose-bisphosphate aldolase cytoplasmic i... 134 4e-31 sp|P46563|ALF2_CAEEL Fructose-bisphosphate aldolase 2 OS=Caenorh... 133 6e-31 sp|P05064|ALDOA_MOUSE Fructose-bisphosphate aldolase A OS=Mus mu... 132 1e-30 sp|O65735|ALF_CICAR Fructose-bisphosphate aldolase, cytoplasmic ... 132 2e-30 sp|A5A6I5|ALDOA_PANTR Fructose-bisphosphate aldolase A OS=Pan tr... 132 2e-30 sp|P04075|ALDOA_HUMAN Fructose-bisphosphate aldolase A OS=Homo s... 132 2e-30 sp|P00883|ALDOA_RABIT Fructose-bisphosphate aldolase A OS=Orycto... 131 3e-30 sp|Q5NVR5|ALDOA_PONAB Fructose-bisphosphate aldolase A OS=Pongo ... 130 5e-30 sp|P46257|ALF2_PEA Fructose-bisphosphate aldolase, cytoplasmic i... 129 1e-29 sp|P14223|ALF_PLAFA Fructose-bisphosphate aldolase OS=Plasmodium... 129 2e-29 sp|Q7KQL9|ALF_PLAF7 Fructose-bisphosphate aldolase OS=Plasmodium... 129 2e-29 sp|P22197|ALF_ARATH Fructose-bisphosphate aldolase, cytoplasmic ... 129 2e-29 sp|P07752|ALF_TRYBB Fructose-bisphosphate aldolase, glycosomal O... 128 2e-29 sp|P09117|ALDOC_RAT Fructose-bisphosphate aldolase C OS=Rattus n... 128 2e-29 sp|P53449|ALDOC_CHICK Fructose-bisphosphate aldolase C (Fragment... 127 3e-29 sp|P07341|ALDOB_CHICK Fructose-bisphosphate aldolase B OS=Gallus... 127 3e-29 sp|P08440|ALF_MAIZE Fructose-bisphosphate aldolase, cytoplasmic ... 127 4e-29 sp|P53445|ALF1_LAMJA Fructose-bisphosphate aldolase, muscle type... 127 6e-29
>sp|Q944G9|ALFC2_ARATH Probable fructose-bisphosphate aldolase 2, chloroplastic OS=Arabidopsis thaliana GN=FBA2 PE=1 SV=1 Length = 398
Score = 226 bits (577), Expect = 5e-59 Identities = 110/129 (85%), Positives = 118/129 (91%) Frame = +2
Query: 2 MVTPGAECKDRASPEKVAEYTLNMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQSPN 181 MVTPGAE KDRA+PE+VA YTL +L+ RVPPAVPGIMFLSGGQSEVEATLNLNAMNQ+PN Sbjct: 270 MVTPGAESKDRATPEQVAAYTLKLLRNRVPPAVPGIMFLSGGQSEVEATLNLNAMNQAPN 329
Query: 182 PWHVSFSYARALQNTVLKTWGGNPENVKKAQTSLLIRAKANSLAQLGKYSAEGESEEAKK 361 PWHVSFSYARALQNT LKTWGG PENV AQT+LL RAKANSLAQLGKY+ EGESEEAK+ Sbjct: 330 PWHVSFSYARALQNTCLKTWGGRPENVNAAQTTLLARAKANSLAQLGKYTGEGESEEAKE 389
Query: 362 GMFVAGYTY 388 GMFV GYTY Sbjct: 390 GMFVKGYTY 398
>sp|Q01516|ALFC1_PEA Fructose-bisphosphate aldolase 1, chloroplastic (Fragment) OS=Pisum sativum PE=1 SV=1 Length = 356
Score = 222 bits (565), Expect = 1e-57 Identities = 108/129 (83%), Positives = 117/129 (90%) Frame = +2
Query: 2 MVTPGAECKDRASPEKVAEYTLNMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQSPN 181 MVTPGAE KD+ASP KVAEYTLN+L RR+PPAVPGIMFLSGGQSEVEATLNLNAMN+SPN Sbjct: 228 MVTPGAESKDKASPTKVAEYTLNLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNKSPN 287
Query: 182 PWHVSFSYARALQNTVLKTWGGNPENVKKAQTSLLIRAKANSLAQLGKYSAEGESEEAKK 361 PWHVSFSYARALQNT LKTWGG PENVK AQ +LL RAK+NSLAQLGKY +GESEEAKK Sbjct: 288 PWHVSFSYARALQNTALKTWGGLPENVKAAQEALLFRAKSNSLAQLGKYYGDGESEEAKK 347
Query: 362 GMFVAGYTY 388 +FV GY+Y Sbjct: 348 ELFVKGYSY 356
>sp|Q40677|ALFC_ORYSJ Fructose-bisphosphate aldolase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os11g0171300 PE=1 SV=2 Length = 388
Score = 220 bits (561), Expect = 4e-57 Identities = 104/129 (80%), Positives = 117/129 (90%) Frame = +2
Query: 2 MVTPGAECKDRASPEKVAEYTLNMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQSPN 181 MVTPGAECKDRA+PE+V++YTL +L RR+PPAVPGIMFLSGGQSEVEAT NLNAMNQ PN Sbjct: 260 MVTPGAECKDRATPEQVSDYTLKLLHRRIPPAVPGIMFLSGGQSEVEATQNLNAMNQGPN 319
Query: 182 PWHVSFSYARALQNTVLKTWGGNPENVKKAQTSLLIRAKANSLAQLGKYSAEGESEEAKK 361 PWHVSFSYARALQNT LKTWGG PENVK AQ +LL+RAKANSLAQLGKY+++GE+ EAK+ Sbjct: 320 PWHVSFSYARALQNTCLKTWGGQPENVKAAQDALLLRAKANSLAQLGKYTSDGEAAEAKE 379
Query: 362 GMFVAGYTY 388 GMFV Y Y Sbjct: 380 GMFVKNYVY 388
>sp|Q9ZU52|ALFC3_ARATH Probable fructose-bisphosphate aldolase 3, chloroplastic OS=Arabidopsis thaliana GN=FBA3 PE=1 SV=1 Length = 391
Score = 220 bits (561), Expect = 4e-57 Identities = 106/129 (82%), Positives = 119/129 (92%) Frame = +2
Query: 2 MVTPGAECKDRASPEKVAEYTLNMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQSPN 181 MVTPGAE K++ASPE VA++TL MLKRRVPPAVPGIMFLSGGQSE EATLNLNAMNQSPN Sbjct: 263 MVTPGAEHKNKASPETVADFTLTMLKRRVPPAVPGIMFLSGGQSEAEATLNLNAMNQSPN 322
Query: 182 PWHVSFSYARALQNTVLKTWGGNPENVKKAQTSLLIRAKANSLAQLGKYSAEGESEEAKK 361 PWHVSFSYARALQN+VL+TW G PE ++ +Q +LL+RAKANSLAQLGKYSAEGE+E+AKK Sbjct: 323 PWHVSFSYARALQNSVLRTWQGKPEKIEASQKALLVRAKANSLAQLGKYSAEGENEDAKK 382
Query: 362 GMFVAGYTY 388 GMFV GYTY Sbjct: 383 GMFVKGYTY 391
>sp|Q9SJU4|ALFC1_ARATH Probable fructose-bisphosphate aldolase 1, chloroplastic OS=Arabidopsis thaliana GN=FBA1 PE=1 SV=2 Length = 399
Score = 219 bits (557), Expect = 1e-56 Identities = 106/129 (82%), Positives = 115/129 (89%) Frame = +2
Query: 2 MVTPGAECKDRASPEKVAEYTLNMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQSPN 181 MVTPGAE DRA+PE+VA YTL +L+ R+PPAVPGIMFLSGGQSE+EATLNLNAMNQ+PN Sbjct: 271 MVTPGAEATDRATPEQVASYTLKLLRNRIPPAVPGIMFLSGGQSELEATLNLNAMNQAPN 330
Query: 182 PWHVSFSYARALQNTVLKTWGGNPENVKKAQTSLLIRAKANSLAQLGKYSAEGESEEAKK 361 PWHVSFSYARALQNT LKTWGG ENVK AQ LL RAKANSLAQLGKY+ EGESEEAK+ Sbjct: 331 PWHVSFSYARALQNTCLKTWGGKEENVKAAQDILLARAKANSLAQLGKYTGEGESEEAKE 390
Query: 362 GMFVAGYTY 388 GMFV GYTY Sbjct: 391 GMFVKGYTY 399
>sp|Q01517|ALFC2_PEA Fructose-bisphosphate aldolase 2, chloroplastic OS=Pisum sativum PE=1 SV=2 Length = 349
Score = 212 bits (540), Expect = 1e-54 Identities = 106/129 (82%), Positives = 114/129 (88%) Frame = +2
Query: 2 MVTPGAECKDRASPEKVAEYTLNMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQSPN 181 MVTPGAE KD+ASP KVAEYTLN+L RR+PPAVPGIMFLSGGQSEVEATLNLNAMN+SPN Sbjct: 222 MVTPGAESKDKASPTKVAEYTLNLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNKSPN 281
Query: 182 PWHVSFSYARALQNTVLKTWGGNPENVKKAQTSLLIRAKANSLAQLGKYSAEGESEEAKK 361 PWHVSFSYARALQNT LKTWGG PENVK AQ +LL RAK+NSLAQLGKY +GESEEAKK Sbjct: 282 PWHVSFSYARALQNTALKTWGGLPENVKAAQEALLFRAKSNSLAQLGKYIGDGESEEAKK 341
Query: 362 GMFVAGYTY 388 GY+Y Sbjct: 342 DC-CQGYSY 349
>sp|Q42690|ALFC_CHLRE Fructose-bisphosphate aldolase 1, chloroplastic OS=Chlamydomonas reinhardtii GN=ALDCHL PE=2 SV=1 Length = 374
Score = 168 bits (425), Expect = 2e-41 Identities = 87/129 (67%), Positives = 99/129 (76%) Frame = +2
Query: 2 MVTPGAECKDRASPEKVAEYTLNMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQSPN 181 MVTPGA+CK++A P KVAEYTL ML R PP VPGIMFLSGGQSE+E+TLNLNAMNQSPN Sbjct: 246 MVTPGADCKNKAGPAKVAEYTLKMLAARAPP-VPGIMFLSGGQSELESTLNLNAMNQSPN 304
Query: 182 PWHVSFSYARALQNTVLKTWGGNPENVKKAQTSLLIRAKANSLAQLGKYSAEGESEEAKK 361 PWHVSFSYARAL NTVLKTW +P V+ + + R KANS AQ GKY A E +EA + Sbjct: 305 PWHVSFSYARALTNTVLKTWQASPRTVQAPRLAAQAR-KANSDAQQGKYDATTEGKEAAQ 363
Query: 362 GMFVAGYTY 388 GM+ G Y Sbjct: 364 GMYEKGKGY 372
>sp|P16096|ALFC_SPIOL Fructose-bisphosphate aldolase, chloroplastic OS=Spinacia oleracea PE=1 SV=3 Length = 394
Score = 164 bits (416), Expect = 3e-40 Identities = 90/130 (69%), Positives = 97/130 (74%), Gaps = 1/130 (0%) Frame = +2
Query: 2 MVTPGAECKDRASPEKVAEYTLNMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQSPN 181 MV PGA + PE+VA+Y L +L RR P VPGIM LSGGQSEVEATLNLNAMNQSPN Sbjct: 268 MVGPGALSARKGPPEQVADYPLKLLHRRRGPVVPGIMVLSGGQSEVEATLNLNAMNQSPN 327
Query: 182 PWHVSFSYARALQNTVLKTWGGNPENVKKAQTSLLIRAKANSLAQLGKYSAEGESEEAKK 361 PWHVSFSYARALQNT LKTW ENVK + AK+NSLAQLGKY+ EGESEE KK Sbjct: 328 PWHVSFSYARALQNTCLKTWVEGQENVKAQDFAC---AKSNSLAQLGKYTGEGESEERKK 384
Query: 362 GMFV-AGYTY 388 MFV A TY Sbjct: 385 DMFVKATLTY 394
>sp|P29356|ALF_SPIOL Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Spinacia oleracea PE=2 SV=1 Length = 357
Score = 140 bits (354), Expect = 4e-33 Identities = 74/131 (56%), Positives = 89/131 (67%), Gaps = 2/131 (1%) Frame = +2
Query: 2 MVTPGAECKDRASPEKVAEYTLNMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMN--QS 175 +VTPG+E K + +PE +AEYT+ L+R VP AVPG+MFLSGGQSE EATLNLNAMN ++ Sbjct: 228 IVTPGSESK-KVTPEVIAEYTVRTLQRTVPQAVPGVMFLSGGQSEEEATLNLNAMNKLET 286
Query: 176 PNPWHVSFSYARALQNTVLKTWGGNPENVKKAQTSLLIRAKANSLAQLGKYSAEGESEEA 355 PW +SFSY RALQ + LK W G ENV KAQ L RAK NS A LGKY +A Sbjct: 287 KKPWTLSFSYGRALQQSTLKAWQGKEENVAKAQEVFLARAKGNSEATLGKYQGGAGGADA 346
Query: 356 KKGMFVAGYTY 388 + + V Y Y Sbjct: 347 SESLHVKDYKY 357
>sp|Q86A67|ALF_DICDI Fructose-bisphosphate aldolase OS=Dictyostelium discoideum GN=fba PE=3 SV=1 Length = 357
Score = 137 bits (344), Expect = 6e-32 Identities = 67/130 (51%), Positives = 91/130 (70%), Gaps = 1/130 (0%) Frame = +2
Query: 2 MVTPGAECKDRASPEKVAEYTLNMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQSPN 181 MV G +C +A+ E++ ++T+ L+R VPPA+ G++FLSGGQ+E+EAT NLNAMN PN Sbjct: 228 MVVNGTDCPIKATSEQIGKFTVRTLQRTVPPALTGVVFLSGGQTEIEATANLNAMNVLPN 287
Query: 182 -PWHVSFSYARALQNTVLKTWGGNPENVKKAQTSLLIRAKANSLAQLGKYSAEGESEEAK 358 PW +SFSY RALQ +V+ TW G NV+ A+ L RAK NSLAQLGKY+ E + A Sbjct: 288 RPWALSFSYGRALQASVISTWKGESANVEAARKVYLHRAKCNSLAQLGKYTGEESTGSAS 347
Query: 359 KGMFVAGYTY 388 + ++V Y Y Sbjct: 348 ESLYVKDYKY 357
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9RX76 |
Definition |
tr|A9RX76|A9RX76_PHYPA Fructose-bisphosphate aldolase OS=Physcomitrella patens subsp. patens |
Align length |
129 |
Score (bit) |
239.0 |
E-value |
1.0e-61 |
Report |
|