DK958528 |
Clone id |
TST39A01NGRL0002_D23 |
Library |
TST39 |
Length |
524 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0002_D23. 5' end sequence. |
Accession |
DK958528 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL2327Contig1 |
Sequence |
CGAGCTTGACTGAACCCAGCCTTGTTTGTGCTCCACTTGGGAGGGGTCAAATTTGTTCTC CCTTGGTGGTGTACTTACTTTTCACTGCCAAAAGAGAGCAGCTACTTATTTGTGCTCCAC TTGGGGTCAAATTTGCTTGTTGTTGCGGGTCTTCGATTTCTCCTTCCCCCGACCTCGTTA TTCTTTGCGCTTGCTGTTTTTCTCACATCTAGCTTTCGAGCTGTTAGAAATCTCTCTGTC TCTCTCTCTCTCTCTCTCTTCCCTTGCGTTTTCTTCTCTCTGTGTGTATGTGTAGCTAGA CGGATTAGGGTCTCTATGTCTCTTTCAGGGATGAGAGGCCTGTCTGTCTTCATCAGCGAC ATTCGCAATTGCCAAAACAAAGAGCAGGAGCGCCTACTTGTTGACAAGGAGCTCGCAAAC ATCCGAACTCGCTTCAAGAATGAAAAGGGATTGTCTGTCTATGAAAAGAAGAAGTATGTA TGGAAGATGTTGTACATCTACATGCTTGGCTATGATGTGGATTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q29N38 |
Definition |
sp|Q29N38|AP2A_DROPS AP-2 complex subunit alpha OS=Drosophila pseudoobscura pseudoobscura |
Align length |
65 |
Score (bit) |
90.9 |
E-value |
3.0e-18 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9T668 |
Definition |
tr|A9T668|A9T668_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
69 |
Score (bit) |
134.0 |
E-value |
4.0e-30 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK958528|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0002_D23, 5' (524 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9T668|A9T668_PHYPA Predicted protein OS=Physcomitrella paten... 134 4e-30 tr|Q6JJ39|Q6JJ39_IPOTF Putative adapitin protein OS=Ipomoea trif... 132 8e-30 tr|A7PQK5|A7PQK5_VITVI Chromosome chr6 scaffold_25, whole genome... 132 8e-30 tr|A0A924|A0A924_IPOTF Putative uncharacterized protein OS=Ipomo... 132 8e-30 tr|Q10SS6|Q10SS6_ORYSJ Adaptin N terminal region family protein,... 132 1e-29 tr|Q10SS5|Q10SS5_ORYSJ Adaptin N terminal region family protein,... 132 1e-29 tr|A3ADE1|A3ADE1_ORYSJ Putative uncharacterized protein OS=Oryza... 132 1e-29 tr|A9U4D0|A9U4D0_PHYPA Predicted protein OS=Physcomitrella paten... 128 2e-28 tr|A9RSM0|A9RSM0_PHYPA Predicted protein OS=Physcomitrella paten... 127 3e-28 tr|Q9FNI4|Q9FNI4_ARATH Alpha-adaptin OS=Arabidopsis thaliana PE=... 116 8e-25 tr|Q9FGT0|Q9FGT0_ARATH Alpha-adaptin C homolog OS=Arabidopsis th... 116 8e-25 tr|Q8LPL6|Q8LPL6_ARATH Alpha-adaptin OS=Arabidopsis thaliana GN=... 116 8e-25 tr|Q8LPK4|Q8LPK4_ARATH Alpha-adaptin C-like protein OS=Arabidops... 116 8e-25 tr|A4SBN8|A4SBN8_OSTLU Predicted protein (Fragment) OS=Ostreococ... 98 3e-19 tr|A8ILF4|A8ILF4_CHLRE Alpha-adaptin OS=Chlamydomonas reinhardti... 97 5e-19 tr|A4S6T6|A4S6T6_OSTLU Predicted protein (Fragment) OS=Ostreococ... 96 8e-19 tr|A0D1K9|A0D1K9_PARTE Chromosome undetermined scaffold_34, whol... 95 2e-18 tr|B6MH62|B6MH62_BRAFL Putative uncharacterized protein OS=Branc... 92 2e-17 tr|B6M6Q4|B6M6Q4_BRAFL Putative uncharacterized protein OS=Branc... 92 2e-17 tr|B7P9Z2|B7P9Z2_IXOSC AP-2 complex subunit alpha-1, putative OS... 91 3e-17 tr|Q6NVT5|Q6NVT5_XENTR Adaptor-related protein complex 2, alpha ... 91 3e-17 tr|Q5F3T4|Q5F3T4_CHICK Putative uncharacterized protein OS=Gallu... 91 3e-17 tr|Q5BJ37|Q5BJ37_XENLA MGC99219 protein OS=Xenopus laevis GN=ap2... 91 3e-17 tr|Q4SW01|Q4SW01_TETNG Chromosome undetermined SCAF13700, whole ... 91 3e-17 tr|Q28DU5|Q28DU5_XENTR Daptor-related protein complex 2, alpha 2... 91 3e-17 tr|Q0IHS1|Q0IHS1_XENTR Ap2a1 protein OS=Xenopus tropicalis GN=ap... 91 3e-17 tr|Q8C2J5|Q8C2J5_MOUSE Putative uncharacterized protein OS=Mus m... 91 3e-17 tr|Q69ZW4|Q69ZW4_MOUSE MKIAA0899 protein (Fragment) OS=Mus muscu... 91 3e-17 tr|Q66HM2|Q66HM2_RAT Adaptor protein complex AP-2, alpha 2 subun... 91 3e-17 tr|Q1JPJ7|Q1JPJ7_BOVIN Adaptor-related protein complex 2, short ... 91 3e-17
>tr|A9T668|A9T668_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_140846 PE=4 SV=1 Length = 1009
Score = 134 bits (336), Expect = 4e-30 Identities = 63/69 (91%), Positives = 68/69 (98%) Frame = +1
Query: 316 MSLSGMRGLSVFISDIRNCQNKEQERLLVDKELANIRTRFKNEKGLSVYEKKKYVWKMLY 495 M+LSGMRGLSVFISD+RNCQNKEQER+ VDKELANIRTRFKNE+GLSVYEKKKYVWK+LY Sbjct: 1 MALSGMRGLSVFISDVRNCQNKEQERVRVDKELANIRTRFKNERGLSVYEKKKYVWKILY 60
Query: 496 IYMLGYDVD 522 IYMLGYDVD Sbjct: 61 IYMLGYDVD 69
>tr|Q6JJ39|Q6JJ39_IPOTF Putative adapitin protein OS=Ipomoea trifida PE=4 SV=1 Length = 1080
Score = 132 bits (333), Expect = 8e-30 Identities = 63/69 (91%), Positives = 66/69 (95%) Frame = +1
Query: 316 MSLSGMRGLSVFISDIRNCQNKEQERLLVDKELANIRTRFKNEKGLSVYEKKKYVWKMLY 495 M+LSGMRGLSVFISDIRNCQNKEQERL VDKEL N+RTRFKNEKGL+ YEKKKYVWKMLY Sbjct: 1 MALSGMRGLSVFISDIRNCQNKEQERLRVDKELGNVRTRFKNEKGLTPYEKKKYVWKMLY 60
Query: 496 IYMLGYDVD 522 IYMLGYDVD Sbjct: 61 IYMLGYDVD 69
>tr|A7PQK5|A7PQK5_VITVI Chromosome chr6 scaffold_25, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00022102001 PE=4 SV=1 Length = 1015
Score = 132 bits (333), Expect = 8e-30 Identities = 63/69 (91%), Positives = 66/69 (95%) Frame = +1
Query: 316 MSLSGMRGLSVFISDIRNCQNKEQERLLVDKELANIRTRFKNEKGLSVYEKKKYVWKMLY 495 M+LSGMRGLSVFISDIRNCQNKEQERL VDKEL N+RTRFKNEKGL+ YEKKKYVWKMLY Sbjct: 1 MALSGMRGLSVFISDIRNCQNKEQERLRVDKELGNVRTRFKNEKGLTPYEKKKYVWKMLY 60
Query: 496 IYMLGYDVD 522 IYMLGYDVD Sbjct: 61 IYMLGYDVD 69
>tr|A0A924|A0A924_IPOTF Putative uncharacterized protein OS=Ipomoea trifida PE=4 SV=1 Length = 241
Score = 132 bits (333), Expect = 8e-30 Identities = 63/69 (91%), Positives = 66/69 (95%) Frame = +1
Query: 316 MSLSGMRGLSVFISDIRNCQNKEQERLLVDKELANIRTRFKNEKGLSVYEKKKYVWKMLY 495 M+LSGMRGLSVFISDIRNCQNKEQERL VDKEL N+RTRFKNEKGL+ YEKKKYVWKMLY Sbjct: 1 MALSGMRGLSVFISDIRNCQNKEQERLRVDKELGNVRTRFKNEKGLTPYEKKKYVWKMLY 60
Query: 496 IYMLGYDVD 522 IYMLGYDVD Sbjct: 61 IYMLGYDVD 69
>tr|Q10SS6|Q10SS6_ORYSJ Adaptin N terminal region family protein, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os03g02150 PE=4 SV=1 Length = 958
Score = 132 bits (332), Expect = 1e-29 Identities = 64/69 (92%), Positives = 65/69 (94%) Frame = +1
Query: 316 MSLSGMRGLSVFISDIRNCQNKEQERLLVDKELANIRTRFKNEKGLSVYEKKKYVWKMLY 495 M+LSGMRGLSVFISDIRNC NKEQERL VDKEL NIRTRFKNEKGLS YEKKKYVWKMLY Sbjct: 1 MALSGMRGLSVFISDIRNCHNKEQERLRVDKELGNIRTRFKNEKGLSPYEKKKYVWKMLY 60
Query: 496 IYMLGYDVD 522 IYMLGYDVD Sbjct: 61 IYMLGYDVD 69
>tr|Q10SS5|Q10SS5_ORYSJ Adaptin N terminal region family protein, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os03g02150 PE=4 SV=1 Length = 887
Score = 132 bits (332), Expect = 1e-29 Identities = 64/69 (92%), Positives = 65/69 (94%) Frame = +1
Query: 316 MSLSGMRGLSVFISDIRNCQNKEQERLLVDKELANIRTRFKNEKGLSVYEKKKYVWKMLY 495 M+LSGMRGLSVFISDIRNC NKEQERL VDKEL NIRTRFKNEKGLS YEKKKYVWKMLY Sbjct: 1 MALSGMRGLSVFISDIRNCHNKEQERLRVDKELGNIRTRFKNEKGLSPYEKKKYVWKMLY 60
Query: 496 IYMLGYDVD 522 IYMLGYDVD Sbjct: 61 IYMLGYDVD 69
>tr|A3ADE1|A3ADE1_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_008813 PE=4 SV=1 Length = 934
Score = 132 bits (332), Expect = 1e-29 Identities = 64/69 (92%), Positives = 65/69 (94%) Frame = +1
Query: 316 MSLSGMRGLSVFISDIRNCQNKEQERLLVDKELANIRTRFKNEKGLSVYEKKKYVWKMLY 495 M+LSGMRGLSVFISDIRNC NKEQERL VDKEL NIRTRFKNEKGLS YEKKKYVWKMLY Sbjct: 1 MALSGMRGLSVFISDIRNCHNKEQERLRVDKELGNIRTRFKNEKGLSPYEKKKYVWKMLY 60
Query: 496 IYMLGYDVD 522 IYMLGYDVD Sbjct: 61 IYMLGYDVD 69
>tr|A9U4D0|A9U4D0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_228191 PE=4 SV=1 Length = 1055
Score = 128 bits (321), Expect = 2e-28 Identities = 60/69 (86%), Positives = 65/69 (94%) Frame = +1
Query: 316 MSLSGMRGLSVFISDIRNCQNKEQERLLVDKELANIRTRFKNEKGLSVYEKKKYVWKMLY 495 M+LSGMRGLS FISD+RNCQNKE ER VDKELANIRTRFKN+KGL+VYEKKKYVWKMLY Sbjct: 1 MALSGMRGLSTFISDVRNCQNKEAERSRVDKELANIRTRFKNDKGLTVYEKKKYVWKMLY 60
Query: 496 IYMLGYDVD 522 IYMLGYD+D Sbjct: 61 IYMLGYDMD 69
>tr|A9RSM0|A9RSM0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_205228 PE=4 SV=1 Length = 1017
Score = 127 bits (320), Expect = 3e-28 Identities = 60/64 (93%), Positives = 63/64 (98%) Frame = +1
Query: 331 MRGLSVFISDIRNCQNKEQERLLVDKELANIRTRFKNEKGLSVYEKKKYVWKMLYIYMLG 510 MRGLSVFISD+RNCQNKEQER+ VDKELANIRTRFKNE+GLSVYEKKKYVWKMLYIYMLG Sbjct: 1 MRGLSVFISDVRNCQNKEQERVRVDKELANIRTRFKNERGLSVYEKKKYVWKMLYIYMLG 60
Query: 511 YDVD 522 YDVD Sbjct: 61 YDVD 64
>tr|Q9FNI4|Q9FNI4_ARATH Alpha-adaptin OS=Arabidopsis thaliana PE=4 SV=1 Length = 1016
Score = 116 bits (290), Expect = 8e-25 Identities = 55/67 (82%), Positives = 61/67 (91%) Frame = +1
Query: 322 LSGMRGLSVFISDIRNCQNKEQERLLVDKELANIRTRFKNEKGLSVYEKKKYVWKMLYIY 501 ++GMRGLSVFISD+RNCQNKE ERL VDKEL NIRT FKNEK L+ Y+KKKYVWKMLYI+ Sbjct: 1 MTGMRGLSVFISDVRNCQNKEAERLRVDKELGNIRTCFKNEKVLTPYKKKKYVWKMLYIH 60
Query: 502 MLGYDVD 522 MLGYDVD Sbjct: 61 MLGYDVD 67
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