DK958544
Clone id TST39A01NGRL0002_E15
Library
Length 711
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0002_E15. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
CACATACTGACCACCTCCTCCTGGTCCCCGCCTAGAAGAGTTGCCTGCTGTGAGGAGACT
GAGCCATGGCAGCCAGCACAGCCTCCCTCTCATCTGCGACATTCAGTGGGCAGCAGCTGA
ATCCCGTGAATGAATTATCACGCAAGGTGGGAGCCGGTGAGGCTCGCGTGCAGATGATGG
CACCCAAGAAGGCCTCTTCCTCCGGCAGCATCTGGTATGGCGCCGACCGTCCCCTGTACC
TGGGCCCTTTCTCCGGCAGCCCACCGTCGTACTTGACGGGAGAATTCCCTGGAGACTACG
GCTGGGACACCGCTGGGCTGTCGGCGGATCCAGAGACCTTCGCAAAGAACCGGGAGCTGG
AGGTTATCCACTCCAGGTGGGCAATGCTGGGCGCTCTTGGATGCGTCACCCCTGAACTTC
TGGCCAAGAACGGCGTCAAGTTTGGAGAGGCCGTATGGTTCAAGGCGGGCTCACAAATCT
TCGCAGATGGGGGCCTCGACTACCTGGGTAATCCCAGCCTGGTGCACGCTCAAAGCATCC
TAGCCATCTGGGCCTGCCAGGTCATCCTCATGGGCGCCGTGGAGGGCTACCGCGTTGCAG
GCGGGCCCCTGGGTGAGGTGGAGGACCCCATTTACCCGGGCGGCTCCTTCGACCCCTTGG
GTCTGGCCGACGACCCCGAGGCCTTCGCAGAGCTGAAGGTGAAGGAGCTGA
■■Homology search results ■■ -
sp_hit_id P15195
Definition sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum
Align length 201
Score (bit) 401.0
E-value 1.0e-111
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK958544|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0002_E15, 5'
(711 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb... 401 e-111
sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast... 342 2e-93
sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1, chloropl... 341 3e-93
sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl... 339 8e-93
sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chlorop... 338 1e-92
sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplas... 337 3e-92
sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII ty... 337 4e-92
sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloropl... 337 5e-92
sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chlorop... 335 1e-91
sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb... 334 2e-91
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop... 333 4e-91
sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl... 332 9e-91
sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 memb... 332 1e-90
sp|P27490|CB28_PEA Chlorophyll a-b binding protein 8, chloroplas... 332 1e-90
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop... 332 1e-90
sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop... 332 1e-90
sp|P09756|CB23_SOYBN Chlorophyll a-b binding protein 3, chloropl... 332 1e-90
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop... 332 1e-90
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas... 330 5e-90
sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloro... 330 5e-90
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop... 329 1e-89
sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplas... 329 1e-89
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl... 328 1e-89
sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chlorop... 328 2e-89
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop... 328 2e-89
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop... 327 3e-89
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl... 327 4e-89
sp|P12471|CB21_SOYBN Chlorophyll a-b binding protein, chloroplas... 327 4e-89
sp|P04777|CB21_ARATH Chlorophyll a-b binding protein 165/180, ch... 326 7e-89
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro... 326 9e-89

>sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member
F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3
SV=1
Length = 265

Score = 401 bits (1031), Expect = e-111
Identities = 193/201 (96%), Positives = 197/201 (98%)
Frame = +3

Query: 108 GQQLNPVNELSRKVGAGEARVQMMAPKKASSSGSIWYGADRPLYLGPFSGSPPSYLTGEF 287
GQQL PVNELSRKVGAGEARVQMMAPK + SGSIWYG+DRPLYLGPFSGSPPSYL+GEF
Sbjct: 14 GQQLKPVNELSRKVGAGEARVQMMAPKSKAPSGSIWYGSDRPLYLGPFSGSPPSYLSGEF 73

Query: 288 PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKA 467
PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKA
Sbjct: 74 PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKA 133

Query: 468 GSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGS 647
GSQIFA+GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGS
Sbjct: 134 GSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGS 193

Query: 648 FDPLGLADDPEAFAELKVKEL 710
FDPLGLADDPEAFAELKVKEL
Sbjct: 194 FDPLGLADDPEAFAELKVKEL 214


>sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplastic
OS=Physcomitrella patens PE=3 SV=1
Length = 269

Score = 342 bits (876), Expect = 2e-93
Identities = 168/204 (82%), Positives = 183/204 (89%), Gaps = 3/204 (1%)
Frame = +3

Query: 108 GQQL-NPVNELSRKV-GAGEARVQMMAP-KKASSSGSIWYGADRPLYLGPFSGSPPSYLT 278
GQ L PVNELSRKV G EARV M K++ S +IWYGADRP +LGPFSG PSYL
Sbjct: 14 GQSLVKPVNELSRKVLGNVEARVTMRRTVSKSAGSDTIWYGADRPKFLGPFSGETPSYLN 73

Query: 279 GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVW 458
GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 74 GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 133

Query: 459 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 638
FKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DPIYP
Sbjct: 134 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYP 193

Query: 639 GGSFDPLGLADDPEAFAELKVKEL 710
GGSFDPLGLADDP+ FAELKVKE+
Sbjct: 194 GGSFDPLGLADDPDTFAELKVKEI 217



Score = 31.2 bits (69), Expect = 5.8
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = +3

Query: 252 SGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKN 431
+G P +T +D GL+ DP+TFA+ + E+ + R AM G ++
Sbjct: 180 AGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 239

Query: 432 G 434
G
Sbjct: 240 G 240


>sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1,
chloroplastic OS=Oryza sativa subsp. japonica GN=CAB1R
PE=2 SV=2
Length = 265

Score = 341 bits (874), Expect = 3e-93
Identities = 163/189 (86%), Positives = 174/189 (92%), Gaps = 4/189 (2%)
Frame = +3

Query: 156 GEARVQMMA----PKKASSSGSIWYGADRPLYLGPFSGSPPSYLTGEFPGDYGWDTAGLS 323
GEAR+ M PK A+SSGS WYGADR LYLGP SG PPSYLTGEFPGDYGWDTAGLS
Sbjct: 26 GEARITMRKTAAKPKPAASSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 85

Query: 324 ADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDY 503
ADPETFAKNRELEVIHSRWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF++GGLDY
Sbjct: 86 ADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDY 145

Query: 504 LGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEA 683
LGNPSL+HAQSILAIWA QV+LMGAVEGYR+AGGPLGEV DP+YPGG+FDPLGLADDPEA
Sbjct: 146 LGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAGGPLGEVVDPLYPGGAFDPLGLADDPEA 205

Query: 684 FAELKVKEL 710
FAELKVKE+
Sbjct: 206 FAELKVKEI 214


>sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1,
chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1
Length = 262

Score = 339 bits (870), Expect = 8e-93
Identities = 163/193 (84%), Positives = 176/193 (91%), Gaps = 4/193 (2%)
Frame = +3

Query: 144 KVGA-GEARVQM---MAPKKASSSGSIWYGADRPLYLGPFSGSPPSYLTGEFPGDYGWDT 311
KVG+ GE R+ M + K ++SGS WYG DR YLGPFSG PPSYLTGEFPGDYGWDT
Sbjct: 19 KVGSFGEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDT 78

Query: 312 AGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADG 491
AGLSADPETFAKNRELEVIHSRWAMLGALGCV PELL++NGVKFGEAVWFKAGSQIF++G
Sbjct: 79 AGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEG 138

Query: 492 GLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLAD 671
GLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DP+YPGGSFDPLGLAD
Sbjct: 139 GLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAD 198

Query: 672 DPEAFAELKVKEL 710
DPEAFAELKVKEL
Sbjct: 199 DPEAFAELKVKEL 211


>sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9,
chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1
Length = 265

Score = 338 bits (868), Expect = 1e-92
Identities = 162/189 (85%), Positives = 173/189 (91%), Gaps = 4/189 (2%)
Frame = +3

Query: 156 GEARVQMMAP----KKASSSGSIWYGADRPLYLGPFSGSPPSYLTGEFPGDYGWDTAGLS 323
GEARV M K A+SSGS WYG DR LYLGP SG PPSYLTGEFPGDYGWDTAGLS
Sbjct: 26 GEARVTMRKTAAKAKPAASSGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 85

Query: 324 ADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDY 503
ADPETFAKNRELEVIHSRWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF++GGLDY
Sbjct: 86 ADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDY 145

Query: 504 LGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEA 683
LGNPSL+HAQSILAIWACQV+LMGA+EGYRVAGGPLGEV DP+YPGG+FDPLGLADDPEA
Sbjct: 146 LGNPSLIHAQSILAIWACQVVLMGAIEGYRVAGGPLGEVVDPLYPGGTFDPLGLADDPEA 205

Query: 684 FAELKVKEL 710
FA++KVKEL
Sbjct: 206 FADVKVKEL 214


>sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplastic
OS=Zea mays PE=2 SV=1
Length = 265

Score = 337 bits (865), Expect = 3e-92
Identities = 162/189 (85%), Positives = 171/189 (90%), Gaps = 4/189 (2%)
Frame = +3

Query: 156 GEARVQMMAP----KKASSSGSIWYGADRPLYLGPFSGSPPSYLTGEFPGDYGWDTAGLS 323
GEARV M K A++SGS WYG DR LYLGP SG PPSYLTGEFPGDYGWDTAGLS
Sbjct: 26 GEARVTMRKTAAKAKPAAASGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 85

Query: 324 ADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDY 503
ADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF++GGLDY
Sbjct: 86 ADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDY 145

Query: 504 LGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEA 683
LGNPSL+HAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DP+YPGGSFDPLGLADDPEA
Sbjct: 146 LGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEA 205

Query: 684 FAELKVKEL 710
F ELKVKEL
Sbjct: 206 FGELKVKEL 214


>sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII type
I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1
Length = 255

Score = 337 bits (864), Expect = 4e-92
Identities = 162/186 (87%), Positives = 170/186 (91%), Gaps = 1/186 (0%)
Frame = +3

Query: 156 GEARVQMM-APKKASSSGSIWYGADRPLYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADP 332
G A+ M K+ SSGS WYG DR YLGPFSG PPSYLTGEFPGDYGWDTAGLSADP
Sbjct: 19 GNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADP 78

Query: 333 ETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGN 512
ETFAKNRELEVIHSRWAMLGALGCV PELL++NGVKFGEAVWFKAGSQIF++GGLDYLGN
Sbjct: 79 ETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGN 138

Query: 513 PSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEAFAE 692
PSLVHAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DPIYPGGSFDPLGLADDPEAFAE
Sbjct: 139 PSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAE 198

Query: 693 LKVKEL 710
LKVKEL
Sbjct: 199 LKVKEL 204


>sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2,
chloroplastic OS=Oryza sativa subsp. japonica GN=CAB2R
PE=2 SV=2
Length = 261

Score = 337 bits (863), Expect = 5e-92
Identities = 161/188 (85%), Positives = 172/188 (91%), Gaps = 3/188 (1%)
Frame = +3

Query: 156 GEARVQMM---APKKASSSGSIWYGADRPLYLGPFSGSPPSYLTGEFPGDYGWDTAGLSA 326
GE R+ M A K ++SGS WYGADR LYLGP SG PPSYLTGEFPGDYGWDTAGLSA
Sbjct: 23 GEGRITMRKSAAKPKPAASGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSA 82

Query: 327 DPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYL 506
DPETFAKNRELEVIHSRWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF++GGLDYL
Sbjct: 83 DPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYL 142

Query: 507 GNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEAF 686
GNPSL+HAQSILAIWA QV+LMGAVEGYR+AGGPLGEV DP+YPGGSFDPLGLADDPEAF
Sbjct: 143 GNPSLIHAQSILAIWAVQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAF 202

Query: 687 AELKVKEL 710
AELKVKE+
Sbjct: 203 AELKVKEI 210


>sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80,
chloroplastic OS=Pisum sativum GN=AB80 PE=1 SV=1
Length = 269

Score = 335 bits (860), Expect = 1e-91
Identities = 165/202 (81%), Positives = 180/202 (89%), Gaps = 1/202 (0%)
Frame = +3

Query: 108 GQQLNPVNELSRKVGAGEARVQMMAP-KKASSSGSIWYGADRPLYLGPFSGSPPSYLTGE 284
G+QL +N S+++GA ++ A KK +SSGS WYG DR YLGPFSG PSYLTGE
Sbjct: 18 GKQLK-LNPSSQELGAARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGE 76

Query: 285 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFK 464
FPGDYGWDTAGLSADPETF+KNRELEVIHSRWAMLGALGCV PELL++NGVKFGEAVWFK
Sbjct: 77 FPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFK 136

Query: 465 AGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGG 644
AGSQIF++GGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYR+AGGPLGEV DP+YPGG
Sbjct: 137 AGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGG 196

Query: 645 SFDPLGLADDPEAFAELKVKEL 710
SFDPLGLADDPEAFAELKVKEL
Sbjct: 197 SFDPLGLADDPEAFAELKVKEL 218


>sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 member
1B, chloroplastic OS=Pinus sylvestris PE=2 SV=1
Length = 274

Score = 334 bits (857), Expect = 2e-91
Identities = 164/189 (86%), Positives = 172/189 (91%), Gaps = 4/189 (2%)
Frame = +3

Query: 156 GEARVQMM--APKK--ASSSGSIWYGADRPLYLGPFSGSPPSYLTGEFPGDYGWDTAGLS 323
GEARV M KK AS+S S WYG DR LYLGPFSG PPSYLTGEFPGDYGWDTAGLS
Sbjct: 35 GEARVTMRKATTKKLTASASTSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLS 94

Query: 324 ADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDY 503
ADPE FAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAG+QIF++GGLDY
Sbjct: 95 ADPENFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDY 154

Query: 504 LGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEA 683
LGNPSLVHAQSILAIWACQVILMGAVEGYR+AGGPLGEV DPIYPGGSFDPLGLA+DPEA
Sbjct: 155 LGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLAEDPEA 214

Query: 684 FAELKVKEL 710
FAELKVKE+
Sbjct: 215 FAELKVKEI 223



Score = 30.8 bits (68), Expect = 7.6
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +3

Query: 252 SGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKN 431
+G P +T +D GL+ DPE FA+ + E+ + R AM G ++
Sbjct: 186 AGGPLGEVTDPIYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 245

Query: 432 G 434
G
Sbjct: 246 G 246


tr_hit_id A9TL35
Definition tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 198
Score (bit) 356.0
E-value 9.0e-97
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK958544|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0002_E15, 5'
(711 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella paten... 356 9e-97
tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding ... 352 1e-95
tr|A9T914|A9T914_PHYPA Predicted protein OS=Physcomitrella paten... 352 2e-95
tr|A9S6S7|A9S6S7_PHYPA Predicted protein OS=Physcomitrella paten... 350 5e-95
tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein OS=Physco... 350 7e-95
tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella paten... 350 7e-95
tr|A9RT62|A9RT62_PHYPA Predicted protein OS=Physcomitrella paten... 350 7e-95
tr|A9RAS2|A9RAS2_PHYPA Predicted protein OS=Physcomitrella paten... 350 7e-95
tr|A9S6F4|A9S6F4_PHYPA Predicted protein OS=Physcomitrella paten... 347 3e-94
tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella paten... 347 3e-94
tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella paten... 347 4e-94
tr|Q765P6|Q765P6_PHYPA Light-harvesting chlorophyll a/b-binding ... 345 2e-93
tr|A9RBQ3|A9RBQ3_PHYPA Predicted protein OS=Physcomitrella paten... 345 2e-93
tr|Q9M600|Q9M600_EUPES Chlorophyll a/b binding protein OS=Euphor... 344 4e-93
tr|B4FUA1|B4FUA1_MAIZE Chlorophyll a-b binding protein 1 OS=Zea ... 342 1e-92
tr|Q4VV47|Q4VV47_PICSI Chloroplast light harvesting chlorophyll ... 341 2e-92
tr|Q40770|Q40770_PICAB Light harvesting chlorophyll a /b-binding... 341 2e-92
tr|A9RBQ5|A9RBQ5_PHYPA Predicted protein OS=Physcomitrella paten... 341 2e-92
tr|A9NK15|A9NK15_PICSI Putative uncharacterized protein OS=Picea... 341 2e-92
tr|Q0J2G2|Q0J2G2_ORYSJ Os09g0346500 protein OS=Oryza sativa subs... 341 3e-92
tr|B8BEP6|B8BEP6_ORYSI Putative uncharacterized protein OS=Oryza... 341 3e-92
tr|B6T2Y9|B6T2Y9_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ... 341 3e-92
tr|B4FQ80|B4FQ80_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ... 341 3e-92
tr|A9SGM1|A9SGM1_PHYPA Predicted protein OS=Physcomitrella paten... 341 3e-92
tr|Q8W0E6|Q8W0E6_ORYSJ cDNA clone:001-013-E06, full insert seque... 340 4e-92
tr|Q4VV55|Q4VV55_9CONI Chloroplast light harvesting chlorophyll ... 340 4e-92
tr|Q4VV54|Q4VV54_PINLA Chloroplast light harvesting chlorophyll ... 340 4e-92
tr|Q4VV53|Q4VV53_PINMO Chloroplast light harvesting chlorophyll ... 340 4e-92
tr|Q4VV52|Q4VV52_PINST Chloroplast light harvesting chlorophyll ... 340 4e-92
tr|Q40771|Q40771_PICAB Light harvesting chlorophyll a /b-binding... 340 4e-92

>tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_108362 PE=4 SV=1
Length = 263

Score = 356 bits (913), Expect = 9e-97
Identities = 171/198 (86%), Positives = 182/198 (91%)
Frame = +3

Query: 117 LNPVNELSRKVGAGEARVQMMAPKKASSSGSIWYGADRPLYLGPFSGSPPSYLTGEFPGD 296
L PVNELSRKVG EARV M +K+S S SIWYGADRP +LGPFSG PSYL GEF GD
Sbjct: 18 LKPVNELSRKVGTSEARVSM---RKSSGSDSIWYGADRPKFLGPFSGETPSYLNGEFAGD 74

Query: 297 YGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ 476
YGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGCVTPELLAKNGVKFGEAVWFKAG+Q
Sbjct: 75 YGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGAQ 134

Query: 477 IFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDP 656
IF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV DPIYPGGSFDP
Sbjct: 135 IFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVTDPIYPGGSFDP 194

Query: 657 LGLADDPEAFAELKVKEL 710
LGLADDP+ FAELKVKE+
Sbjct: 195 LGLADDPDTFAELKVKEI 212


>tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding
protein 2 (Predicted protein) OS=Physcomitrella patens
subsp. patens GN=PpLhcb2 PE=4 SV=1
Length = 267

Score = 352 bits (903), Expect = 1e-95
Identities = 169/199 (84%), Positives = 182/199 (91%), Gaps = 1/199 (0%)
Frame = +3

Query: 117 LNPVNELSRKVGAGEARVQMMAP-KKASSSGSIWYGADRPLYLGPFSGSPPSYLTGEFPG 293
L PVNELSRKVG+ +ARV M K++ S SIWYGADRP YLGPFSG PSYL GEF G
Sbjct: 18 LKPVNELSRKVGSSQARVTMRRTVNKSAGSDSIWYGADRPKYLGPFSGETPSYLNGEFAG 77

Query: 294 DYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGS 473
DYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGCVTPELLAK+GVKFGEAVWFKAG+
Sbjct: 78 DYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKSGVKFGEAVWFKAGA 137

Query: 474 QIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFD 653
QIF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV DPIYPGGSFD
Sbjct: 138 QIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVTDPIYPGGSFD 197

Query: 654 PLGLADDPEAFAELKVKEL 710
PLGLADDP+ FAELKVKE+
Sbjct: 198 PLGLADDPDTFAELKVKEI 216


>tr|A9T914|A9T914_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_220036 PE=4 SV=1
Length = 263

Score = 352 bits (902), Expect = 2e-95
Identities = 168/198 (84%), Positives = 183/198 (92%)
Frame = +3

Query: 117 LNPVNELSRKVGAGEARVQMMAPKKASSSGSIWYGADRPLYLGPFSGSPPSYLTGEFPGD 296
L PVNELSR+VGA EARV M +K++ S SIWYGADRP +LGPFSG PSYL GEF GD
Sbjct: 18 LKPVNELSRRVGANEARVTM---RKSAGSDSIWYGADRPKFLGPFSGETPSYLNGEFAGD 74

Query: 297 YGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ 476
YGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPELLAK+GVKFGEAVWFKAG+Q
Sbjct: 75 YGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKAGAQ 134

Query: 477 IFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDP 656
IF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV DPIYPGGSFDP
Sbjct: 135 IFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVTDPIYPGGSFDP 194

Query: 657 LGLADDPEAFAELKVKEL 710
LGLADDP+ FAELKVKE+
Sbjct: 195 LGLADDPDTFAELKVKEI 212


>tr|A9S6S7|A9S6S7_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_209208 PE=4 SV=1
Length = 263

Score = 350 bits (898), Expect = 5e-95
Identities = 171/198 (86%), Positives = 181/198 (91%)
Frame = +3

Query: 117 LNPVNELSRKVGAGEARVQMMAPKKASSSGSIWYGADRPLYLGPFSGSPPSYLTGEFPGD 296
L +NELSRKVG +ARV M +KASSS SIWYGADRP YLGP SG PSYLTGEF GD
Sbjct: 18 LKSINELSRKVGNVQARVTM---RKASSSDSIWYGADRPKYLGPLSGETPSYLTGEFAGD 74

Query: 297 YGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ 476
YGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ
Sbjct: 75 YGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ 134

Query: 477 IFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDP 656
IF++GGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRVAGGPLGEV DPIYPGGSFDP
Sbjct: 135 IFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRVAGGPLGEVTDPIYPGGSFDP 194

Query: 657 LGLADDPEAFAELKVKEL 710
LGLADDP+ FAELKVKE+
Sbjct: 195 LGLADDPDTFAELKVKEI 212


>tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein
OS=Physcomitrella patens PE=2 SV=1
Length = 268

Score = 350 bits (897), Expect = 7e-95
Identities = 168/199 (84%), Positives = 182/199 (91%), Gaps = 1/199 (0%)
Frame = +3

Query: 117 LNPVNELSRKVGAGEARVQMMAP-KKASSSGSIWYGADRPLYLGPFSGSPPSYLTGEFPG 293
L PV+ELSRKV AGEARV M K+S S SIWYGADRP +LGPFSG PSYL GEF G
Sbjct: 19 LKPVSELSRKVNAGEARVTMRKTVSKSSGSDSIWYGADRPKFLGPFSGETPSYLNGEFAG 78

Query: 294 DYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGS 473
DYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPELLAK+GVKFGEAVWFKAG+
Sbjct: 79 DYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKAGA 138

Query: 474 QIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFD 653
QIF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG+V DPIYPGGSFD
Sbjct: 139 QIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGDVTDPIYPGGSFD 198

Query: 654 PLGLADDPEAFAELKVKEL 710
PLGLADDP+ FAELKVKE+
Sbjct: 199 PLGLADDPDTFAELKVKEI 217


>tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_219547 PE=4 SV=1
Length = 268

Score = 350 bits (897), Expect = 7e-95
Identities = 168/199 (84%), Positives = 182/199 (91%), Gaps = 1/199 (0%)
Frame = +3

Query: 117 LNPVNELSRKVGAGEARVQMMAP-KKASSSGSIWYGADRPLYLGPFSGSPPSYLTGEFPG 293
L PV+ELSRKV AGEARV M K+S S SIWYGADRP +LGPFSG PSYL GEF G
Sbjct: 19 LKPVSELSRKVNAGEARVTMRKTVSKSSGSDSIWYGADRPKFLGPFSGETPSYLNGEFAG 78

Query: 294 DYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGS 473
DYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPELLAK+GVKFGEAVWFKAG+
Sbjct: 79 DYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKAGA 138

Query: 474 QIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFD 653
QIF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG+V DPIYPGGSFD
Sbjct: 139 QIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGDVTDPIYPGGSFD 198

Query: 654 PLGLADDPEAFAELKVKEL 710
PLGLADDP+ FAELKVKE+
Sbjct: 199 PLGLADDPDTFAELKVKEI 217


>tr|A9RT62|A9RT62_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_105126 PE=4 SV=1
Length = 265

Score = 350 bits (897), Expect = 7e-95
Identities = 168/198 (84%), Positives = 182/198 (91%)
Frame = +3

Query: 117 LNPVNELSRKVGAGEARVQMMAPKKASSSGSIWYGADRPLYLGPFSGSPPSYLTGEFPGD 296
L PVNELSRKVG+ EARV M K S+S SIWYGADRP YLGPFSG PSYLTGEF GD
Sbjct: 18 LKPVNELSRKVGSSEARVTMRRTVK-STSDSIWYGADRPKYLGPFSGETPSYLTGEFAGD 76

Query: 297 YGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ 476
YGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPELLAK+GVKFGEAVWFKAG+Q
Sbjct: 77 YGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKAGAQ 136

Query: 477 IFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDP 656
IF++GGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYRVAGGPLGE+ DPIYPGGSFDP
Sbjct: 137 IFSEGGLDYLGNPSLVHAQSILAIWASQVVLMGAVEGYRVAGGPLGEITDPIYPGGSFDP 196

Query: 657 LGLADDPEAFAELKVKEL 710
LGLADDP+ FAELKVKE+
Sbjct: 197 LGLADDPDTFAELKVKEI 214


>tr|A9RAS2|A9RAS2_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_155384 PE=4 SV=1
Length = 267

Score = 350 bits (897), Expect = 7e-95
Identities = 168/199 (84%), Positives = 182/199 (91%), Gaps = 1/199 (0%)
Frame = +3

Query: 117 LNPVNELSRKVGAGEARVQMMAP-KKASSSGSIWYGADRPLYLGPFSGSPPSYLTGEFPG 293
L PVNELSRKVG EARV M K++ S SIWYGADRP +LGPFSG PSYLTGEF G
Sbjct: 18 LKPVNELSRKVGNVEARVTMRRTVSKSAGSDSIWYGADRPKFLGPFSGETPSYLTGEFAG 77

Query: 294 DYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGS 473
DYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPELLAK+GVKFGEAVWFKAG+
Sbjct: 78 DYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKAGA 137

Query: 474 QIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFD 653
QIF++GGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DPIYPGGSFD
Sbjct: 138 QIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYPGGSFD 197

Query: 654 PLGLADDPEAFAELKVKEL 710
PLGLADDP+ FAELKVKE+
Sbjct: 198 PLGLADDPDTFAELKVKEI 216


>tr|A9S6F4|A9S6F4_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_124625 PE=4 SV=1
Length = 267

Score = 347 bits (891), Expect = 3e-94
Identities = 169/203 (83%), Positives = 183/203 (90%), Gaps = 2/203 (0%)
Frame = +3

Query: 108 GQQL-NPVNELSRKVGAGEARVQMMAP-KKASSSGSIWYGADRPLYLGPFSGSPPSYLTG 281
GQ L PVNELSRKVG EARV M K++ S SIWYGADRP +LGPFSG PSYL G
Sbjct: 14 GQSLVKPVNELSRKVGNVEARVTMRRTVSKSAGSDSIWYGADRPKFLGPFSGETPSYLNG 73

Query: 282 EFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWF 461
EF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPELLAK+GVKFGEAVWF
Sbjct: 74 EFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWF 133

Query: 462 KAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPG 641
KAG+QIF++GGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DPIYPG
Sbjct: 134 KAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYPG 193

Query: 642 GSFDPLGLADDPEAFAELKVKEL 710
GSFDPLGLADDP+ FAELKVKE+
Sbjct: 194 GSFDPLGLADDPDTFAELKVKEI 216


>tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_175594 PE=4 SV=1
Length = 267

Score = 347 bits (891), Expect = 3e-94
Identities = 168/199 (84%), Positives = 182/199 (91%), Gaps = 1/199 (0%)
Frame = +3

Query: 117 LNPVNELSRKVGAGEARVQMM-APKKASSSGSIWYGADRPLYLGPFSGSPPSYLTGEFPG 293
L PVNELSRKVG EARV M + K+++S SIWYGADRP YLGPFSG PSYL GEF G
Sbjct: 18 LKPVNELSRKVGNVEARVSMRKSASKSAASDSIWYGADRPKYLGPFSGETPSYLNGEFAG 77

Query: 294 DYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGS 473
DYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGCVTPELLAK+GVKFGEAVWFKAG+
Sbjct: 78 DYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKSGVKFGEAVWFKAGA 137

Query: 474 QIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFD 653
QIF++GGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRVAGGPLG+V DPIYPGGSFD
Sbjct: 138 QIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRVAGGPLGDVTDPIYPGGSFD 197

Query: 654 PLGLADDPEAFAELKVKEL 710
PLGLADDP+ FAELKVKE+
Sbjct: 198 PLGLADDPDTFAELKVKEI 216