DK958615 |
Clone id |
TST39A01NGRL0002_H14 |
Library |
TST39 |
Length |
645 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0002_H14. 5' end sequence. |
Accession |
DK958615 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL2689Contig1 |
Sequence |
GTGAGGATGTGGACGATGCTGTAGATGAAAATGTTCCTTTACCATCGTCACACAGATCAG ATGTTGCTGCTTCTTTGATCAAGATTCCCAAGGAGGAGGCTGGACTTGATACACACACAA AAAGTCCTGCTTTGAATGACCTCCCTGATACACACACAGAAAGTCCTGCTTTGAATGACC TCCCTCATGTAGAAAGTGTAGATACTGGTACAGAGCTTGATTTGTATATGTTTCTTGACA ATTTTCTCACTGACATTCCAGAGATTACAAGCTTGGAAACAGATATTGTGTCCTCTACTC TTGCTATGGACAGGGTGCAGAGGGGCCAAAGTAACTTCAATTTCAATGAGACACCCGCGG ATGTGGAAAGGCATCTTGGACTTGATGGTACAAATGTGCATGACTTTCTGCACCCCGCTT TAAACGAGGAACAGATATTAGGAGAGTTATTCCAGCTTACTGATGGTAGTCAAGGCCACA CAAGCATGACAGACTTGTCATTTCAATCTCCTCTCTGTACAGACGTTAATCTTTGTTCTG ATGGTGTGGATTCAAATGGTGTCTTTGGTGATTACATTGAGATGGATGATATGGATTCTC CTCTTGACAGTTTTGTGTTGAGATCGCCAAGCTATTATGGTATTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8IW03 |
Definition |
sp|Q8IW03|SIAHL_HUMAN Seven in absentia-like protein FLJ39203 OS=Homo sapiens |
Align length |
88 |
Score (bit) |
33.9 |
E-value |
0.75 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q033M6 |
Definition |
tr|Q033M6|Q033M6_LACC3 Phosphotransferase system, mannitol-specific IIBC component OS=Lactobacillus casei (strain ATCC 334) |
Align length |
127 |
Score (bit) |
36.6 |
E-value |
1.4 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK958615|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0002_H14, 5' (645 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q033M6|Q033M6_LACC3 Phosphotransferase system, mannitol-speci... 37 1.4 tr|B3WBT6|B3WBT6_LACCB Mannitol PTS, EIICB OS=Lactobacillus case... 37 1.4 tr|Q5QZH7|Q5QZH7_IDILO Putative uncharacterized protein OS=Idiom... 36 1.8 tr|Q03X05|Q03X05_LEUMM Transketolase OS=Leuconostoc mesenteroide... 36 2.3 tr|Q6CFZ3|Q6CFZ3_YARLI YALI0B02266p OS=Yarrowia lipolytica GN=YA... 35 3.0 tr|A8UED2|A8UED2_9FLAO Putative uncharacterized protein OS=Flavo... 35 3.0 tr|A9SYW1|A9SYW1_PHYPA Predicted protein OS=Physcomitrella paten... 35 3.9 tr|A3VNX5|A3VNX5_9PROT Oar-like outer membrane protein protein, ... 35 5.1 tr|Q948C0|Q948C0_ORYSA Putative polyprotein OS=Oryza sativa GN=O... 35 5.1 tr|Q33B45|Q33B45_ORYSJ Retrotransposon protein, putative, Ty3-gy... 35 5.1 tr|B4MSX6|B4MSX6_DROWI GK19812 OS=Drosophila willistoni GN=GK198... 34 6.7 tr|B4J3N4|B4J3N4_DROGR GH14782 OS=Drosophila grimshawi GN=GH1478... 34 6.7 tr|A9DID2|A9DID2_9FLAO Putative uncharacterized protein OS=Kordi... 34 6.7 tr|B4MU00|B4MU00_DROWI GK23736 OS=Drosophila willistoni GN=GK237... 34 8.7 tr|B4K2T4|B4K2T4_DROGR GH11772 OS=Drosophila grimshawi GN=GH1177... 34 8.7 tr|B4J149|B4J149_DROGR GH16534 OS=Drosophila grimshawi GN=GH1653... 34 8.7 tr|B3MRS8|B3MRS8_DROAN GF20940 OS=Drosophila ananassae GN=GF2094... 34 8.7 tr|B7ZBP0|B7ZBP0_HUMAN Novel protein similar to seven in absenti... 34 8.7 tr|A6T0L0|A6T0L0_JANMA Uncharacterized conserved protein OS=Jant... 34 8.8 tr|B6LVE6|B6LVE6_BRAFL Putative uncharacterized protein OS=Branc... 34 8.8 tr|B0EK92|B0EK92_ENTDI DENN domain-containing protein 2D, putati... 34 8.8 tr|B6K591|B6K591_SCHJP HECT domain containing protein OS=Schizos... 34 8.8
>tr|Q033M6|Q033M6_LACC3 Phosphotransferase system, mannitol-specific IIBC component OS=Lactobacillus casei (strain ATCC 334) GN=LSEI_2888 PE=4 SV=1 Length = 608
Score = 36.6 bits (83), Expect = 1.4 Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 8/127 (6%) Frame = +3
Query: 57 SDVAASLIKIPKEEAGLDTHTKSPALNDLPDTHTESPALNDLPHVESVDTGTELD---LY 227 S + AS+++ ++AGLD + A+++L D P L + E D + + Sbjct: 407 SAMGASILRDKVKKAGLDLSVTNTAISNLQD----KPGLLVVTQEELADRAKDKTPDAAH 462
Query: 228 MFLDNFLTDIPE----ITSLETDIVSST-LAMDRVQRGQSNFNFNETPADVERHLGLDGT 392 + +DNFL P+ I SL+ + V T AM + ++ ETP D + L LD Sbjct: 463 IAVDNFLNS-PKYDEIIASLKAEAVGGTDEAMPATETSKAK---QETPEDELKELDLDKI 518
Query: 393 NVHDFLH 413 DFLH Sbjct: 519 TEVDFLH 525
>tr|B3WBT6|B3WBT6_LACCB Mannitol PTS, EIICB OS=Lactobacillus casei (strain BL23) GN=pts2CB PE=4 SV=1 Length = 608
Score = 36.6 bits (83), Expect = 1.4 Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 8/127 (6%) Frame = +3
Query: 57 SDVAASLIKIPKEEAGLDTHTKSPALNDLPDTHTESPALNDLPHVESVDTGTELD---LY 227 S + AS+++ ++AGLD + A+++L D P L + E D + + Sbjct: 407 SAMGASILRDKVKKAGLDLSVTNTAISNLQD----KPGLLVVTQEELADRAKDKTPDAAH 462
Query: 228 MFLDNFLTDIPE----ITSLETDIVSST-LAMDRVQRGQSNFNFNETPADVERHLGLDGT 392 + +DNFL P+ I SL+ + V T AM + ++ ETP D + L LD Sbjct: 463 IAVDNFLNS-PKYDEIIASLKAEAVGGTDEAMPATETSKAK---QETPEDELKELDLDKI 518
Query: 393 NVHDFLH 413 DFLH Sbjct: 519 TEVDFLH 525
>tr|Q5QZH7|Q5QZH7_IDILO Putative uncharacterized protein OS=Idiomarina loihiensis GN=IL2614 PE=4 SV=1 Length = 175
Score = 36.2 bits (82), Expect = 1.8 Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 2/100 (2%) Frame = +3
Query: 84 IPKEEAGLDTHTKSPALNDLPDTHTESPALNDLPHVESVDTGTELDLYMFLDNFLT-DIP 260 IPKE LDTH ++P + + D H S LP ++ T + L + +N+L+ DI Sbjct: 30 IPKE---LDTHLETPRIVFVRDKHVNSSWQKVLPTAKNDITAKLIGLQHYPENYLSYDID 86
Query: 261 EITSLE-TDIVSSTLAMDRVQRGQSNFNFNETPADVERHL 377 +TSL+ + V+ ++ Q G N F D + H+ Sbjct: 87 LLTSLDRSSTVNGSVITAAGQTGSINTPFILHDHDTQYHV 126
>tr|Q03X05|Q03X05_LEUMM Transketolase OS=Leuconostoc mesenteroides subsp. mesenteroides (strain ATCC 8293 / NCDO 523) GN=LEUM_1169 PE=4 SV=1 Length = 640
Score = 35.8 bits (81), Expect = 2.3 Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 7/108 (6%) Frame = +3
Query: 3 EDVDDAVD---ENVPLPSSHRSDVAASLIKIPKEEAGLDTHTKSPALNDLPD----THTE 161 +D+ A+D +N LPS+ D+ A + + H K P ++L D + Sbjct: 268 QDLSSALDVDIQNFELPSNLLEDLRAKI-------SNRLLHQKQPLNDELTDYLQFSTKN 320
Query: 162 SPALNDLPHVESVDTGTELDLYMFLDNFLTDIPEITSLETDIVSSTLA 305 + + +LP V G ++ Y+ L NF T +P++ D+V+ST A Sbjct: 321 TVTIPELPTDLKVQAGRKISKYV-LQNFATQLPQLWGGSADLVASTNA 367
>tr|Q6CFZ3|Q6CFZ3_YARLI YALI0B02266p OS=Yarrowia lipolytica GN=YALI0B02266g PE=4 SV=1 Length = 916
Score = 35.4 bits (80), Expect = 3.0 Identities = 14/37 (37%), Positives = 20/37 (54%) Frame = -1
Query: 645 QYHNSLAISTQNCQEENPYHPSQCNHQRHHLNPHHQN 535 Q H A Q Q++ HP Q +H +HH +P HQ+ Sbjct: 29 QQHQQQAQQHQQHQQQQQQHPPQLHHPQHHPHPQHQH 65
>tr|A8UED2|A8UED2_9FLAO Putative uncharacterized protein OS=Flavobacteriales bacterium ALC-1 GN=FBALC1_14752 PE=4 SV=1 Length = 430
Score = 35.4 bits (80), Expect = 3.0 Identities = 22/82 (26%), Positives = 41/82 (50%) Frame = +3
Query: 30 NVPLPSSHRSDVAASLIKIPKEEAGLDTHTKSPALNDLPDTHTESPALNDLPHVESVDTG 209 NV P H S++ ++ ++ KE++ + + A D + T+ P + HVES + Sbjct: 88 NVQTPLPHASNILKAISELKKEDSSFEMYVMLGAWIDCLNAWTDQPVNH---HVESPNNA 144
Query: 210 TELDLYMFLDNFLTDIPEITSL 275 E+D + L N DI +I ++ Sbjct: 145 GEIDRAVSLANQYPDIVKIIAV 166
>tr|A9SYW1|A9SYW1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_85850 PE=4 SV=1 Length = 2105
Score = 35.0 bits (79), Expect = 3.9 Identities = 23/61 (37%), Positives = 26/61 (42%) Frame = -3
Query: 457 SWNNSPNICSSFKAGCRKSCTFVPSSPRCLSTSAGVSXXXXXLWPLCTLSIARVEDTISV 278 SWN SP CS+ G CT P C +T G S W L S VE +SV Sbjct: 1960 SWNRSPQTCSARLLGVVCRCTPTPGGEWCSATRRGTS-----PWALWIGSNPCVEPPLSV 2014
Query: 277 S 275 S Sbjct: 2015 S 2015
>tr|A3VNX5|A3VNX5_9PROT Oar-like outer membrane protein protein, OmpA family protein OS=Parvularcula bermudensis HTCC2503 GN=PB2503_02212 PE=4 SV=1 Length = 945
Score = 34.7 bits (78), Expect = 5.1 Identities = 18/53 (33%), Positives = 27/53 (50%) Frame = +3
Query: 486 MTDLSFQSPLCTDVNLCSDGVDSNGVFGDYIEMDDMDSPLDSFVLRSPSYYGI 644 + D +F DV L S VDS+G +Y+ + + P D FVL PS + + Sbjct: 885 LRDQNFPGNRIVDVALDSGDVDSDGNTNEYVYTNFREDPNDGFVLPEPSLWSV 937
>tr|Q948C0|Q948C0_ORYSA Putative polyprotein OS=Oryza sativa GN=OSJNBa0034A02.11 PE=4 SV=1 Length = 195
Score = 34.7 bits (78), Expect = 5.1 Identities = 34/135 (25%), Positives = 55/135 (40%), Gaps = 3/135 (2%) Frame = +3
Query: 3 EDVDDAVDENVPLPSSHRSDVAASLIKIPKEEAGLDTHTKSPALNDLPDTHTESPALNDL 182 +D+ P P RSD A++ + +E G+ + + + +P+++ Sbjct: 5 DDLATVFGSRAPSPRRPRSDSASTTVGSSSKEVGIILQRLESCSTEEIEEYLNTPSIDSY 64
Query: 183 PHVESVDTGTELDLYMFLDNFLTDIPEITSLETDIVSSTLAMDRVQRGQSNFNFNETPAD 362 E++D G D Y F DNF D + E D D + + FN AD Sbjct: 65 APTETIDYGDFDDEYDF-DNF--DDYDDLDEEFD--------DNYEDDYTPLFFNVFMAD 113
Query: 363 ---VERHLGLDGTNV 398 E+ L +DGTNV Sbjct: 114 NETEEQRLNIDGTNV 128
>tr|Q33B45|Q33B45_ORYSJ Retrotransposon protein, putative, Ty3-gypsy subclass OS=Oryza sativa subsp. japonica GN=LOC_Os10g05270 PE=4 SV=2 Length = 195
Score = 34.7 bits (78), Expect = 5.1 Identities = 34/135 (25%), Positives = 55/135 (40%), Gaps = 3/135 (2%) Frame = +3
Query: 3 EDVDDAVDENVPLPSSHRSDVAASLIKIPKEEAGLDTHTKSPALNDLPDTHTESPALNDL 182 +D+ P P RSD A++ + +E G+ + + + +P+++ Sbjct: 5 DDLATVFGSRAPSPRRPRSDSASTTVGSSSKEVGIILQRLESCSTEEIEEYLNTPSIDSY 64
Query: 183 PHVESVDTGTELDLYMFLDNFLTDIPEITSLETDIVSSTLAMDRVQRGQSNFNFNETPAD 362 E++D G D Y F DNF D + E D D + + FN AD Sbjct: 65 APTETIDYGDFDDEYDF-DNF--DDYDDLDEEFD--------DNYEDDYTPLFFNVFMAD 113
Query: 363 ---VERHLGLDGTNV 398 E+ L +DGTNV Sbjct: 114 NETEEQRLNIDGTNV 128
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